Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807041608/xu2317sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807041608/xu2317Isup2.hkl |
CCDC reference: 660370
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.007 Å
- R factor = 0.059
- wR factor = 0.169
- Data-to-parameter ratio = 9.6
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT026_ALERT_3_C Ratio Observed / Unique Reflections too Low .... 42 Perc. PLAT088_ALERT_3_C Poor Data / Parameter Ratio .................... 9.57 PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.42 Ratio PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.81 Ratio PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C2' PLAT245_ALERT_2_C U(iso) H6 Smaller than U(eq) C6 by ... 0.01 AngSq PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 7 PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 5 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2 C14 H13 N O2
Alert level G PLAT793_ALERT_1_G Check the Absolute Configuration of C3A' = ... S PLAT793_ALERT_1_G Check the Absolute Configuration of C3A = ... S PLAT793_ALERT_1_G Check the Absolute Configuration of C10' = ... S PLAT793_ALERT_1_G Check the Absolute Configuration of C10B = ... S
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 9 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For general background, see: Phillipson & Zenk (1980); Saxton (1983); Abraham (1975). For related structures, see: Hökelek et al. (1994); Patır et al. (1997); Hökelek et al. (1998); Hökelek et al. (1999); Hökelek & Patir (1999); Hökelek & Patır (2002); Hökelek et al. (2004); Hökelek et al. (2006). For bond length data, see: Allen et al. (1987).
For related literature, see: Hökelek & Patir (1999).
For the preparation of the title compound, (I), a solution of 2,3-dichloro -5,6-dicyano-p-benzoquine (4.25 g, 18.75 mmol) in tetrahydrofuran (30 ml) was added dropwise to an ice cold solution of (3aS,10bR)-3,3a,4,5,10,10b -hexahydro-2H-furo[2,3-a]carbazole (2.00 g, 9.37 mmol) in tetrahydrofuran -water (90:10, 50 ml). The mixture was stirred in an ice bath for 4 h, and then over night. The mixture was poured into sodium hydroxide (100 ml, 10%) and extracted with dichloromethane (25 ml). The organic layer was dried over anhydrous magnesium sulfate, and the solvent was evaporated under reduced pressure. The residue was crystallized from ethyl acetate (yield; 1.56 g, 73%).
H atoms were located in difference syntheses and refined isotropically [N—H = 0.83 (4) and 0.96 (5) Å, Uiso(H) = 0.088 (17) and 0.062 (16) Å2; C—H = 0.88 (4)–1.10 (6) Å, Uiso(H) = 0.038 (12)–0.16 (3) Å2].
Tetrahydrocarbazole systems are present in the framework of a number of indole-type alkaloids of biological interest (Phillipson & Zenk, 1980; Saxton, 1983; Abraham, 1975). The structures of tricyclic, tetracyclic and pentacyclic ring systems with dithiolane and other substituents of the tetrahydrocarbazole core, have been the subject of much interest in our laboratory. These include 1,2,3,4-tetrahydrocarbazole-1-spiro-2'-[1,3]dithiolane, (II) (Hökelek et al., 1994), N-(2-methoxyethyl)-N-{2,3,4,9-tetrahydrospiro[1H-carbazole-1, 2-(1,3)dithiolane]-4-yl}benzene-sulfonamide, (III) (Patır et al., 1997), spiro[carbazole-1(2H),2'-[1,3]-dithiolan]-4(3H)-one, (IV) (Hökelek et al., 1998), 9-acetonyl-3-ethylidene-1,2,3,4-tetrahydrospiro[carbazole-1,2'-[1,3] dithiolan]-4-one, (V) (Hökelek et al., 1999), N-(2,2-dimethoxyethyl)-N -{9-methoxymethyl-1,2,3,4-tetrahydrospiro[carbazole-1,2'-[1,3]dithiolan] -4-yl}benzamide, (VI) (Hökelek & Patir, 1999); also the pentacyclic compounds 6-ethyl-4-(2-methoxyethyl)-2,6-methano-5-oxo-hexahydropyrrolo- (2,3 - d)carbazole-1-spiro-2'-(1,3)dithiolane, (VII) (Hökelek & Patır, 2002), N-(2-benzyloxyethyl)-4,7-dimethyl-6-(1,3-dithiolan-2-yl)-1,2,3,4, 5,6-hexahydro-1,5-methano-2-azocino[4,3-b]indol-2-one, (VIII) (Hökelek et al., 2004) and 4-ethyl-6,6-ethylenedithio-2-(2-methoxyethyl)-7-methoxy- methylene-2,3,4,5,6,7-hexahydro-1,5-methano-1H-azocino[4,3-b]indol-3-one, (IX) (Hökelek et al., 2006). The title compound, (I), may be considered as a synthetic precursor of tetracyclic indole alkaloids of biological interests. The present study was undertaken to ascertain its crystal structure.
The asymmetric unit of the title compound, (I), contains two independent molecules (Fig. 1). It consists of a carbazole skeleton with furan ring, in which the bond lengths and angles are within normal ranges (Allen et al., 1987). The bonds N10—C9A [1.388 (5) Å], N10—C10A [1.357 (5) Å], N10'-C9A' [1.378 (5) Å] and N10'-C10 [1.362 (5) Å] generally agree with those in compounds (II)-(IX). In all structures atom N10 is substituted. The absolute configurations of C3a and C10b are R and R, respectively.
