Buy article online - an online subscription or single-article purchase is required to access this article.
Molecules of 2-iodo-5-nitroaniline (I) are linked by N—H
O hydrogen bonds into centrosymmetric dimers and by asymmetric three-centre iodo
nitro interactions into chains, so forming chains of fused centrosymmetric rings: these chains are linked by aromatic π
π stacking interactions to form a three-dimensional structure. In the isomeric 4-iodo-2-nitroaniline (II), each of the two independent molecules forms hydrogen-bonded chains that are linked by two-centre iodo
nitro interactions into sheets of two types, each containing only a single type of molecule: π
π stacking interactions are absent. In 2,4-diiodo-3-nitroaniline (III), where the nitro group is almost orthogonal to the aryl ring, a combination of N—H
O hydrogen bonds and two distinct two-centre iodo
nitro interactions links the molecules into a three-dimensional framework that is reinforced by aromatic π
π stacking interactions. Bond lengths and conformations are discussed and comparisons are drawn with related compounds.
Supporting information
CCDC references: 193585; 193586; 193587
Structure description
top
In full text version
Data collection: SMART (Bruker, 1997) for (I); Kappa-CCD server software (Nonius, 1997) for (II), (III). Cell refinement: SMART (Bruker, 1997) for (I); DENZO-SMN (Otwinowski & Minor, 1997) for (II), (III). Data reduction: SHELXTL (Bruker, 1997) for (I); DENZO-SMN (Otwinowski & Minor, 1997) for (II), (III). For all compounds, program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2002); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997) and PRPKAPPA (Ferguson, 1999).
(I) 2-Iodo-5-nitro-aniline
top
Crystal data top
C6H5IN2O2 | Z = 2 |
Mr = 264.02 | F(000) = 248 |
Triclinic, P1 | Dx = 2.326 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.4236 (15) Å | Cell parameters from 1674 reflections |
b = 7.4979 (18) Å | θ = 2.6–28.4° |
c = 8.293 (2) Å | µ = 4.20 mm−1 |
α = 71.422 (4)° | T = 120 K |
β = 85.285 (4)° | Plate, orange |
γ = 86.125 (4)° | 0.24 × 0.12 × 0.04 mm |
V = 376.98 (16) Å3 | |
Data collection top
Kappa-CCD diffractometer | 1674 independent reflections |
Radiation source: fine-focus sealed X-ray tube | 1620 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
φ scans, and ω scans with κ offsets | θmax = 28.4°, θmin = 2.6° |
Absorption correction: multi-scan SADABS (Bruker, 1997) | h = −8→7 |
Tmin = 0.434, Tmax = 0.850 | k = −10→9 |
2274 measured reflections | l = −10→10 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0823P)2 + 0.6322P] where P = (Fo2 + 2Fc2)/3 |
1674 reflections | (Δ/σ)max = 0.001 |
100 parameters | Δρmax = 1.29 e Å−3 |
0 restraints | Δρmin = −1.86 e Å−3 |
Crystal data top
C6H5IN2O2 | γ = 86.125 (4)° |
Mr = 264.02 | V = 376.98 (16) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.4236 (15) Å | Mo Kα radiation |
b = 7.4979 (18) Å | µ = 4.20 mm−1 |
c = 8.293 (2) Å | T = 120 K |
α = 71.422 (4)° | 0.24 × 0.12 × 0.04 mm |
β = 85.285 (4)° | |
Data collection top
Kappa-CCD diffractometer | 1674 independent reflections |
