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The La atom is ten-coordinate in a capped square–antiprismatic geometry in the title polymeric chain structure, {[La(C6H5N2O2S)3(H2O)2]·3H2O}n. Adjacent chains are linked by hydrogen bonds to give a layer structure.
Supporting information
CCDC reference: 287765
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.007 Å
- R factor = 0.044
- wR factor = 0.110
- Data-to-parameter ratio = 16.0
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT731_ALERT_1_B Bond Calc 0.86(5), Rep 0.850(10) ...... 5.00 su-Rat
O4W -H4W2 1.555 1.555
PLAT731_ALERT_1_B Bond Calc 0.85(5), Rep 0.850(10) ...... 5.00 su-Rat
O5W -H5W1 1.555 1.555
PLAT731_ALERT_1_B Bond Calc 0.85(5), Rep 0.850(10) ...... 5.00 su-Rat
O5W -H5W2 1.555 1.555
PLAT735_ALERT_1_B D-H Calc 0.86(5), Rep 0.850(10) ...... 5.00 su-Rat
O4W -H8# 1.555 1.555
PLAT735_ALERT_1_B D-H Calc 0.85(5), Rep 0.850(10) ...... 5.00 su-Rat
O5W -H9# 1.555 1.555
PLAT735_ALERT_1_B D-H Calc 0.85(5), Rep 0.850(10) ...... 5.00 su-Rat
O5W -H10# 1.555 1.555
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.99
PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ?
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.56 Ratio
PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 10
PLAT731_ALERT_1_C Bond Calc 0.86(3), Rep 0.850(10) ...... 3.00 su-Rat
O1W -H1W1 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.85(3), Rep 0.850(10) ...... 3.00 su-Rat
O2W -H2W1 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.85(3), Rep 0.850(10) ...... 3.00 su-Rat
O2W -H2W2 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.84(4), Rep 0.850(10) ...... 4.00 su-Rat
O3W -H3W1 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.84(4), Rep 0.850(10) ...... 4.00 su-Rat
O3W -H3W2 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.86(3), Rep 0.850(10) ...... 3.00 su-Rat
O4W -H4W1 1.555 1.555
PLAT732_ALERT_1_C Angle Calc 110(5), Rep 110(2) ...... 2.50 su-Rat
H3W1 -O3W -H3W2 1.555 1.555 1.555
PLAT732_ALERT_1_C Angle Calc 111(5), Rep 110(2) ...... 2.50 su-Rat
H5W1 -O5W -H5W2 1.555 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.86(3), Rep 0.850(10) ...... 3.00 su-Rat
O1W -H1# 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.85(3), Rep 0.850(10) ...... 3.00 su-Rat
O2W -H3# 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.85(3), Rep 0.850(10) ...... 3.00 su-Rat
O2W -H4# 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.84(4), Rep 0.850(10) ...... 4.00 su-Rat
O3W -H5# 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.84(4), Rep 0.850(10) ...... 4.00 su-Rat
O3W -H6# 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.86(3), Rep 0.850(10) ...... 3.00 su-Rat
O4W -H7# 1.555 1.555
PLAT736_ALERT_1_C H...A Calc 1.92(3), Rep 1.920(10) ...... 3.00 su-Rat
H1# -O3W 1.555 1.555
PLAT736_ALERT_1_C H...A Calc 2.04(5), Rep 2.03(2) ...... 2.50 su-Rat
H6# -O3 1.555 3.566
PLAT736_ALERT_1_C H...A Calc 2.08(6), Rep 2.09(2) ...... 3.00 su-Rat
H9# -O3W 1.555 3.576
PLAT736_ALERT_1_C H...A Calc 2.07(5), Rep 2.08(2) ...... 2.50 su-Rat
H10# -N4 1.555 3.666
0 ALERT level A = In general: serious problem
6 ALERT level B = Potentially serious problem
23 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
26 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Pyrimidin-2-ylsulfanylacetic acid (102 mg, 0.6 mmol) was suspended in a small volume of water–ethanol (2:1 (v/v) and ammonium hydroxide was added dropwise until it dissolved completely. Lanthanum nitrate (86 mg, 0.2 mmol) was added and the mixture was transferred into a Teflon-lined Parr bomb. The bomb was heated at 413 K for 100 h. The cooled contents were filtered; colorless plates separated after two weeks. Elemental analysis found (calculated) for C18H25LaN6O11S3: C 29.26 (29.35), H 3.40 (3.42), N 11.32% (11.41%). IR (KBr): 3410, 1601, 1535, 1487, 1426, 622, 550, 472 cm−1. {Bill/David: de we remove the IR data, no assignments]
The methylene and aromatic H atoms were generated geometrically (C—H = 0.97 and 0.93 Å) and were included in the refinement in the riding-model approximation, with Uiso(H) values set at 1.2 times Ueq(C). The water H atoms were located in difference Fourier maps and were refined with distance restraints of O—H = 0.85 (1) Å and H···H = 1.39 (1) Å; their displacement parameters were similarly tied to those of the parent atoms. The final difference Fourier map has a large peak at about 1 Å from atom La1.
