Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805029089/tk6260sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536805029089/tk6260Isup2.hkl |
CCDC reference: 287738
Key indicators
- Single-crystal X-ray study
- T = 85 K
- Mean (C-C) = 0.003 Å
- R factor = 0.014
- wR factor = 0.036
- Data-to-parameter ratio = 18.8
checkCIF/PLATON results
No syntax errors found
Alert level C ABSTM02_ALERT_3_C The ratio of expected to reported Tmax/Tmin(RR) is > 1.10 Tmin and Tmax reported: 0.361 0.572 Tmin and Tmax expected: 0.275 0.572 RR = 1.315 Please check that your absorption correction is appropriate. PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT060_ALERT_3_C Ratio Tmax/Tmin (Exp-to-Rep) (too) Large ....... 1.33
Alert level G REFLT03_ALERT_1_G ALERT: Expected hkl max differ from CIF values From the CIF: _diffrn_reflns_theta_max 33.20 From the CIF: _reflns_number_total 3010 From the CIF: _diffrn_reflns_limit_ max hkl 10. 12. 13. From the CIF: _diffrn_reflns_limit_ min hkl -7. -11. -13. TEST1: Expected hkl limits for theta max Calculated maximum hkl 12. 13. 13. Calculated minimum hkl -12. -13. -13.
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion
Complex (I) precipitated on addition of one drop of 6 M NaClO4(aq) to a solution of [Pt(C10H8N2)2](NO3)2·H2O (53 mg), prepared according to McInnes et al. (2003) in water (1 ml) to which one equivalent of 1 M NaOH(aq) (84 ml) had been added. Dilution to approximately 20 ml with hot water and subsequent slow cooling gave (I) as small pale-yellow crystals.
All H atoms were included in the riding-model approximation, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C). The highest residual peak in the difference map is 0.79 Å from atom Pt1.
Data collection: APEX-II (Bruker, 2004); cell refinement: APEX-II and SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997 and SHELXTL (Bruker, 2001); software used to prepare material for publication: WinGX (Farrugia, 1999).
[Pt(C10H8N2)2](ClO4)2 | Z = 1 |
Mr = 706.35 | F(000) = 340 |
Triclinic, P1 | Dx = 2.227 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71069 Å |
a = 7.811 (5) Å | Cell parameters from 5644 reflections |
b = 8.621 (5) Å | θ = 2.4–33.0° |
c = 9.054 (5) Å | µ = 6.97 mm−1 |
α = 72.972 (5)° | T = 85 K |
β = 86.553 (5)° | Plate, pale-yellow |
γ = 64.960 (5)° | 0.32 × 0.16 × 0.08 mm |
V = 526.7 (5) Å3 |
Bruker Kappa-APEX-II area-detector diffractometer | 3010 independent reflections |
Radiation source: fine-focus sealed tube | 3010 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
ϕ and ω scans | θmax = 33.2°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −7→10 |
Tmin = 0.361, Tmax = 0.572 | k = −11→12 |
11349 measured reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.014 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.036 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0182P)2 + 0.2101P] where P = (Fo2 + 2Fc2)/3 |
