Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805031375/hg6239sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536805031375/hg6239Isup2.hkl |
CCDC reference: 289763
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.005 Å
- R factor = 0.062
- wR factor = 0.176
- Data-to-parameter ratio = 11.9
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT027_ALERT_3_B _diffrn_reflns_theta_full (too) Low ............ 24.98 Deg. PLAT242_ALERT_2_B Check Low Ueq as Compared to Neighbors for N3 PLAT353_ALERT_3_B Long N-H Bond (0.87A) N4 - H4B ... 1.12 Ang.
Alert level C PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.98 PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ? PLAT199_ALERT_1_C Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_C Check the Reported _diffrn_ambient_temperature . 293 K PLAT230_ALERT_2_C Hirshfeld Test Diff for O6 - N3 .. 5.47 su PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for N1 PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.09 PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 5 PLAT480_ALERT_4_C Long H...A H-Bond Reported H8A .. O1 .. 2.74 Ang. PLAT480_ALERT_4_C Long H...A H-Bond Reported H10B .. O2 .. 2.71 Ang.
0 ALERT level A = In general: serious problem 3 ALERT level B = Potentially serious problem 10 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.
C6H14N+·C6H2N3O7− | F(000) = 1376 |
Mr = 328.29 | Dx = 1.458 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 25 reflections |
a = 23.543 (1) Å | θ = 8–20° |
b = 8.7177 (10) Å | µ = 0.12 mm−1 |
c = 18.6177 (14) Å | T = 293 K |
β = 128.484 (10)° | Needle, yellow |
V = 2991.1 (4) Å3 | 0.25 × 0.20 × 0.15 mm |
Z = 8 |
Enraf–Nonius CAD-4 diffractometer | 1489 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.027 |
Graphite monochromator | θmax = 25.0°, θmin = 2.2° |
ω–2θ scans | h = 0→27 |
Absorption correction: ψ scan (North et al., 1968) | k = −10→0 |
Tmin = 0.969, Tmax = 0.998 | l = −22→17 |
2686 measured reflections | 2 standard reflections every 100 reflections |
2619 independent reflections | intensity decay: 1% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.062 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.176 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0687P)2 + 6.4872P] where P = (Fo2 + 2Fc2)/3 |
2619 reflections | (Δ/σ)max < 0.001 |
220 parameters | Δρmax = 0.59 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.01300 (14) | 0.1072 (3) | 0.11314 (16) | 0.0505 (7) | |
O2 | 0.08156 (18) | −0.1469 (3) | 0.2131 (2) | 0.0744 (9) | |
O3 | 0.0937 (2) | −0.1498 (4) | 0.3361 (2) | 0.1055 (14) | |