Data collection: SMART (Bruker, 2003); cell refinement: SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.
catena-Poly[[[diaqua(pyrimidin-2-ylsulfanylacetato)lanthanum(III)]-di- µ-pyrimidin-2-ylsulfanylacetato] trihydrate]
top
Crystal data top
[La(C6H5N2O2S)3(H2O)2]·3H2O | F(000) = 1472 |
Mr = 736.53 | Dx = 1.827 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7684 reflections |
a = 8.8145 (3) Å | θ = 2.3–28.6° |
b = 11.8211 (5) Å | µ = 1.90 mm−1 |
c = 25.887 (1) Å | T = 295 K |
β = 97.046 (1)° | Block, colorless |
V = 2677.0 (2) Å3 | 0.50 × 0.22 × 0.14 mm |
Z = 4 | |
Data collection top
Bruker APEX area-detector diffractometer | 6110 independent reflections |
Radiation source: fine-focus sealed tube | 5749 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
ϕ and ω scans | θmax = 27.5°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→11 |
Tmin = 0.504, Tmax = 0.777 | k = −15→12 |
15909 measured reflections | l = −33→32 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.110 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | w = 1/[σ2(Fo2) + (0.0499P)2 + 4.1463P] where P = (Fo2 + 2Fc2)/3 |
6110 reflections | (Δ/σ)max = 0.001 |
382 parameters | Δρmax = 1.19 e Å−3 |
15 restraints | Δρmin = −0.75 e Å−3 |
Crystal data top
[La(C6H5N2O2S)3(H2O)2]·3H2O | V = 2677.0 (2) Å3 |
Mr = 736.53 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.8145 (3) Å | µ = 1.90 mm−1 |
b = 11.8211 (5) Å | T = 295 K |
c = 25.887 (1) Å | 0.50 × 0.22 × 0.14 mm |
β = 97.046 (1)° | |
Data collection top
Bruker APEX area-detector diffractometer | 6110 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 5749 reflections with I > 2σ(I) |
Tmin = 0.504, Tmax = 0.777 | Rint = 0.029 |
15909 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.044 | 15 restraints |
wR(F2) = 0.110 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | Δρmax = 1.19 e Å−3 |
6110 reflections | Δρmin = −0.75 e Å−3 |
382 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
La1 | 0.24487 (2) | 0.48747 (2) | 0.49842 (1) | 0.0217 (1) | |
S1 | 0.5311 (2) | 0.3943 (1) | 0.69500 (4) | 0.0470 (3) | |
S2 | 0.4673 (2) | 0.0804 (1) | 0.55240 (5) | 0.0476 (3) | |
S3 | −0.0317 (2) | 0.2167 (1) | 0.34125 (4) | 0.0404 (3) | |
O1 | 0.3454 (3) | 0.4736 (3) | 0.5965 (1) | 0.035 (1) | |
O2 | 0.5419 (3) | 0.4989 (2) | 0.5547 (1) | 0.031 (1) | |
O3 | 0.1503 (3) | 0.3031 (2) | 0.5376 (1) | 0.035 (1) | |
O4 | 0.3790 (3) | 0.2962 (2) | 0.5139 (1) | 0.035 (1) | |
O5 | −0.0392 (3) | 0.4333 (2) | 0.4558 (1) | 0.026 (1) | |
O6 | 0.1484 (3) | 0.3640 (3) | 0.4188 (1) | 0.035 (1) | |
O1w | 0.3398 (3) | 0.6877 (3) | 0.5214 (1) | 0.037 (1) | |
O2w | 0.1468 (3) | 0.6245 (3) | 0.4276 (1) | 0.038 (1) | |
O3w | 0.0981 (4) | 0.8355 (3) | 0.5042 (1) | 0.050 (1) | |
O4w | −0.0958 (4) | 0.5996 (3) | 0.3534 (1) | 0.049 (1) | |
O5w | 0.1230 (6) | 1.0288 (4) | 0.4489 (2) | 0.077 (1) | |
N1 | 0.7112 (5) | 0.2556 (4) | 0.6491 (2) | 0.046 (1) | |
N2 | 0.6024 (5) | 0.1919 (4) | 0.7227 (2) | 0.058 (1) | |
N3 | 0.3869 (4) | −0.0388 (3) | 0.6313 (1) | 0.035 (1) | |
