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Two imidazolium hypodiphosphates, (C
3H
5N
2)(H
3P
2O
6) (I) and (C
3H
5N
2)
2(H
2P
2O
6) (II), have been synthesized and structurally characterized. In both metal-free organic–inorganic hybrids (I) and (II), the hypodiphosphate mono- and dianions, (H
3P
2O
6)
− and (H
2P
2O
6)
2−, form hydrogen-bonded frameworks of different types, to which the organic cations are linked via N—H
O and C—H
O hydrogen bonds. The purity of the compounds was confirmed by powder X-ray diffraction. Differential scanning calorimetry of compound (I) revealed two structural phase transitions: continuous at 311.8 K [cooling/heating; from high-temperature phase (HTP) to room-temperature phase (RTP)] and a discontinuous one at 287.9/289.2 K [RTP → low-temperature phase (LTP)]. Compound (I) is characterized in a wide temperature range by single-crystal and powder X-ray diffraction methods. Crystal structures of high- and low-temperature phases are determined, which show orthorhombic (HTP,
Pnna, No. 52) → monoclinic (LTP,
P2
1/
n11, No. 14,
a-axis doubled) structural change on cooling with an intermediate incommensurately modulated phase (RTP). Dynamic properties of polycrystalline (I) were studied by means of dielectric spectroscopy. The dielectric behaviour is explained by the motion of imidazolium cations.
Supporting information
B-IncStrDB reference: 16472EnKoLb
CCDC references: 2024300; 2024301; 2024302; 2024303
For all structures, data collection: CrysAlis PRO 1.171.39.46 (Rigaku OD, 2018); cell refinement: CrysAlis PRO 1.171.39.46 (Rigaku OD, 2018); data reduction: CrysAlis PRO 1.171.39.46 (Rigaku OD, 2018). Program(s) used to solve structure: SHELXT-2014/7 (Sheldrick, 2015) for I-HTP, I_LTP, (II). For all structures, program(s) used to refine structure: SHELXL2014/7 (Sheldrick, 2015).
Crystal data top
(C3H5N2)·(H3O6P2) | Dx = 1.811 Mg m−3 |
Mr = 230.05 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pnna | Cell parameters from 4207 reflections |
a = 7.014 (3) Å | θ = 4.7–29.0° |
b = 8.361 (3) Å | µ = 0.52 mm−1 |
c = 14.389 (5) Å | T = 326 K |
V = 843.8 (6) Å3 | Plate, colourless |
Z = 4 | 0.35 × 0.21 × 0.10 mm |
F(000) = 472 | |
Data collection top
Agilent Technologies, Xcalibur R diffractometer | 1134 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 863 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
Detector resolution: 10.6249 pixels mm-1 | θmax = 29.5°, θmin = 2.8° |
ω scans | h = −9→9 |
Absorption correction: analytical CrysAlisPro 1.171.39.46 (Rigaku Oxford Diffraction, 2018)
Analytical numeric absorption correction using a multifaceted crystal
model based on expressions derived by R.C. Clark & J.S. Reid.
(Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897)
Empirical absorption correction using spherical harmonics,
implemented in SCALE3 ABSPACK scaling algorithm. | k = −11→11 |
Tmin = 0.879, Tmax = 0.960 | l = −19→19 |
12181 measured reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.035 | H-atom parameters constrained |
wR(F2) = 0.104 | w = 1/[σ2(Fo2) + (0.0507P)2 + 0.2662P] where P = (Fo2 + 2Fc2)/3 |
S = 1.10 | (Δ/σ)max < 0.001 |
1134 reflections | Δρmax = 0.22 e Å−3 |
101 parameters | Δρmin = −0.31 e Å−3 |
64 restraints | Extinction correction: SHELXL-2014/7 (Sheldrick 2014, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: dual | Extinction coefficient: 0.065 (5) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
P1 | 0.59456 (8) | −0.00006 (5) | 0.33491 (3) | 0.0431 (2) | |
O1 | 0.5287 (3) | 0.07335 (14) | 0.42605 (9) | 0.0594 (4) | |
H1 | 0.4973 | 0.0021 | 0.4620 | 0.089* | 0.5 |
O2 | 0.5307 (2) | −0.17364 (15) | 0.32531 (8) | 0.0555 (4) | |
H2 | 0.5169 | −0.1954 | 0.2702 | 0.083* | 0.5 |
O3 | 0.5315 (2) | 0.09995 (15) | 0.25206 (9) | 0.0539 (4) | |
H3 | 0.5339 | 0.1950 | 0.2661 | 0.081* | 0.5 |
N1A | 0.318 (3) | 0.3850 (17) | 0.4513 (12) | 0.019 (4)* | 0.1 |
H1NA | 0.3469 | 0.2880 | 0.4373 | 0.023* | 0.1 |
C2A | 0.276 (3) | 0.497 (2) | 0.3892 (10) | 0.023 (4)* | 0.1 |
H2A | 0.2699 | 0.4846 | 0.3250 | 0.028* | 0.1 |
N3A | 0.245 (4) | 0.630 (2) | 0.4369 (12) | 0.035 (6)* | 0.1 |
H3NA | 0.2140 | 0.7215 | 0.4135 | 0.042* | 0.1 |
C4A | 0.270 (3) | 0.5991 (19) | 0.5292 (11) | 0.037 (5)* | 0.1 |
H4A | 0.2621 | 0.6739 | 0.5769 | 0.045* | 0.1 |
C5A | 0.309 (4) | 0.442 (2) | 0.5402 (11) | 0.033 (6)* | 0.1 |
H5A | 0.3258 | 0.3862 | 0.5954 | 0.039* | 0.1 |
N1B | 0.3068 (14) | 0.3895 (9) | 0.5180 (6) | 0.038 (2)* | 0.2 |
H1NB | 0.3314 | 0.3065 | 0.5512 | 0.045* | 0.2 |
C2B | 0.2987 (17) | 0.3952 (10) | 0.4260 (6) | 0.039 (3)* | 0.2 |
H2B | 0.3185 | 0.3097 | 0.3859 | 0.047* | 0.2 |
N3B | 0.2573 (15) | 0.5438 (10) | 0.4012 (6) | 0.034 (2)* | 0.2 |
H3NB | 0.2395 | 0.5753 | 0.3450 | 0.041* | 0.2 |
C4B | 0.247 (2) | 0.6397 (12) | 0.4777 (6) | 0.058 (4)* | 0.2 |
H4B | 0.2295 | 0.7499 | 0.4794 | 0.069* | 0.2 |
C5B | 0.2687 (15) | 0.5398 (10) | 0.5504 (6) | 0.033 (3)* | 0.2 |
H5B | 0.2591 | 0.5685 | 0.6127 | 0.039* | 0.2 |
N1C | 0.212 (2) | 0.5834 (16) | 0.5399 (7) | 0.021 (2)* | 0.2 |
H1NC | 0.1745 | 0.6461 | 0.5836 | 0.025* | 0.2 |
C2C | 0.254 (2) | 0.4299 (17) | 0.5503 (8) | 0.045 (5)* | 0.2 |
H2C | 0.2476 | 0.3719 | 0.6054 | 0.054* | 0.2 |
N3C | 0.3059 (18) | 0.3738 (11) | 0.4679 (7) | 0.027 (2)* | 0.2 |
H3NC | 0.3395 | 0.2769 | 0.4564 | 0.032* | 0.2 |
C4C | 0.2976 (15) | 0.4949 (13) | 0.4046 (7) | 0.025 (2)* | 0.2 |
H4C | 0.3281 | 0.4874 | 0.3418 | 0.031* | 0.2 |