O4 | 0.19891 (17) | 0.3031 (4) | 0.52475 (19) | 0.0744 (10) | |
O5 | 0.1796 (2) | 0.5228 (4) | 0.4608 (2) | 0.0826 (11) | |
O6 | −0.0015 (3) | 0.5624 (4) | 0.1377 (2) | 0.1238 (18) | |
O7 | −0.0165 (2) | 0.3911 (4) | 0.0511 (2) | 0.1106 (15) | |
N1 | 0.08656 (18) | −0.0815 (4) | 0.2749 (2) | 0.0557 (9) | |
N2 | 0.17171 (18) | 0.3840 (4) | 0.4574 (2) | 0.0540 (9) | |
N3 | 0.01044 (18) | 0.4347 (4) | 0.1262 (2) | 0.0500 (8) | |
C1 | 0.04748 (17) | 0.1693 (4) | 0.1907 (2) | 0.0371 (8) | |
C2 | 0.08688 (18) | 0.0863 (4) | 0.2762 (2) | 0.0378 (8) | |
C3 | 0.12551 (18) | 0.1537 (4) | 0.3612 (2) | 0.0429 (9) | |
H3 | 0.1495 | 0.0937 | 0.4138 | 0.052* | |
C4 | 0.12836 (19) | 0.3119 (4) | 0.3674 (2) | 0.0430 (9) | |
C5 | 0.09054 (18) | 0.4020 (4) | 0.2894 (2) | 0.0422 (9) | |
H5 | 0.0916 | 0.5084 | 0.2941 | 0.051* | |
C6 | 0.05124 (18) | 0.3322 (4) | 0.2048 (2) | 0.0385 (8) | |
N4 | 0.04160 (18) | 0.1747 (4) | −0.0154 (2) | 0.0454 (8) | |
C7 | 0.12270 (18) | 0.1654 (4) | 0.0397 (2) | 0.0408 (9) | |
H7 | 0.1339 | 0.1718 | −0.0028 | 0.049* | |
C8 | 0.1499 (2) | 0.0125 (4) | 0.0887 (2) | 0.0473 (10) | |
H8A | 0.1270 | −0.0701 | 0.0441 | 0.057* | |
H8B | 0.1372 | 0.0012 | 0.1290 | 0.057* | |
C9 | 0.2319 (2) | 0.0027 (5) | 0.1445 (3) | 0.0594 (11) | |
H9A | 0.2440 | 0.0031 | 0.1033 | 0.071* | |
H9B | 0.2491 | −0.0929 | 0.1785 | 0.071* | |
C10 | 0.2696 (2) | 0.1365 (5) | 0.2111 (3) | 0.0609 (12) | |
H10A | 0.2615 | 0.1304 | 0.2561 | 0.073* | |
H10B | 0.3215 | 0.1302 | 0.2433 | 0.073* | |
C11 | 0.2412 (2) | 0.2883 (5) | 0.1607 (3) | 0.0572 (11) | |
H11A | 0.2531 | 0.2983 | 0.1196 | 0.069* | |
H11B | 0.2644 | 0.3717 | 0.2046 | 0.069* | |
C12 | 0.1593 (2) | 0.2992 (4) | 0.1059 (2) | 0.0495 (10) | |
H12B | 0.1474 | 0.2978 | 0.1473 | 0.059* | |
H12C | 0.1418 | 0.3949 | 0.0720 | 0.059* | |
H4A | 0.034 (2) | 0.172 (5) | 0.022 (3) | 0.073 (16)* | |
H4B | 0.020 (3) | 0.072 (6) | −0.061 (4) | 0.107 (17)* | |
H4C | 0.024 (2) | 0.263 (5) | −0.048 (3) | 0.063 (13)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0602 (17) | 0.0483 (15) | 0.0336 (13) | −0.0040 (13) | 0.0245 (13) | 0.0008 (12) |
O2 | 0.086 (2) | 0.0547 (19) | 0.0546 (18) | 0.0137 (17) | 0.0297 (17) | −0.0019 (15) |
O3 | 0.187 (4) | 0.057 (2) | 0.073 (2) | −0.009 (2) | 0.081 (3) | 0.0128 (18) |
O4 | 0.081 (2) | 0.090 (2) | 0.0383 (15) | −0.0088 (18) | 0.0302 (16) | −0.0015 (16) |
O5 | 0.112 (3) | 0.063 (2) | 0.065 (2) | −0.020 (2) | 0.051 (2) | −0.0222 (17) |
O6 | 0.193 (4) | 0.042 (2) | 0.065 (2) | 0.019 (2) | 0.045 (3) | 0.0119 (17) |
O7 | 0.174 (4) | 0.081 (3) | 0.052 (2) | 0.055 (3) | 0.058 (2) | 0.0224 (19) |
