Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807033594/ww2088sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807033594/ww2088Isup2.hkl |
CCDC reference: 657764
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.003 Å
- R factor = 0.045
- wR factor = 0.125
- Data-to-parameter ratio = 12.3
checkCIF/PLATON results
No syntax errors found
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 29.99 From the CIF: _reflns_number_total 2537 Count of symmetry unique reflns 2581 Completeness (_total/calc) 98.30% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present no PLAT791_ALERT_1_G Confirm the Absolute Configuration of C4A = . S PLAT791_ALERT_1_G Confirm the Absolute Configuration of C10A = . R PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 1
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 0 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For related literature, see: Atta-Ur-Rahman & Choudary (1999); Barrero et al. (2003); Bellakhdar (1997); Comte et al. (1995); Cremer & Pople (1975); Evidente et al. (1997); Lawsen et al. (1988); Macias et al. (2000); Panter et al. (2002); Vlietinck (1987); Zeroual et al. (2007).
Continuous extraction with hexane employing a soxhlet apparatus during 48 h of Tetraclinis articulata wood let us, after evaporation of hexane and chromatography using silica gel column with hexane/ethyl acetate (97/3) as an eluent, to isolate compound (I) in 75% yield. Suitable crystals of (I) were obtained by evaporation of a dichloromethane solution at 277 K. m.p. = 444–445 K (dichloromethane); Spectroscopic analysis: 1H NMR (300 MHz, CDCl3, δ, p.p.m.): 2.21 (2H, H3, m), 2.04 (2H, H4, m), 6.90 (1H, H5, d, J = 8.4 Hz), 6.50 (1H, H6, d, J = 8.4 Hz), 4.85 (OH, s), 2.85 (2H, H9, m), 1.56 (2H, H10, m), 1.78 (1H, H10a, dd, J1 = 10.7 Hz, J2 = 1.9 Hz), 3.10 (1H, H11, m), 1.28 (3H, H12, d, J = 10 Hz), 1.30 (3H, H13, d, J = 10 Hz), 1.42 (3H, H14, s), 1.11 (3H, H15, s), 1.08 (3H, H16, s); 13C NMR (75 MHz, CDCl3, δ, p.p.m.): 47.5 (C1), 218.5 (C2), 38.3 (C3), 34.8 (C4), 37.5 (C4a), 131.3 (C4b), 124.0 (C5), 115.0 (C6), 152.9 (C7), 159.6 (C8), 140.1 (C8a), 28.9 (C9), 21.0 (C10), 49.8 (C10a), 26.8 (C11), 20.1 (C12), 20.2 (C13), 22.4 (C14), 24.8 (C15), 21.2 (C16).
Except H11 and O—H hydrogen atom, which were placed by Fourier synthesis C11—H11=0.99 (4) Å; O—H = 0.81 (4) Å), all H atoms attached to carbon atoms were fixed geometrically and treated as riding with C—H = 0.93 Å (aromatic), 0.96Å (methyl), 0.97 Å (methylene), and 0.98Å (methine) with Uiso(H) =1.2Ueq(aromatic, methylene, methine and OH) or Uiso(H) = 1.5Ueq(methyl).
In the absence of significant anomalous scattering, the absolute configuration could not be reliably determined and thus the Friedel pairs were merged and any references to the Flack parameter were removed.
Natural products, through evolution of producing organisms have many biological activities that are manifested through an array of different molecular target sites. Thus, diterpenoids isolated from plants have good pharmacological activities (Atta-Ur-Rahman & Choudary, 1999, Panter et al., 2002). The duvatriene-diols from tobacco leaf surfaces are phytotoxics to serious weed Echinocloa crus-galli (Lawsen et al., 1988). Some of them have been suggested as herbicides (Macias et al., 2000). In our study, we are interested to the aromatic and medicinal plant: Tetraclinis articulata which was subsequently used in traditional medicine (Bellakhdar, 1997). Some of its oxygenated compounds are effective as an antibiotic (Vlietinck, 1987), antifongic (Evidente et al., 1997), cytotoxic (Comte et al., 1995) and inhibit various human leukocyte functions (Barrero et al., 2003). In order to isolate similar compounds, we have studied the hexanic extract of Tetraclinis articulata wood. Thus, extraction with hexane using a soxhlet apparatus allow us to isolate compound (I), new diterpenic isomer of (4aS,6cS)-8-Hydroxy-9-isopropyl-4,4,6c-trimethyl-1,2,3,4,4a,5,6, 6c-octahydrophenanthren-3-one (Zeroual et al., 2007). The structure of (I) was established by 1H and 13C NMR and confirmed by its single-crystal X-ray structure.