C5C | 0.237 (3) | 0.6272 (14) | 0.4492 (9) | 0.034 (4)* | 0.2 |
H5C | 0.2172 | 0.7279 | 0.4235 | 0.041* | 0.2 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1 | 0.0726 (4) | 0.0295 (3) | 0.0271 (3) | −0.00982 (19) | 0.00558 (18) | −0.00153 (16) |
O1 | 0.1093 (12) | 0.0349 (7) | 0.0339 (7) | 0.0028 (7) | 0.0159 (7) | −0.0041 (5) |
O2 | 0.0904 (10) | 0.0317 (7) | 0.0444 (7) | −0.0191 (7) | 0.0149 (7) | −0.0047 (5) |
O3 | 0.0817 (9) | 0.0471 (7) | 0.0328 (6) | −0.0095 (7) | −0.0079 (6) | 0.0053 (5) |
Geometric parameters (Å, º) top
P1—O1 | 1.5198 (13) | N1B—H1NB | 0.8600 |
P1—O3 | 1.5219 (13) | C2B—N3B | 1.325 (3) |
P1—O2 | 1.5252 (14) | C2B—H2B | 0.9300 |
P1—P1i | 2.1805 (14) | N3B—C4B | 1.364 (3) |
O1—H1 | 0.8200 | N3B—H3NB | 0.8600 |
O2—H2 | 0.8200 | C4B—C5B | 1.347 (3) |
O3—H3 | 0.8200 | C4B—H4B | 0.9300 |
N1A—C2A | 1.327 (2) | C5B—H5B | 0.9300 |
N1A—C5A | 1.368 (2) | N1C—C2C | 1.326 (3) |
N1A—H1NA | 0.8600 | N1C—C5C | 1.368 (3) |
C2A—N3A | 1.327 (2) | N1C—H1NC | 0.8600 |
C2A—H2A | 0.9300 | C2C—N3C | 1.326 (3) |
N3A—C4A | 1.366 (2) | C2C—H2C | 0.9300 |
N3A—H3NA | 0.8600 | N3C—C4C | 1.363 (3) |
C4A—C5A | 1.348 (2) | N3C—H3NC | 0.8600 |
C4A—H4A | 0.9300 | C4C—C5C | 1.347 (3) |
C5A—H5A | 0.9300 | C4C—H4C | 0.9300 |
N1B—C2B | 1.326 (3) | C5C—H5C | 0.9300 |
N1B—C5B | 1.367 (3) | | |
| | | |
O1—P1—O3 | 111.45 (9) | N3B—C2B—N1B | 108.2 (8) |
O1—P1—O2 | 111.91 (7) | N3B—C2B—H2B | 125.9 |
O3—P1—O2 | 111.50 (8) | N1B—C2B—H2B | 125.9 |
O1—P1—P1i | 107.67 (7) | C2B—N3B—C4B | 110.2 (9) |
O3—P1—P1i | 106.89 (6) | C2B—N3B—H3NB | 124.9 |
O2—P1—P1i | 107.11 (7) | C4B—N3B—H3NB | 124.9 |
P1—O1—H1 | 109.5 | C5B—C4B—N3B | 104.9 (8) |
P1—O2—H2 | 109.5 | C5B—C4B—H4B | 127.6 |
P1—O3—H3 | 109.5 | N3B—C4B—H4B | 127.6 |
C2A—N1A—C5A | 111.8 (12) | C4B—C5B—N1B | 109.1 (7) |
C2A—N1A—H1NA | 124.1 | C4B—C5B—H5B | 125.5 |
C5A—N1A—H1NA | 124.1 | N1B—C5B—H5B | 125.5 |
N3A—C2A—N1A | 106.4 (12) | C2C—N1C—C5C | 109.8 (10) |
N3A—C2A—H2A | 126.8 | C2C—N1C—H1NC | 125.1 |
N1A—C2A—H2A | 126.8 | C5C—N1C—H1NC | 125.1 |
C2A—N3A—C4A | 108.7 (11) | N1C—C2C—N3C | 107.6 (10) |
C2A—N3A—H3NA | 125.7 | N1C—C2C—H2C | 126.2 |
C4A—N3A—H3NA | 125.7 | N3C—C2C—H2C | 126.2 |
C5A—C4A—N3A | 109.1 (11) | C2C—N3C—C4C | 108.9 (8) |
C5A—C4A—H4A | 125.5 | C2C—N3C—H3NC | 125.6 |
N3A—C4A—H4A | 125.5 | C4C—N3C—H3NC | 125.6 |
C4A—C5A—N1A | 103.9 (11) | C5C—C4C—N3C | 107.8 (8) |
C4A—C5A—H5A | 128.1 | C5C—C4C—H4C | 126.1 |
N1A—C5A—H5A | 128.1 | N3C—C4C—H4C | 126.1 |
C2B—N1B—C5B | 107.4 (7) | C4C—C5C—N1C | 106.0 (9) |
C2B—N1B—H1NB | 126.3 | C4C—C5C—H5C | 127.0 |
C5B—N1B—H1NB | 126.3 | N1C—C5C—H5C | 127.0 |
| | | |
C5A—N1A—C2A—N3A | 1.8 (10) | C2C—N3C—C4C—C5C | −0.6 (14) |
N1A—C2A—N3A—C4A | 0.7 (10) | N3C—C4C—C5C—N1C | 0.6 (15) |