3010 reflections | (Δ/σ)max < 0.001 |
160 parameters | Δρmax = 1.19 e Å−3 |
0 restraints | Δρmin = −1.34 e Å−3 |
[Pt(C10H8N2)2](ClO4)2 | γ = 64.960 (5)° |
Mr = 706.35 | V = 526.7 (5) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.811 (5) Å | Mo Kα radiation |
b = 8.621 (5) Å | µ = 6.97 mm−1 |
c = 9.054 (5) Å | T = 85 K |
α = 72.972 (5)° | 0.32 × 0.16 × 0.08 mm |
β = 86.553 (5)° |
Bruker Kappa-APEX-II area-detector diffractometer | 3010 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 3010 reflections with I > 2σ(I) |
Tmin = 0.361, Tmax = 0.572 | Rint = 0.028 |
11349 measured reflections |
R[F2 > 2σ(F2)] = 0.014 | 0 restraints |
wR(F2) = 0.036 | H-atom parameters constrained |
S = 1.08 | Δρmax = 1.19 e Å−3 |
3010 reflections | Δρmin = −1.34 e Å−3 |
160 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Pt1 | 0.0000 | 0.0000 | 0.0000 | 0.00959 (3) | |
Cl1 | 0.72870 (7) | 0.55282 (6) | 0.74243 (5) | 0.01562 (9) | |
O3 | 0.6723 (2) | 0.74430 (19) | 0.68472 (17) | 0.0190 (3) | |
O4 | 0.5894 (3) | 0.5191 (3) | 0.8406 (2) | 0.0298 (4) | |
O1 | 0.9085 (2) | 0.4714 (2) | 0.8310 (2) | 0.0302 (4) | |
N1 | −0.1963 (2) | −0.0954 (2) | 0.07318 (17) | 0.0107 (3) | |
O2 | 0.7429 (4) | 0.4830 (3) | 0.6145 (2) | 0.0413 (5) | |
C2 | −0.3843 (3) | −0.2526 (3) | 0.0693 (2) | 0.0148 (3) | |
H2 | −0.4358 | −0.3007 | 0.0147 | 0.018* | |
C4 | −0.3484 (3) | −0.1824 (3) | 0.2993 (2) | 0.0142 (3) | |
H4 | −0.3730 | −0.1858 | 0.4017 | 0.017* | |
N2 | −0.1036 (2) | 0.1103 (2) | 0.17412 (17) | 0.0113 (3) | |
C8 | −0.2114 (3) | 0.1948 (3) | 0.4482 (2) | 0.0152 (4) | |
H8 | −0.2407 | 0.2189 | 0.5425 | 0.018* | |
C9 | −0.1373 (3) | 0.2933 (3) | 0.3368 (2) | 0.0145 (3) | |
H9 | −0.1217 | 0.3881 | 0.3534 | 0.017* | |
C1 | −0.2730 (3) | −0.1673 (2) | −0.0017 (2) | 0.0128 (3) | |
H1 | −0.2502 | −0.1592 | −0.1051 | 0.015* | |
C10 | −0.0865 (3) | 0.2491 (2) | 0.2004 (2) | 0.0135 (3) | |
H10 | −0.0392 | 0.3171 | 0.1249 | 0.016* | |
C3 | −0.4180 (3) | −0.2651 (3) | 0.2239 (2) | 0.0154 (4) | |
H3 | −0.4861 | −0.3281 | 0.2761 | 0.018* | |
C7 | −0.2414 (3) | 0.0596 (3) | 0.4169 (2) | 0.0137 (3) | |
H7 | −0.2956 | −0.0050 | 0.4884 | 0.016* | |
C6 | −0.1895 (3) | 0.0221 (2) | 0.2780 (2) | 0.0115 (3) | |
C5 | −0.2424 (3) | −0.0950 (2) | 0.2205 (2) | 0.0119 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Pt1 | 0.01102 (5) | 0.00998 (5) | 0.00989 (5) | −0.00593 (4) | 0.00202 (3) | −0.00391 (3) |
Cl1 | 0.0217 (2) | 0.0170 (2) | 0.01378 (18) | −0.01234 (18) | 0.00363 (16) | −0.00656 (15) |
O3 | 0.0224 (7) | 0.0149 (6) | 0.0192 (6) | −0.0078 (6) | −0.0016 (6) | −0.0038 (5) |
O4 | 0.0348 (10) | 0.0429 (10) | 0.0297 (8) | −0.0320 (8) | 0.0123 (7) | −0.0143 (7) |
O1 | 0.0205 (8) | 0.0213 (8) | 0.0394 (9) | −0.0071 (7) | −0.0057 (7) | 0.0029 (7) |
N1 | 0.0113 (7) | 0.0108 (6) | 0.0121 (6) | −0.0065 (6) | 0.0020 (5) | −0.0036 (5) |