An examination of the deviations from the least-squares planes through individual rings shows that rings A (C5b/C6—C9/C9a), B (C5a/C5b/C9a/N10/C10a) and A' (C5b'/C6'-C9'/C9a'), B' (C5a'/C5b'/C9a'/N10'/C10) are planar. They are also nearly coplanar with dihedral angles of A/B = 0.48 (17)° and A'/B' = 1.26 (17)°. Rings C (C3a/C4/C5/C5a/C10a/C10b), D (O1/C2/C3/C3a/C10b) and C' (C3a'/C4'/C5'/C5a'/C10/C10'), D' (O1'/C2'/C3'/C3a'/C10') have envelope conformations with atoms C3a and C3a' displaced by -0.472 (5) Å (for ring C), 0.533 (5) Å (for ring D) and -0.491 (5) Å (for ring C'), -0.551 (5) Å (for ring D') from the planes of the other ring atoms, respectively. Rings C and C' have pseudo mirror planes running through atoms C3a and C5a (for ring C) and C3a' and C5a' (for ring C'), while rings D and D' have pseudo twofold axis and pseudo mirror plane, respectively, running through atom C2 and midpoint of C3a—C10b bond (for ring D) and atom C3a' and midpoint of O1'-C2'bond (for ring D'), as can be deduced from the torsion angles (Table 1).
In the crystal structure, intermolecular N—H···O hydrogen bonds (Table 2) link the molecules into chains nearly parallel to c axis (Fig. 2), in which they may be effective in the stabilization of the structure.
For general background, see: Phillipson & Zenk (1980); Saxton (1983); Abraham (1975). For related structures, see: Hökelek et al. (1994); Patır et al. (1997); Hökelek et al. (1998); Hökelek et al. (1999); Hökelek & Patir (1999); Hökelek & Patır (2002); Hökelek et al. (2004); Hökelek et al. (2006). For bond length data, see: Allen et al. (1987).
For related literature, see: Hökelek & Patir (1999).
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
C14H13NO2 | Z = 4 |
Mr = 227.26 | F(000) = 480 |
Triclinic, P1 | Dx = 1.349 Mg m−3 |
Hall symbol: -P 1 | Melting point: 484 K |
a = 9.5970 (2) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.0316 (3) Å | Cell parameters from 25 reflections |
c = 12.4952 (3) Å | θ = 3.5–15.8° |
α = 98.498 (15)° | µ = 0.09 mm−1 |
β = 107.499 (18)° | T = 298 K |
γ = 96.362 (19)° | Block, colorless |
V = 1119.21 (16) Å3 | 0.25 × 0.20 × 0.15 mm |
Enraf–Nonius TurboCAD-4 diffractometer | 1657 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.032 |
Graphite monochromator | θmax = 25.1°, θmin = 3.2° |
non–profiled ω scans | h = −11→10 |
Absorption correction: ψ scan (North et al., 1968) | k = −11→11 |
Tmin = 0.961, Tmax = 0.985 | l = 0→14 |
4127 measured reflections | 3 standard reflections every 120 min |
3933 independent reflections | intensity decay: 1% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.059 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.96 | w = 1/[σ2(Fo2) + (0.0695P)2] where P = (Fo2 + 2Fc2)/3 |
3933 reflections | (Δ/σ)max < 0.001 |
411 parameters | Δρmax = 0.21 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C14H13NO2 | γ = 96.362 (19)° |
Mr = 227.26 | V = 1119.21 (16) Å3 |
Triclinic, P1 | Z = 4 |
a = 9.5970 (2) Å | Mo Kα radiation |
b = 10.0316 (3) Å | µ = 0.09 mm−1 |
c = 12.4952 (3) Å | T = 298 K |
α = 98.498 (15)° | 0.25 × 0.20 × 0.15 mm |
β = 107.499 (18)° |
Enraf–Nonius TurboCAD-4 diffractometer | 1657 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.032 |