Absorption correction: multi-scan SADABS (Bruker, 1997) | 1620 reflections with I > 2σ(I) |
Tmin = 0.434, Tmax = 0.850 | Rint = 0.025 |
2274 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.07 | Δρmax = 1.29 e Å−3 |
1674 reflections | Δρmin = −1.86 e Å−3 |
100 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.4449 (7) | 0.3288 (6) | 0.3513 (6) | 0.0159 (8) | |
N1 | 0.3913 (6) | 0.4158 (6) | 0.1884 (5) | 0.0219 (8) | |
C2 | 0.6412 (7) | 0.2368 (6) | 0.3906 (6) | 0.0173 (8) | |
I2 | 0.85816 (4) | 0.22346 (3) | 0.19084 (3) | 0.01932 (15) | |
C3 | 0.6972 (7) | 0.1579 (6) | 0.5580 (6) | 0.0204 (9) | |
C4 | 0.5607 (7) | 0.1669 (6) | 0.6939 (6) | 0.0200 (8) | |
C5 | 0.3661 (7) | 0.2556 (6) | 0.6540 (6) | 0.0176 (8) | |
N5 | 0.2134 (7) | 0.2636 (5) | 0.7936 (5) | 0.0205 (8) | |
O51 | 0.0377 (6) | 0.3326 (6) | 0.7592 (5) | 0.0282 (8) | |
O52 | 0.2667 (6) | 0.1987 (6) | 0.9413 (4) | 0.0283 (8) | |
C6 | 0.3051 (7) | 0.3348 (6) | 0.4907 (6) | 0.0180 (8) | |
H1A | 0.4812 | 0.4160 | 0.1024 | 0.026* | |
H1B | 0.2668 | 0.4719 | 0.1692 | 0.026* | |
H3 | 0.8312 | 0.0968 | 0.5795 | 0.025* | |
H4 | 0.5982 | 0.1150 | 0.8086 | 0.024* | |
H6 | 0.1696 | 0.3934 | 0.4714 | 0.022* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.018 (2) | 0.0155 (19) | 0.0126 (19) | −0.0095 (15) | 0.0021 (16) | −0.0016 (15) |
N1 | 0.0179 (17) | 0.029 (2) | 0.0154 (17) | −0.0018 (15) | 0.0001 (14) | −0.0024 (15) |
C2 | 0.0178 (19) | 0.0142 (18) | 0.019 (2) | −0.0031 (15) | 0.0049 (16) | −0.0055 (15) |
I2 | 0.0192 (2) | 0.0186 (2) | 0.0180 (2) | −0.00292 (12) | 0.00588 (13) | −0.00399 (14) |
C3 | 0.019 (2) | 0.019 (2) | 0.021 (2) | −0.0011 (16) | 0.0005 (18) | −0.0029 (17) |
C4 | 0.023 (2) | 0.020 (2) | 0.015 (2) | −0.0029 (16) | −0.0009 (17) | −0.0016 (16) |
C5 | 0.022 (2) | 0.0138 (17) | 0.0153 (18) | −0.0068 (15) | 0.0061 (15) | −0.0029 (15) |
N5 | 0.029 (2) | 0.0177 (18) | 0.0151 (18) | −0.0066 (14) | 0.0046 (15) | −0.0052 (15) |
O51 | 0.0228 (17) | 0.035 (2) | 0.0239 (19) | 0.0037 (15) | 0.0051 (15) | −0.0083 (16) |
O52 | 0.036 (2) | 0.036 (2) | 0.0109 (16) | −0.0048 (16) | 0.0040 (14) | −0.0048 (14) |
C6 | 0.020 (2) | 0.0171 (19) | 0.016 (2) | −0.0039 (16) | 0.0027 (16) | −0.0040 (15) |
Geometric parameters (Å, º) top
C1—C2 | 1.406 (6) | N5—O51 | 1.226 (6) |
C2—C3 | 1.392 (6) | N5—O52 | 1.233 (5) |
C3—C4 | 1.387 (7) | C2—I2 | 2.099 (4) |
C4—C5 | 1.389 (6) | N1—H1A | 0.8800 |
C5—C6 | 1.372 (6) | N1—H1B | 0.8800 |
C6—C1 | 1.415 (6) | C3—H3 | 0.9500 |
C1—N1 | 1.361 (6) | C4—H4 | 0.9500 |
C5—N5 | 1.469 (6) | C6—H6 | 0.9500 |
| | | |
N1—C1—C2 | 122.8 (4) | C3—C4—C5 | 116.6 (4) |
N1—C1—C6 | 120.4 (4) | C3—C4—H4 | 121.7 |
C2—C1—C6 | 116.7 (4) | C5—C4—H4 | 121.7 |
C1—N1—H1A | 120.0 | C6—C5—C4 | 124.0 (4) |
C1—N1—H1B | 120.0 | C6—C5—N5 | 117.3 (4) |
H1A—N1—H1B | 120.0 | C4—C5—N5 | 118.7 (4) |
C3—C2—C1 | 121.9 (4) | O51—N5—O52 | 122.6 (5) |
C3—C2—I2 | 119.1 (3) | O51—N5—C5 | 118.9 (4) |
C1—C2—I2 | 119.0 (3) | O52—N5—C5 | 118.5 (4) |
C4—C3—C2 | 121.1 (4) | C5—C6—C1 | 119.7 (4) |
C4—C3—H3 | 119.5 | C5—C6—H6 | 120.1 |
C2—C3—H3 | 119.5 | C1—C6—H6 | 120.1 |
| | | |
C4—C5—N5—O51 | −176.1 (5) | C6—C5—N5—O51 | 3.0 (7) |