N4 | 0.5952 (4) | −0.1016 (3) | 0.5896 (1) | 0.040 (1) | |
N5 | 0.0257 (4) | 0.4134 (3) | 0.2969 (1) | 0.037 (1) | |
N6 | 0.1111 (5) | 0.2424 (4) | 0.2629 (2) | 0.053 (1) | |
C1 | 0.4845 (4) | 0.4851 (3) | 0.5959 (1) | 0.025 (1) | |
C2 | 0.5888 (5) | 0.4845 (4) | 0.6462 (2) | 0.035 (1) | |
C3 | 0.6261 (5) | 0.2679 (4) | 0.6867 (2) | 0.037 (1) | |
C4 | 0.7790 (7) | 0.1555 (5) | 0.6472 (2) | 0.060 (1) | |
C5 | 0.7640 (7) | 0.0724 (5) | 0.6819 (2) | 0.060 (1) | |
C6 | 0.6737 (7) | 0.0952 (5) | 0.7191 (2) | 0.065 (2) | |
C7 | 0.2768 (4) | 0.2565 (3) | 0.5380 (2) | 0.031 (1) | |
C8 | 0.3067 (5) | 0.1532 (4) | 0.5705 (2) | 0.041 (1) | |
C9 | 0.4812 (5) | −0.0313 (3) | 0.5962 (2) | 0.032 (1) | |
C10 | 0.4121 (5) | −0.1244 (4) | 0.6640 (2) | 0.039 (1) | |
C11 | 0.5247 (6) | −0.2007 (4) | 0.6611 (2) | 0.040 (1) | |
C12 | 0.6136 (5) | −0.1871 (4) | 0.6220 (2) | 0.043 (1) | |
C13 | 0.0111 (4) | 0.3731 (3) | 0.4219 (1) | 0.025 (1) | |
C14 | −0.1050 (5) | 0.3133 (4) | 0.3845 (2) | 0.034 (1) | |
C15 | 0.0412 (5) | 0.3026 (4) | 0.2959 (2) | 0.035 (1) | |
C16 | 0.0885 (6) | 0.4681 (5) | 0.2604 (2) | 0.049 (1) | |
C17 | 0.1640 (7) | 0.4162 (5) | 0.2243 (2) | 0.056 (1) | |
C18 | 0.1719 (7) | 0.3016 (5) | 0.2273 (2) | 0.059 (2) | |
H1w1 | 0.275 (3) | 0.740 (3) | 0.512 (2) | 0.044* | |
H1w2 | 0.425 (2) | 0.707 (3) | 0.512 (2) | 0.044* | |
H2w1 | 0.211 (3) | 0.656 (4) | 0.410 (1) | 0.045* | |
H2w2 | 0.064 (3) | 0.612 (4) | 0.408 (1) | 0.045* | |
H3w1 | 0.117 (6) | 0.890 (3) | 0.485 (2) | 0.059* | |
H3w2 | 0.041 (6) | 0.788 (3) | 0.487 (2) | 0.059* | |
H4w1 | −0.184 (3) | 0.588 (4) | 0.363 (2) | 0.059* | |
H4w2 | −0.082 (5) | 0.553 (4) | 0.329 (2) | 0.059* | |
H5w1 | 0.064 (6) | 1.080 (4) | 0.458 (3) | 0.092* | |
H5w2 | 0.203 (4) | 1.058 (5) | 0.439 (3) | 0.092* | |
H2a | 0.5967 | 0.5611 | 0.6597 | 0.041* | |
H2b | 0.6900 | 0.4616 | 0.6391 | 0.041* | |
H4 | 0.8393 | 0.1422 | 0.6207 | 0.072* | |
H5 | 0.8133 | 0.0032 | 0.6803 | 0.072* | |
H6 | 0.6612 | 0.0392 | 0.7434 | 0.078* | |
H8a | 0.2179 | 0.1041 | 0.5659 | 0.049* | |
H8b | 0.3254 | 0.1743 | 0.6069 | 0.049* | |
H10 | 0.3496 | −0.1325 | 0.6902 | 0.046* | |
H11 | 0.5409 | −0.2601 | 0.6847 | 0.048* | |
H12 | 0.6894 | −0.2401 | 0.6182 | 0.052* | |
H14a | −0.1651 | 0.3698 | 0.3640 | 0.041* | |
H14b | −0.1736 | 0.2725 | 0.4044 | 0.041* | |
H16 | 0.0805 | 0.5466 | 0.2593 | 0.059* | |
H17 | 0.2076 | 0.4567 | 0.1991 | 0.067* | |
H18 | 0.2224 | 0.2630 | 0.2031 | 0.071* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
La1 | 0.0157 (1) | 0.0270 (1) | 0.0231 (1) | 0.0040 (1) | 0.0054 (1) | 0.0029 (1) |
S1 | 0.0490 (7) | 0.0660 (8) | 0.0281 (5) | 0.0167 (6) | 0.0127 (5) | 0.0101 (5) |
S2 | 0.0511 (7) | 0.0480 (7) | 0.0480 (7) | 0.0256 (6) | 0.0237 (5) | 0.0187 (5) |
S3 | 0.0508 (7) | 0.0374 (6) | 0.0350 (5) | −0.0092 (5) | 0.0135 (5) | −0.0091 (4) |
O1 | 0.022 (1) | 0.057 (2) | 0.028 (1) | 0.003 (1) | 0.008 (1) | 0.006 (1) |
O2 | 0.023 (1) | 0.043 (2) | 0.027 (1) | 0.003 (1) | 0.010 (1) | 0.004 (1) |
O3 | 0.023 (1) | 0.034 (2) | 0.050 (2) | 0.007 (1) | 0.009 (1) | 0.010 (1) |
