Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807027067/hy2062sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807027067/hy2062Isup2.hkl |
CCDC reference: 654723
Key indicators
- Single-crystal X-ray study
- T = 292 K
- Mean (C-C) = 0.004 Å
- R factor = 0.033
- wR factor = 0.091
- Data-to-parameter ratio = 14.2
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C3 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C13
Alert level G PLAT794_ALERT_5_G Check Predicted Bond Valency for Zn1 (2) 1.94
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
For general background, see: Eddaoudi et al. (2001). For related structures, see: Chen & Liu (2002); Groeneman et al. (1999); Li et al. (2006).
Compound (I) was prepared from a mixture of Zn(NO3)2.6H2O (0.119 g, 0.4 mmol), isophthalic acid (0.134 g, 0.8 mmol), bpy (0.070 g, 0.4 mmol) and H2O (18 ml) in a 30 ml Teflon-lined autoclave under autogenous pressure at 423 K for 7 d. After cooling to room temperature, colorless crystals suitable for X-ray structure analysis were obtained. Analysis, calculated for C26H18N2O8Zn: C 64.7, H 2.7, N 5.8%; found: C 64.5, H 2.6, N 5.7%.
All H atoms on C atoms were positioned geometrically and refined as riding atoms, with C—H= 0.93Å and Uiso(H) = 1.2Ueq(C) and with O—H = 0.82Å and Uiso(H) = 1.5Ueq(O).
Metal-organic complexes with a variety of supramolecular architectures have attracted increasing interest because of their novel topologies and potential applications as functional materials (Eddaoudi et al., 2001). Recently, a successful strategy for preparing these materials has been the assembly reaction between transition metal ions and two types of ligands, one acts as a terminal ligand and the other acts as a bridging ligand. In this respect, diverse dicarboxylates with various oriented carboxyl groups have been utilized to build coordination polymers. These ligands are able to bridge metal centers in different modes and also produce either linear or zigzag polymeric chains (Chen & Liu, 2002; Groeneman et al., 1999; Li et al., 2006). In this work, we use isophthalic acid as a terminal ligand and 4,4'-bipyridine (bpy) as a bridging ligand, generating a new compound, (I), under hydrothermal condition.
Selected bond lengths and angles for (I) are given in Table 1. In compound (I), the ZnII atom lying on a twofold rotation axis is six-coordinated by two N atoms from two bpy ligands, and two carboxylate groups, each in a chelating mode, from two isophthalate ligands (Fig. 1). The bpy ligand located on an inversion center bridges the ZnII atoms, forming a one-dimensional zigzag chain structure. It is noteworthy that there exist π-π interactions, with the shortest atom-to-atom distance of 3.41 (1) Å, and O—H···O hydrogen bonds (Table 2, Fig. 2) between the isophthalate ligands in the neighboring chains, which lead to a three-dimensional supramolecular network.
For general background, see: Eddaoudi et al. (2001). For related structures, see: Chen & Liu (2002); Groeneman et al. (1999); Li et al. (2006).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2001); software used to prepare material for publication: SHELXTL.
[Zn(C8H5O4)2(C10H8N2)] | F(000) = 1128 |
Mr = 551.79 | Dx = 1.520 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2132 reflections |