C4—C5—N5—O52 | 3.2 (7) | C6—C5—N5—O52 | −177.7 (4) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···I2 | 0.88 | 2.76 | 3.237 (4) | 115 |
N1—H1A···N1i | 0.88 | 2.44 | 3.212 (6) | 147 |
N1—H1B···O51ii | 0.88 | 2.51 | 3.311 (6) | 152 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x, −y+1, −z+1. |
(II) 4-Iodo-2-nitroaniline
top
Crystal data top
C6H5IN2O2 | F(000) = 1984 |
Mr = 264.02 | Dx = 2.325 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3426 reflections |
a = 26.5541 (9) Å | θ = 3.0–27.5° |
b = 7.0445 (2) Å | µ = 4.19 mm−1 |
c = 16.4416 (5) Å | T = 120 K |
β = 101.1548 (16)° | Plate, orange |
V = 3017.47 (16) Å3 | 0.25 × 0.20 × 0.05 mm |
Z = 16 | |
Data collection top
Kappa-CCD diffractometer | 3426 independent reflections |
Radiation source: fine-focus sealed X-ray tube | 2696 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.056 |
φ scans, and ω scans with κ offsets | θmax = 27.5°, θmin = 3.0° |
Absorption correction: multi-scan DENZO-SMN (Otwinowski & Minor, 1997) | h = −34→33 |
Tmin = 0.380, Tmax = 0.811 | k = −8→9 |
10470 measured reflections | l = −21→21 |
Refinement top
Refinement on F2 | Primary atom site location: Patterson |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.082 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0372P)2 + 3.2146P] where P = (Fo2 + 2Fc2)/3 |
3426 reflections | (Δ/σ)max = 0.001 |
193 parameters | Δρmax = 1.22 e Å−3 |
0 restraints | Δρmin = −1.55 e Å−3 |
Crystal data top
C6H5IN2O2 | V = 3017.47 (16) Å3 |
Mr = 264.02 | Z = 16 |
Monoclinic, C2/c | Mo Kα radiation |
a = 26.5541 (9) Å | µ = 4.19 mm−1 |
b = 7.0445 (2) Å | T = 120 K |
c = 16.4416 (5) Å | 0.25 × 0.20 × 0.05 mm |
β = 101.1548 (16)° | |
Data collection top
Kappa-CCD diffractometer | 3426 independent reflections |
Absorption correction: multi-scan DENZO-SMN (Otwinowski & Minor, 1997) | 2696 reflections with I > 2σ(I) |
Tmin = 0.380, Tmax = 0.811 | Rint = 0.056 |
10470 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.082 | H-atom parameters constrained |
S = 1.05 | Δρmax = 1.22 e Å−3 |
3426 reflections | Δρmin = −1.55 e Å−3 |
193 parameters | |
Special details top
Experimental. The program DENZO-SMN (Otwinowski & Minor, 1997) uses a scaling algorithm
[Fox, G·C. & Holmes, K·C. (1966). Acta Cryst. 20, 886–891] which
effectively corrects for absorption effects. High redundancy data were used in
the scaling program hence the 'multi-scan' code word was used. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N11 | 0.68796 (13) | 0.1809 (5) | −0.1364 (2) | 0.0198 (8) | |
C11 | 0.68831 (15) | 0.0538 (5) | −0.0754 (2) | 0.0119 (8) | |
C12 | 0.68395 (15) | −0.1455 (5) | −0.0880 (2) | 0.0124 (8) | |
N12 | 0.67958 (13) | −0.2279 (4) | −0.16873 (18) | 0.0153 (7) | |
O11 | 0.68253 (14) | −0.4017 (4) | −0.17493 (18) | 0.0258 (8) | |
O12 | 0.67287 (12) | −0.1245 (3) | −0.23131 (16) | 0.0188 (7) | |
C13 | 0.68352 (15) | −0.2708 (5) | −0.0221 (2) | 0.0120 (8) | |
C14 | 0.68856 (15) | −0.2026 (5) | 0.0571 (2) | 0.0133 (8) | |
I14 | 0.685502 (10) | −0.39196 (3) | 0.154272 (15) | 0.01541 (10) | |
C15 | 0.69470 (15) | −0.0077 (5) | 0.0717 (2) | 0.0130 (6) | |
C16 | 0.69464 (16) | 0.1149 (5) | 0.0072 (2) | 0.0134 (9) | |