The molecule (I) is built up from three fused six-membered rings. The non aromatic oxo-substituted ring has a screw boat conformation, as indicated by the total puckering amplitude QT = 0.63 (2)Å and spherical polar angle θ =-82.16 (2)° with φ = 76.89 (2)°. While the central ring has a half chair conformation with QT = 0.53 (2) Å, θ =127.66 (2)°, φ = 151.53 (2)° (Cremer & Pople, 1975). Molecules are linked by intermolecular O—H···O hydrogen bonds (Table 1, Figure 2) involving the carbonyl and the hydroxyl groups and propagate in chain parallel to the (101) plane.
For related literature, see: Atta-Ur-Rahman & Choudary (1999); Barrero et al. (2003); Bellakhdar (1997); Comte et al. (1995); Cremer & Pople (1975); Evidente et al. (1997); Lawsen et al. (1988); Macias et al. (2000); Panter et al. (2002); Vlietinck (1987); Zeroual et al. (2007).
Data collection: COLLECT (Bruker–Nonius, 2006); cell refinement: DENZO AND SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO AND SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
C20H28O2 | F(000) = 328 |
Mr = 300.42 | Dx = 1.172 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 2550 reflections |
a = 7.1873 (4) Å | θ = 3.5–30.0° |
b = 14.2273 (9) Å | µ = 0.07 mm−1 |
c = 8.3860 (4) Å | T = 298 K |
β = 96.952 (4)° | Prism, colourless |
V = 851.21 (8) Å3 | 0.30 × 0.25 × 0.20 mm |
Z = 2 |
Bruker–Nonius KappaCCD area-detector diffractometer | 2329 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.034 |
Graphite monochromator | θmax = 30.0°, θmin = 2.9° |
φ and ω scans | h = 0→10 |
10680 measured reflections | k = 0→20 |
2537 independent reflections | l = −11→11 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.126 | w = 1/[σ2(Fo2) + (0.0779P)2 + 0.0844P] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max < 0.001 |
2537 reflections | Δρmax = 0.19 e Å−3 |
207 parameters | Δρmin = −0.19 e Å−3 |
1 restraint | Absolute structure: unknown - see Supplementary Materials - Refinement section |
Primary atom site location: structure-invariant direct methods |
C20H28O2 | V = 851.21 (8) Å3 |
Mr = 300.42 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 7.1873 (4) Å | µ = 0.07 mm−1 |
b = 14.2273 (9) Å | T = 298 K |
c = 8.3860 (4) Å | 0.30 × 0.25 × 0.20 mm |
β = 96.952 (4)° |
Bruker–Nonius KappaCCD area-detector diffractometer | 2329 reflections with I > 2σ(I) |
10680 measured reflections | Rint = 0.034 |
2537 independent reflections |
R[F2 > 2σ(F2)] = 0.045 | 1 restraint |
wR(F2) = 0.126 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.19 e Å−3 |
2537 reflections | Δρmin = −0.19 e Å−3 |
207 parameters | Absolute structure: unknown - see Supplementary Materials - Refinement section |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
H | 0.542 (5) | 0.581 (3) | 0.585 (4) | 0.069 (10)* | |
