Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803011607/tk6108sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536803011607/tk6108Isup2.hkl |
CCDC reference: 217434
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.003 Å
- R factor = 0.036
- wR factor = 0.096
- Data-to-parameter ratio = 16.5
checkCIF results
No syntax errors found ADDSYM reports no extra symmetry
Ethyl chloroformate was treated with potassium thiocyanate in ethyl acetate under the condition of solid-liquid phase transfer catalysis using 3% polyethylene glycol-400 as the catalyst to give the corresponding ethoxycarbonyl isothiocyanate, which was reacted with aniline to give the title compound. The solid was separated from the liquid phase by filtration, washed with ethyl acetate and then dried in air. The single crystals was obtained by the slow evaporation of its ethanol solution after two weeks.
Data collection: XSCANS (Siemens, 1994); cell refinement: XSCANS; data reduction: SHELXTL (Siemens, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Fig. 1. View of the hydrogen-bonded molecules showing the atomic labeling. Displacement ellipsoids are drawn at the 50% probability level. |
C10H12N2O2S | Z = 2 |
Mr = 224.28 | F(000) = 236 |
Triclinic, P1 | Dx = 1.305 Mg m−3 |
a = 5.787 (1) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.218 (2) Å | Cell parameters from 31 reflections |
c = 10.501 (2) Å | θ = 3.5–13.8° |
α = 109.39 (2)° | µ = 0.27 mm−1 |
β = 94.41 (2)° | T = 296 K |
γ = 100.04 (1)° | Block, colorless |
V = 570.6 (2) Å3 | 0.58 × 0.44 × 0.30 mm |
Siemens P4 diffractometer | 1823 reflections with I > 2σ(I) |
Radiation source: normal-focus sealed tube | Rint = 0.009 |
Graphite monochromator | θmax = 26.5°, θmin = 2.1° |
ω scans | h = 0→7 |
Absorption correction: empirical (using intensity measurements) (XSCANS; Siemens, 1994) | k = −11→11 |
Tmin = 0.858, Tmax = 0.923 | l = −13→13 |
2611 measured reflections | 3 standard reflections every 97 reflections |
2277 independent reflections | intensity decay: 2.4% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.036 | H-atom parameters constrained |
wR(F2) = 0.096 | w = 1/[σ2(Fo2) + (0.0408P)2 + 0.1635P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max < 0.001 |
2277 reflections | Δρmax = 0.19 e Å−3 |
138 parameters | Δρmin = −0.28 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.099 (7) |
C10H12N2O2S | γ = 100.04 (1)° |
Mr = 224.28 | V = 570.6 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.787 (1) Å | Mo Kα radiation |
b = 10.218 (2) Å | µ = 0.27 mm−1 |
c = 10.501 (2) Å | T = 296 K |
α = 109.39 (2)° | 0.58 × 0.44 × 0.30 mm |
β = 94.41 (2)° |
Siemens P4 diffractometer | 1823 reflections with I > 2σ(I) |
Absorption correction: empirical (using intensity measurements) (XSCANS; Siemens, 1994) | Rint = 0.009 |