O4 | 0.028 (2) | 0.034 (2) | 0.047 (2) | 0.008 (1) | 0.013 (1) | 0.008 (1) |
O5 | 0.021 (1) | 0.031 (1) | 0.026 (1) | 0.004 (1) | 0.008 (1) | −0.002 (1) |
O6 | 0.022 (1) | 0.046 (2) | 0.037 (2) | 0.004 (1) | 0.008 (1) | −0.012 (1) |
O1w | 0.022 (1) | 0.034 (2) | 0.056 (2) | 0.002 (1) | 0.011 (1) | 0.001 (1) |
O2w | 0.028 (2) | 0.048 (2) | 0.037 (2) | 0.004 (1) | 0.004 (1) | 0.014 (1) |
O3w | 0.043 (2) | 0.035 (2) | 0.071 (2) | 0.000 (2) | 0.013 (2) | 0.006 (2) |
O4w | 0.047 (2) | 0.063 (2) | 0.040 (2) | 0.004 (2) | 0.015 (2) | 0.006 (2) |
O5w | 0.073 (3) | 0.066 (3) | 0.101 (4) | 0.012 (2) | 0.048 (3) | 0.023 (3) |
N1 | 0.051 (2) | 0.047 (2) | 0.041 (2) | 0.006 (2) | 0.014 (2) | 0.005 (2) |
N2 | 0.058 (3) | 0.068 (3) | 0.050 (2) | −0.003 (2) | 0.013 (2) | 0.019 (2) |
N3 | 0.032 (2) | 0.036 (2) | 0.038 (2) | 0.007 (2) | 0.009 (2) | 0.005 (2) |
N4 | 0.044 (2) | 0.038 (2) | 0.041 (2) | 0.017 (2) | 0.014 (2) | 0.007 (2) |
N5 | 0.037 (2) | 0.042 (2) | 0.033 (2) | −0.003 (2) | 0.006 (2) | −0.002 (2) |
N6 | 0.067 (3) | 0.049 (2) | 0.047 (2) | −0.005 (2) | 0.028 (2) | −0.013 (2) |
C1 | 0.025 (2) | 0.026 (2) | 0.026 (2) | 0.0049 (14) | 0.007 (2) | 0.000 (1) |
C2 | 0.036 (2) | 0.039 (2) | 0.027 (2) | −0.002 (2) | 0.000 (2) | −0.001 (2) |
C3 | 0.032 (2) | 0.047 (3) | 0.030 (2) | −0.005 (2) | 0.002 (2) | 0.006 (2) |
C4 | 0.072 (4) | 0.056 (3) | 0.057 (3) | 0.009 (3) | 0.023 (3) | 0.000 (3) |
C5 | 0.064 (4) | 0.047 (3) | 0.067 (4) | 0.004 (3) | −0.003 (3) | −0.002 (3) |
C6 | 0.073 (4) | 0.053 (3) | 0.066 (4) | −0.007 (3) | −0.003 (3) | 0.022 (3) |
C7 | 0.025 (2) | 0.030 (2) | 0.038 (2) | 0.002 (2) | 0.004 (2) | −0.002 (2) |
C8 | 0.038 (2) | 0.040 (2) | 0.046 (2) | 0.015 (2) | 0.018 (2) | 0.013 (2) |
C9 | 0.037 (2) | 0.029 (2) | 0.032 (2) | 0.008 (2) | 0.007 (2) | 0.000 (2) |
C10 | 0.035 (2) | 0.043 (2) | 0.039 (2) | −0.001 (2) | 0.009 (2) | 0.006 (2) |
C11 | 0.051 (3) | 0.034 (2) | 0.035 (2) | 0.008 (2) | 0.005 (2) | 0.008 (2) |
C12 | 0.043 (3) | 0.038 (2) | 0.050 (3) | 0.019 (2) | 0.008 (2) | 0.003 (2) |
C13 | 0.025 (2) | 0.026 (2) | 0.026 (2) | 0.004 (1) | 0.007 (1) | 0.002 (1) |
C14 | 0.027 (2) | 0.046 (2) | 0.031 (2) | −0.006 (2) | 0.007 (2) | −0.008 (2) |
C15 | 0.033 (2) | 0.044 (2) | 0.027 (2) | −0.004 (2) | 0.003 (2) | −0.009 (2) |
C16 | 0.057 (3) | 0.046 (3) | 0.044 (3) | −0.007 (2) | 0.005 (2) | 0.000 (2) |
C17 | 0.062 (3) | 0.067 (4) | 0.043 (3) | −0.023 (3) | 0.021 (2) | −0.001 (2) |
C18 | 0.064 (4) | 0.075 (4) | 0.045 (3) | −0.009 (3) | 0.030 (3) | −0.016 (3) |
Geometric parameters (Å, º) top
La1—O1 | 2.590 (3) | N2—C6 | 1.314 (8) |
La1—O2 | 2.838 (3) | N2—C3 | 1.329 (6) |
La1—O2i | 2.466 (3) | N3—C9 | 1.309 (5) |
La1—O3 | 2.584 (3) | N3—C10 | 1.319 (5) |
La1—O4 | 2.560 (3) | N4—C12 | 1.311 (6) |
La1—O5 | 2.687 (3) | N4—C9 | 1.331 (5) |
La1—O5ii | 2.469 (2) | N5—C15 | 1.317 (6) |
La1—O6 | 2.583 (3) | N5—C16 | 1.323 (6) |
La1—O1w | 2.556 (3) | N6—C15 | 1.322 (5) |
La1—O2w | 2.518 (3) | N6—C18 | 1.321 (7) |
S1—C3 | 1.740 (5) | C1—C2 | 1.498 (5) |
S1—C2 | 1.775 (4) | C4—C5 | 1.349 (8) |
S2—C9 | 1.734 (4) | C5—C6 | 1.348 (9) |
