



Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807026244/kp2111sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536807026244/kp2111Isup2.hkl |
CCDC reference: 654866
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean
(C-C) = 0.002 Å
- R factor = 0.038
- wR factor = 0.099
- Data-to-parameter ratio = 12.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.92 Ratio PLAT230_ALERT_2_C Hirshfeld Test Diff for N14 - C14 .. 6.33 su
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
This is a part of our studies of intermolecular interactions on 4-nitroimidazole derivatives (Kubicki, 2004). The crystal structures of other 1-aryl-2-methyl-4-nitroimidazoles were described by Kowalski (1995, 1996), Kubicki (2004) and Kubicki & Wagner (2007). For related literature, see: Suwiński et al. (1993).
The title compound has been synthesized by aromatic nucleophilic substitution by 4(5)-nitro-2-methylimidazole to 4-fluoronitrobenzene catalysed by sodium hydroxide [Suwiński et al., (1993)].
Hydrogen atoms were freely refined, and then, for the last cycles of refinement, both the refined geometry and displacement parameters were restrained to keep the refined values.
Simple 4-nitroimidzoles are convenient compounds for studying weak interactions in molecular crystals. The molecules are relatively simple, with few degrees of conformational freedom, and the appropriate choice of substituents can highlight certain kind of interaction. Here, in 1-(4-nitrophenyl)-2-methyl-4-nitroimidazole the available specific interactions range from π-π interactions, through weak hydrogen bonds to nitro-nitro interactions. It turned out that the crystal packing is determined by relatively short and directional C—H···N and C—H···O hydrogen bonds. The first level of organization is the centrosymmetric C—H···O bonded dimer. These dimers are connected by C—H···N hydrogen bonds along [001] direction producing the tapes which are connected into two-dimensional network in the bc plane. The plane of imidazole ring makes the angle of 57.89° with the benzene ring.
This is a part of our studies of intermolecular interactions on 4-nitroimidazole derivatives (Kubicki, 2004). The crystal structures of other 1-aryl-2-methyl-4-nitroimidazoles were described by Kowalski (1995, 1996), Kubicki (2004) and Kubicki & Wagner (2007). For related literature, see: Suwiński et al. (1993).
Data collection: CrysAlis CCD (Oxford Diffraction, 2007); cell refinement: CrysAlis RED (Oxford Diffraction, 2007); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: Stereochemical Workstation Operation Manual (Siemens, 1989); software used to prepare material for publication: SHELXL97.
C10H8N4O4 | F(000) = 1024 |
Mr = 248.20 | Dx = 1.533 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 3523 reflections |
a = 8.1416 (9) Å | θ = 4–22° |
b = 12.7121 (10) Å | µ = 0.12 mm−1 |
c = 20.7789 (13) Å | T = 100 K |
V = 2150.6 (3) Å3 | Needle, colourless |
Z = 8 | 0.4 × 0.15 × 0.05 mm |
Kuma KM-4-CCD four-circle diffractometer | 2092 independent reflections |
Radiation source: fine-focus sealed tube | 1442 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.054 |