N21 | 0.56163 (13) | 0.1718 (5) | 0.71651 (19) | 0.0189 (8) | |
C21 | 0.56160 (16) | 0.0452 (6) | 0.6553 (2) | 0.0137 (8) | |
C22 | 0.56084 (16) | −0.1527 (5) | 0.6649 (2) | 0.0130 (8) | |
N22 | 0.56014 (13) | −0.2378 (4) | 0.74340 (18) | 0.0158 (7) | |
O21 | 0.56090 (14) | −0.4123 (4) | 0.74901 (17) | 0.0278 (8) | |
O22 | 0.55858 (12) | −0.1370 (4) | 0.80485 (16) | 0.0191 (7) | |
C23 | 0.56147 (14) | −0.2773 (5) | 0.5981 (2) | 0.0125 (8) | |
C24 | 0.56281 (15) | −0.2051 (5) | 0.5220 (2) | 0.0120 (8) | |
I24 | 0.562716 (10) | −0.39239 (3) | 0.422623 (14) | 0.01538 (10) | |
C25 | 0.56393 (15) | −0.0091 (5) | 0.5095 (2) | 0.0130 (6) | |
C26 | 0.56319 (16) | 0.1112 (5) | 0.5744 (2) | 0.0134 (9) | |
H11A | 0.6917 | 0.3025 | −0.1245 | 0.024* | |
H11B | 0.6840 | 0.1426 | −0.1882 | 0.024* | |
H13 | 0.6797 | −0.4033 | −0.0323 | 0.014* | |
H15 | 0.6989 | 0.0398 | 0.1266 | 0.016* | |
H16 | 0.6990 | 0.2466 | 0.0188 | 0.016* | |
H21A | 0.5621 | 0.2942 | 0.7060 | 0.023* | |
H21B | 0.5611 | 0.1322 | 0.7671 | 0.023* | |
H23 | 0.5610 | −0.4108 | 0.6062 | 0.015* | |
H25 | 0.5652 | 0.0403 | 0.4562 | 0.016* | |
H26 | 0.5638 | 0.2442 | 0.5650 | 0.016* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N11 | 0.037 (2) | 0.0105 (16) | 0.0134 (17) | 0.0012 (15) | 0.0078 (16) | 0.0014 (14) |
C11 | 0.020 (2) | 0.0088 (18) | 0.0087 (18) | −0.0004 (16) | 0.0071 (16) | 0.0033 (15) |
C12 | 0.017 (2) | 0.014 (2) | 0.0070 (18) | 0.0009 (15) | 0.0042 (15) | −0.0018 (15) |
N12 | 0.023 (2) | 0.0151 (18) | 0.0080 (16) | −0.0010 (14) | 0.0039 (14) | 0.0004 (13) |
O11 | 0.054 (2) | 0.0094 (15) | 0.0140 (15) | −0.0014 (13) | 0.0078 (15) | −0.0025 (12) |
O12 | 0.0311 (18) | 0.0186 (15) | 0.0069 (13) | 0.0003 (12) | 0.0042 (12) | 0.0022 (11) |
C13 | 0.017 (2) | 0.0091 (18) | 0.0102 (18) | 0.0006 (15) | 0.0024 (15) | 0.0022 (15) |
C14 | 0.019 (2) | 0.014 (2) | 0.0074 (18) | −0.0022 (16) | 0.0036 (16) | 0.0034 (15) |
I14 | 0.02537 (19) | 0.01421 (16) | 0.00771 (15) | 0.00093 (10) | 0.00583 (12) | 0.00265 (9) |
C15 | 0.0202 (16) | 0.0138 (15) | 0.0062 (13) | 0.0003 (11) | 0.0056 (11) | 0.0003 (11) |
C16 | 0.018 (2) | 0.0072 (19) | 0.016 (2) | −0.0005 (15) | 0.0057 (17) | −0.0019 (16) |
N21 | 0.039 (2) | 0.0094 (15) | 0.0096 (16) | −0.0020 (16) | 0.0078 (15) | −0.0029 (14) |
C21 | 0.020 (2) | 0.0130 (18) | 0.0092 (19) | −0.0015 (17) | 0.0043 (16) | −0.0017 (16) |
C22 | 0.021 (2) | 0.0091 (17) | 0.0094 (18) | 0.0004 (16) | 0.0037 (16) | 0.0021 (15) |
N22 | 0.028 (2) | 0.0099 (16) | 0.0097 (16) | −0.0020 (14) | 0.0045 (14) | 0.0007 (13) |
O21 | 0.068 (3) | 0.0078 (14) | 0.0084 (14) | −0.0022 (14) | 0.0108 (15) | 0.0024 (11) |
O22 | 0.0351 (19) | 0.0162 (15) | 0.0070 (14) | 0.0010 (12) | 0.0068 (13) | −0.0043 (11) |
C23 | 0.017 (2) | 0.0100 (19) | 0.0108 (19) | 0.0022 (15) | 0.0028 (16) | 0.0002 (15) |
C24 | 0.018 (2) | 0.0103 (19) | 0.0081 (18) | 0.0004 (15) | 0.0034 (15) | −0.0031 (14) |
I24 | 0.02791 (19) | 0.01243 (16) | 0.00651 (15) | 0.00078 (10) | 0.00514 (12) | −0.00251 (9) |
C25 | 0.0202 (16) | 0.0138 (15) | 0.0062 (13) | 0.0003 (11) | 0.0056 (11) | 0.0003 (11) |
C26 | 0.021 (2) | 0.0096 (19) | 0.010 (2) | −0.0011 (16) | 0.0046 (17) | 0.0012 (15) |