H11 | 0.665 (4) | 0.334 (3) | 0.265 (4) | 0.068 (9)* | |
C1 | 1.2274 (3) | 0.52902 (14) | −0.1588 (2) | 0.0380 (4) | |
C2 | 1.3486 (3) | 0.61648 (15) | −0.1271 (2) | 0.0398 (4) | |
C3 | 1.3735 (3) | 0.6564 (2) | 0.0381 (3) | 0.0542 (6) | |
H3A | 1.4179 | 0.7205 | 0.0311 | 0.065* | |
H3B | 1.4722 | 0.6212 | 0.1009 | 0.065* | |
C4 | 1.2054 (3) | 0.65802 (17) | 0.1310 (3) | 0.0471 (5) | |
H4A | 1.1733 | 0.7230 | 0.1499 | 0.057* | |
H4B | 1.2404 | 0.6289 | 0.2349 | 0.057* | |
C4A | 1.0296 (2) | 0.60751 (12) | 0.0471 (2) | 0.0330 (3) | |
C4B | 0.8971 (2) | 0.58501 (12) | 0.1734 (2) | 0.0332 (3) | |
C5 | 0.8517 (3) | 0.65705 (14) | 0.2743 (2) | 0.0411 (4) | |
H5 | 0.8987 | 0.7170 | 0.2608 | 0.049* | |
C6 | 0.7385 (3) | 0.64173 (15) | 0.3939 (2) | 0.0448 (4) | |
H6 | 0.7078 | 0.6913 | 0.4582 | 0.054* | |
C7 | 0.6712 (3) | 0.55241 (15) | 0.4172 (2) | 0.0428 (4) | |
C8 | 0.7087 (3) | 0.47748 (13) | 0.3179 (2) | 0.0371 (4) | |
C8A | 0.8209 (2) | 0.49546 (13) | 0.1932 (2) | 0.0330 (3) | |
C9 | 0.8596 (3) | 0.41598 (13) | 0.0819 (2) | 0.0394 (4) | |
H9A | 0.9486 | 0.3730 | 0.1394 | 0.047* | |
H9B | 0.7442 | 0.3816 | 0.0514 | 0.047* | |
C10 | 0.9367 (3) | 0.44883 (15) | −0.0687 (2) | 0.0412 (4) | |
H10A | 0.8390 | 0.4804 | −0.1389 | 0.049* | |
H10B | 0.9793 | 0.3952 | −0.1258 | 0.049* | |
C10A | 1.0988 (2) | 0.51580 (12) | −0.02329 (19) | 0.0333 (3) | |
H10 | 1.1775 | 0.4853 | 0.0654 | 0.040* | |
C11 | 0.6362 (3) | 0.37951 (16) | 0.3478 (3) | 0.0441 (4) | |
C12 | 0.4239 (4) | 0.3730 (2) | 0.3432 (4) | 0.0662 (7) | |
H12A | 0.3892 | 0.3092 | 0.3627 | 0.099* | |
H12B | 0.3653 | 0.3926 | 0.2396 | 0.099* | |
H12C | 0.3836 | 0.4131 | 0.4245 | 0.099* | |
C13 | 0.7334 (5) | 0.3358 (2) | 0.5020 (4) | 0.0752 (9) | |
H13A | 0.6838 | 0.2741 | 0.5154 | 0.113* | |
H13B | 0.7120 | 0.3744 | 0.5920 | 0.113* | |
H13C | 0.8656 | 0.3316 | 0.4956 | 0.113* | |
C14 | 0.9273 (3) | 0.67265 (15) | −0.0801 (3) | 0.0469 (5) | |
H14A | 0.8182 | 0.6413 | −0.1323 | 0.070* | |
H14B | 1.0095 | 0.6884 | −0.1582 | 0.070* | |
H14C | 0.8902 | 0.7290 | −0.0296 | 0.070* | |
C15 | 1.3668 (3) | 0.44607 (19) | −0.1482 (3) | 0.0574 (6) | |
H15A | 1.2991 | 0.3882 | −0.1670 | 0.086* | |
H15B | 1.4370 | 0.4447 | −0.0433 | 0.086* | |
H15C | 1.4511 | 0.4537 | −0.2277 | 0.086* | |
C16 | 1.1232 (3) | 0.5328 (2) | −0.3292 (2) | 0.0567 (6) | |
H16A | 1.0469 | 0.4776 | −0.3484 | 0.085* | |
H16B | 1.2124 | 0.5354 | −0.4055 | 0.085* | |
H16C | 1.0450 | 0.5877 | −0.3403 | 0.085* | |
O1 | 0.5674 (3) | 0.53377 (15) | 0.5392 (2) | 0.0646 (5) | |
O2 | 1.4340 (3) | 0.65004 (15) | −0.2306 (2) | 0.0618 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0377 (8) | 0.0433 (9) | 0.0349 (7) | −0.0009 (7) | 0.0115 (6) | −0.0001 (7) |
C2 | 0.0321 (8) | 0.0469 (10) | 0.0419 (9) | −0.0007 (7) | 0.0105 (7) | 0.0037 (8) |
