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In the title compound, C
4H
6N
2O
2S.·3H
2O, the 2-amino-2-thiazoline-4-carboxylic acid molecule is in a zwitterionic form and shows amino–imino tautomerism. There are intermolecular O—H
O, O—H
N, N—H
O and C—H
O interactions, forming a three-dimensional network.
Supporting information
CCDC reference: 226976
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.004 Å
- R factor = 0.023
- wR factor = 0.082
- Data-to-parameter ratio = 13.5
checkCIF/PLATON results
No syntax errors found
Alert level C
STRVA01_ALERT_4_C Flack test results are ambiguous.
From the CIF: _refine_ls_abs_structure_Flack 0.490
From the CIF: _refine_ls_abs_structure_Flack_su 0.090
PLAT033_ALERT_2_C Flack Parameter Value Deviates from Zero ....... 0.49
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT128_ALERT_4_C Non-standard setting of Space group Pca21 .... P21ab
PLAT250_ALERT_2_C Large U3/U1 ratio for average U(i,j) tensor .... 2.10
PLAT731_ALERT_1_C Bond Calc 0.83(4), Rep 0.825(19) ...... 2.11 su-Rat
O5 -H5A 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.86(4), Rep 0.854(19) ...... 2.11 su-Rat
O5 -H5B 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.83(4), Rep 0.825(19) ...... 2.11 su-Rat
O5 -H5A 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.86(4), Rep 0.854(19) ...... 2.11 su-Rat
O5 -H5B 1.555 1.555
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2
H2 O
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3
H2 O
Alert level G
REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is
correct. If it is not, please give the correct count in the
_publ_section_exptl_refinement section of the submitted CIF.
From the CIF: _diffrn_reflns_theta_max 27.42
From the CIF: _reflns_number_total 1968
Count of symmetry unique reflns 1116
Completeness (_total/calc) 176.34%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 852
Fraction of Friedel pairs measured 0.763
Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
11 ALERT level C = Check and explain
1 ALERT level G = General alerts; check
5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
5 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC & Rigaku, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Crystal data top
C4H6N2O2S·3H2O | F(000) = 424 |
Mr = 200.22 | Dx = 1.466 Mg m−3 |
Orthorhombic, P21ab | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P -2b 2a | Cell parameters from 11305 reflections |
a = 8.0835 (4) Å | θ = 2.5–27.4° |
b = 8.1546 (3) Å | µ = 0.35 mm−1 |
c = 13.7591 (7) Å | T = 293 K |
V = 906.97 (7) Å3 | Prism, colorless |
Z = 4 | 0.3 × 0.29 × 0.25 mm |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 1620 reflections with I > 2σ(I) |
Detector resolution: 10.00 pixels mm-1 | Rint = 0.019 |
ω scans | θmax = 27.4°, θmin = 1.5° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −10→10 |