S2—C8 | 1.769 (4) | C7—C8 | 1.488 (6) |
S3—C15 | 1.734 (4) | C10—C11 | 1.351 (6) |
S3—C14 | 1.776 (4) | C11—C12 | 1.362 (6) |
O1—C1 | 1.236 (5) | C13—C14 | 1.496 (5) |
O2—C1 | 1.247 (5) | C16—C17 | 1.358 (7) |
O3—C7 | 1.243 (5) | C17—C18 | 1.359 (8) |
O4—C7 | 1.249 (5) | C2—H2a | 0.97 |
O5—C13 | 1.254 (4) | C2—H2b | 0.97 |
O6—C13 | 1.227 (4) | C4—H4 | 0.93 |
O1w—H1w1 | 0.85 (1) | C5—H5 | 0.93 |
O1w—H1w2 | 0.85 (1) | C6—H6 | 0.93 |
O2w—H2w1 | 0.85 (1) | C8—H8a | 0.97 |
O2w—H2w2 | 0.85 (1) | C8—H8b | 0.97 |
O3w—H3w1 | 0.85 (1) | C10—H10 | 0.93 |
O3w—H3w2 | 0.85 (1) | C11—H11 | 0.93 |
O4w—H4w1 | 0.85 (1) | C12—H12 | 0.93 |
O4w—H4w2 | 0.85 (1) | C14—H14a | 0.97 |
O5w—H5w1 | 0.85 (1) | C14—H14b | 0.97 |
O5w—H5w2 | 0.85 (1) | C16—H16 | 0.93 |
N1—C3 | 1.308 (6) | C17—H17 | 0.93 |
N1—C4 | 1.329 (7) | C18—H18 | 0.93 |
| | | |
O1—La1—O2 | 46.9 (1) | N1—C3—N2 | 126.9 (5) |
O1—La1—O2i | 111.0 (1) | N1—C3—S1 | 121.1 (3) |
O1—La1—O3 | 69.5 (1) | N2—C3—S1 | 112.0 (4) |
O1—La1—O4 | 72.2 (1) | N1—C4—C5 | 122.8 (5) |
O1—La1—O5 | 125.2 (1) | C4—C5—C6 | 116.4 (6) |
O1—La1—O5ii | 74.7 (1) | N2—C6—C5 | 123.6 (5) |
O1—La1—O6 | 141.8 (1) | O4—C7—O3 | 122.1 (4) |
O1—La1—O1w | 76.6 (1) | O4—C7—C8 | 120.1 (4) |
O1—La1—O2w | 143.1 (1) | O3—C7—C8 | 117.7 (4) |
O2—La1—O2i | 64.2 (1) | C7—C8—S2 | 110.0 (3) |
O2—La1—O3 | 99.2 (1) | N3—C9—N4 | 126.9 (4) |
O2—La1—O4 | 65.3 (1) | N3—C9—S2 | 120.4 (3) |
O2—La1—O5 | 167.5 (1) | N4—C9—S2 | 112.7 (3) |
O2—La1—O5ii | 114.9 (1) | N3—C10—C11 | 123.0 (4) |
O2—La1—O6 | 129.0 (1) | C10—C11—C12 | 117.1 (4) |
O2—La1—O1w | 65.3 (1) | N4—C12—C11 | 121.9 (4) |
O2—La1—O2w | 123.8 (1) | O6—C13—O5 | 122.1 (4) |
O2i—La1—O3 | 125.35 (1) | O6—C13—C14 | 121.3 (3) |
O2i—La1—O4 | 77.1 (1) | O5—C13—C14 | 116.6 (3) |
O2i—La1—O5ii | 153.8 (1) | C13—C14—S3 | 116.0 (3) |
O2i—La1—O5 | 121.5 (1) | N5—C15—N6 | 127.3 (4) |
O2i—La1—O6 | 77.9 (1) | N5—C15—S3 | 121.3 (3) |
O2i—La1—O1w | 79.6 (1) | N6—C15—S3 | 111.3 (4) |
O2i—La1—O2w | 76.7 (1) | N5—C16—C17 | 123.6 (5) |
O3—La1—O4 | 50.1 (1) | C16—C17—C18 | 116.0 (5) |
O3—La1—O5 | 68.3 (1) | N6—C18—C17 | 123.0 (5) |
O3—La1—O5ii | 80.8 (1) | La1—O1w—H1w1 | 114 (3) |
O3—La1—O6 | 75.3 (1) | La1—O1w—H1w2 | 117 (3) |
O3—La1—O1w | 143.3 (1) | H1w1—O1w—H1w2 | 109 (2) |
O3—La1—O2w | 136.8 (1) | La1—O2w—H2w1 | 118 (3) |
O4—La1—O5 | 104.1 (1) | La1—O2w—H2w2 | 121 (3) |
O4—La1—O5ii | 127.8 (1) | H2w1—O2w—H2w2 | 110 (2) |
O4—La1—O6 | 74.1 (1) | H3w1—O3w—H3w2 | 110 (2) |
O4—La1—O1w | 130.5 (1) | H4w1—O4w—H4w2 | 109 (2) |
O4—La1—O2w | 142.4 (1) | H5w1—O5w—H5w2 | 110 (2) |
O5—La1—O5ii | 65.5 (1) | C1—C2—H2a | 108.5 |
O5—La1—O6 | 48.6 (1) | S1—C2—H2a | 108.5 |
O5—La1—O1w | 125.3 (1) | C1—C2—H2b | 108.5 |
O5—La1—O2w | 68.6 (1) | S1—C2—H2b | 108.5 |
O5ii—La1—O6 | 114.1 (1) | H2a—C2—H2b | 107.5 |
O5ii—La1—O1w | 77.0 (1) | N1—C4—H4 | 118.6 |
O5ii—La1—O2w | 84.2 (1) | C5—C4—H4 | 118.6 |
O6—La1—O1w | 140.8 (1) | C4—C5—H5 | 121.8 |
O6—La1—O2w | 74.5 (1) | C6—C5—H5 | 121.8 |
O1w—La1—O2w | 69.3 (1) | N2—C6—H6 | 118.2 |
C3—S1—C2 | 104.1 (2) | C5—C6—H6 | 118.2 |
C9—S2—C8 | 101.1 (2) | C7—C8—H8a | 109.7 |