Tmin = 0.858, Tmax = 0.923 | 3 standard reflections every 97 reflections |
2611 measured reflections | intensity decay: 2.4% |
2277 independent reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.19 e Å−3 |
2277 reflections | Δρmin = −0.28 e Å−3 |
138 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.40194 (10) | 0.18086 (5) | 0.64239 (5) | 0.0579 (2) | |
O1 | 1.0080 (2) | 0.33985 (12) | 0.43949 (13) | 0.0518 (3) | |
O2 | 0.9551 (2) | 0.10527 (12) | 0.32376 (13) | 0.0537 (4) | |
N1 | 0.7186 (3) | 0.39717 (14) | 0.63107 (15) | 0.0475 (4) | |
H1N | 0.8285 | 0.4293 | 0.5918 | 0.057* | |
N2 | 0.7293 (3) | 0.17541 (14) | 0.48088 (15) | 0.0489 (4) | |
H2N | 0.6721 | 0.0855 | 0.4531 | 0.059* | |
C1 | 0.7706 (4) | 0.53877 (19) | 0.87137 (19) | 0.0511 (5) | |
H1A | 0.9024 | 0.5016 | 0.8846 | 0.061* | |
C2 | 0.7032 (4) | 0.6370 (2) | 0.9801 (2) | 0.0608 (6) | |
H2A | 0.7892 | 0.6654 | 1.0668 | 0.073* | |
C3 | 0.5104 (4) | 0.6926 (2) | 0.9607 (2) | 0.0629 (6) | |
H3 | 0.4660 | 0.7594 | 1.0338 | 0.075* | |
C4 | 0.3834 (4) | 0.6496 (2) | 0.8332 (2) | 0.0636 (6) | |
H4 | 0.2520 | 0.6873 | 0.8203 | 0.076* | |
C5 | 0.4477 (3) | 0.5507 (2) | 0.7231 (2) | 0.0547 (5) | |
H5 | 0.3606 | 0.5216 | 0.6367 | 0.066* | |
C6 | 0.6423 (3) | 0.49612 (17) | 0.74365 (17) | 0.0414 (4) | |
C7 | 0.6282 (3) | 0.25850 (17) | 0.58446 (17) | 0.0432 (4) | |
C8 | 0.9098 (3) | 0.21843 (18) | 0.41685 (18) | 0.0430 (4) | |
C9 | 1.1520 (4) | 0.1313 (2) | 0.2521 (2) | 0.0586 (5) | |
H9A | 1.2942 | 0.1830 | 0.3166 | 0.070* | |
H9B | 1.1172 | 0.1874 | 0.1973 | 0.070* | |
C10 | 1.1873 (5) | −0.0080 (3) | 0.1639 (3) | 0.0867 (8) | |
H10A | 1.2217 | −0.0624 | 0.2192 | 0.104* | |
H10B | 1.3173 | 0.0058 | 0.1149 | 0.104* | |
H10C | 1.0457 | −0.0579 | 0.1003 | 0.104* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0716 (4) | 0.0352 (3) | 0.0637 (3) | 0.0025 (2) | 0.0349 (3) | 0.0120 (2) |
O1 | 0.0580 (8) | 0.0324 (7) | 0.0609 (8) | 0.0034 (6) | 0.0231 (6) | 0.0110 (6) |
O2 | 0.0634 (8) | 0.0340 (6) | 0.0587 (8) | 0.0060 (6) | 0.0289 (7) | 0.0075 (6) |
N1 | 0.0563 (9) | 0.0312 (7) | 0.0499 (8) | 0.0022 (6) | 0.0230 (7) | 0.0078 (6) |
N2 | 0.0609 (9) | 0.0280 (7) | 0.0520 (9) | 0.0022 (6) | 0.0238 (7) | 0.0068 (6) |
C1 | 0.0596 (12) | 0.0423 (10) | 0.0521 (11) | 0.0141 (9) | 0.0121 (9) | 0.0149 (8) |
C2 | 0.0825 (15) | 0.0494 (11) | 0.0444 (11) | 0.0105 (11) | 0.0119 (10) | 0.0097 (9) |
C3 | 0.0837 (16) | 0.0437 (11) | 0.0639 (13) | 0.0194 (10) | 0.0377 (12) | 0.0135 (9) |
C4 | 0.0573 (12) | 0.0577 (13) | 0.0830 (16) | 0.0232 (10) | 0.0295 (12) | 0.0242 (11) |
C5 | 0.0478 (11) | 0.0536 (11) | 0.0580 (12) | 0.0062 (9) | 0.0096 (9) | 0.0155 (9) |
C6 | 0.0451 (10) | 0.0296 (8) | 0.0453 (9) | 0.0014 (7) | 0.0156 (8) | 0.0091 (7) |
C7 | 0.0525 (10) | 0.0331 (9) | 0.0419 (9) | 0.0060 (7) | 0.0129 (8) | 0.0107 (7) |