Tmin = 0.849, Tmax = 0.917 | k = −10→10 |
8161 measured reflections | l = −17→17 |
1968 independent reflections | |
Refinement top
Refinement on F2 | w = 1/[σ2(Fo2) + (0.0444P)2] where P = (Fo2 + 2Fc2)/3 |
Least-squares matrix: full | (Δ/σ)max = 0.004 |
R[F2 > 2σ(F2)] = 0.023 | Δρmax = 0.23 e Å−3 |
wR(F2) = 0.082 | Δρmin = −0.15 e Å−3 |
S = 1.07 | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1968 reflections | Extinction coefficient: 0.010 (2) |
146 parameters | Absolute structure: Flack (1983), 852 Friedel pairs |
10 restraints | Absolute structure parameter: 0.49 (9) |
H atoms treated by a mixture of independent and constrained refinement | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S | 0.34336 (8) | 0.21566 (6) | 0.19887 (4) | 0.03618 (16) | |
O1 | 0.3635 (3) | −0.21679 (19) | 0.40829 (12) | 0.0473 (5) | |
O2 | 0.4055 (2) | −0.3504 (2) | 0.27003 (13) | 0.0470 (5) | |
O3 | 0.1931 (2) | −0.4669 (2) | 0.49423 (13) | 0.0380 (4) | |
O4 | 0.4469 (3) | −0.3793 (3) | 0.07247 (15) | 0.0505 (5) | |
O5 | 0.1440 (3) | 0.1299 (3) | 0.0036 (2) | 0.0716 (7) | |
N1 | 0.4909 (3) | 0.0671 (2) | 0.33846 (14) | 0.0306 (4) | |
N2 | 0.4767 (3) | 0.3507 (2) | 0.35625 (15) | 0.0389 (5) | |
C1 | 0.3293 (4) | −0.0063 (2) | 0.20038 (17) | 0.0392 (6) | |
C2 | 0.4635 (3) | −0.0667 (2) | 0.27056 (15) | 0.0296 (4) | |
C3 | 0.4474 (3) | 0.2142 (3) | 0.30938 (15) | 0.0289 (4) | |
C4 | 0.4062 (3) | −0.2241 (3) | 0.32158 (17) | 0.0315 (5) | |
H1 | 0.558 (3) | 0.042 (4) | 0.3836 (17) | 0.043 (8)* | |
H1A | 0.2208 | −0.0408 | 0.2225 | 0.047* | |
H1B | 0.3478 | −0.0503 | 0.1358 | 0.047* | |
H2 | 0.5656 | −0.0886 | 0.2344 | 0.036* | |
H2A | 0.443 (4) | 0.439 (3) | 0.327 (2) | 0.055 (9)* | |
H2B | 0.540 (3) | 0.350 (4) | 0.4061 (16) | 0.044 (8)* | |
H3A | 0.259 (4) | −0.532 (4) | 0.522 (2) | 0.064 (10)* | |
H3B | 0.255 (4) | −0.400 (3) | 0.468 (2) | 0.055 (10)* | |
H4A | 0.348 (3) | −0.388 (4) | 0.051 (2) | 0.067 (10)* | |
H4B | 0.430 (5) | −0.378 (4) | 0.1326 (14) | 0.073 (12)* | |
H5A | 0.082 (5) | 0.055 (4) | 0.021 (3) | 0.087 (15)* | |
H5B | 0.077 (5) | 0.202 (4) | −0.019 (3) | 0.090 (15)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S | 0.0455 (3) | 0.0275 (2) | 0.0356 (3) | 0.0026 (3) | −0.0055 (3) | 0.0069 (2) |
O1 | 0.0738 (14) | 0.0288 (7) | 0.0391 (8) | −0.0096 (10) | 0.0119 (10) | 0.0007 (7) |
O2 | 0.0803 (15) | 0.0219 (7) | 0.0387 (9) | −0.0001 (8) | −0.0030 (9) | −0.0025 (7) |
O3 | 0.0413 (10) | 0.0346 (9) | 0.0380 (9) | −0.0022 (8) | −0.0034 (8) | 0.0038 (8) |
O4 | 0.0499 (13) | 0.0585 (12) | 0.0432 (11) | 0.0009 (11) | 0.0019 (10) | −0.0039 (9) |
O5 | 0.0502 (13) | 0.0704 (17) | 0.0941 (19) | 0.0039 (13) | 0.0108 (12) | 0.0261 (15) |
N1 | 0.0382 (11) | 0.0220 (8) | 0.0317 (9) | −0.0008 (9) | −0.0060 (9) | 0.0030 (7) |
N2 | 0.0545 (14) | 0.0239 (9) | 0.0383 (12) | 0.0005 (10) | −0.0063 (10) | 0.0022 (9) |