C3 | 0.0420 (10) | 0.0700 (15) | 0.0520 (11) | −0.0190 (11) | 0.0122 (8) | −0.0117 (11) |
C4 | 0.0409 (9) | 0.0522 (11) | 0.0501 (10) | −0.0126 (9) | 0.0134 (8) | −0.0140 (9) |
C4A | 0.0323 (7) | 0.0311 (8) | 0.0374 (8) | −0.0010 (6) | 0.0109 (6) | −0.0013 (6) |
C4B | 0.0318 (7) | 0.0329 (8) | 0.0364 (8) | 0.0007 (6) | 0.0096 (6) | −0.0019 (6) |
C5 | 0.0442 (9) | 0.0332 (8) | 0.0485 (10) | −0.0014 (8) | 0.0158 (7) | −0.0053 (8) |
C6 | 0.0502 (10) | 0.0429 (10) | 0.0441 (9) | 0.0036 (8) | 0.0174 (8) | −0.0090 (8) |
C7 | 0.0456 (10) | 0.0486 (11) | 0.0371 (9) | 0.0021 (8) | 0.0166 (7) | −0.0007 (8) |
C8 | 0.0405 (9) | 0.0358 (9) | 0.0365 (8) | −0.0020 (7) | 0.0111 (7) | 0.0016 (7) |
C8A | 0.0325 (7) | 0.0332 (8) | 0.0343 (7) | 0.0013 (6) | 0.0084 (6) | −0.0006 (6) |
C9 | 0.0464 (9) | 0.0308 (8) | 0.0441 (9) | −0.0048 (7) | 0.0177 (7) | −0.0041 (7) |
C10 | 0.0459 (9) | 0.0392 (9) | 0.0410 (9) | −0.0073 (8) | 0.0163 (7) | −0.0085 (7) |
C10A | 0.0341 (7) | 0.0334 (8) | 0.0340 (7) | 0.0004 (6) | 0.0105 (6) | −0.0009 (6) |
C11 | 0.0513 (11) | 0.0418 (10) | 0.0414 (9) | −0.0049 (8) | 0.0141 (8) | 0.0063 (8) |
C12 | 0.0557 (13) | 0.0660 (16) | 0.0774 (17) | −0.0132 (12) | 0.0109 (12) | 0.0178 (13) |
C13 | 0.089 (2) | 0.0552 (15) | 0.0755 (17) | −0.0051 (14) | −0.0143 (15) | 0.0209 (14) |
C14 | 0.0488 (10) | 0.0403 (10) | 0.0529 (11) | 0.0029 (8) | 0.0117 (9) | 0.0112 (8) |
C15 | 0.0601 (13) | 0.0531 (12) | 0.0656 (14) | 0.0122 (11) | 0.0343 (11) | 0.0053 (11) |
C16 | 0.0524 (11) | 0.0832 (17) | 0.0358 (9) | −0.0141 (12) | 0.0105 (8) | −0.0057 (10) |
O1 | 0.0843 (13) | 0.0630 (11) | 0.0551 (9) | −0.0062 (10) | 0.0440 (9) | −0.0062 (9) |
O2 | 0.0670 (10) | 0.0661 (11) | 0.0576 (9) | −0.0202 (9) | 0.0293 (8) | −0.0013 (8) |
C1—C2 | 1.524 (3) | C9—C10 | 1.513 (3) |
C1—C16 | 1.532 (3) | C9—H9A | 0.9700 |
C1—C15 | 1.544 (3) | C9—H9B | 0.9700 |
C1—C10A | 1.560 (2) | C10—C10A | 1.518 (2) |
C2—O2 | 1.219 (2) | C10—H10A | 0.9700 |
C2—C3 | 1.488 (3) | C10—H10B | 0.9700 |
C3—C4 | 1.515 (3) | C10A—H10 | 0.9800 |
C3—H3A | 0.9700 | C11—C12 | 1.525 (3) |
C3—H3B | 0.9700 | C11—C13 | 1.526 (3) |
C4—C4A | 1.547 (3) | C11—H11 | 0.99 (4) |
C4—H4A | 0.9700 | C12—H12A | 0.9600 |
C4—H4B | 0.9700 | C12—H12B | 0.9600 |
C4A—C14 | 1.532 (3) | C12—H12C | 0.9600 |
C4A—C10A | 1.539 (2) | C13—H13A | 0.9600 |
C4A—C4B | 1.541 (2) | C13—H13B | 0.9600 |
C4B—C5 | 1.392 (2) | C13—H13C | 0.9600 |
C4B—C8A | 1.405 (2) | C14—H14A | 0.9600 |
C5—C6 | 1.383 (3) | C14—H14B | 0.9600 |
C5—H5 | 0.9300 | C14—H14C | 0.9600 |
C6—C7 | 1.382 (3) | C15—H15A | 0.9600 |
C6—H6 | 0.9300 | C15—H15B | 0.9600 |
C7—O1 | 1.363 (2) | C15—H15C | 0.9600 |
C7—C8 | 1.399 (3) | C16—H16A | 0.9600 |
C8—C8A | 1.419 (2) | C16—H16B | 0.9600 |
C8—C11 | 1.519 (3) | C16—H16C | 0.9600 |
C8A—C9 | 1.513 (2) | O1—H | 0.81 (4) |