O2 | 0.0820 (16) | 0.0377 (10) | 0.0229 (8) | −0.0363 (11) | 0.0158 (9) | −0.0208 (8) |
C2 | 0.0136 (8) | 0.0154 (8) | 0.0181 (8) | −0.0070 (7) | 0.0011 (7) | −0.0076 (7) |
C4 | 0.0150 (8) | 0.0151 (8) | 0.0143 (8) | −0.0079 (7) | 0.0033 (7) | −0.0049 (6) |
N2 | 0.0116 (7) | 0.0121 (7) | 0.0125 (6) | −0.0066 (6) | 0.0017 (5) | −0.0045 (5) |
C8 | 0.0139 (8) | 0.0185 (9) | 0.0156 (8) | −0.0064 (7) | 0.0026 (7) | −0.0094 (7) |
C9 | 0.0138 (9) | 0.0133 (8) | 0.0191 (8) | −0.0058 (7) | 0.0015 (7) | −0.0087 (6) |
C1 | 0.0120 (8) | 0.0135 (8) | 0.0139 (7) | −0.0048 (7) | 0.0008 (6) | −0.0064 (6) |
C10 | 0.0127 (8) | 0.0123 (8) | 0.0168 (8) | −0.0062 (7) | 0.0019 (7) | −0.0051 (6) |
C3 | 0.0151 (9) | 0.0154 (8) | 0.0195 (9) | −0.0094 (7) | 0.0042 (7) | −0.0067 (7) |
C7 | 0.0128 (8) | 0.0161 (8) | 0.0134 (8) | −0.0067 (7) | 0.0024 (6) | −0.0055 (6) |
C6 | 0.0101 (8) | 0.0116 (7) | 0.0132 (7) | −0.0048 (6) | 0.0011 (6) | −0.0041 (6) |
C5 | 0.0109 (8) | 0.0125 (8) | 0.0123 (7) | −0.0047 (7) | 0.0010 (6) | −0.0042 (6) |
Pt1—N1i | 2.0227 (18) | C4—H4 | 0.9300 |
Pt1—N1 | 2.0227 (18) | N2—C10 | 1.346 (2) |
Pt1—N2 | 2.0292 (17) | N2—C6 | 1.360 (2) |
Pt1—N2i | 2.0292 (17) | C8—C9 | 1.385 (3) |
Cl1—O2 | 1.4328 (18) | C8—C7 | 1.387 (3) |
Cl1—O4 | 1.4350 (18) | C8—H8 | 0.9300 |
Cl1—O1 | 1.4420 (19) | C9—C10 | 1.384 (3) |
Cl1—O3 | 1.4488 (17) | C9—H9 | 0.9300 |
N1—C1 | 1.346 (2) | C1—H1 | 0.9300 |
N1—C5 | 1.362 (2) | C10—H10 | 0.9300 |
C2—C1 | 1.381 (3) | C3—H3 | 0.9300 |
C2—C3 | 1.389 (3) | C7—C6 | 1.385 (3) |
C2—H2 | 0.9300 | C7—H7 | 0.9300 |
C4—C5 | 1.380 (3) | C6—C5 | 1.465 (3) |
C4—C3 | 1.388 (3) | ||
N1i—Pt1—N1 | 180.00 (8) | C9—C8—C7 | 118.97 (17) |
N1i—Pt1—N2 | 101.17 (7) | C9—C8—H8 | 120.5 |
N1—Pt1—N2 | 78.83 (7) | C7—C8—H8 | 120.5 |
N1i—Pt1—N2i | 78.83 (7) | C10—C9—C8 | 119.34 (18) |
N1—Pt1—N2i | 101.17 (7) | C10—C9—H9 | 120.3 |
N2—Pt1—N2i | 180.00 (10) | C8—C9—H9 | 120.3 |
O2—Cl1—O4 | 109.56 (12) | N1—C1—C2 | 122.41 (17) |
O2—Cl1—O1 | 110.92 (13) | N1—C1—H1 | 118.8 |
O4—Cl1—O1 | 109.44 (12) | C2—C1—H1 | 118.8 |
O2—Cl1—O3 | 109.35 (11) | N2—C10—C9 | 121.75 (18) |
O4—Cl1—O3 | 109.29 (11) | N2—C10—H10 | 119.1 |
O1—Cl1—O3 | 108.25 (10) | C9—C10—H10 | 119.1 |
C1—N1—C5 | 118.46 (16) | C4—C3—C2 | 119.06 (18) |
C1—N1—Pt1 | 127.86 (13) | C4—C3—H3 | 120.5 |
C5—N1—Pt1 | 113.52 (12) | C2—C3—H3 | 120.5 |
C1—C2—C3 | 118.82 (18) | C6—C7—C8 | 119.21 (18) |
C1—C2—H2 | 120.6 | C6—C7—H7 | 120.4 |
C3—C2—H2 | 120.6 | C8—C7—H7 | 120.4 |
C5—C4—C3 | 119.23 (17) | N2—C6—C7 | 121.46 (17) |
C5—C4—H4 | 120.4 | N2—C6—C5 | 114.00 (16) |
C3—C4—H4 | 120.4 | C7—C6—C5 | 124.07 (17) |
C10—N2—C6 | 118.88 (16) | N1—C5—C4 | 121.63 (17) |
C10—N2—Pt1 | 127.63 (13) | N1—C5—C6 | 114.01 (16) |
C6—N2—Pt1 | 113.36 (12) | C4—C5—C6 | 123.97 (16) |
Symmetry code: (i) −x, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | [Pt(C10H8N2)2](ClO4)2 |
Mr | 706.35 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 85 |
