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The crystal structure of 2,4,5-tri­chloro­iodo­benzene, C6H2Cl3I, a precursor of polychlorinated bi­phenyls (PCBs), is described. The mol­ecule is disordered in two distinct ways. Despite its lack of inversion point symmetry, it straddles an inversion centre in space group P21/n. An additional minor disorder component occurs as a result of a 180° rotation of some mol­ecules about [011].

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803013977/om6149sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536803013977/om6149Isup2.hkl
Contains datablock I

CCDC reference: 217614

Key indicators

  • Single-crystal X-ray study
  • T = 90 K
  • Mean [sigma](C-C) = 0.006 Å
  • R factor = 0.035
  • wR factor = 0.078
  • Data-to-parameter ratio = 16.7

checkCIF results

No syntax errors found

ADDSYM reports no extra symmetry








Comment top

PCBs are an important group of widespread environmental contaminants, known to cause a variety of toxic effects (Robertson & Hansen, 2001). During our attempts to synthesize pure PCB congeners, we obtained crystals of the title compound, (I), whose structure is reported herein.

2,4,5-trichloro-1-iodobenzene is one compound in a series of chlorinated derivatives of iodo- or bromobenzenes, which are `building blocks' to obtain polychlorinated biphenyls (PCBs). The 2,4,5-trichlorophenyl moiety is commonly found in PCB congeners in combination with a second phenyl moiety, and its three-dimensional structure is correlated with the toxicity of PCBs (Lehmler & Robertson, 2001). The availability of crystal structure data will therefore aid us in our understanding of toxicity of PCB congeners with a 2,4,5-substitution pattern.

Experimental top

The 2,4,5-trichloroiodobenzene crystals were obtained while attempting to synthesize 2,4,5-trichlorobiphenyl in the Suzuki reaction (Lehmler et al., 2001). Colorless needle-shaped crystals formed from solution in methanol.

Refinement top

The crystals are extensively disordered. The asymmetric unit contains nominally half a molecule, but it is disordered such that the Cl and I atoms are partially superimposed. Given the known chemical composition, a satisfactory model requires that the sum of the Cl atom occupancies should sum to 1.5 over the two halogen sites in the asymmetric unit, which was accomplished with the SUMP command in SHELXL97 (Sheldrick, 1997). This in turn allowed the I occupancy total over the two sites to be 0.5 while at the same time ensuring that the total occupancy of each site itself is unity. Bond distances for C—Cl and C—I are heavily correlated as a result of the disorder and it was not possible to independently refine both. The length of C—I bonds was optimized to be 1.15 times that of the corresponding C—Cl bonds. This treatment ensured that the C—Cl bonds were typical for this class of compound (e.g. Lehmler et al., 2001). The C—I bond length reported here should thus be regarded as a compromise to improve the least-squares fit and no particular claims are made for the accuracy of this C—I distance. The anisotropic displacement parameters (ADPs) of each individual pair of overlapping Cl/I were constrained to be equal while the ADPs between each pair were restrained to be similar.

Computing details top

Data collection: COLLECT (Nonius, 1998); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO-SMN (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP in Siemens SHELXTL (Sheldrick, 1994); software used to prepare material for publication: SHELX97-2 (Sheldrick, 1997) and local procedures.