ω scan | θmax = 26.0°, θmin = 3.2° |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | h = −9→10 |
Tmin = 0.918, Tmax = 1.000 | k = −15→14 |
11596 measured reflections | l = −25→25 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.099 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0481P)2 + 0.1988P] where P = (Fo2 + 2Fc2)/3 |
2092 reflections | (Δ/σ)max = 0.001 |
163 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C10H8N4O4 | V = 2150.6 (3) Å3 |
Mr = 248.20 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 8.1416 (9) Å | µ = 0.12 mm−1 |
b = 12.7121 (10) Å | T = 100 K |
c = 20.7789 (13) Å | 0.4 × 0.15 × 0.05 mm |
Kuma KM-4-CCD four-circle diffractometer | 2092 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | 1442 reflections with I > 2σ(I) |
Tmin = 0.918, Tmax = 1.000 | Rint = 0.054 |
11596 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.099 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.23 e Å−3 |
2092 reflections | Δρmin = −0.24 e Å−3 |
163 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.88142 (17) | 0.07302 (11) | 0.63572 (7) | 0.0169 (4) | |
C11 | 0.7321 (2) | 0.09541 (14) | 0.60164 (8) | 0.0157 (4) | |
C12 | 0.5883 (2) | 0.11064 (14) | 0.63618 (9) | 0.0179 (4) | |
H12 | 0.5884 | 0.1074 | 0.6814 | 0.022* | |
C13 | 0.4431 (2) | 0.13081 (13) | 0.60316 (9) | 0.0190 (4) | |
H13 | 0.3489 | 0.1428 | 0.6262 | 0.013* | |
C14 | 0.4484 (2) | 0.13426 (13) | 0.53655 (9) | 0.0166 (4) | |
N14 | 0.29294 (19) | 0.14829 (11) | 0.50133 (8) | 0.0205 (4) | |
O141 | 0.29927 (17) | 0.16023 (10) | 0.44276 (6) | 0.0265 (3) | |
O142 | 0.16320 (16) | 0.14491 (10) | 0.53195 (7) | 0.0287 (4) | |
C15 | 0.5904 (2) | 0.12051 (13) | 0.50162 (9) | 0.0171 (4) | |
H15 | 0.5864 | 0.1234 | 0.4579 | 0.018* | |
C16 | 0.7355 (2) | 0.10102 (14) | 0.53454 (8) | 0.0176 (4) | |
H16 | 0.8411 | 0.0954 | 0.5120 | 0.025* | |
C2 | 0.9542 (2) | 0.13460 (13) | 0.68233 (9) | 0.0172 (4) | |
C21 | 0.8855 (2) | 0.23579 (14) | 0.70574 (9) | 0.0204 (4) | |
H21A | 0.8362 | 0.2761 | 0.6711 | 0.051* | |
H21B | 0.9711 | 0.2734 | 0.7232 | 0.036* | |
H21C | 0.8029 | 0.2243 | 0.7389 | 0.028* | |
N3 | 1.09046 (17) | 0.09022 (12) | 0.70367 (7) | 0.0174 (3) | |
C4 | 1.1017 (2) | −0.00159 (14) | 0.66976 (8) | 0.0160 (4) | |
N4 | 1.23301 (18) | −0.07395 (12) | 0.68067 (7) | 0.0200 (4) | |
O41 | 1.32853 (17) | −0.05715 (11) | 0.72537 (6) | 0.0293 (4) | |
O42 | 1.24362 (16) | −0.15076 (10) | 0.64383 (6) | 0.0258 (3) | |
C5 | 0.9775 (2) | −0.01455 (14) | 0.62716 (8) | 0.0184 (4) | |
H5 | 0.9442 | −0.0686 | 0.5998 | 0.019* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0150 (8) | 0.0190 (8) | 0.0167 (8) | −0.0009 (6) | 0.0001 (6) | 0.0012 (6) |
C11 | 0.0159 (9) | 0.0134 (9) | 0.0177 (9) | −0.0014 (7) | −0.0023 (8) | 0.0006 (8) |
C12 | 0.0179 (9) | 0.0220 (10) | 0.0138 (9) | −0.0015 (8) | −0.0004 (8) | 0.0009 (8) |
C13 | 0.0169 (10) | 0.0185 (10) | 0.0216 (10) | −0.0025 (7) | 0.0054 (8) | −0.0007 (8) |
C14 | 0.0145 (9) | 0.0134 (9) | 0.0219 (10) | −0.0012 (7) | −0.0063 (8) | 0.0000 (8) |
N14 | 0.0214 (9) | 0.0147 (8) | 0.0255 (9) | −0.0013 (6) | −0.0036 (7) | 0.0008 (7) |