C15—S3—C14 | 104.1 (2) | S2—C8—H8a | 109.7 |
C1—O1—La1 | 101.6 (2) | C7—C8—H8b | 109.7 |
C1—O2—La1i | 154.5 (3) | S2—C8—H8b | 109.7 |
C1—O2—La1 | 89.3 (2) | H8a—C8—H8b | 108.2 |
La1i—O2—La1 | 115.82 (10) | N3—C10—H10 | 118.5 |
C7—O3—La1 | 92.6 (2) | C11—C10—H10 | 118.5 |
C7—O4—La1 | 93.6 (2) | C10—C11—H11 | 121.4 |
C13—O5—La1ii | 153.6 (2) | C12—C11—H11 | 121.4 |
C13—O5—La1 | 91.8 (2) | N4—C12—H12 | 119.0 |
La1ii—O5—La1 | 114.49 (9) | C11—C12—H12 | 119.0 |
C13—O6—La1 | 97.5 (2) | C13—C14—H14a | 108.3 |
C3—N1—C4 | 115.4 (4) | S3—C14—H14a | 108.3 |
C6—N2—C3 | 114.8 (5) | C13—C14—H14b | 108.3 |
C9—N3—C10 | 115.2 (4) | S3—C14—H14b | 108.3 |
C12—N4—C9 | 115.8 (4) | H14a—C14—H14b | 107.4 |
C15—N5—C16 | 114.8 (4) | N5—C16—H16 | 118.2 |
C15—N6—C18 | 115.3 (5) | C17—C16—H16 | 118.2 |
O1—C1—O2 | 122.2 (4) | C16—C17—H17 | 122.0 |
O1—C1—C2 | 119.5 (4) | C18—C17—H17 | 122.0 |
O2—C1—C2 | 118.3 (4) | N6—C18—H18 | 118.5 |
C1—C2—S1 | 115.0 (3) | C17—C18—H18 | 118.5 |
| | | |
O2i—La1—O1—C1 | 4.6 (3) | O2w—La1—O6—C13 | −76.2 (2) |
O5ii—La1—O1—C1 | −148.5 (3) | O1w—La1—O6—C13 | −99.3 (3) |
O2w—La1—O1—C1 | −91.2 (3) | O4—La1—O6—C13 | 124.7 (3) |
O1w—La1—O1—C1 | −68.5 (2) | O3—La1—O6—C13 | 72.6 (2) |
O4—La1—O1—C1 | 72.6 (2) | O1—La1—O6—C13 | 95.8 (3) |
O3—La1—O1—C1 | 125.8 (3) | O5—La1—O6—C13 | −1.3 (2) |
O6—La1—O1—C1 | 101.8 (3) | O2—La1—O6—C13 | 162.6 (2) |
O5—La1—O1—C1 | 167.5 (2) | La1—O1—C1—O2 | −0.1 (4) |
O2—La1—O1—C1 | 0.1 (2) | La1—O1—C1—C2 | 178.9 (3) |
O2i—La1—O2—C1 | −175.4 (3) | La1i—O2—C1—O1 | −170.2 (4) |
O5ii—La1—O2—C1 | 33.7 (2) | La1—O2—C1—O1 | 0.1 (4) |
O2w—La1—O2—C1 | 133.8 (2) | La1i—O2—C1—C2 | 10.8 (8) |
O1w—La1—O2—C1 | 94.6 (2) | La1—O2—C1—C2 | −178.9 (3) |
O4—La1—O2—C1 | −88.3 (2) | O1—C1—C2—S1 | 33.9 (5) |
O3—La1—O2—C1 | −50.5 (2) | O2—C1—C2—S1 | −147.1 (3) |
O6—La1—O2—C1 | −129.0 (2) | C3—S1—C2—C1 | 93.1 (3) |
O1—La1—O2—C1 | 0.0 (2) | C4—N1—C3—N2 | 0.7 (7) |
O5—La1—O2—C1 | −55.3 (4) | C4—N1—C3—S1 | 179.4 (4) |
O5ii—La1—O2—La1i | −151.0 (1) | C6—N2—C3—N1 | 0.0 (8) |
O2w—La1—O2—La1i | −50.9 (2) | C6—N2—C3—S1 | −178.8 (4) |
O1w—La1—O2—La1i | −90.1 (1) | C2—S1—C3—N1 | −2.7 (4) |
O4—La1—O2—La1i | 87.1 (1) | C2—S1—C3—N2 | 176.2 (3) |
O3—La1—O2—La1i | 124.9 (1) | C3—N1—C4—C5 | −1.1 (8) |
O6—La1—O2—La1i | 46.4 (2) | N1—C4—C5—C6 | 0.9 (9) |
O1—La1—O2—La1i | 175.3 (2) | C3—N2—C6—C5 | −0.3 (9) |
O5—La1—O2—La1i | 120.0 (3) | C4—C5—C6—N2 | −0.2 (9) |
O2i—La1—O3—C7 | 25.3 (3) | La1—O4—C7—O3 | 13.4 (4) |
O5ii—La1—O3—C7 | −153.4 (3) | La1—O4—C7—C8 | −163.7 (4) |
O2w—La1—O3—C7 | 135.4 (2) | La1—O3—C7—O4 | −13.3 (4) |
O1w—La1—O3—C7 | −100.1 (3) | La1—O3—C7—C8 | 163.9 (3) |
O4—La1—O3—C7 | 7.1 (2) | O4—C7—C8—S2 | −18.4 (5) |
O6—La1—O3—C7 | 88.5 (2) | O3—C7—C8—S2 | 164.4 (3) |
O1—La1—O3—C7 | −76.4 (2) | C9—S2—C8—C7 | 178.3 (3) |
O5—La1—O3—C7 | 139.4 (3) | C10—N3—C9—N4 | 1.6 (7) |
O2—La1—O3—C7 | −39.5 (3) | C10—N3—C9—S2 | −177.2 (3) |
O2i—La1—O4—C7 | −171.9 (3) | C12—N4—C9—N3 | 0.2 (7) |
O5ii—La1—O4—C7 | 17.5 (3) | C12—N4—C9—S2 | 179.0 (4) |
O2w—La1—O4—C7 | −125.3 (2) | C8—S2—C9—N3 | −2.2 (4) |
O1w—La1—O4—C7 | 124.3 (2) | C8—S2—C9—N4 | 178.8 (4) |