Tmin = 0.961, Tmax = 0.985 | 3 standard reflections every 120 min |
4127 measured reflections | intensity decay: 1% |
3933 independent reflections |
R[F2 > 2σ(F2)] = 0.059 | 0 restraints |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.96 | Δρmax = 0.21 e Å−3 |
3933 reflections | Δρmin = −0.22 e Å−3 |
411 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.3614 (4) | 0.0625 (3) | 0.8096 (2) | 0.0575 (9) | |
O2 | 0.4088 (4) | 0.4281 (4) | 1.1854 (3) | 0.0780 (11) | |
N10 | 0.6324 (4) | 0.2534 (4) | 0.9325 (3) | 0.0453 (10) | |
H10 | 0.654 (5) | 0.195 (5) | 0.874 (4) | 0.088 (17)* | |
C2 | 0.3106 (7) | −0.0309 (5) | 0.8735 (5) | 0.0624 (15) | |
H21 | 0.392 (6) | −0.087 (5) | 0.903 (4) | 0.097 (19)* | |
H22 | 0.245 (7) | −0.121 (6) | 0.816 (5) | 0.13 (2)* | |
C3 | 0.2490 (8) | 0.0502 (6) | 0.9539 (5) | 0.0661 (16) | |
H31 | 0.325 (7) | 0.061 (6) | 1.033 (6) | 0.13 (3)* | |
H32 | 0.150 (5) | 0.010 (5) | 0.952 (4) | 0.077 (17)* | |
C3A | 0.2338 (6) | 0.1863 (5) | 0.9132 (4) | 0.0535 (13) | |
H3A | 0.131 (5) | 0.171 (4) | 0.849 (4) | 0.062 (14)* | |
C4 | 0.2435 (6) | 0.3072 (6) | 1.0061 (4) | 0.0557 (14) | |
H41 | 0.213 (6) | 0.398 (6) | 0.971 (4) | 0.108 (19)* | |
H42 | 0.178 (5) | 0.286 (5) | 1.042 (4) | 0.065 (15)* | |
C5 | 0.3954 (5) | 0.3658 (5) | 1.0900 (4) | 0.0483 (12) | |
C5A | 0.5185 (5) | 0.3427 (4) | 1.0513 (3) | 0.0393 (11) | |
C5B | 0.6747 (5) | 0.3850 (4) | 1.1055 (4) | 0.0424 (11) | |
C6 | 0.7658 (6) | 0.4656 (5) | 1.2100 (4) | 0.0508 (13) | |
H6 | 0.720 (4) | 0.503 (4) | 1.259 (3) | 0.038 (12)* | |
C7 | 0.9151 (7) | 0.4841 (6) | 1.2311 (5) | 0.0622 (15) | |
H7 | 0.973 (5) | 0.542 (4) | 1.295 (4) | 0.053 (14)* | |
C8 | 0.9794 (7) | 0.4263 (5) | 1.1547 (5) | 0.0628 (15) | |
H8 | 1.086 (6) | 0.443 (5) | 1.167 (4) | 0.093 (19)* | |
C9 | 0.8942 (5) | 0.3469 (5) | 1.0509 (4) | 0.0524 (13) | |
H9 | 0.940 (5) | 0.302 (5) | 0.997 (4) | 0.087 (17)* | |
C9A | 0.7427 (5) | 0.3281 (4) | 1.0291 (3) | 0.0409 (11) | |
C10A | 0.4989 (5) | 0.2641 (4) | 0.9463 (3) | 0.0383 (11) | |
C10B | 0.3547 (5) | 0.1990 (5) | 0.8586 (4) | 0.0441 (12) | |
H10B | 0.328 (6) | 0.255 (5) | 0.803 (4) | 0.096 (19)* | |
O1' | 0.8017 (4) | 0.7748 (3) | 1.4224 (2) | 0.0590 (9) | |
O2' | 0.7739 (4) | 1.0773 (4) | 1.8104 (3) | 0.0793 (12) | |
N10' | 0.6708 (4) | 1.0219 (4) | 1.4240 (3) | 0.0455 (10) | |
H10' | 0.666 (5) | 0.988 (4) | 1.358 (4) | 0.062 (16)* | |
C2' | 0.9560 (7) | 0.7825 (9) | 1.4831 (5) | 0.0769 (19) | |
H21' | 1.001 (8) | 0.847 (7) | 1.452 (6) | 0.16 (3)* | |
H22' | 0.973 (6) | 0.681 (6) | 1.467 (5) | 0.11 (2)* | |
C3' | 0.9758 (6) | 0.8239 (6) | 1.6083 (4) | 0.0574 (14) | |
H31' | 1.015 (5) | 0.926 (5) | 1.631 (4) | 0.087 (18)* | |
H32' | 1.053 (5) | 0.771 (4) | 1.655 (4) | 0.063 (14)* | |
C3A' | 0.8212 (5) | 0.7840 (5) | 1.6150 (4) | 0.0477 (12) | |
H3A' | 0.807 (5) | 0.682 (5) | 1.615 (4) | 0.076 (15)* | |
C4' | 0.7920 (8) | 0.8567 (6) | 1.7204 (5) | 0.0607 (15) | |
H41' | 0.705 (6) | 0.813 (5) | 1.717 (4) | 0.08 (2)* | |
H42' | 0.873 (6) | 0.848 (5) | 1.793 (5) | 0.090 (18)* | |
C5' | 0.7615 (5) | 1.0012 (5) | 1.7200 (4) | 0.0521 (13) | |
C5A' | 0.7197 (4) | 1.0437 (4) | 1.6119 (3) | 0.0399 (11) | |
C5B' | 0.6913 (4) | 1.1738 (4) | 1.5828 (3) | 0.0410 (11) | |