C2A—N3A—C4A—C5A | −2.9 (16) | C2C—N1C—C5C—C4C | −0.4 (13) |
N3A—C4A—C5A—N1A | 3.8 (18) | O1—P1—P1i—O1i | 50.17 (11) |
C2A—N1A—C5A—C4A | −3.5 (15) | O2—P1—P1i—O1i | −70.35 (7) |
C5B—N1B—C2B—N3B | 0.1 (8) | O3—P1—P1i—O1i | 170.03 (7) |
N1B—C2B—N3B—C4B | 3.0 (8) | O1—P1—P1i—O2i | −70.35 (7) |
C2B—N3B—C4B—C5B | −4.9 (11) | O2—P1—P1i—O2i | 169.13 (10) |
N3B—C4B—C5B—N1B | 4.9 (12) | O3—P1—P1i—O2i | 49.51 (7) |
C2B—N1B—C5B—C4B | −3.3 (11) | O1—P1—P1i—O3i | 170.03 (7) |
C5C—N1C—C2C—N3C | 0.1 (9) | O2—P1—P1i—O3i | 49.51 (7) |
N1C—C2C—N3C—C4C | 0.3 (9) | O3—P1—P1i—O3i | −70.11 (11) |
Symmetry code: (i) −x+3/2, −y, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O1ii | 0.82 | 1.74 | 2.489 (3) | 151 |
O2—H2···O2iii | 0.82 | 1.76 | 2.516 (2) | 153 |
O3—H3···O3iv | 0.82 | 1.73 | 2.510 (3) | 157 |
N1A—H1NA···O1 | 0.86 | 2.21 | 3.018 (14) | 157 |
N3A—H3NA···O1v | 0.86 | 2.42 | 3.138 (18) | 141 |
N1B—H1NB···O2ii | 0.86 | 2.31 | 3.105 (8) | 154 |
N3B—H3NB···O3vi | 0.86 | 2.37 | 3.031 (9) | 134 |
N1C—H1NC···O2vii | 0.86 | 2.24 | 3.083 (11) | 168 |
N3C—H3NC···O1 | 0.86 | 2.20 | 3.019 (10) | 159 |
C2A—H2A···O3iv | 0.93 | 2.26 | 2.828 (19) | 119 |
C4A—H4A···O1viii | 0.93 | 2.57 | 3.147 (17) | 120 |
C4A—H4A···O2vii | 0.93 | 2.50 | 3.289 (17) | 143 |
C5A—H5A···O2ii | 0.93 | 2.34 | 3.171 (18) | 149 |
C2B—H2B···O1 | 0.93 | 2.53 | 3.138 (9) | 123 |
C4B—H4B···O1v | 0.93 | 2.46 | 3.171 (12) | 133 |
C5B—H5B···O3ix | 0.93 | 2.50 | 3.261 (9) | 139 |
C2C—H2C···O2ii | 0.93 | 2.48 | 3.175 (13) | 131 |
C2C—H2C···O3x | 0.93 | 2.61 | 3.305 (12) | 132 |
C4C—H4C···O3iv | 0.93 | 2.10 | 2.898 (10) | 144 |
C5C—H5C···O1v | 0.93 | 2.40 | 3.141 (13) | 137 |
Symmetry codes: (ii) −x+1, −y, −z+1; (iii) x, −y−1/2, −z+1/2; (iv) x, −y+1/2, −z+1/2; (v) −x+1/2, −y+1, z; (vi) −x+1/2, y+1/2, −z+1/2; (vii) x−1/2, y+1, −z+1; (viii) −x+1, −y+1, −z+1; (ix) −x+1, y+1/2, z+1/2; (x) x−1/2, −y+1/2, z+1/2. |
Crystal data top
(C3H5N2)·(H3O6P2) | Dx = 1.823 Mg m−3 |
Mr = 230.05 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pnna | Cell parameters from 4526 reflections |
a = 6.962 (3) Å | θ = 4.7–29.1° |
b = 8.368 (3) Å | µ = 0.52 mm−1 |
c = 14.388 (4) Å | T = 291 K |
V = 838.2 (5) Å3 | Plate, colourless |
Z = 4 | 0.35 × 0.21 × 0.10 mm |
F(000) = 472 | |
Data collection top
Agilent Technologies, Xcalibur R diffractometer | 1128 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 901 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
Detector resolution: 10.6249 pixels mm-1 | θmax = 29.2°, θmin = 2.8° |
ω scans | h = −9→9 |
Absorption correction: analytical CrysAlisPro 1.171.39.46 (Rigaku Oxford Diffraction, 2018)
Analytical numeric absorption correction using a multifaceted crystal
model based on expressions derived by R.C. Clark & J.S. Reid.
(Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897)
Empirical absorption correction using spherical harmonics,
implemented in SCALE3 ABSPACK scaling algorithm. | k = −11→11 |
Tmin = 0.868, Tmax = 0.957 | l = −19→19 |
12065 measured reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.035 | H-atom parameters constrained |
wR(F2) = 0.095 | w = 1/[σ2(Fo2) + (0.0419P)2 + 0.4756P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
1128 reflections | Δρmax = 0.24 e Å−3 |
101 parameters | Δρmin = −0.39 e Å−3 |
35 restraints | Extinction correction: SHELXL-2014/7 (Sheldrick 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: isomorphous structure methods | Extinction coefficient: 0.065 (4) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
P1 | 0.59322 (8) | 0.00009 (5) | 0.33478 (3) | 0.0410 (2) | |
O1 | 0.5268 (3) | 0.07328 (15) | 0.42589 (9) | 0.0537 (4) | |
H1 | 0.514694 | 0.002730 | 0.465006 | 0.081* | 0.5 |
O2 | 0.5286 (3) | −0.17341 (16) | 0.32510 (9) | 0.0524 (4) | |
H2 | 0.522141 | −0.196980 | 0.269866 | 0.079* | 0.5 |
O3 | 0.5298 (2) | 0.10050 (16) | 0.25196 (9) | 0.0509 (4) | |
H3 | 0.536109 | 0.195536 | 0.265515 | 0.076* | 0.5 |
N1A | 0.315 (4) | 0.3899 (19) | 0.4357 (10) | 0.018 (5)* | 0.1 |
H1A | 0.341530 | 0.301228 | 0.408235 | 0.022* | 0.1 |
C2A | 0.262 (4) | 0.519 (2) | 0.3881 (10) | 0.014 (4)* | 0.1 |
H2A | 0.240136 | 0.530347 | 0.324739 | 0.017* | 0.1 |
N3A | 0.249 (5) | 0.626 (2) | 0.4558 (12) | 0.042 (11)* | 0.1 |
H3A | 0.222872 | 0.725672 | 0.446907 | 0.051* | 0.1 |
C4A | 0.282 (4) | 0.5602 (19) | 0.5414 (12) | 0.027 (6)* | 0.1 |
H4A | 0.273958 | 0.613810 | 0.597862 | 0.033* | 0.1 |
C5A | 0.327 (3) | 0.405 (2) | 0.5304 (10) | 0.010 (3)* | 0.1 |
H5A | 0.357571 | 0.328163 | 0.574925 | 0.012* | 0.1 |
N1B | 0.285 (2) | 0.3941 (11) | 0.5211 (7) | 0.036 (3)* | 0.2 |
H1B | 0.309717 | 0.313912 | 0.556397 | 0.044* | 0.2 |
C2B | 0.268 (2) | 0.3814 (9) | 0.4293 (7) | 0.029 (3)* | 0.2 |
H2B | 0.286994 | 0.292095 | 0.391904 | 0.035* | 0.2 |
N3B | 0.2177 (18) | 0.5286 (9) | 0.4046 (6) | 0.024 (3)* | 0.2 |
H3B | 0.201627 | 0.558654 | 0.348010 | 0.028* | 0.2 |
C4B | 0.194 (2) | 0.6268 (14) | 0.4798 (7) | 0.036 (3)* | 0.2 |
H4B | 0.143740 | 0.729692 | 0.479366 | 0.043* | 0.2 |
C5B | 0.259 (3) | 0.5459 (12) | 0.5546 (8) | 0.038 (4)* | 0.2 |
H5B | 0.280296 | 0.583857 | 0.614431 | 0.046* | 0.2 |
N1C | 0.212 (3) | 0.5622 (16) | 0.5424 (8) | 0.027 (3)* | 0.2 |
H1C | 0.165905 | 0.609116 | 0.590781 | 0.033* | 0.2 |
C2C | 0.274 (2) | 0.4121 (16) | 0.5447 (8) | 0.018 (3)* | 0.2 |