C8 | 0.0487 (10) | 0.0340 (9) | 0.0437 (9) | 0.0067 (7) | 0.0120 (8) | 0.0102 (7) |
C9 | 0.0596 (12) | 0.0519 (11) | 0.0656 (13) | 0.0135 (9) | 0.0309 (10) | 0.0164 (9) |
C10 | 0.108 (2) | 0.0644 (15) | 0.1007 (19) | 0.0385 (14) | 0.0571 (17) | 0.0267 (13) |
S1—C7 | 1.6716 (18) | C2—H2A | 0.9300 |
O1—C8 | 1.207 (2) | C3—C4 | 1.368 (3) |
O2—C8 | 1.325 (2) | C3—H3 | 0.9300 |
O2—C9 | 1.447 (2) | C4—C5 | 1.385 (3) |
N1—C7 | 1.328 (2) | C4—H4 | 0.9300 |
N1—C6 | 1.434 (2) | C5—C6 | 1.373 (3) |
N1—H1N | 0.8600 | C5—H5 | 0.9300 |
N2—C8 | 1.371 (2) | C9—C10 | 1.477 (3) |
N2—C7 | 1.380 (2) | C9—H9A | 0.9700 |
N2—H2N | 0.8600 | C9—H9B | 0.9700 |
C1—C6 | 1.373 (3) | C10—H10A | 0.9600 |
C1—C2 | 1.381 (3) | C10—H10B | 0.9600 |
C1—H1A | 0.9300 | C10—H10C | 0.9600 |
C2—C3 | 1.368 (3) | ||
C8—O2—C9 | 116.07 (14) | C1—C6—C5 | 120.50 (16) |
C7—N1—C6 | 123.30 (14) | C1—C6—N1 | 119.11 (16) |
C7—N1—H1N | 118.3 | C5—C6—N1 | 120.37 (17) |
C6—N1—H1N | 118.3 | N1—C7—N2 | 116.75 (15) |
C8—N2—C7 | 128.04 (14) | N1—C7—S1 | 124.23 (13) |
C8—N2—H2N | 116.0 | N2—C7—S1 | 119.02 (12) |
C7—N2—H2N | 116.0 | O1—C8—O2 | 125.48 (16) |
C6—C1—C2 | 119.79 (19) | O1—C8—N2 | 125.56 (15) |
C6—C1—H1A | 120.1 | O2—C8—N2 | 108.95 (14) |
C2—C1—H1A | 120.1 | O2—C9—C10 | 107.51 (17) |
C3—C2—C1 | 120.2 (2) | O2—C9—H9A | 110.2 |
C3—C2—H2A | 119.9 | C10—C9—H9A | 110.2 |
C1—C2—H2A | 119.9 | O2—C9—H9B | 110.2 |
C4—C3—C2 | 119.70 (19) | C10—C9—H9B | 110.2 |
C4—C3—H3 | 120.1 | H9A—C9—H9B | 108.5 |
C2—C3—H3 | 120.1 | C9—C10—H10A | 109.5 |
C3—C4—C5 | 120.9 (2) | C9—C10—H10B | 109.5 |
C3—C4—H4 | 119.6 | H10A—C10—H10B | 109.5 |
C5—C4—H4 | 119.6 | C9—C10—H10C | 109.5 |
C6—C5—C4 | 118.94 (19) | H10A—C10—H10C | 109.5 |
C6—C5—H5 | 120.5 | H10B—C10—H10C | 109.5 |
C4—C5—H5 | 120.5 | ||
C6—C1—C2—C3 | −0.5 (3) | C6—N1—C7—N2 | −176.13 (17) |
C1—C2—C3—C4 | 0.5 (3) | C6—N1—C7—S1 | 4.3 (3) |
C2—C3—C4—C5 | −0.2 (3) | C8—N2—C7—N1 | −1.7 (3) |
C3—C4—C5—C6 | −0.1 (3) | C8—N2—C7—S1 | 177.86 (15) |
C2—C1—C6—C5 | 0.1 (3) | C9—O2—C8—O1 | 5.1 (3) |
C2—C1—C6—N1 | 178.19 (16) | C9—O2—C8—N2 | −176.35 (16) |
C4—C5—C6—C1 | 0.2 (3) | C7—N2—C8—O1 | −1.9 (3) |
C4—C5—C6—N1 | −177.87 (16) | C7—N2—C8—O2 | 179.57 (17) |
C7—N1—C6—C1 | 97.3 (2) | C8—O2—C9—C10 | 174.56 (19) |
C7—N1—C6—C5 | −84.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···S1i | 0.86 | 2.51 | 3.3556 (16) | 167 |
N1—H1N···O1ii | 0.86 | 2.52 | 3.2082 (19) | 138 |
N1—H1N···O1 | 0.86 | 2.02 | 2.697 (2) | 135 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H12N2O2S |
Mr | 224.28 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 5.787 (1), 10.218 (2), 10.501 (2) |
α, β, γ (°) | 109.39 (2), 94.41 (2), 100.04 (1) |
V (Å3) | 570.6 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.27 |
Crystal size (mm) | 0.58 × 0.44 × 0.30 |
Data collection | |
Diffractometer | Siemens P4 diffractometer |