C6' | 0.6891 (5) | 1.3000 (5) | 1.6424 (4) | 0.0468 (12) | |
H6' | 0.707 (4) | 1.323 (4) | 1.717 (4) | 0.052 (14)* | |
C7' | 0.6594 (5) | 1.4060 (5) | 1.5852 (4) | 0.0524 (13) | |
H7' | 0.651 (4) | 1.498 (4) | 1.619 (3) | 0.048 (12)* | |
C8' | 0.6326 (6) | 1.3864 (5) | 1.4668 (5) | 0.0591 (14) | |
H8' | 0.608 (4) | 1.467 (4) | 1.423 (3) | 0.060 (13)* | |
C9' | 0.6346 (5) | 1.2632 (5) | 1.4058 (4) | 0.0520 (13) | |
H9' | 0.615 (4) | 1.246 (4) | 1.329 (3) | 0.042 (12)* | |
C9A' | 0.6622 (4) | 1.1557 (4) | 1.4631 (3) | 0.0401 (11) | |
C10 | 0.7070 (4) | 0.9548 (4) | 1.5132 (4) | 0.0409 (11) | |
C10' | 0.7247 (5) | 0.8092 (5) | 1.5011 (4) | 0.0452 (12) | |
H10A | 0.624 (5) | 0.758 (4) | 1.476 (3) | 0.052 (13)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.079 (2) | 0.050 (2) | 0.0440 (19) | 0.0092 (17) | 0.0228 (17) | 0.0041 (16) |
O2 | 0.081 (3) | 0.104 (3) | 0.051 (2) | 0.019 (2) | 0.037 (2) | −0.014 (2) |
N10 | 0.055 (3) | 0.046 (2) | 0.040 (2) | 0.012 (2) | 0.024 (2) | 0.0056 (19) |
C2 | 0.082 (4) | 0.047 (3) | 0.057 (3) | 0.005 (3) | 0.017 (3) | 0.019 (3) |
C3 | 0.072 (4) | 0.063 (4) | 0.069 (4) | 0.001 (3) | 0.032 (4) | 0.020 (3) |
C3A | 0.052 (3) | 0.061 (3) | 0.050 (3) | 0.011 (3) | 0.017 (3) | 0.017 (3) |
C4 | 0.058 (4) | 0.068 (4) | 0.054 (3) | 0.019 (3) | 0.031 (3) | 0.020 (3) |
C5 | 0.061 (4) | 0.054 (3) | 0.042 (3) | 0.023 (3) | 0.027 (3) | 0.013 (2) |
C5A | 0.054 (3) | 0.038 (3) | 0.033 (2) | 0.014 (2) | 0.023 (2) | 0.007 (2) |
C5B | 0.055 (3) | 0.040 (3) | 0.040 (3) | 0.016 (2) | 0.024 (2) | 0.010 (2) |
C6 | 0.065 (4) | 0.054 (3) | 0.041 (3) | 0.013 (3) | 0.026 (3) | 0.008 (2) |
C7 | 0.066 (4) | 0.064 (4) | 0.046 (3) | 0.008 (3) | 0.011 (3) | −0.006 (3) |
C8 | 0.055 (4) | 0.067 (4) | 0.066 (4) | 0.013 (3) | 0.020 (3) | 0.006 (3) |
C9 | 0.053 (4) | 0.056 (3) | 0.054 (3) | 0.018 (3) | 0.024 (3) | 0.006 (3) |
C9A | 0.048 (3) | 0.040 (3) | 0.038 (3) | 0.009 (2) | 0.020 (2) | 0.005 (2) |
C10A | 0.047 (3) | 0.040 (3) | 0.036 (3) | 0.011 (2) | 0.020 (2) | 0.013 (2) |
C10B | 0.060 (3) | 0.036 (3) | 0.039 (3) | 0.010 (2) | 0.019 (3) | 0.008 (2) |
O1' | 0.070 (3) | 0.065 (2) | 0.0415 (19) | 0.0224 (18) | 0.0193 (18) | −0.0018 (16) |
O2' | 0.134 (3) | 0.083 (3) | 0.045 (2) | 0.050 (2) | 0.049 (2) | 0.0171 (19) |
N10' | 0.054 (3) | 0.048 (3) | 0.034 (2) | 0.0126 (19) | 0.016 (2) | 0.004 (2) |
C2' | 0.067 (5) | 0.110 (6) | 0.055 (4) | 0.028 (4) | 0.024 (3) | 0.004 (4) |
C3' | 0.052 (4) | 0.059 (4) | 0.060 (3) | 0.017 (3) | 0.017 (3) | 0.003 (3) |
C3A' | 0.064 (4) | 0.039 (3) | 0.045 (3) | 0.011 (2) | 0.022 (2) | 0.011 (2) |
C4' | 0.087 (5) | 0.061 (4) | 0.049 (3) | 0.024 (4) | 0.035 (3) | 0.022 (3) |
C5' | 0.067 (3) | 0.054 (3) | 0.049 (3) | 0.019 (3) | 0.034 (3) | 0.016 (3) |
C5A' | 0.049 (3) | 0.038 (3) | 0.035 (3) | 0.005 (2) | 0.019 (2) | 0.003 (2) |
C5B' | 0.041 (3) | 0.045 (3) | 0.038 (3) | 0.006 (2) | 0.016 (2) | 0.003 (2) |
C6' | 0.055 (3) | 0.043 (3) | 0.046 (3) | 0.008 (2) | 0.024 (3) | 0.003 (3) |
C7' | 0.058 (3) | 0.036 (3) | 0.068 (4) | 0.007 (2) | 0.028 (3) | 0.007 (3) |
C8' | 0.068 (4) | 0.054 (4) | 0.069 (4) | 0.019 (3) | 0.035 (3) | 0.020 (3) |
C9' | 0.059 (3) | 0.062 (4) | 0.042 (3) | 0.017 (3) | 0.021 (3) | 0.016 (3) |