a = 20.940 (3) Å | θ = 2.4–26.1° |
b = 9.6078 (12) Å | µ = 1.07 mm−1 |
c = 14.7942 (19) Å | T = 292 K |
β = 125.884 (2)° | Block, colorless |
V = 2411.4 (6) Å3 | 0.12 × 0.09 × 0.05 mm |
Z = 4 |
Bruker SMART APEX CCD area-detector diffractometer | 2385 independent reflections |
Radiation source: fine-focus sealed tube | 2096 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.041 |
φ and ω scans | θmax = 26.1°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −25→24 |
Tmin = 0.890, Tmax = 0.951 | k = −11→11 |
6569 measured reflections | l = −18→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.091 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0583P)2] where P = (Fo2 + 2Fc2)/3 |
2385 reflections | (Δ/σ)max < 0.001 |
168 parameters | Δρmax = 0.39 e Å−3 |
0 restraints | Δρmin = −0.40 e Å−3 |
[Zn(C8H5O4)2(C10H8N2)] | V = 2411.4 (6) Å3 |
Mr = 551.79 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 20.940 (3) Å | µ = 1.07 mm−1 |
b = 9.6078 (12) Å | T = 292 K |
c = 14.7942 (19) Å | 0.12 × 0.09 × 0.05 mm |
β = 125.884 (2)° |
Bruker SMART APEX CCD area-detector diffractometer | 2385 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2096 reflections with I > 2σ(I) |
Tmin = 0.890, Tmax = 0.951 | Rint = 0.041 |
6569 measured reflections |
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.091 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.39 e Å−3 |
2385 reflections | Δρmin = −0.40 e Å−3 |
168 parameters |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.5000 | 0.12559 (3) | 0.7500 | 0.03382 (14) | |
C2 | 0.32554 (15) | −0.1920 (3) | 0.64815 (19) | 0.0543 (6) | |
H2A | 0.3122 | −0.2483 | 0.6859 | 0.065* | |
O2 | 0.39232 (9) | 0.29538 (15) | 0.71869 (12) | 0.0433 (4) | |
O1 | 0.49428 (9) | 0.19702 (15) | 0.86982 (13) | 0.0461 (4) | |
C5 | 0.36932 (14) | −0.0250 (2) | 0.54810 (19) | 0.0533 (6) | |
H5A | 0.3839 | 0.0327 | 0.5125 | 0.064* | |
O4 | 0.25572 (10) | 0.67575 (18) | 0.91871 (14) | 0.0606 (5) | |
H4 | 0.2165 | 0.7250 | 0.8809 | 0.091* | |
O3 | 0.22568 (15) | 0.6223 (2) | 0.75308 (18) | 0.1004 (9) | |
N1 | 0.40947 (9) | −0.01606 (16) | 0.65816 (14) | 0.0362 (4) | |
C3 | 0.28368 (11) | −0.20154 (19) | 0.53335 (16) | 0.0338 (4) | |
C10 | 0.38715 (12) | 0.5013 (2) | 1.02708 (18) | 0.0437 (5) | |
H10A | 0.3772 | 0.5512 | 1.0714 | 0.052* | |
C13 | 0.26886 (15) | 0.6106 (2) | 0.8536 (2) | 0.0487 (6) | |
C6 | 0.43472 (12) | 0.27635 (19) | 0.82190 (17) | 0.0357 (4) | |
C12 | 0.46543 (13) | 0.3362 (2) | 1.00919 (18) | 0.0423 (5) | |
H12A | 0.5082 | 0.2756 | 1.0425 | 0.051* | |
C7 | 0.41740 (12) | 0.35150 (19) | 0.89450 (17) | 0.0339 (4) | |
C8 | 0.35402 (12) | 0.4413 (2) | 0.84621 (17) | 0.0381 (5) | |
H8A | 0.3213 | 0.4514 | 0.7691 | 0.046* | |
C9 | 0.33852 (12) | 0.5171 (2) | 0.91158 (18) | 0.0396 (5) | |
C11 | 0.44993 (14) | 0.4114 (3) | 1.07490 (19) | 0.0494 (6) | |
H11A | 0.4825 | 0.4005 | 1.1520 | 0.059* | |
C4 | 0.30732 (15) | −0.1149 (2) | 0.4840 (2) | 0.0531 (6) | |
H4A | 0.2813 | −0.1172 | 0.4071 | 0.064* | |
C1 | 0.38671 (15) | −0.0992 (3) | 0.70599 (19) | 0.0542 (6) | |
H1A | 0.4137 | −0.0944 | 0.7830 | 0.065* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0357 (2) | 0.0348 (2) | 0.0313 (2) | 0.000 | 0.01984 (17) | 0.000 |