O141 | 0.0332 (9) | 0.0256 (8) | 0.0207 (7) | −0.0006 (6) | −0.0100 (6) | 0.0030 (6) |
O142 | 0.0209 (7) | 0.0293 (8) | 0.0360 (9) | −0.0005 (6) | −0.0024 (7) | 0.0065 (7) |
C15 | 0.0224 (10) | 0.0146 (9) | 0.0143 (9) | −0.0033 (8) | −0.0016 (8) | 0.0010 (7) |
C16 | 0.0187 (9) | 0.0158 (10) | 0.0181 (10) | −0.0018 (7) | 0.0020 (8) | 0.0000 (8) |
C2 | 0.0191 (10) | 0.0174 (9) | 0.0151 (9) | −0.0046 (7) | 0.0016 (8) | 0.0006 (8) |
C21 | 0.0188 (10) | 0.0218 (10) | 0.0206 (10) | −0.0026 (8) | −0.0009 (8) | −0.0025 (8) |
N3 | 0.0190 (8) | 0.0193 (8) | 0.0141 (8) | −0.0037 (7) | −0.0001 (6) | 0.0007 (6) |
C4 | 0.0144 (9) | 0.0171 (9) | 0.0165 (10) | −0.0007 (7) | 0.0015 (8) | 0.0017 (7) |
N4 | 0.0186 (8) | 0.0223 (9) | 0.0192 (8) | −0.0031 (7) | 0.0000 (7) | 0.0019 (7) |
O41 | 0.0266 (8) | 0.0300 (8) | 0.0312 (8) | 0.0016 (6) | −0.0140 (7) | −0.0031 (6) |
O42 | 0.0278 (8) | 0.0229 (7) | 0.0266 (8) | 0.0022 (6) | 0.0009 (6) | −0.0056 (6) |
C5 | 0.0232 (10) | 0.0157 (9) | 0.0162 (9) | −0.0005 (8) | 0.0018 (8) | −0.0008 (8) |
N1—C5 | 1.372 (2) | C15—H15 | 0.9093 |
N1—C2 | 1.379 (2) | C16—H16 | 0.9824 |
N1—C11 | 1.436 (2) | C2—N3 | 1.321 (2) |
C11—C12 | 1.387 (2) | C2—C21 | 1.485 (2) |
C11—C16 | 1.396 (2) | C21—H21A | 0.9710 |
C12—C13 | 1.390 (2) | C21—H21B | 0.9201 |
C12—H12 | 0.9414 | C21—H21C | 0.9739 |
C13—C14 | 1.386 (2) | N3—C4 | 1.366 (2) |
C13—H13 | 0.9168 | C4—C5 | 1.354 (2) |
C14—C15 | 1.376 (2) | C4—N4 | 1.428 (2) |
C14—N14 | 1.473 (2) | N4—O41 | 1.2301 (19) |
N14—O141 | 1.2274 (19) | N4—O42 | 1.2436 (19) |
N14—O142 | 1.2339 (19) | C5—H5 | 0.9323 |
C15—C16 | 1.387 (2) | ||
C5—N1—C2 | 107.85 (15) | C15—C16—H16 | 121.6 |
C5—N1—C11 | 125.42 (15) | C11—C16—H16 | 119.3 |
C2—N1—C11 | 126.72 (15) | N3—C2—N1 | 110.74 (15) |
C12—C11—C16 | 121.75 (16) | N3—C2—C21 | 125.22 (16) |
C12—C11—N1 | 119.16 (15) | N1—C2—C21 | 124.02 (16) |
C16—C11—N1 | 119.08 (15) | C2—C21—H21A | 111.8 |
C11—C12—C13 | 119.20 (17) | C2—C21—H21B | 107.1 |
C11—C12—H12 | 120.7 | H21A—C21—H21B | 109.3 |
C13—C12—H12 | 120.1 | C2—C21—H21C | 111.3 |
C14—C13—C12 | 118.21 (16) | H21A—C21—H21C | 108.6 |
C14—C13—H13 | 122.8 | H21B—C21—H21C | 108.7 |
C12—C13—H13 | 119.0 | C2—N3—C4 | 104.37 (15) |
C15—C14—C13 | 123.28 (16) | C5—C4—N3 | 113.01 (16) |
C15—C14—N14 | 118.37 (16) | C5—C4—N4 | 125.75 (16) |
C13—C14—N14 | 118.28 (16) | N3—C4—N4 | 121.24 (15) |
O141—N14—O142 | 123.47 (16) | O41—N4—O42 | 123.86 (16) |
O141—N14—C14 | 118.14 (15) | O41—N4—C4 | 118.76 (15) |
O142—N14—C14 | 118.37 (16) | O42—N4—C4 | 117.38 (15) |
C14—C15—C16 | 118.56 (17) | C4—C5—N1 | 104.02 (15) |
C14—C15—H15 | 119.4 | C4—C5—H5 | 134.9 |
C16—C15—H15 | 122.0 | N1—C5—H5 | 120.8 |
C15—C16—C11 | 118.99 (16) | ||
C5—N1—C11—C12 | 122.19 (19) | N1—C11—C16—C15 | 178.68 (15) |
C2—N1—C11—C12 | −58.0 (2) | C5—N1—C2—N3 | −0.3 (2) |
C5—N1—C11—C16 | −57.6 (2) | C11—N1—C2—N3 | 179.90 (15) |
C2—N1—C11—C16 | 122.18 (19) | C5—N1—C2—C21 | −179.11 (16) |
C16—C11—C12—C13 | 0.8 (3) | C11—N1—C2—C21 | 1.0 (3) |
N1—C11—C12—C13 | −179.07 (15) | N1—C2—N3—C4 | −0.44 (19) |
C11—C12—C13—C14 | 0.4 (2) | C21—C2—N3—C4 | 178.40 (17) |