C9A' | 0.044 (3) | 0.045 (3) | 0.036 (3) | 0.012 (2) | 0.018 (2) | 0.008 (2) |
C10 | 0.037 (3) | 0.044 (3) | 0.043 (3) | 0.006 (2) | 0.015 (2) | 0.007 (2) |
C10' | 0.045 (3) | 0.046 (3) | 0.046 (3) | 0.006 (3) | 0.022 (3) | 0.001 (2) |
O1—C2 | 1.451 (5) | O1'—C2' | 1.434 (6) |
O1—C10B | 1.432 (5) | O1'—C10' | 1.424 (5) |
O2—C5 | 1.225 (5) | O2'—C5' | 1.232 (5) |
N10—C9A | 1.388 (5) | N10'—C9A' | 1.378 (5) |
N10—C10A | 1.357 (5) | N10'—C10 | 1.362 (5) |
N10—H10 | 0.96 (5) | N10'—H10' | 0.83 (4) |
C2—H21 | 1.03 (5) | C2'—H21' | 0.93 (7) |
C2—H22 | 1.07 (6) | C2'—H22' | 1.05 (6) |
C3—C2 | 1.498 (7) | C3'—C2' | 1.507 (7) |
C3—H31 | 1.02 (6) | C3'—H31' | 1.02 (5) |
C3—H32 | 0.98 (5) | C3'—H32' | 1.04 (4) |
C3A—C3 | 1.532 (7) | C3A'—C3' | 1.524 (6) |
C3A—H3A | 1.05 (4) | C3A'—C4' | 1.526 (6) |
C3A—C4 | 1.524 (7) | C3A'—C10' | 1.520 (6) |
C4—H41 | 1.10 (6) | C3A'—H3A' | 1.02 (5) |
C4—H42 | 0.90 (4) | C4'—H41' | 0.88 (5) |
C5—C4 | 1.510 (7) | C4'—H42' | 1.03 (5) |
C5A—C5 | 1.433 (5) | C5'—C4' | 1.510 (7) |
C5A—C5B | 1.432 (6) | C5A'—C5' | 1.432 (6) |
C5A—C10A | 1.375 (5) | C5A'—C10 | 1.375 (5) |
C5B—C6 | 1.403 (6) | C5B'—C5A' | 1.439 (6) |
C6—C7 | 1.362 (7) | C5B'—C6' | 1.376 (6) |
C6—H6 | 0.91 (4) | C5B'—C9A' | 1.416 (5) |
C7—C8 | 1.378 (7) | C6'—H6' | 0.88 (4) |
C7—H7 | 0.90 (4) | C7'—C6' | 1.376 (6) |
C8—H8 | 0.98 (5) | C7'—C8' | 1.403 (6) |
C9—C8 | 1.377 (6) | C7'—H7' | 0.98 (4) |
C9—H9 | 0.99 (5) | C8'—H8' | 1.05 (4) |
C9A—C5B | 1.399 (5) | C9A'—C9' | 1.387 (6) |
C9A—C9 | 1.382 (6) | C9'—C8' | 1.358 (6) |
C10A—C10B | 1.490 (6) | C9'—H9' | 0.90 (4) |
C10B—C3A | 1.515 (6) | C10—C10' | 1.481 (6) |
C10B—H10B | 0.95 (5) | C10'—H10A | 0.98 (4) |
C10B—O1—C2 | 108.7 (3) | C9A'—N10'—H10' | 126 (3) |
C10A—N10—C9A | 108.6 (3) | O1'—C2'—C3' | 106.8 (4) |
C10A—N10—H10 | 129 (3) | O1'—C2'—H22' | 103 (3) |
C9A—N10—H10 | 122 (3) | C3'—C2'—H22' | 109 (3) |
O1—C2—C3 | 107.2 (4) | O1'—C2'—H21' | 103 (5) |
O1—C2—H21 | 109 (3) | C3'—C2'—H21' | 115 (5) |
C3—C2—H21 | 121 (3) | H22'—C2'—H21' | 118 (6) |
O1—C2—H22 | 109 (3) | C2'—C3'—C3A' | 103.6 (5) |
C3—C2—H22 | 120 (3) | C2'—C3'—H32' | 110 (2) |
H21—C2—H22 | 89 (4) | C3A'—C3'—H32' | 112 (2) |
C2—C3—C3A | 105.1 (4) | C2'—C3'—H31' | 108 (3) |
C2—C3—H32 | 115 (3) | C3A'—C3'—H31' | 114 (3) |
C3A—C3—H32 | 107 (3) | H32'—C3'—H31' | 110 (4) |
C2—C3—H31 | 106 (4) | C10'—C3A'—C3' | 101.4 (4) |
C3A—C3—H31 | 113 (4) | C10'—C3A'—C4' | 115.4 (4) |
H32—C3—H31 | 111 (4) | C3'—C3A'—C4' | 115.6 (5) |
C10B—C3A—C4 | 114.9 (4) | C10'—C3A'—H3A' | 109 (3) |
C10B—C3A—C3 | 101.8 (4) | C3'—C3A'—H3A' | 107 (3) |
C4—C3A—C3 | 114.8 (4) | C4'—C3A'—H3A' | 108 (3) |
C10B—C3A—H3A | 109 (2) | C5'—C4'—C3A' | 116.7 (4) |
C4—C3A—H3A | 110 (2) | C5'—C4'—H42' | 113 (3) |
C3—C3A—H3A | 106 (2) | C3A'—C4'—H42' | 110 (3) |
C5—C4—C3A | 116.7 (4) | C5'—C4'—H41' | 102 (4) |
C5—C4—H42 | 112 (3) | C3A'—C4'—H41' | 104 (3) |
C3A—C4—H42 | 109 (3) | H42'—C4'—H41' | 111 (4) |
C5—C4—H41 | 100 (3) | O2'—C5'—C5A' | 122.7 (4) |
C3A—C4—H41 | 113 (3) | O2'—C5'—C4' | 120.0 (4) |
H42—C4—H41 | 106 (4) | C5A'—C5'—C4' | 117.2 (4) |
O2—C5—C5A | 123.5 (4) | C10—C5A'—C5' | 120.6 (4) |
O2—C5—C4 | 120.2 (4) | C10—C5A'—C5B' | 108.1 (4) |
C5A—C5—C4 | 116.3 (4) | C5'—C5A'—C5B' | 131.2 (4) |