C2—C1—C16 | 109.82 (18) | H9A—C9—H9B | 107.7 |
C2—C1—C15 | 105.10 (17) | C9—C10—C10A | 109.39 (15) |
C16—C1—C15 | 108.72 (19) | C9—C10—H10A | 109.8 |
C2—C1—C10A | 110.36 (14) | C10A—C10—H10A | 109.8 |
C16—C1—C10A | 114.69 (15) | C9—C10—H10B | 109.8 |
C15—C1—C10A | 107.67 (15) | C10A—C10—H10B | 109.8 |
O2—C2—C3 | 119.9 (2) | H10A—C10—H10B | 108.2 |
O2—C2—C1 | 121.45 (19) | C10—C10A—C4A | 110.77 (14) |
C3—C2—C1 | 118.43 (17) | C10—C10A—C1 | 113.42 (14) |
C2—C3—C4 | 118.09 (17) | C4A—C10A—C1 | 115.10 (14) |
C2—C3—H3A | 107.8 | C10—C10A—H10 | 105.5 |
C4—C3—H3A | 107.8 | C4A—C10A—H10 | 105.5 |
C2—C3—H3B | 107.8 | C1—C10A—H10 | 105.5 |
C4—C3—H3B | 107.8 | C8—C11—C12 | 114.4 (2) |
H3A—C3—H3B | 107.1 | C8—C11—C13 | 112.5 (2) |
C3—C4—C4A | 114.68 (16) | C12—C11—C13 | 110.5 (2) |
C3—C4—H4A | 108.6 | C8—C11—H11 | 112 (2) |
C4A—C4—H4A | 108.6 | C12—C11—H11 | 103.9 (17) |
C3—C4—H4B | 108.6 | C13—C11—H11 | 102.5 (18) |
C4A—C4—H4B | 108.6 | C11—C12—H12A | 109.5 |
H4A—C4—H4B | 107.6 | C11—C12—H12B | 109.5 |
C14—C4A—C10A | 113.31 (15) | H12A—C12—H12B | 109.5 |
C14—C4A—C4B | 108.67 (14) | C11—C12—H12C | 109.5 |
C10A—C4A—C4B | 110.03 (13) | H12A—C12—H12C | 109.5 |
C14—C4A—C4 | 109.42 (16) | H12B—C12—H12C | 109.5 |
C10A—C4A—C4 | 106.51 (15) | C11—C13—H13A | 109.5 |
C4B—C4A—C4 | 108.80 (14) | C11—C13—H13B | 109.5 |
C5—C4B—C8A | 118.19 (15) | H13A—C13—H13B | 109.5 |
C5—C4B—C4A | 118.32 (15) | C11—C13—H13C | 109.5 |
C8A—C4B—C4A | 123.49 (14) | H13A—C13—H13C | 109.5 |
C6—C5—C4B | 121.75 (18) | H13B—C13—H13C | 109.5 |
C6—C5—H5 | 119.1 | C4A—C14—H14A | 109.5 |
C4B—C5—H5 | 119.1 | C4A—C14—H14B | 109.5 |
C7—C6—C5 | 119.62 (18) | H14A—C14—H14B | 109.5 |
C7—C6—H6 | 120.2 | C4A—C14—H14C | 109.5 |
C5—C6—H6 | 120.2 | H14A—C14—H14C | 109.5 |
O1—C7—C6 | 121.19 (19) | H14B—C14—H14C | 109.5 |
O1—C7—C8 | 117.43 (19) | C1—C15—H15A | 109.5 |
C6—C7—C8 | 121.37 (16) | C1—C15—H15B | 109.5 |
C7—C8—C8A | 117.96 (16) | H15A—C15—H15B | 109.5 |
C7—C8—C11 | 120.44 (16) | C1—C15—H15C | 109.5 |
C8A—C8—C11 | 121.56 (16) | H15A—C15—H15C | 109.5 |
C4B—C8A—C8 | 120.99 (15) | H15B—C15—H15C | 109.5 |
C4B—C8A—C9 | 120.11 (15) | C1—C16—H16A | 109.5 |
C8—C8A—C9 | 118.89 (15) | C1—C16—H16B | 109.5 |
C10—C9—C8A | 113.39 (16) | H16A—C16—H16B | 109.5 |
C10—C9—H9A | 108.9 | C1—C16—H16C | 109.5 |
C8A—C9—H9A | 108.9 | H16A—C16—H16C | 109.5 |
C10—C9—H9B | 108.9 | H16B—C16—H16C | 109.5 |
C8A—C9—H9B | 108.9 | C7—O1—H | 112 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H···O2i | 0.81 (4) | 2.06 (4) | 2.799 (3) | 152 (4) |
Symmetry code: (i) x−1, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H28O2 |
Mr | 300.42 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 298 |
a, b, c (Å) | 7.1873 (4), 14.2273 (9), 8.3860 (4) |
β (°) | 96.952 (4) |