C1 | 0.0561 (16) | 0.0252 (9) | 0.0362 (11) | 0.0003 (14) | −0.0084 (13) | 0.0016 (9) |
C2 | 0.0364 (11) | 0.0217 (9) | 0.0307 (10) | 0.0009 (9) | 0.0025 (10) | −0.0010 (8) |
C3 | 0.0309 (11) | 0.0255 (10) | 0.0303 (11) | 0.0000 (9) | 0.0034 (9) | 0.0017 (9) |
C4 | 0.0379 (12) | 0.0225 (9) | 0.0341 (12) | 0.0012 (9) | −0.0026 (9) | 0.0024 (9) |
Geometric parameters (Å, º) top
S—C3 | 1.738 (2) | N1—H1 | 0.848 (17) |
S—C1 | 1.814 (2) | N2—H2A | 0.867 (18) |
O1—C4 | 1.243 (3) | N2—H2B | 0.856 (17) |
O3—H3A | 0.846 (18) | C1—C2 | 1.533 (4) |
O3—H3B | 0.821 (18) | C1—H1A | 0.97 |
O4—H4A | 0.855 (19) | C1—H1B | 0.97 |
O4—H4B | 0.839 (18) | C2—H2 | 0.98 |
O5—H5A | 0.825 (19) | C3—N2 | 1.308 (3) |
O5—H5B | 0.854 (19) | C4—O2 | 1.250 (3) |
N1—C3 | 1.313 (3) | C4—C2 | 1.534 (3) |
N1—C2 | 1.454 (3) | | |
| | | |
S—C1—H1A | 110.4 | C2—C1—S | 106.47 (17) |
S—C1—H1B | 110.4 | C2—C1—H1A | 110.4 |
O1—C4—O2 | 125.6 (2) | C2—C1—H1B | 110.4 |
O1—C4—C2 | 118.88 (19) | C3—S—C1 | 90.77 (11) |
O2—C4—C2 | 115.5 (2) | C3—N1—C2 | 116.70 (19) |
N1—C2—C1 | 105.76 (17) | C3—N1—H1 | 128 (2) |
N1—C2—C4 | 112.33 (18) | C3—N2—H2A | 115 (2) |
N1—C3—S | 113.74 (16) | C3—N2—H2B | 120 (2) |
N1—C2—H2 | 109.5 | C4—C2—H2 | 109.5 |
N2—C3—N1 | 125.4 (2) | H1A—C1—H1B | 108.6 |
N2—C3—S | 120.88 (17) | H2A—N2—H2B | 124 (3) |
C1—C2—C4 | 110.1 (2) | H3A—O3—H3B | 103 (3) |
C1—C2—H2 | 109.5 | H5A—O5—H5B | 103 (4) |
C2—N1—H1 | 113 (2) | H4A—O4—H4B | 101 (4) |
| | | |
S—C1—C2—N1 | 26.2 (2) | C1—S—C3—N1 | 8.9 (2) |
S—C1—C2—C4 | 147.72 (17) | C2—N1—C3—N2 | −173.2 (2) |
O1—C4—C2—N1 | 11.6 (3) | C2—N1—C3—S | 6.7 (3) |
O1—C4—C2—C1 | −106.0 (3) | C3—S—C1—C2 | −20.29 (19) |
O2—C4—C2—N1 | −169.1 (2) | C3—N1—C2—C1 | −22.0 (3) |
O2—C4—C2—C1 | 73.3 (3) | C3—N1—C2—C4 | −142.1 (2) |
C1—S—C3—N2 | −171.2 (2) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···O4i | 0.83 (2) | 1.94 (2) | 2.759 (3) | 175 (4) |
O5—H5B···O4ii | 0.85 (2) | 1.94 (2) | 2.787 (3) | 174 (4) |
O4—H4B···O2 | 0.84 (2) | 1.92 (2) | 2.749 (3) | 173 (4) |
O3—H3A···O1iii | 0.85 (2) | 1.97 (2) | 2.802 (3) | 166 (4) |
O3—H3B···O1 | 0.82 (2) | 1.92 (2) | 2.731 (3) | 169 (3) |
O3—H3A···N1iii | 0.85 (2) | 2.80 (3) | 3.343 (3) | 123 (3) |
N1—H1···O3iv | 0.85 (2) | 1.97 (2) | 2.816 (3) | 173 (3) |
N2—H2A···O2v | 0.87 (2) | 1.91 (2) | 2.772 (3) | 170 (3) |
N2—H2B···O1vi | 0.86 (2) | 2.98 (3) | 3.411 (3) | 114 (2) |
N2—H2B···O3vii | 0.86 (2) | 2.08 (2) | 2.862 (3) | 152 (3) |
C1—H1B···O5 | 0.97 | 2.86 | 3.288 (4) | 108 |
C1—H1B···O4 | 0.97 | 2.93 | 3.640 (3) | 131 |
C1—H1A···O2i | 0.97 | 2.78 | 3.744 (4) | 175 |
C2—H2···O2iv | 0.98 | 2.84 | 3.637 (3) | 140 |
Symmetry codes: (i) x−1/2, −y−1/2, z; (ii) x−1/2, −y, −z; (iii) x, y−1/2, −z+1; (iv) x+1/2, −y−1/2, z; (v) x, y+1, z; (vi) x, y+1/2, −z+1; (vii) x+1/2, −y, −z+1. |
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