C10A—C5A—C5B | 106.9 (3) | C6'—C5B'—C9A' | 119.1 (4) |
C10A—C5A—C5 | 121.5 (4) | C6'—C5B'—C5A' | 135.4 (4) |
C5B—C5A—C5 | 131.5 (4) | C9A'—C5B'—C5A' | 105.4 (3) |
C9A—C5B—C6 | 118.0 (4) | C5B'—C6'—C7' | 119.7 (5) |
C9A—C5B—C5A | 106.5 (4) | C5B'—C6'—H6' | 127 (3) |
C6—C5B—C5A | 135.5 (4) | C7'—C6'—H6' | 114 (3) |
C7—C6—C5B | 118.1 (5) | C6'—C7'—C8' | 120.4 (5) |
C7—C6—H6 | 125 (2) | C6'—C7'—H7' | 126 (2) |
C5B—C6—H6 | 117 (2) | C8'—C7'—H7' | 113 (2) |
C6—C7—C8 | 122.8 (5) | C9—C8—C7 | 121.1 (5) |
C6—C7—H7 | 118 (3) | C9—C8—H8 | 115 (3) |
C8—C7—H7 | 119 (3) | C7—C8—H8 | 124 (3) |
C8—C9—C9A | 116.4 (5) | C9'—C8'—C7' | 121.2 (5) |
C8—C9—H9 | 121 (3) | C9'—C8'—H8' | 119 (2) |
C9A—C9—H9 | 122 (3) | C7'—C8'—H8' | 120 (2) |
C9—C9A—N10 | 128.2 (4) | C8'—C9'—C9A' | 118.5 (5) |
C9—C9A—C5B | 123.7 (4) | C8'—C9'—H9' | 124 (2) |
N10—C9A—C5B | 108.1 (4) | C9A'—C9'—H9' | 117 (2) |
N10—C10A—C5A | 109.9 (4) | N10'—C9A'—C9' | 131.0 (4) |
N10—C10A—C10B | 123.7 (4) | N10'—C9A'—C5B' | 107.8 (4) |
C5A—C10A—C10B | 126.4 (4) | C9'—C9A'—C5B' | 121.1 (4) |
O1—C10B—C10A | 110.8 (4) | N10'—C10—C5A' | 108.6 (4) |
O1—C10B—C3A | 105.8 (4) | N10'—C10—C10' | 124.0 (4) |
C10A—C10B—C3A | 110.3 (4) | C5A'—C10—C10' | 127.4 (4) |
O1—C10B—H10B | 113 (3) | O1'—C10'—C10 | 111.3 (4) |
C10A—C10B—H10B | 109 (3) | O1'—C10'—C3A' | 105.5 (4) |
C3A—C10B—H10B | 107 (3) | C10—C10'—C3A' | 109.1 (4) |
C10'—O1'—C2' | 109.8 (4) | O1'—C10'—H10A | 112 (2) |
C10—N10'—C9A' | 110.0 (4) | C10—C10'—H10A | 105 (2) |
C10—N10'—H10' | 123 (3) | C3A'—C10'—H10A | 113 (2) |
C10B—O1—C2—C3 | 8.7 (6) | C10'—O1'—C2'—C3' | 0.3 (7) |
C2—O1—C10B—C10A | 92.5 (4) | C2'—O1'—C10'—C10 | 96.0 (5) |
C2—O1—C10B—C3A | −27.2 (5) | C2'—O1'—C10'—C3A' | −22.3 (6) |
C10A—N10—C9A—C9 | −179.1 (4) | C10—N10'—C9A'—C9' | 177.3 (4) |
C10A—N10—C9A—C5B | 0.9 (5) | C10—N10'—C9A'—C5B' | −1.3 (5) |
C9A—N10—C10A—C5A | −1.0 (5) | C3A'—C3'—C2'—O1' | 21.5 (7) |
C9A—N10—C10A—C10B | 178.8 (4) | C10'—C3A'—C4'—C5' | −39.9 (8) |
C3A—C3—C2—O1 | 12.9 (7) | C3'—C3A'—C4'—C5' | 78.2 (7) |
C4—C3A—C3—C2 | −152.8 (5) | C10'—C3A'—C3'—C2' | −33.5 (6) |
C10B—C3A—C3—C2 | −28.0 (6) | C4'—C3A'—C3'—C2' | −159.1 (5) |
C10B—C3A—C4—C5 | −42.7 (6) | C3'—C3A'—C10'—O1' | 34.5 (4) |
C3—C3A—C4—C5 | 74.9 (6) | C4'—C3A'—C10'—O1' | 160.1 (4) |
O2—C5—C4—C3A | −155.4 (4) | C3'—C3A'—C10'—C10 | −85.3 (4) |
C5A—C5—C4—C3A | 24.1 (6) | C4'—C3A'—C10'—C10 | 40.4 (6) |
C10A—C5A—C5—O2 | 175.4 (4) | O2'—C5'—C4'—C3A' | −161.7 (5) |
C5B—C5A—C5—O2 | −2.1 (7) | C5A'—C5'—C4'—C3A' | 17.8 (8) |
C10A—C5A—C5—C4 | −4.1 (6) | C10—C5A'—C5'—O2' | −179.9 (5) |
C5B—C5A—C5—C4 | 178.4 (4) | C5B'—C5A'—C5'—O2' | 3.3 (8) |
C10A—C5A—C5B—C9A | −0.2 (4) | C10—C5A'—C5'—C4' | 0.6 (7) |
C5—C5A—C5B—C9A | 177.6 (4) | C5B'—C5A'—C5'—C4' | −176.2 (5) |
C10A—C5A—C5B—C6 | 179.2 (5) | C5'—C5A'—C10—N10' | −178.1 (4) |
C5—C5A—C5B—C6 | −3.0 (8) | C5B'—C5A'—C10—N10' | −0.6 (5) |
C5B—C5A—C10A—N10 | 0.7 (4) | C5'—C5A'—C10—C10' | 3.5 (7) |
C5—C5A—C10A—N10 | −177.3 (4) | C5B'—C5A'—C10—C10' | −179.1 (4) |
C5B—C5A—C10A—C10B | −179.1 (4) | C6'—C5B'—C5A'—C10 | −179.1 (5) |
C5—C5A—C10A—C10B | 2.8 (6) | C9A'—C5B'—C5A'—C10 | −0.2 (5) |
C9A—C5B—C6—C7 | 0.1 (6) | C6'—C5B'—C5A'—C5' | −2.0 (8) |
C5A—C5B—C6—C7 | −179.3 (5) | C9A'—C5B'—C5A'—C5' | 176.9 (4) |