V (Å3) | 851.21 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.30 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker–Nonius KappaCCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10680, 2537, 2329 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.126, 1.09 |
No. of reflections | 2537 |
No. of parameters | 207 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.19, −0.19 |
Absolute structure | Unknown - see Supplementary Materials - Refinement section |
Computer programs: COLLECT (Bruker–Nonius, 2006), DENZO AND SCALEPACK (Otwinowski & Minor, 1997), DENZO AND SCALEPACK, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H···O2i | 0.81 (4) | 2.06 (4) | 2.799 (3) | 152 (4) |
Symmetry code: (i) x−1, y, z+1. |
Subscribe to Acta Crystallographica Section E: Crystallographic Communications
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- If you have already subscribed, you may need to register
Natural products, through evolution of producing organisms have many biological activities that are manifested through an array of different molecular target sites. Thus, diterpenoids isolated from plants have good pharmacological activities (Atta-Ur-Rahman & Choudary, 1999, Panter et al., 2002). The duvatriene-diols from tobacco leaf surfaces are phytotoxics to serious weed Echinocloa crus-galli (Lawsen et al., 1988). Some of them have been suggested as herbicides (Macias et al., 2000). In our study, we are interested to the aromatic and medicinal plant: Tetraclinis articulata which was subsequently used in traditional medicine (Bellakhdar, 1997). Some of its oxygenated compounds are effective as an antibiotic (Vlietinck, 1987), antifongic (Evidente et al., 1997), cytotoxic (Comte et al., 1995) and inhibit various human leukocyte functions (Barrero et al., 2003). In order to isolate similar compounds, we have studied the hexanic extract of Tetraclinis articulata wood. Thus, extraction with hexane using a soxhlet apparatus allow us to isolate compound (I), new diterpenic isomer of (4aS,6cS)-8-Hydroxy-9-isopropyl-4,4,6c-trimethyl-1,2,3,4,4a,5,6, 6c-octahydrophenanthren-3-one (Zeroual et al., 2007). The structure of (I) was established by 1H and 13C NMR and confirmed by its single-crystal X-ray structure.
The molecule (I) is built up from three fused six-membered rings. The non aromatic oxo-substituted ring has a screw boat conformation, as indicated by the total puckering amplitude QT = 0.63 (2)Å and spherical polar angle θ =-82.16 (2)° with φ = 76.89 (2)°. While the central ring has a half chair conformation with QT = 0.53 (2) Å, θ =127.66 (2)°, φ = 151.53 (2)° (Cremer & Pople, 1975). Molecules are linked by intermolecular O—H···O hydrogen bonds (Table 1, Figure 2) involving the carbonyl and the hydroxyl groups and propagate in chain parallel to the (101) plane.