Geometric parameters (Å, º) top
C11—C12 | 1.421 (5) | C21—C22 | 1.404 (5) |
C12—C13 | 1.399 (5) | C22—C23 | 1.409 (5) |
C13—C14 | 1.370 (5) | C23—C24 | 1.357 (5) |
C14—C15 | 1.398 (5) | C24—C25 | 1.397 (5) |
C15—C16 | 1.366 (5) | C25—C26 | 1.366 (5) |
C16—C11 | 1.405 (5) | C26—C21 | 1.417 (6) |
C11—N11 | 1.343 (5) | C21—N21 | 1.344 (5) |
C12—N12 | 1.433 (5) | C22—N22 | 1.426 (5) |
N12—O11 | 1.232 (4) | N22—O21 | 1.233 (4) |
N12—O12 | 1.245 (4) | N22—O22 | 1.242 (4) |
C14—I14 | 2.095 (4) | C24—I24 | 2.099 (4) |
N11—H11A | 0.8800 | N21—H21A | 0.8800 |
N11—H11B | 0.8800 | N21—H21B | 0.8800 |
C13—H13 | 0.9500 | C23—H23 | 0.9500 |
C15—H15 | 0.9500 | C25—H25 | 0.9500 |
C16—H16 | 0.9500 | C26—H26 | 0.9500 |
| | | |
C11—N11—H11A | 120.0 | C21—N21—H21A | 120.0 |
C11—N11—H11B | 120.0 | C21—N21—H21B | 120.0 |
H11A—N11—H11B | 120.0 | H21A—N21—H21B | 120.0 |
N11—C11—C12 | 124.2 (4) | N21—C21—C22 | 124.9 (4) |
N11—C11—C16 | 120.0 (4) | N21—C21—C26 | 119.3 (4) |
C12—C11—C16 | 115.8 (3) | C22—C21—C26 | 115.8 (3) |
C13—C12—C11 | 121.6 (3) | C21—C22—C23 | 121.9 (3) |
C13—C12—N12 | 116.8 (3) | C21—C22—N22 | 121.5 (3) |
C11—C12—N12 | 121.6 (3) | C23—C22—N22 | 116.6 (3) |
O11—N12—O12 | 120.9 (3) | O21—N22—O22 | 120.8 (3) |
O11—N12—C12 | 118.9 (3) | O21—N22—C22 | 118.9 (3) |
O12—N12—C12 | 120.1 (3) | O22—N22—C22 | 120.2 (3) |
C14—C13—C12 | 120.0 (3) | C24—C23—C22 | 119.5 (3) |
C14—C13—H13 | 120.0 | C24—C23—H23 | 120.3 |
C12—C13—H13 | 120.0 | C22—C23—H23 | 120.3 |
C13—C14—C15 | 119.6 (3) | C23—C24—C25 | 120.7 (3) |
C13—C14—I14 | 119.4 (3) | C23—C24—I24 | 119.0 (3) |
C15—C14—I14 | 121.0 (2) | C25—C24—I24 | 120.3 (3) |
C16—C15—C14 | 120.3 (3) | C26—C25—C24 | 119.7 (3) |
C16—C15—H15 | 119.8 | C26—C25—H25 | 120.2 |
C14—C15—H15 | 119.8 | C24—C25—H25 | 120.2 |
C15—C16—C11 | 122.6 (3) | C25—C26—C21 | 122.5 (3) |
C15—C16—H16 | 118.7 | C25—C26—H26 | 118.8 |
C11—C16—H16 | 118.7 | C21—C26—H26 | 118.8 |
| | | |
C11—C12—N12—O11 | 170.8 (4) | C21—C22—N22—O21 | −178.0 (4) |
C11—C12—N12—O12 | −9.3 (6) | C21—C22—N22—O22 | 2.2 (6) |
C13—C12—N12—O11 | −9.5 (6) | C23—C22—N22—O21 | 1.1 (6) |
C13—C12—N12—O12 | 170.5 (4) | C23—C22—N22—O22 | −178.6 (4) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N11—H11A···O11i | 0.88 | 2.24 | 3.005 (5) | 146 |
N11—H11B···O12 | 0.88 | 2.01 | 2.642 (4) | 128 |
N21—H21A···O21i | 0.88 | 2.19 | 2.979 (5) | 149 |
N21—H21B···O22 | 0.88 | 2.00 | 2.626 (4) | 127 |
C25—H25···O22ii | 0.95 | 2.55 | 3.495 (4) | 172 |
Symmetry codes: (i) x, y+1, z; (ii) x, −y, z−1/2. |
(III) 2,4-Diiodo-3-nitroaniline
top
Crystal data top
C6H4I2N2O2 | F(000) = 704 |
Mr = 389.91 | Dx = 2.752 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2144 reflections |
a = 7.6069 (3) Å | θ = 3.2–27.5° |
b = 12.5917 (4) Å | µ = 6.65 mm−1 |
c = 10.2546 (3) Å | T = 120 K |
β = 106.6693 (16)° | Plate, colourless |
V = 940.95 (6) Å3 | 0.28 × 0.24 × 0.08 mm |
Z = 4 | |
Data collection top
Kappa-CCD diffractometer | 2144 independent reflections |
Radiation source: fine-focus sealed X-ray tube | 1950 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.104 |
φ scans, and ω scans with κ offsets | θmax = 27.5°, θmin = 3.2° |