Figures top
[Figure 1] Fig. 1. An ellipsoid plot of 2,4,5-trichloroiodobenzene with non-H atom displacement ellipsoids drawn at the 50% probability level.
[Figure 2] Fig. 2. The nature of disorder in 2,4,5-trichloroiodobenzene at 90 K.
(I) top
Crystal data top
C6H2Cl3IF(000) = 284
Mr = 307.33Dx = 2.471 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 3.9191 (8) ÅCell parameters from 993 reflections
b = 10.894 (2) Åθ = 1.0–27.5°
c = 9.852 (2) ŵ = 4.76 mm1
β = 100.87 (3)°T = 90 K
V = 413.07 (15) Å3Block, colourless
Z = 20.20 × 0.10 × 0.10 mm
Data collection top
Nonius KappaCCD
diffractometer
936 independent reflections
Radiation source: fine-focus sealed tube884 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.035
Detector resolution: 18 pixels mm-1θmax = 27.5°, θmin = 2.8°
ω scans at fixed χ = 55°h = 45
Absorption correction: multi-scan
(SADABS; Sheldrick, 1997)
k = 1314
Tmin = 0.570, Tmax = 0.621l = 1212
6306 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.078 w = 1/[σ2(Fo2))2 + 1.7326P]
where P = (Fo2 + 2Fc2)/3
S = 1.35(Δ/σ)max < 0.001
936 reflectionsΔρmax = 0.64 e Å3
56 parametersΔρmin = 0.72 e Å3
5 restraintsExtinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.011 (2)
Crystal data top
C6H2Cl3IV = 413.07 (15) Å3
Mr = 307.33Z = 2
Monoclinic, P21/nMo Kα radiation
a = 3.9191 (8) ŵ = 4.76 mm1
b = 10.894 (2) ÅT = 90 K
c = 9.852 (2) Å0.20 × 0.10 × 0.10 mm
β = 100.87 (3)°
Data collection top
Nonius KappaCCD
diffractometer
936 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 1997)
884 reflections with I > 2σ(I)
Tmin = 0.570, Tmax = 0.621Rint = 0.035
6306 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0355 restraints
wR(F2) = 0.078H-atom parameters constrained
S = 1.35Δρmax = 0.64 e Å3
936 reflectionsΔρmin = 0.72 e Å3
56 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
Cl10.151 (2)0.4432 (7)0.2017 (8)0.0208 (4)0.6201 (14)
I10.1386 (9)0.4246 (2)0.1821 (3)0.0208 (4)0.3799 (14)
Cl20.063 (3)0.2275 (4)0.4017 (10)0.0314 (7)0.8799 (14)
I20.060 (6)0.2056 (10)0.403 (2)0.0314 (7)0.1201 (14)
C10.0622 (11)0.4691 (4)0.3699 (4)0.0249 (9)
C20.0299 (11)0.3787 (4)0.4563 (5)0.0258 (9)
C30.0924 (11)0.4098 (4)0.5855 (5)0.0263 (9)
H30.15620.34800.64410.032*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cl10.0303 (4)0.0179 (10)0.0161 (9)0.0004 (6)0.0089 (6)0.0089 (5)
I10.0303 (4)0.0179 (10)0.0161 (9)0.0004 (6)0.0089 (6)0.0089 (5)
Cl20.0475 (6)0.0129 (19)0.0321 (6)0.0048 (19)0.0033 (4)0.0012 (17)
I20.0475 (6)0.0129 (19)0.0321 (6)0.0048 (19)0.0033 (4)0.0012 (17)
C10.0204 (19)0.031 (2)0.021 (2)0.0020 (17)0.0018 (15)0.0022 (17)
C20.022 (2)0.026 (2)0.026 (2)0.0012 (16)0.0048 (16)0.0023 (17)
C30.021 (2)0.030 (2)0.026 (2)0.0012 (17)0.0018 (16)0.0066 (17)
Geometric parameters (Å, º) top
Cl1—C11.778 (8)C1—C21.393 (6)
I1—C11.989 (5)C2—C31.383 (6)
Cl2—C21.729 (7)C3—C1i1.389 (6)
I2—C21.955 (12)C3—H30.9500
C1—C3i1.389 (6)
C3i—C1—C2119.7 (4)C1—C2—Cl2119.7 (5)
C3i—C1—Cl1115.2 (4)C3—C2—I2118.0 (7)
C2—C1—Cl1125.1 (4)C1—C2—I2121.9 (7)
C3i—C1—I1120.5 (3)C2—C3—C1i120.3 (4)
C2—C1—I1119.8 (3)C2—C3—H3119.8
C3—C2—C1120.0 (4)C1i—C3—H3119.8
C3—C2—Cl2120.3 (5)
C3i—C1—C2—C30.3 (7)C3i—C1—C2—I2177.7 (8)
Cl1—C1—C2—C3179.9 (5)Cl1—C1—C2—I22.0 (10)
I1—C1—C2—C3178.3 (3)I1—C1—C2—I23.8 (9)
C3i—C1—C2—Cl2179.3 (5)C1—C2—C3—C1i0.3 (7)
Cl1—C1—C2—Cl20.4 (7)Cl2—C2—C3—C1i179.3 (5)
I1—C1—C2—Cl22.2 (6)I2—C2—C3—C1i177.8 (8)
Symmetry code: (i) x, y+1, z+1.

Experimental details

Crystal data
Chemical formulaC6H2Cl3I
Mr307.33
Crystal system, space groupMonoclinic, P21/n
Temperature (K)90
a, b, c (Å)3.9191 (8), 10.894 (2), 9.852 (2)
β (°) 100.87 (3)
V3)413.07 (15)
Z2
Radiation typeMo Kα
µ (mm1)4.76
Crystal size (mm)0.20 × 0.10 × 0.10
Data collection
DiffractometerNonius KappaCCD
diffractometer
Absorption correctionMulti-scan
(SADABS; Sheldrick, 1997)
Tmin, Tmax0.570, 0.621
No. of measured, independent and
observed [I > 2σ(I)] reflections
6306, 936, 884
Rint0.035
(sin θ/λ)max1)0.650
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.035, 0.078, 1.35
No. of reflections936
No. of parameters56
No. of restraints5
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.64, 0.72

Computer programs: COLLECT (Nonius, 1998), SCALEPACK (Otwinowski & Minor, 1997), DENZO-SMN (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), XP in Siemens SHELXTL (Sheldrick, 1994), SHELX97-2 (Sheldrick, 1997) and local procedures.

 

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