C2 | 0.0657 (15) | 0.0592 (14) | 0.0373 (12) | −0.0254 (12) | 0.0298 (12) | −0.0015 (11) |
O2 | 0.0557 (9) | 0.0459 (8) | 0.0385 (8) | −0.0018 (7) | 0.0334 (8) | −0.0011 (6) |
O1 | 0.0466 (9) | 0.0489 (8) | 0.0476 (9) | 0.0067 (7) | 0.0303 (8) | −0.0040 (7) |
C5 | 0.0570 (14) | 0.0655 (15) | 0.0377 (12) | −0.0221 (12) | 0.0278 (12) | −0.0006 (11) |
O4 | 0.0575 (10) | 0.0744 (11) | 0.0521 (11) | 0.0161 (9) | 0.0334 (9) | −0.0125 (9) |
O3 | 0.126 (2) | 0.138 (2) | 0.0536 (13) | 0.0874 (16) | 0.0614 (14) | 0.0386 (13) |
N1 | 0.0377 (9) | 0.0369 (8) | 0.0344 (9) | −0.0025 (7) | 0.0214 (8) | −0.0009 (7) |
C3 | 0.0372 (10) | 0.0340 (10) | 0.0331 (10) | −0.0006 (8) | 0.0223 (9) | −0.0016 (8) |
C10 | 0.0488 (12) | 0.0509 (12) | 0.0411 (12) | −0.0074 (10) | 0.0317 (11) | −0.0121 (10) |
C13 | 0.0633 (16) | 0.0489 (13) | 0.0509 (15) | 0.0122 (11) | 0.0430 (14) | 0.0060 (10) |
C6 | 0.0414 (11) | 0.0325 (9) | 0.0422 (12) | −0.0063 (8) | 0.0295 (10) | −0.0051 (8) |
C12 | 0.0412 (12) | 0.0483 (11) | 0.0391 (12) | 0.0013 (9) | 0.0245 (11) | −0.0001 (10) |
C7 | 0.0370 (11) | 0.0344 (10) | 0.0360 (11) | −0.0056 (8) | 0.0246 (10) | −0.0030 (8) |
C8 | 0.0442 (11) | 0.0422 (11) | 0.0341 (11) | −0.0004 (9) | 0.0265 (10) | −0.0002 (9) |
C9 | 0.0460 (12) | 0.0400 (11) | 0.0423 (12) | −0.0028 (9) | 0.0312 (11) | −0.0027 (9) |
C11 | 0.0483 (13) | 0.0661 (14) | 0.0313 (11) | −0.0030 (11) | 0.0218 (11) | −0.0053 (10) |
C4 | 0.0581 (15) | 0.0672 (15) | 0.0321 (12) | −0.0238 (12) | 0.0253 (12) | −0.0059 (10) |
C1 | 0.0599 (15) | 0.0638 (15) | 0.0282 (11) | −0.0242 (12) | 0.0199 (11) | −0.0054 (10) |
Zn1—O1i | 1.9689 (15) | C3—C4 | 1.377 (3) |
Zn1—O1 | 1.9689 (15) | C3—C3ii | 1.483 (4) |
Zn1—N1 | 2.0669 (16) | C10—C11 | 1.373 (3) |
Zn1—N1i | 2.0669 (16) | C10—C9 | 1.393 (3) |
Zn1—O2 | 2.5953 (15) | C10—H10A | 0.9300 |
C2—C1 | 1.372 (3) | C13—C9 | 1.485 (3) |
C2—C3 | 1.384 (3) | C6—C7 | 1.504 (3) |
C2—H2A | 0.9300 | C12—C7 | 1.383 (3) |
O2—C6 | 1.251 (2) | C12—C11 | 1.394 (3) |
O1—C6 | 1.266 (2) | C12—H12A | 0.9300 |
C5—N1 | 1.327 (3) | C7—C8 | 1.380 (3) |
C5—C4 | 1.374 (3) | C8—C9 | 1.392 (3) |
C5—H5A | 0.9300 | C8—H8A | 0.9300 |
O4—C13 | 1.307 (3) | C11—H11A | 0.9300 |
O4—H4 | 0.8200 | C4—H4A | 0.9300 |
O3—C13 | 1.210 (3) | C1—H1A | 0.9300 |
N1—C1 | 1.327 (3) | ||
O1i—Zn1—O1 | 139.21 (9) | O3—C13—O4 | 122.2 (2) |
O1i—Zn1—N1 | 98.86 (6) | O3—C13—C9 | 122.7 (2) |
O1—Zn1—N1 | 107.76 (6) | O4—C13—C9 | 115.1 (2) |
O1i—Zn1—N1i | 107.76 (6) | O2—C6—O1 | 122.22 (18) |
O1—Zn1—N1i | 98.86 (6) | O2—C6—C7 | 120.39 (18) |
N1—Zn1—N1i | 97.64 (9) | O1—C6—C7 | 117.37 (18) |
O1—Zn1—O2 | 55.71 (5) | C7—C12—C11 | 120.1 (2) |
O1i—Zn1—O2 | 97.19 (5) | C7—C12—H12A | 119.9 |
N1—Zn1—O2 | 86.01 (6) | C11—C12—H12A | 119.9 |
N1i—Zn1—O2 | 153.80 (6) | C8—C7—C12 | 119.26 (18) |
O2i—Zn1—O2 | 102.11 (6) | C8—C7—C6 | 119.45 (18) |
C1—C2—C3 | 119.8 (2) | C12—C7—C6 | 121.25 (19) |
C1—C2—H2A | 120.1 | C7—C8—C9 | 120.82 (19) |
C3—C2—H2A | 120.1 | C7—C8—H8A | 119.6 |
C6—O1—Zn1 | 105.40 (13) | C9—C8—H8A | 119.6 |
N1—C5—C4 | 123.4 (2) | C8—C9—C10 | 119.66 (19) |
N1—C5—H5A | 118.3 | C8—C9—C13 | 117.70 (19) |
C4—C5—H5A | 118.3 | C10—C9—C13 | 122.63 (19) |
C13—O4—H4 | 109.5 | C10—C11—C12 | 120.7 (2) |
C5—N1—C1 | 116.62 (18) | C10—C11—H11A | 119.6 |
C5—N1—Zn1 | 121.76 (14) | C12—C11—H11A | 119.6 |