O3—La1—O4—C7 | −7.1 (2) | C9—N3—C10—C11 | −1.4 (7) |
O6—La1—O4—C7 | −91.0 (2) | N3—C10—C11—C12 | −0.5 (7) |
O1—La1—O4—C7 | 70.8 (2) | C9—N4—C12—C11 | −2.3 (7) |
O5—La1—O4—C7 | −52.2 (3) | C10—C11—C12—N4 | 2.5 (7) |
O2—La1—O4—C7 | 120.8 (3) | La1—O6—C13—O5 | 2.5 (4) |
O2i—La1—O5—C13 | 31.2 (2) | La1—O6—C13—C14 | −178.3 (3) |
O5ii—La1—O5—C13 | −177.5 (3) | La1ii—O5—C13—O6 | −177.3 (4) |
O2w—La1—O5—C13 | 89.1 (2) | La1—O5—C13—O6 | −2.4 (4) |
O1w—La1—O5—C13 | 131.2 (2) | La1ii—O5—C13—C14 | 3.4 (7) |
O4—La1—O5—C13 | −52.1 (2) | La1—O5—C13—C14 | 178.4 (3) |
O3—La1—O5—C13 | −88.0 (2) | O6—C13—C14—S3 | 7.3 (5) |
O6—La1—O5—C13 | 1.3 (2) | O5—C13—C14—S3 | −173.4 (3) |
O1—La1—O5—C13 | −130.1 (2) | C15—S3—C14—C13 | −74.9 (4) |
O2—La1—O5—C13 | −82.8 (4) | C16—N5—C15—N6 | −0.1 (7) |
O2i—La1—O5—La1ii | −151.3 (1) | C16—N5—C15—S3 | 179.2 (3) |
O2w—La1—O5—La1ii | −93.4 (1) | C18—N6—C15—N5 | 0.2 (7) |
O1w—La1—O5—La1ii | −51.3 (2) | C18—N6—C15—S3 | −179.2 (4) |
O4—La1—O5—La1ii | 125.4 (1) | C14—S3—C15—N5 | −4.2 (4) |
O3—La1—O5—La1ii | 89.6 (1) | C14—S3—C15—N6 | 175.2 (3) |
O6—La1—O5—La1ii | 178.8 (2) | C15—N5—C16—C17 | −0.2 (7) |
O1—La1—O5—La1ii | 47.5 (2) | N5—C16—C17—C18 | 0.3 (9) |
O2—La1—O5—La1ii | 94.8 (3) | C15—N6—C18—C17 | 0.0 (8) |
O2i—La1—O6—C13 | −155.6 (3) | C16—C17—C18—N6 | −0.2 (9) |
O5ii—La1—O6—C13 | −0.1 (3) | | |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H1w1···O3w | 0.85 (1) | 1.92 (1) | 2.749 (5) | 165 (4) |
O1w—H1w2···O4i | 0.85 (1) | 1.93 (2) | 2.751 (4) | 164 (4) |
O2w—H2w1···N1i | 0.85 (1) | 2.05 (2) | 2.852 (5) | 158 (4) |
O2w—H2w2···O4w | 0.85 (1) | 1.88 (2) | 2.709 (5) | 167 (4) |
O3w—H3w1···O5w | 0.85 (1) | 1.89 (2) | 2.718 (5) | 166 (6) |
O3w—H3w2···O3ii | 0.85 (1) | 2.03 (2) | 2.840 (5) | 158 (5) |
O4w—H4w1···O1ii | 0.85 (1) | 2.01 (2) | 2.823 (4) | 160 (5) |
O4w—H4w2···N5 | 0.85 (1) | 2.13 (3) | 2.918 (5) | 154 (5) |
O5w—H5w1···O3wiii | 0.85 (1) | 2.09 (2) | 2.903 (6) | 162 (6) |
O5w—H5w2···N4i | 0.85 (1) | 2.08 (2) | 2.918 (6) | 169 (6) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1; (iii) −x, −y+2, −z+1. |
Experimental details
Crystal data |
Chemical formula | [La(C6H5N2O2S)3(H2O)2]·3H2O |
Mr | 736.53 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 8.8145 (3), 11.8211 (5), 25.887 (1) |
β (°) | 97.046 (1) |
V (Å3) | 2677.0 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.90 |
Crystal size (mm) | 0.50 × 0.22 × 0.14 |
|
Data collection |
Diffractometer | Bruker APEX area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.504, 0.777 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15909, 6110, 5749 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.650 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.110, 1.16 |
No. of reflections | 6110 |
No. of parameters | 382 |
No. of restraints | 15 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.19, −0.75 |
Selected geometric parameters (Å, º) topLa1—O1 | 2.590 (3) | La1—O5 | 2.687 (3) |
La1—O2 | 2.838 (3) | La1—O5ii | 2.469 (2) |
La1—O2i | 2.466 (3) | La1—O6 | 2.583 (3) |
La1—O3 | 2.584 (3) | La1—O1w | 2.556 (3) |