C5B—C6—C7—C8 | −0.5 (8) | C9A'—C5B'—C6'—C7' | −0.2 (7) |
C6—C7—C8—C9 | 0.7 (8) | C5A'—C5B'—C6'—C7' | 178.6 (4) |
C9A—C9—C8—C7 | −0.5 (7) | C6'—C5B'—C9A'—N10' | −180.0 (4) |
C9—C9A—C5B—C6 | 0.1 (6) | C5A'—C5B'—C9A'—N10' | 0.9 (4) |
N10—C9A—C5B—C6 | −179.9 (4) | C6'—C5B'—C9A'—C9' | 1.3 (6) |
C9—C9A—C5B—C5A | 179.6 (4) | C5A'—C5B'—C9A'—C9' | −177.9 (4) |
N10—C9A—C5B—C5A | −0.4 (4) | C8'—C7'—C6'—C5B' | −0.5 (7) |
N10—C9A—C9—C8 | −179.9 (4) | C6'—C7'—C8'—C9' | 0.3 (7) |
C5B—C9A—C9—C8 | 0.2 (7) | C9A'—C9'—C8'—C7' | 0.7 (7) |
N10—C10A—C10B—O1 | 42.9 (6) | N10'—C9A'—C9'—C8' | −180.0 (4) |
C5A—C10A—C10B—O1 | −137.3 (4) | C5B'—C9A'—C9'—C8' | −1.5 (7) |
N10—C10A—C10B—C3A | 159.8 (4) | N10'—C10—C10'—O1' | 41.6 (6) |
C5A—C10A—C10B—C3A | −20.4 (6) | C5A'—C10—C10'—O1' | −140.2 (4) |
O1—C10B—C3A—C4 | 158.5 (4) | N10'—C10—C10'—C3A' | 157.7 (4) |
C10A—C10B—C3A—C4 | 38.6 (6) | C5A'—C10—C10'—C3A' | −24.1 (6) |
O1—C10B—C3A—C3 | 33.8 (5) | C9A'—N10'—C10—C5A' | 1.2 (5) |
C10A—C10B—C3A—C3 | −86.1 (5) | C9A'—N10'—C10—C10' | 179.7 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N10—H10···O2i | 0.96 (5) | 1.98 (6) | 2.876 (6) | 155 (4) |
N10′—H10′···O1ii | 0.83 (5) | 2.01 (5) | 2.829 (5) | 169 (4) |
Symmetry codes: (i) x, y−1, z−1; (ii) −x+1, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C14H13NO2 |
Mr | 227.26 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 9.5970 (2), 10.0316 (3), 12.4952 (3) |
α, β, γ (°) | 98.498 (15), 107.499 (18), 96.362 (19) |
V (Å3) | 1119.21 (16) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.25 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Enraf–Nonius TurboCAD-4 |
Absorption correction | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.961, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4127, 3933, 1657 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.059, 0.169, 0.96 |
No. of reflections | 3933 |
No. of parameters | 411 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.21, −0.22 |
Computer programs: CAD-4 EXPRESS (Enraf–Nonius, 1994), CAD-4 EXPRESS, XCAD4 (Harms & Wocadlo, 1995), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
C10B—O1—C2—C3 | 8.7 (6) | C10'—O1'—C2'—C3' | 0.3 (7) |
C2—O1—C10B—C3A | −27.2 (5) | C2'—O1'—C10'—C3A' | −22.3 (6) |
C3A—C3—C2—O1 | 12.9 (7) | C3A'—C3'—C2'—O1' | 21.5 (7) |
C10B—C3A—C3—C2 | −28.0 (6) | C10'—C3A'—C4'—C5' | −39.9 (8) |
C10B—C3A—C4—C5 | −42.7 (6) | C10'—C3A'—C3'—C2' | −33.5 (6) |
C5A—C5—C4—C3A | 24.1 (6) | C3'—C3A'—C10'—O1' | 34.5 (4) |
C10A—C5A—C5—C4 | −4.1 (6) | C4'—C3A'—C10'—C10 | 40.4 (6) |
C5—C5A—C10A—C10B | 2.8 (6) | C5A'—C5'—C4'—C3A' | 17.8 (8) |
C5A—C10A—C10B—C3A | −20.4 (6) | C10—C5A'—C5'—C4' | 0.6 (7) |
C10A—C10B—C3A—C4 | 38.6 (6) | C5'—C5A'—C10—N10' | −178.1 (4) |
O1—C10B—C3A—C3 | 33.8 (5) | C5A'—C10—C10'—C3A' | −24.1 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
N10—H10···O2i | 0.96 (5) | 1.98 (6) | 2.876 (6) | 155 (4) |
N10'—H10'···O1ii | 0.83 (5) | 2.01 (5) | 2.829 (5) | 169 (4) |
Symmetry codes: (i) x, y−1, z−1; (ii) −x+1, −y+1, −z+2. |