a, b, c (Å) | 7.811 (5), 8.621 (5), 9.054 (5) |
α, β, γ (°) | 72.972 (5), 86.553 (5), 64.960 (5) |
V (Å3) | 526.7 (5) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 6.97 |
Crystal size (mm) | 0.32 × 0.16 × 0.08 |
Data collection | |
Diffractometer | Bruker Kappa-APEX-II area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.361, 0.572 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11349, 3010, 3010 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.770 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.014, 0.036, 1.08 |
No. of reflections | 3010 |
No. of parameters | 160 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.19, −1.34 |
Computer programs: APEX-II (Bruker, 2004), APEX-II and SAINT (Bruker, 2001), SAINT, SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 1997), ORTEP-3 (Farrugia, 1997 and SHELXTL (Bruker, 2001), WinGX (Farrugia, 1999).
Subscribe to Acta Crystallographica Section E: Crystallographic Communications
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- If you have already subscribed, you may need to register
The title complex, (I) (Fig. 1), was obtained during a study of the reactivity of [Pt(C10H8N2)2]2+ in aqueous alkaline solution (McInnes et al., 2003). Complex (I) crystallizes in the triclinic space group P1 with the Pt ion lying on an inversion centre, thus requiring it to be strictly coplanar with the four attached N atoms. The Pt—N distances [2.0227 (18) and 2.0292 (17) Å] are similar to those found in [Pt(C10H8N2)2](NO3)2·H2O (Hazell et al., 1986) and [Pt(C10H8N2)2](CF3SO3)2 (Fedotova et al., 2003), and are typical of those found in Pt complexes containing pyridine ligands (mean = 2.064 Å, SD = 0.074 Å for 997 structurally characterized complexes and 2214 individual Pt—N distances; Cambridge Structural Database, Version 5.26 of November 2004 (Allen, 2002)]. The 2,2'-bipyridine ligands display a bow distortion (Fig. 2) with a remarkably large angle of 20.52 (11)° between the mean planes of the two rings (Hazell, 2004). A similar distortion is seen in the trifluoromethanesulfonate salt of the complex (Fedotova et al., 2003) and presumably prevents the close inter-ligand approach of atoms H1 and H10. It is tempting to speculate that the strain inherent in such a distortion is responsible for the unusual behaviour of [Pt(C10H8N2)2]2+ in aqueous alkaline solution, allowing facile coordination of hydroxide ion to give a pseudo-five-coordinate complex (McInnes et al., 2003).
There are weak π-stacking interactions throughout the three-dimensional structure (Fig. 3), with centroid-to-centroid distances between the pyridine rings of 3.703 (3) (−1 − x, −y, −z) and 3.924 (3) Å (−x, −y, 1 − z). The perchlorate ions are also involved in anion–π interactions, with O1–centroid (at 1 + x, y, 1 + z) and O4–centroid (at −x, 1 − y, 1 − z) distances of 3.064 (3) and 3.356 (3) Å, respectively.