La1—O4 | 2.560 (3) | La1—O2w | 2.518 (3) |
| | | |
O1—La1—O2 | 46.9 (1) | O2i—La1—O2w | 76.7 (1) |
O1—La1—O2i | 111.0 (1) | O3—La1—O4 | 50.1 (1) |
O1—La1—O3 | 69.5 (1) | O3—La1—O5 | 68.3 (1) |
O1—La1—O4 | 72.2 (1) | O3—La1—O5ii | 80.8 (1) |
O1—La1—O5 | 125.2 (1) | O3—La1—O6 | 75.3 (1) |
O1—La1—O5ii | 74.7 (1) | O3—La1—O1w | 143.3 (1) |
O1—La1—O6 | 141.8 (1) | O3—La1—O2w | 136.8 (1) |
O1—La1—O1w | 76.6 (1) | O4—La1—O5 | 104.1 (1) |
O1—La1—O2w | 143.1 (1) | O4—La1—O5ii | 127.8 (1) |
O2—La1—O2i | 64.2 (1) | O4—La1—O6 | 74.1 (1) |
O2—La1—O3 | 99.2 (1) | O4—La1—O1w | 130.5 (1) |
O2—La1—O4 | 65.3 (1) | O4—La1—O2w | 142.4 (1) |
O2—La1—O5 | 167.5 (1) | O5—La1—O5ii | 65.5 (1) |
O2—La1—O5ii | 114.9 (1) | O5—La1—O6 | 48.6 (1) |
O2—La1—O6 | 129.0 (1) | O5—La1—O1w | 125.3 (1) |
O2—La1—O1w | 65.3 (1) | O5—La1—O2w | 68.6 (1) |
O2—La1—O2w | 123.8 (1) | O5ii—La1—O6 | 114.1 (1) |
O2i—La1—O3 | 125.35 (1) | O5ii—La1—O1w | 77.0 (1) |
O2i—La1—O4 | 77.1 (1) | O5ii—La1—O2w | 84.2 (1) |
O2i—La1—O5ii | 153.8 (1) | O6—La1—O1w | 140.8 (1) |
O2i—La1—O5 | 121.5 (1) | O6—La1—O2w | 74.5 (1) |
O2i—La1—O6 | 77.9 (1) | O1w—La1—O2w | 69.3 (1) |
O2i—La1—O1w | 79.6 (1) | | |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H1w1···O3w | 0.85 (1) | 1.92 (1) | 2.749 (5) | 165 (4) |
O1w—H1w2···O4i | 0.85 (1) | 1.93 (2) | 2.751 (4) | 164 (4) |
O2w—H2w1···N1i | 0.85 (1) | 2.05 (2) | 2.852 (5) | 158 (4) |
O2w—H2w2···O4w | 0.85 (1) | 1.88 (2) | 2.709 (5) | 167 (4) |
O3w—H3w1···O5w | 0.85 (1) | 1.89 (2) | 2.718 (5) | 166 (6) |
O3w—H3w2···O3ii | 0.85 (1) | 2.03 (2) | 2.840 (5) | 158 (5) |
O4w—H4w1···O1ii | 0.85 (1) | 2.01 (2) | 2.823 (4) | 160 (5) |
O4w—H4w2···N5 | 0.85 (1) | 2.13 (3) | 2.918 (5) | 154 (5) |
O5w—H5w1···O3wiii | 0.85 (1) | 2.09 (2) | 2.903 (6) | 162 (6) |
O5w—H5w2···N4i | 0.85 (1) | 2.08 (2) | 2.918 (6) | 169 (6) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1; (iii) −x, −y+2, −z+1. |
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We have reported several metal derivatives of the 4-pyridylthioacetic acid (Fang et al., 2004; Huang, Zhang, Chen & Ng, 2004; Huang, Zhang, Chen, Zhou et al., 2004; Zhang et al., 2003, 2004a,b); the pyridyl N atom in these complexes typically interact through hydrogen bonds. The studies continue with the 2-pyrimidinyl analog of this heteroarylthioacetic acid; few metal derivatives of this carboxylic acid have been reported (Ng et al., 1993; Ma et al., 2004). The present lanthanum(III) derivative, (I), is chelated by the carboxylate portion of the pyrimidin-2-ylsulfanylacetate, but coordination by water molecules as well as two bridging interactions lead to a ten-coordinate environment of the metal atom (Fig. 1). The geometry is better regarded as a capped square–antiprism (Fig. 2); the capping O atoms are farthest away compared with the other eight O atoms that comprise the square–antiprism (Table 1). The compound adopts a chain motif arising from carboxylate bridging (Fig. 3); adjacent chains are linked through hydrogen bonds involving the lattice water molecules (Table 2) in layers.