Absorption correction: multi-scan DENZO-SMN (Otwinowski & Minor, 1997) | h = −9→8 |
Tmin = 0.180, Tmax = 0.618 | k = −14→16 |
8456 measured reflections | l = −13→13 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H-atom parameters constrained |
wR(F2) = 0.122 | w = 1/[σ2(Fo2) + (0.0534P)2 + 3.8878P] where P = (Fo2 + 2Fc2)/3 |
S = 1.13 | (Δ/σ)max = 0.001 |
2144 reflections | Δρmax = 2.36 e Å−3 |
110 parameters | Δρmin = −2.26 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0044 (5) |
Crystal data top
C6H4I2N2O2 | V = 940.95 (6) Å3 |
Mr = 389.91 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.6069 (3) Å | µ = 6.65 mm−1 |
b = 12.5917 (4) Å | T = 120 K |
c = 10.2546 (3) Å | 0.28 × 0.24 × 0.08 mm |
β = 106.6693 (16)° | |
Data collection top
Kappa-CCD diffractometer | 2144 independent reflections |
Absorption correction: multi-scan DENZO-SMN (Otwinowski & Minor, 1997) | 1950 reflections with I > 2σ(I) |
Tmin = 0.180, Tmax = 0.618 | Rint = 0.104 |
8456 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.122 | H-atom parameters constrained |
S = 1.13 | Δρmax = 2.36 e Å−3 |
2144 reflections | Δρmin = −2.26 e Å−3 |
110 parameters | |
Special details top
Experimental. The program DENZO-SMN (Otwinowski & Minor, 1997) uses a scaling algorithm
[Fox, G·C. & Holmes, K·C. (1966). Acta Cryst. 20, 886–891] which
effectively corrects for absorption effects. High redundancy data were used in
the scaling program hence the 'multi-scan' code word was used. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 1.1845 (9) | 0.7118 (4) | 1.0887 (5) | 0.0243 (12) | |
C1 | 1.0924 (10) | 0.6510 (5) | 0.9783 (6) | 0.0196 (12) | |
C2 | 0.9004 (9) | 0.6434 (4) | 0.9321 (6) | 0.0181 (12) | |
I2 | 0.74257 (6) | 0.72632 (3) | 1.03612 (4) | 0.02391 (19) | |
C3 | 0.8187 (9) | 0.5795 (4) | 0.8200 (5) | 0.0140 (11) | |
N3 | 0.6156 (8) | 0.5717 (4) | 0.7755 (5) | 0.0193 (11) | |
O131 | 0.5473 (7) | 0.4924 (4) | 0.8106 (5) | 0.0272 (10) | |
O132 | 0.5278 (7) | 0.6435 (4) | 0.7058 (5) | 0.0256 (10) | |
C4 | 0.9182 (9) | 0.5253 (4) | 0.7479 (5) | 0.0174 (12) | |
I4 | 0.79798 (6) | 0.42775 (3) | 0.58144 (4) | 0.02460 (19) | |
C5 | 1.1090 (9) | 0.5363 (5) | 0.7901 (6) | 0.0198 (12) | |
C6 | 1.1913 (9) | 0.5982 (5) | 0.9006 (6) | 0.0198 (12) | |
H1A | 1.1226 | 0.7482 | 1.1341 | 0.029* | |
H1B | 1.3052 | 0.7141 | 1.1138 | 0.029* | |
H5 | 1.1817 | 0.5009 | 0.7421 | 0.024* | |
H6 | 1.3210 | 0.6059 | 0.9261 | 0.024* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.028 (3) | 0.023 (3) | 0.019 (2) | −0.004 (2) | 0.001 (2) | −0.001 (2) |
C1 | 0.030 (3) | 0.013 (2) | 0.015 (2) | −0.002 (2) | 0.006 (2) | 0.004 (2) |
C2 | 0.026 (3) | 0.010 (2) | 0.017 (3) | 0.001 (2) | 0.005 (2) | 0.000 (2) |
I2 | 0.0295 (3) | 0.0187 (3) | 0.0244 (3) | 0.00087 (15) | 0.0092 (2) | −0.00817 (15) |
C3 | 0.017 (3) | 0.010 (2) | 0.014 (2) | 0.0006 (19) | 0.003 (2) | 0.0049 (19) |
N3 | 0.026 (3) | 0.014 (2) | 0.018 (2) | −0.001 (2) | 0.006 (2) | −0.0029 (18) |
O131 | 0.025 (3) | 0.025 (2) | 0.034 (2) | −0.005 (2) | 0.011 (2) | 0.0041 (19) |
O132 | 0.023 (2) | 0.023 (2) | 0.027 (2) | 0.0044 (19) | 0.0006 (19) | 0.0063 (18) |