Absorption correction | Empirical (using intensity measurements) (XSCANS; Siemens, 1994) |
Tmin, Tmax | 0.858, 0.923 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2611, 2277, 1823 |
Rint | 0.009 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.096, 1.06 |
No. of reflections | 2277 |
No. of parameters | 138 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.19, −0.28 |
Computer programs: XSCANS (Siemens, 1994), XSCANS, SHELXTL (Siemens, 1998), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···S1i | 0.86 | 2.51 | 3.3556 (16) | 167 |
N1—H1N···O1ii | 0.86 | 2.52 | 3.2082 (19) | 138 |
N1—H1N···O1 | 0.86 | 2.02 | 2.697 (2) | 135 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+2, −y+1, −z+1. |
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Thiourea compounds are excellent bioactive agents. A number of biological activities are associated with substituted thiourea derivatives (Schroeder, 1955; Antholine & Taketa, 1982), and some N-substituted-N'-alkoxycarbonylthiourea compounds have been used as antifungal agents. N-Substituted-N'-alkoxycarbonylthiourea compounds have also attracted considerable attention in recent years because of its coordination ability with transition metal ions such as CuI, ZnII and CdII (Shen et al., 1997). As a part of our work in researching the coordination behaviour, synthesis and biological activities of N-substituted-N'-alkoxycarbonylthioureas (Zhang et al., 2000, 2001), the crystal structure of the title compound, (I), was determined.
In the molecular structure of (I), the carbonyl and thiocarbonyl moieties point in approximately opposite directions. The compound adopts a cis–trans conformation, where the phenyl group and the ethoxycarbonyl moiety lie respectively cis and trans relative to the S atom across the thiourea C—N bonds. Both N—H atoms participate in the formation of hydrogen bonds. An intramolecular hydrogen bond exists between atoms N1 and O1 (Table 1).
The molecules are connected via N—H···O and N—H···S hydrogen bonds (Fig. 1 and Table 1) and pack in alternating orientations in a ribbon-like fashion approximately parallel to the b direction.
The molecular structure of (I) is analogous to that observed in the crystal structure of N-(o-nitrophenyl)-N'-methoxycarbonylthiourea (Shen, Shi, Kang, Liu et al., 1998) and N-(p-nitrophenyl)-N'-ethoxycarbonylthiourea (Shen, Shi, Kang, Tong et al., 1998). The existence of intramolecular hydrogen bonds in thiourea molecules has significant implications on their coordination properties (Bourne & Kock, 1993). In the coordination compound reported by Bourne & Koch (1993), namely cis-bis(N-benzoyl-N'-propylthiourea)dichloroplatinum(II), the two ligand molecules bind to PtII via the S atoms only, the carbonyl O atom being locked into position by hydrogen bonds similar to that in the free ligands.