N1 | 0.058 (2) | 0.050 (2) | 0.0406 (18) | 0.0015 (17) | 0.0212 (17) | 0.0024 (17) |
N2 | 0.051 (2) | 0.067 (3) | 0.0433 (19) | −0.0060 (18) | 0.0291 (17) | −0.0097 (19) |
N3 | 0.057 (2) | 0.042 (2) | 0.0428 (19) | 0.0068 (16) | 0.0267 (17) | 0.0061 (16) |
C1 | 0.0313 (19) | 0.046 (2) | 0.0326 (19) | 0.0013 (17) | 0.0191 (16) | 0.0025 (16) |
C2 | 0.036 (2) | 0.039 (2) | 0.0381 (19) | 0.0029 (16) | 0.0232 (17) | 0.0046 (16) |
C3 | 0.038 (2) | 0.054 (2) | 0.0343 (18) | 0.0007 (18) | 0.0211 (17) | 0.0058 (18) |
C4 | 0.039 (2) | 0.054 (2) | 0.0357 (19) | −0.0055 (18) | 0.0235 (17) | −0.0059 (17) |
C5 | 0.043 (2) | 0.043 (2) | 0.046 (2) | −0.0031 (17) | 0.0307 (19) | −0.0033 (17) |
C6 | 0.038 (2) | 0.043 (2) | 0.0340 (18) | 0.0031 (17) | 0.0224 (16) | 0.0074 (16) |
N4 | 0.049 (2) | 0.043 (2) | 0.0338 (18) | 0.0053 (17) | 0.0205 (16) | 0.0061 (16) |
C7 | 0.045 (2) | 0.047 (2) | 0.0344 (18) | 0.0019 (18) | 0.0263 (17) | −0.0002 (17) |
C8 | 0.052 (2) | 0.043 (2) | 0.045 (2) | 0.0034 (18) | 0.0293 (19) | 0.0001 (17) |
C9 | 0.054 (3) | 0.058 (3) | 0.062 (3) | 0.010 (2) | 0.034 (2) | 0.002 (2) |
C10 | 0.042 (2) | 0.071 (3) | 0.056 (2) | 0.003 (2) | 0.023 (2) | 0.004 (2) |
C11 | 0.051 (3) | 0.059 (3) | 0.055 (2) | −0.010 (2) | 0.030 (2) | −0.005 (2) |
C12 | 0.055 (3) | 0.045 (2) | 0.042 (2) | 0.0004 (19) | 0.0269 (19) | 0.0001 (18) |
O1—C1 | 1.256 (4) | N4—H4B | 1.11 (6) |
O2—N1 | 1.222 (4) | N4—H4C | 0.91 (5) |
O3—N1 | 1.203 (4) | C7—C8 | 1.514 (5) |
O4—N2 | 1.217 (4) | C7—C12 | 1.515 (5) |
O5—N2 | 1.220 (4) | C7—H7 | 0.9800 |
O6—N3 | 1.200 (4) | C8—C9 | 1.522 (5) |
O7—N3 | 1.182 (4) | C8—H8A | 0.9700 |
N1—C2 | 1.463 (5) | C8—H8B | 0.9700 |
N2—C4 | 1.455 (5) | C9—C10 | 1.522 (6) |
N3—C6 | 1.454 (5) | C9—H9A | 0.9700 |
C1—C6 | 1.438 (5) | C9—H9B | 0.9700 |
C1—C2 | 1.442 (5) | C10—C11 | 1.516 (6) |
C2—C3 | 1.372 (5) | C10—H10A | 0.9700 |
C3—C4 | 1.382 (5) | C10—H10B | 0.9700 |
C3—H3 | 0.9300 | C11—C12 | 1.523 (5) |
C4—C5 | 1.382 (5) | C11—H11A | 0.9700 |
C5—C6 | 1.376 (5) | C11—H11B | 0.9700 |
C5—H5 | 0.9300 | C12—H12B | 0.9700 |
N4—C7 | 1.505 (5) | C12—H12C | 0.9700 |
N4—H4A | 0.82 (5) | ||
O3—N1—O2 | 122.4 (4) | C8—C7—C12 | 112.0 (3) |
O3—N1—C2 | 118.9 (4) | N4—C7—H7 | 108.1 |
O2—N1—C2 | 118.7 (3) | C8—C7—H7 | 108.1 |
O4—N2—O5 | 123.8 (4) | C12—C7—H7 | 108.1 |
O4—N2—C4 | 118.6 (4) | C7—C8—C9 | 110.0 (3) |
O5—N2—C4 | 117.6 (4) | C7—C8—H8A | 109.7 |
O7—N3—O6 | 119.8 (4) | C9—C8—H8A | 109.7 |
O7—N3—C6 | 121.7 (3) | C7—C8—H8B | 109.7 |
O6—N3—C6 | 118.1 (3) | C9—C8—H8B | 109.7 |
O1—C1—C6 | 123.9 (3) | H8A—C8—H8B | 108.2 |
O1—C1—C2 | 124.4 (3) | C8—C9—C10 | 111.3 (3) |
C6—C1—C2 | 111.7 (3) | C8—C9—H9A | 109.4 |