C12—C13—C14—C15 | −1.1 (3) | C2—N3—C4—C5 | 1.0 (2) |
C12—C13—C14—N14 | 175.83 (15) | C2—N3—C4—N4 | −178.39 (15) |
C15—C14—N14—O141 | −8.9 (2) | C5—C4—N4—O41 | −172.79 (17) |
C13—C14—N14—O141 | 173.95 (15) | N3—C4—N4—O41 | 6.5 (2) |
C15—C14—N14—O142 | 169.37 (15) | C5—C4—N4—O42 | 7.3 (3) |
C13—C14—N14—O142 | −7.8 (2) | N3—C4—N4—O42 | −173.35 (15) |
C13—C14—C15—C16 | 0.8 (3) | N3—C4—C5—N1 | −1.2 (2) |
N14—C14—C15—C16 | −176.21 (15) | N4—C4—C5—N1 | 178.22 (15) |
C14—C15—C16—C11 | 0.4 (2) | C2—N1—C5—C4 | 0.84 (18) |
C12—C11—C16—C15 | −1.1 (3) | C11—N1—C5—C4 | −179.31 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12···N3i | 0.94 | 2.40 | 3.338 (2) | 177 |
C15—H15···O42ii | 0.91 | 2.55 | 3.333 (2) | 145 |
C21—H21A···O141iii | 0.97 | 2.52 | 3.429 (2) | 156 |
C5—H5···O141iv | 0.93 | 2.46 | 3.258 (2) | 143 |
Symmetry codes: (i) x−1/2, y, −z+3/2; (ii) −x+2, −y, −z+1; (iii) x+1/2, −y+1/2, −z+1; (iv) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H8N4O4 |
Mr | 248.20 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 100 |
a, b, c (Å) | 8.1416 (9), 12.7121 (10), 20.7789 (13) |
V (Å3) | 2150.6 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.4 × 0.15 × 0.05 |
Data collection | |
Diffractometer | Kuma KM-4-CCD four-circle |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.918, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11596, 2092, 1442 |
Rint | 0.054 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.099, 1.01 |
No. of reflections | 2092 |
No. of parameters | 163 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.24 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2007), CrysAlis RED (Oxford Diffraction, 2007), CrysAlis RED, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), Stereochemical Workstation Operation Manual (Siemens, 1989), SHELXL97.
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12···N3i | 0.94 | 2.40 | 3.338 (2) | 177.3 |
C15—H15···O42ii | 0.91 | 2.55 | 3.333 (2) | 144.5 |
C21—H21A···O141iii | 0.97 | 2.52 | 3.429 (2) | 156.3 |
C5—H5···O141iv | 0.93 | 2.46 | 3.258 (2) | 143.2 |
Symmetry codes: (i) x−1/2, y, −z+3/2; (ii) −x+2, −y, −z+1; (iii) x+1/2, −y+1/2, −z+1; (iv) −x+1, −y, −z+1. |

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Simple 4-nitroimidzoles are convenient compounds for studying weak interactions in molecular crystals. The molecules are relatively simple, with few degrees of conformational freedom, and the appropriate choice of substituents can highlight certain kind of interaction. Here, in 1-(4-nitrophenyl)-2-methyl-4-nitroimidazole the available specific interactions range from π-π interactions, through weak hydrogen bonds to nitro-nitro interactions. It turned out that the crystal packing is determined by relatively short and directional C—H···N and C—H···O hydrogen bonds. The first level of organization is the centrosymmetric C—H···O bonded dimer. These dimers are connected by C—H···N hydrogen bonds along [001] direction producing the tapes which are connected into two-dimensional network in the bc plane. The plane of imidazole ring makes the angle of 57.89° with the benzene ring.