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Tetrahydrocarbazole systems are present in the framework of a number of indole-type alkaloids of biological interest (Phillipson & Zenk, 1980; Saxton, 1983; Abraham, 1975). The structures of tricyclic, tetracyclic and pentacyclic ring systems with dithiolane and other substituents of the tetrahydrocarbazole core, have been the subject of much interest in our laboratory. These include 1,2,3,4-tetrahydrocarbazole-1-spiro-2'-[1,3]dithiolane, (II) (Hökelek et al., 1994), N-(2-methoxyethyl)-N-{2,3,4,9-tetrahydrospiro[1H-carbazole-1, 2-(1,3)dithiolane]-4-yl}benzene-sulfonamide, (III) (Patır et al., 1997), spiro[carbazole-1(2H),2'-[1,3]-dithiolan]-4(3H)-one, (IV) (Hökelek et al., 1998), 9-acetonyl-3-ethylidene-1,2,3,4-tetrahydrospiro[carbazole-1,2'-[1,3] dithiolan]-4-one, (V) (Hökelek et al., 1999), N-(2,2-dimethoxyethyl)-N -{9-methoxymethyl-1,2,3,4-tetrahydrospiro[carbazole-1,2'-[1,3]dithiolan] -4-yl}benzamide, (VI) (Hökelek & Patir, 1999); also the pentacyclic compounds 6-ethyl-4-(2-methoxyethyl)-2,6-methano-5-oxo-hexahydropyrrolo- (2,3 - d)carbazole-1-spiro-2'-(1,3)dithiolane, (VII) (Hökelek & Patır, 2002), N-(2-benzyloxyethyl)-4,7-dimethyl-6-(1,3-dithiolan-2-yl)-1,2,3,4, 5,6-hexahydro-1,5-methano-2-azocino[4,3-b]indol-2-one, (VIII) (Hökelek et al., 2004) and 4-ethyl-6,6-ethylenedithio-2-(2-methoxyethyl)-7-methoxy- methylene-2,3,4,5,6,7-hexahydro-1,5-methano-1H-azocino[4,3-b]indol-3-one, (IX) (Hökelek et al., 2006). The title compound, (I), may be considered as a synthetic precursor of tetracyclic indole alkaloids of biological interests. The present study was undertaken to ascertain its crystal structure.
The asymmetric unit of the title compound, (I), contains two independent molecules (Fig. 1). It consists of a carbazole skeleton with furan ring, in which the bond lengths and angles are within normal ranges (Allen et al., 1987). The bonds N10—C9A [1.388 (5) Å], N10—C10A [1.357 (5) Å], N10'-C9A' [1.378 (5) Å] and N10'-C10 [1.362 (5) Å] generally agree with those in compounds (II)-(IX). In all structures atom N10 is substituted. The absolute configurations of C3a and C10b are R and R, respectively.
An examination of the deviations from the least-squares planes through individual rings shows that rings A (C5b/C6—C9/C9a), B (C5a/C5b/C9a/N10/C10a) and A' (C5b'/C6'-C9'/C9a'), B' (C5a'/C5b'/C9a'/N10'/C10) are planar. They are also nearly coplanar with dihedral angles of A/B = 0.48 (17)° and A'/B' = 1.26 (17)°. Rings C (C3a/C4/C5/C5a/C10a/C10b), D (O1/C2/C3/C3a/C10b) and C' (C3a'/C4'/C5'/C5a'/C10/C10'), D' (O1'/C2'/C3'/C3a'/C10') have envelope conformations with atoms C3a and C3a' displaced by -0.472 (5) Å (for ring C), 0.533 (5) Å (for ring D) and -0.491 (5) Å (for ring C'), -0.551 (5) Å (for ring D') from the planes of the other ring atoms, respectively. Rings C and C' have pseudo mirror planes running through atoms C3a and C5a (for ring C) and C3a' and C5a' (for ring C'), while rings D and D' have pseudo twofold axis and pseudo mirror plane, respectively, running through atom C2 and midpoint of C3a—C10b bond (for ring D) and atom C3a' and midpoint of O1'-C2'bond (for ring D'), as can be deduced from the torsion angles (Table 1).
In the crystal structure, intermolecular N—H···O hydrogen bonds (Table 2) link the molecules into chains nearly parallel to c axis (Fig. 2), in which they may be effective in the stabilization of the structure.