C3—C2—C1 | 124.6 (3) | C10—C9—H9A | 109.4 |
C3—C2—N1 | 116.1 (3) | C8—C9—H9B | 109.4 |
C1—C2—N1 | 119.3 (3) | C10—C9—H9B | 109.4 |
C2—C3—C4 | 119.1 (3) | H9A—C9—H9B | 108.0 |
C2—C3—H3 | 120.4 | C11—C10—C9 | 110.8 (3) |
C4—C3—H3 | 120.4 | C11—C10—H10A | 109.5 |
C5—C4—C3 | 120.9 (3) | C9—C10—H10A | 109.5 |
C5—C4—N2 | 119.7 (4) | C11—C10—H10B | 109.5 |
C3—C4—N2 | 119.4 (3) | C9—C10—H10B | 109.5 |
C6—C5—C4 | 119.0 (4) | H10A—C10—H10B | 108.1 |
C6—C5—H5 | 120.5 | C10—C11—C12 | 110.9 (3) |
C4—C5—H5 | 120.5 | C10—C11—H11A | 109.5 |
C5—C6—C1 | 124.6 (3) | C12—C11—H11A | 109.5 |
C5—C6—N3 | 115.7 (3) | C10—C11—H11B | 109.5 |
C1—C6—N3 | 119.7 (3) | C12—C11—H11B | 109.5 |
C7—N4—H4A | 106 (3) | H11A—C11—H11B | 108.0 |
C7—N4—H4B | 105 (3) | C7—C12—C11 | 109.8 (3) |
H4A—N4—H4B | 113 (4) | C7—C12—H12B | 109.7 |
C7—N4—H4C | 111 (3) | C11—C12—H12B | 109.7 |
H4A—N4—H4C | 110 (4) | C7—C12—H12C | 109.7 |
H4B—N4—H4C | 112 (3) | C11—C12—H12C | 109.7 |
N4—C7—C8 | 109.8 (3) | H12B—C12—H12C | 108.2 |
N4—C7—C12 | 110.6 (3) | ||
O1—C1—C2—C3 | 179.0 (3) | C4—C5—C6—C1 | −1.4 (5) |
C6—C1—C2—C3 | −2.2 (5) | C4—C5—C6—N3 | 177.4 (3) |
O1—C1—C2—N1 | −1.3 (5) | O1—C1—C6—C5 | −178.0 (3) |
C6—C1—C2—N1 | 177.6 (3) | C2—C1—C6—C5 | 3.2 (5) |
O3—N1—C2—C3 | 27.9 (6) | O1—C1—C6—N3 | 3.3 (5) |
O2—N1—C2—C3 | −149.6 (3) | C2—C1—C6—N3 | −175.6 (3) |
O3—N1—C2—C1 | −151.9 (4) | O7—N3—C6—C5 | 168.7 (4) |
O2—N1—C2—C1 | 30.6 (5) | O6—N3—C6—C5 | −18.5 (6) |
C1—C2—C3—C4 | −0.6 (6) | O7—N3—C6—C1 | −12.5 (6) |
N1—C2—C3—C4 | 179.7 (3) | O6—N3—C6—C1 | 160.4 (4) |
C2—C3—C4—C5 | 2.7 (6) | N4—C7—C8—C9 | 180.0 (3) |
C2—C3—C4—N2 | −177.4 (3) | C12—C7—C8—C9 | −56.8 (4) |
O4—N2—C4—C5 | 173.1 (4) | C7—C8—C9—C10 | 55.6 (4) |
O5—N2—C4—C5 | −8.1 (6) | C8—C9—C10—C11 | −56.2 (5) |
O4—N2—C4—C3 | −6.8 (5) | C9—C10—C11—C12 | 56.7 (5) |
O5—N2—C4—C3 | 172.0 (4) | N4—C7—C12—C11 | −179.8 (3) |
C3—C4—C5—C6 | −1.8 (5) | C8—C7—C12—C11 | 57.3 (4) |
N2—C4—C5—C6 | 178.4 (3) | C10—C11—C12—C7 | −56.8 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4A···O1 | 0.82 (5) | 2.12 (5) | 2.921 (5) | 166 (4) |
N4—H4A···O7 | 0.82 (5) | 2.48 (5) | 3.011 (5) | 124 (4) |
N4—H4B···O1i | 1.11 (6) | 1.75 (6) | 2.844 (4) | 168 (4) |
N4—H4B···O2i | 1.11 (6) | 2.40 (5) | 2.955 (4) | 109 (3) |
N4—H4C···O6ii | 0.91 (5) | 2.07 (5) | 2.942 (5) | 162 (4) |
C8—H8A···O1i | 0.97 | 2.74 | 3.462 (5) | 131 |
C7—H7···O3iii | 0.98 | 2.53 | 3.410 (5) | 150 |
C10—H10B···O2iv | 0.97 | 2.71 | 3.417 (5) | 130 |
Symmetry codes: (i) −x, −y, −z; (ii) −x, −y+1, −z; (iii) x, −y, z−1/2; (iv) −x+1/2, y+1/2, −z+1/2. |
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