C1—N1—Zn1 | 121.57 (14) | C5—C4—C3 | 120.1 (2) |
C4—C3—C2 | 116.42 (19) | C5—C4—H4A | 119.9 |
C4—C3—C3ii | 121.6 (2) | C3—C4—H4A | 119.9 |
C2—C3—C3ii | 122.0 (2) | N1—C1—C2 | 123.7 (2) |
C11—C10—C9 | 119.43 (19) | N1—C1—H1A | 118.2 |
C11—C10—H10A | 120.3 | C2—C1—H1A | 118.2 |
C9—C10—H10A | 120.3 |
Symmetry codes: (i) −x+1, y, −z+3/2; (ii) −x+1/2, −y−1/2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4···O2iii | 0.82 | 1.97 | 2.771 (3) | 165 |
Symmetry code: (iii) −x+1/2, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C8H5O4)2(C10H8N2)] |
Mr | 551.79 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 292 |
a, b, c (Å) | 20.940 (3), 9.6078 (12), 14.7942 (19) |
β (°) | 125.884 (2) |
V (Å3) | 2411.4 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.07 |
Crystal size (mm) | 0.12 × 0.09 × 0.05 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.890, 0.951 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6569, 2385, 2096 |
Rint | 0.041 |
(sin θ/λ)max (Å−1) | 0.618 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.091, 1.04 |
No. of reflections | 2385 |
No. of parameters | 168 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.39, −0.40 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 2001), SHELXTL.
Zn1—O1 | 1.9689 (15) | Zn1—O2 | 2.5953 (15) |
Zn1—N1 | 2.0669 (16) | ||
O1i—Zn1—O1 | 139.21 (9) | O1i—Zn1—O2 | 97.19 (5) |
O1—Zn1—N1 | 107.76 (6) | N1—Zn1—O2 | 86.01 (6) |
O1—Zn1—N1i | 98.86 (6) | N1i—Zn1—O2 | 153.80 (6) |
N1—Zn1—N1i | 97.64 (9) | O2i—Zn1—O2 | 102.11 (6) |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4···O2ii | 0.820 | 1.97 | 2.771 (3) | 165 |
Symmetry code: (ii) −x+1/2, y+1/2, −z+3/2. |
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Metal-organic complexes with a variety of supramolecular architectures have attracted increasing interest because of their novel topologies and potential applications as functional materials (Eddaoudi et al., 2001). Recently, a successful strategy for preparing these materials has been the assembly reaction between transition metal ions and two types of ligands, one acts as a terminal ligand and the other acts as a bridging ligand. In this respect, diverse dicarboxylates with various oriented carboxyl groups have been utilized to build coordination polymers. These ligands are able to bridge metal centers in different modes and also produce either linear or zigzag polymeric chains (Chen & Liu, 2002; Groeneman et al., 1999; Li et al., 2006). In this work, we use isophthalic acid as a terminal ligand and 4,4'-bipyridine (bpy) as a bridging ligand, generating a new compound, (I), under hydrothermal condition.
Selected bond lengths and angles for (I) are given in Table 1. In compound (I), the ZnII atom lying on a twofold rotation axis is six-coordinated by two N atoms from two bpy ligands, and two carboxylate groups, each in a chelating mode, from two isophthalate ligands (Fig. 1). The bpy ligand located on an inversion center bridges the ZnII atoms, forming a one-dimensional zigzag chain structure. It is noteworthy that there exist π-π interactions, with the shortest atom-to-atom distance of 3.41 (1) Å, and O—H···O hydrogen bonds (Table 2, Fig. 2) between the isophthalate ligands in the neighboring chains, which lead to a three-dimensional supramolecular network.