C4 | 0.027 (3) | 0.012 (3) | 0.013 (2) | 0.000 (2) | 0.007 (2) | 0.001 (2) |
I4 | 0.0378 (3) | 0.0208 (3) | 0.0164 (3) | −0.00668 (16) | 0.0098 (2) | −0.00600 (14) |
C5 | 0.023 (3) | 0.020 (3) | 0.017 (3) | 0.004 (2) | 0.008 (2) | 0.002 (2) |
C6 | 0.016 (3) | 0.024 (3) | 0.020 (3) | 0.003 (2) | 0.006 (2) | 0.003 (2) |
Geometric parameters (Å, º) top
N1—H1A | 0.8800 | C1—N1 | 1.380 (8) |
N1—H1B | 0.8800 | C2—I2 | 2.099 (6) |
C1—C2 | 1.404 (10) | C3—N3 | 1.484 (8) |
C2—C3 | 1.394 (8) | N3—O131 | 1.225 (7) |
C3—C4 | 1.380 (8) | N3—O132 | 1.225 (7) |
C4—C5 | 1.398 (9) | C4—I4 | 2.089 (6) |
C5—C6 | 1.370 (9) | C5—H5 | 0.9500 |
C6—C1 | 1.409 (9) | C6—H6 | 0.9500 |
| | | |
C1—N1—H1A | 120.0 | O132—N3—O131 | 124.5 (6) |
C1—N1—H1B | 120.0 | O132—N3—C3 | 118.4 (5) |
H1A—N1—H1B | 120.0 | O131—N3—C3 | 117.1 (5) |
N1—C1—C2 | 123.4 (6) | C3—C4—C5 | 117.7 (5) |
N1—C1—C6 | 119.8 (6) | C3—C4—I4 | 123.4 (5) |
C2—C1—C6 | 116.7 (6) | C5—C4—I4 | 118.9 (4) |
C3—C2—C1 | 119.5 (6) | C6—C5—C4 | 120.0 (6) |
C3—C2—I2 | 121.4 (5) | C6—C5—H5 | 120.0 |
C1—C2—I2 | 119.1 (4) | C4—C5—H5 | 120.0 |
C4—C3—C2 | 122.9 (6) | C5—C6—C1 | 123.0 (6) |
C4—C3—N3 | 119.0 (5) | C5—C6—H6 | 118.5 |
C2—C3—N3 | 118.0 (5) | C1—C6—H6 | 118.5 |
| | | |
N1—C1—C2—C3 | −179.6 (5) | C2—C3—N3—O131 | −100.3 (6) |
C6—C1—C2—C3 | 4.4 (8) | C2—C3—C4—C5 | −0.3 (8) |
N1—C1—C2—I2 | −0.8 (8) | N3—C3—C4—C5 | 178.4 (5) |
C6—C1—C2—I2 | −176.8 (4) | C2—C3—C4—I4 | 179.2 (4) |
C1—C2—C3—C4 | −2.4 (8) | N3—C3—C4—I4 | −2.1 (7) |
I2—C2—C3—C4 | 178.9 (4) | C3—C4—C5—C6 | 0.8 (9) |
C1—C2—C3—N3 | 178.9 (5) | I4—C4—C5—C6 | −178.7 (4) |
I2—C2—C3—N3 | 0.1 (7) | C4—C5—C6—C1 | 1.5 (9) |
C4—C3—N3—O132 | −98.4 (6) | N1—C1—C6—C5 | 179.8 (6) |
C2—C3—N3—O132 | 80.4 (7) | C2—C1—C6—C5 | −4.1 (9) |
C4—C3—N3—O131 | 81.0 (7) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O132i | 0.88 | 2.46 | 3.128 (8) | 133 |
Symmetry code: (i) x+1, −y+3/2, z+1/2. |
Experimental details
| (I) | (II) | (III) |
Crystal data |
Chemical formula | C6H5IN2O2 | C6H5IN2O2 | C6H4I2N2O2 |
Mr | 264.02 | 264.02 | 389.91 |
Crystal system, space group | Triclinic, P1 | Monoclinic, C2/c | Monoclinic, P21/c |
Temperature (K) | 120 | 120 | 120 |
a, b, c (Å) | 6.4236 (15), 7.4979 (18), 8.293 (2) | 26.5541 (9), 7.0445 (2), 16.4416 (5) | 7.6069 (3), 12.5917 (4), 10.2546 (3) |
α, β, γ (°) | 71.422 (4), 85.285 (4), 86.125 (4) | 90, 101.1548 (16), 90 | 90, 106.6693 (16), 90 |
V (Å3) | 376.98 (16) | 3017.47 (16) | 940.95 (6) |
Z | 2 | 16 | 4 |
Radiation type | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 4.20 | 4.19 | 6.65 |
Crystal size (mm) | 0.24 × 0.12 × 0.04 | 0.25 × 0.20 × 0.05 | 0.28 × 0.24 × 0.08 |
|
Data collection |
Diffractometer | Kappa-CCD | Kappa-CCD | Kappa-CCD |
Absorption correction | Multi-scan SADABS (Bruker, 1997) | Multi-scan DENZO-SMN (Otwinowski & Minor, 1997) | Multi-scan DENZO-SMN (Otwinowski & Minor, 1997) |
Tmin, Tmax | 0.434, 0.850 | 0.380, 0.811 | 0.180, 0.618 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2274, 1674, 1620 | 10470, 3426, 2696 | 8456, 2144, 1950 |
Rint | 0.025 | 0.056 | 0.104 |
(sin θ/λ)max (Å−1) | 0.670 | 0.649 | 0.649 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.102, 1.07 | 0.032, 0.082, 1.05 | 0.045, 0.122, 1.13 |
No. of reflections | 1674 | 3426 | 2144 |
No. of parameters | 100 | 193 | 110 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.29, −1.86 | 1.22, −1.55 | 2.36, −2.26 |
Selected geometric parameters (Å, º) for (I) topC1—C2 | 1.406 (6) | C1—N1 | 1.361 (6) |
C2—C3 | 1.392 (6) | C5—N5 | 1.469 (6) |
C3—C4 | 1.387 (7) | N5—O51 | 1.226 (6) |
C4—C5 | 1.389 (6) | N5—O52 | 1.233 (5) |
C5—C6 | 1.372 (6) | C2—I2 | 2.099 (4) |
C6—C1 | 1.415 (6) | | |
| | | |
C4—C5—N5—O52 | 3.2 (7) | C6—C5—N5—O51 | 3.0 (7) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···I2 | 0.88 | 2.76 | 3.237 (4) | 115 |
N1—H1A···N1i | 0.88 | 2.44 | 3.212 (6) | 147 |
N1—H1B···O51ii | 0.88 | 2.51 | 3.311 (6) | 152 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x, −y+1, −z+1. |
Selected geometric parameters (Å, º) for (II) topC11—C12 | 1.421 (5) | C21—C22 | 1.404 (5) |
C12—C13 | 1.399 (5) | C22—C23 | 1.409 (5) |
C13—C14 | 1.370 (5) | C23—C24 | 1.357 (5) |
C14—C15 | 1.398 (5) | C24—C25 | 1.397 (5) |
C15—C16 | 1.366 (5) | C25—C26 | 1.366 (5) |
C16—C11 | 1.405 (5) | C26—C21 | 1.417 (6) |
C11—N11 | 1.343 (5) | C21—N21 | 1.344 (5) |
C12—N12 | 1.433 (5) | C22—N22 | 1.426 (5) |
N12—O11 | 1.232 (4) | N22—O21 | 1.233 (4) |
N12—O12 | 1.245 (4) | N22—O22 | 1.242 (4) |
C14—I14 | 2.095 (4) | C24—I24 | 2.099 (4) |
| | | |
N11—C11—C12 | 124.2 (4) | N21—C21—C22 | 124.9 (4) |
N11—C11—C16 | 120.0 (4) | N21—C21—C26 | 119.3 (4) |
C12—C11—C16 | 115.8 (3) | C22—C21—C26 | 115.8 (3) |
| | | |
C11—C12—N12—O12 | −9.3 (6) | C21—C22—N22—O22 | 2.2 (6) |
C13—C12—N12—O11 | −9.5 (6) | C23—C22—N22—O21 | 1.1 (6) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N11—H11A···O11i | 0.88 | 2.24 | 3.005 (5) | 146 |
N11—H11B···O12 | 0.88 | 2.01 | 2.642 (4) | 128 |
N21—H21A···O21i | 0.88 | 2.19 | 2.979 (5) | 149 |
N21—H21B···O22 | 0.88 | 2.00 | 2.626 (4) | 127 |
C25—H25···O22ii | 0.95 | 2.55 | 3.495 (4) | 172 |
Symmetry codes: (i) x, y+1, z; (ii) x, −y, z−1/2. |
Selected geometric parameters (Å, º) for (III) topC1—C2 | 1.404 (10) | C1—N1 | 1.380 (8) |
C2—C3 | 1.394 (8) | C2—I2 | 2.099 (6) |
C3—C4 | 1.380 (8) | C3—N3 | 1.484 (8) |
C4—C5 | 1.398 (9) | N3—O131 | 1.225 (7) |
C5—C6 | 1.370 (9) | N3—O132 | 1.225 (7) |
C6—C1 | 1.409 (9) | C4—I4 | 2.089 (6) |
| | | |
N1—C1—C2 | 123.4 (6) | C4—C3—C2 | 122.9 (6) |
N1—C1—C6 | 119.8 (6) | C4—C3—N3 | 119.0 (5) |
C2—C1—C6 | 116.7 (6) | C2—C3—N3 | 118.0 (5) |
C3—C2—C1 | 119.5 (6) | C3—C4—C5 | 117.7 (5) |
C3—C2—I2 | 121.4 (5) | C3—C4—I4 | 123.4 (5) |
C1—C2—I2 | 119.1 (4) | C5—C4—I4 | 118.9 (4) |
| | | |
C2—C3—N3—O132 | 80.4 (7) | C2—C3—N3—O131 | −100.3 (6) |
Hydrogen-bond geometry (Å, º) for (III) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1B···O132i | 0.88 | 2.46 | 3.128 (8) | 133 |
Symmetry code: (i) x+1, −y+3/2, z+1/2. |
Subscribe to Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials
The full text of this article is available to subscribers to the journal.
If you have already registered and are using a computer listed in your registration details, please email
support@iucr.org for assistance.
In full text version