H2C | 0.288262 | 0.344285 | 0.595466 | 0.022* | 0.2 |
N3C | 0.311 (3) | 0.3842 (15) | 0.4554 (8) | 0.022 (3)* | 0.2 |
H3C | 0.343391 | 0.292508 | 0.433545 | 0.026* | 0.2 |
C4C | 0.290 (2) | 0.5190 (15) | 0.4027 (8) | 0.027 (3)* | 0.2 |
H4C | 0.315575 | 0.527623 | 0.339451 | 0.032* | 0.2 |
C5C | 0.225 (3) | 0.6374 (14) | 0.4580 (10) | 0.021 (4)* | 0.2 |
H5C | 0.196349 | 0.742762 | 0.442819 | 0.025* | 0.2 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1 | 0.0685 (4) | 0.0304 (3) | 0.0240 (3) | −0.0146 (2) | 0.00466 (19) | −0.00231 (17) |
O1 | 0.1012 (12) | 0.0316 (7) | 0.0283 (7) | −0.0010 (7) | 0.0124 (7) | −0.0036 (5) |
O2 | 0.0860 (11) | 0.0316 (7) | 0.0394 (7) | −0.0218 (7) | 0.0148 (7) | −0.0052 (5) |
O3 | 0.0763 (9) | 0.0488 (8) | 0.0276 (6) | −0.0128 (7) | −0.0064 (6) | 0.0044 (5) |
Geometric parameters (Å, º) top
P1—O1 | 1.5190 (13) | N1B—H1B | 0.8600 |
P1—O3 | 1.5234 (14) | C2B—N3B | 1.330 (3) |
P1—O2 | 1.5263 (14) | C2B—H2B | 0.9300 |
P1—P1i | 2.1831 (15) | N3B—C4B | 1.368 (3) |
O1—H1 | 0.8200 | N3B—H3B | 0.8600 |
O2—H2 | 0.8200 | C4B—C5B | 1.348 (3) |
O3—H3 | 0.8200 | C4B—H4B | 0.9300 |
N1A—C2A | 1.330 (2) | C5B—H5B | 0.9300 |
N1A—C5A | 1.370 (2) | N1C—C2C | 1.330 (3) |
N1A—H1A | 0.8600 | N1C—C5C | 1.371 (3) |
C2A—N3A | 1.330 (2) | N1C—H1C | 0.8600 |
C2A—H2A | 0.9300 | C2C—N3C | 1.330 (3) |
N3A—C4A | 1.369 (2) | C2C—H2C | 0.9300 |
N3A—H3A | 0.8600 | N3C—C4C | 1.368 (3) |
C4A—C5A | 1.349 (2) | N3C—H3C | 0.8600 |
C4A—H4A | 0.9300 | C4C—C5C | 1.348 (3) |
C5A—H5A | 0.9300 | C4C—H4C | 0.9300 |
N1B—C2B | 1.329 (3) | C5C—H5C | 0.9300 |
N1B—C5B | 1.370 (3) | | |
| | | |
O1—P1—O3 | 111.37 (9) | N1B—C2B—N3B | 102.3 (9) |
O1—P1—O2 | 111.87 (8) | N1B—C2B—H2B | 128.8 |
O3—P1—O2 | 111.58 (8) | N3B—C2B—H2B | 128.8 |
O1—P1—P1i | 107.74 (7) | C2B—N3B—C4B | 112.2 (10) |
O3—P1—P1i | 106.87 (6) | C2B—N3B—H3B | 123.9 |
O2—P1—P1i | 107.10 (8) | C4B—N3B—H3B | 123.9 |
P1—O1—H1 | 109.5 | C5B—C4B—N3B | 106.8 (10) |
P1—O2—H2 | 109.5 | C5B—C4B—H4B | 126.6 |
P1—O3—H3 | 109.5 | N3B—C4B—H4B | 126.6 |
C2A—N1A—C5A | 117.1 (12) | C4B—C5B—N1B | 103.2 (10) |
C2A—N1A—H1A | 121.5 | C4B—C5B—H5B | 128.4 |
C5A—N1A—H1A | 121.5 | N1B—C5B—H5B | 128.4 |
N1A—C2A—N3A | 101.1 (12) | C2C—N1C—C5C | 115.7 (12) |
N1A—C2A—H2A | 129.5 | C2C—N1C—H1C | 122.2 |
N3A—C2A—H2A | 129.5 | C5C—N1C—H1C | 122.2 |
C2A—N3A—C4A | 111.9 (13) | N1C—C2C—N3C | 101.8 (11) |
C2A—N3A—H3A | 124.1 | N1C—C2C—H2C | 129.1 |
C4A—N3A—H3A | 124.1 | N3C—C2C—H2C | 129.1 |
C5A—C4A—N3A | 108.9 (13) | C2C—N3C—C4C | 111.8 (9) |
C5A—C4A—H4A | 125.5 | C2C—N3C—H3C | 124.1 |
N3A—C4A—H4A | 125.5 | C4C—N3C—H3C | 124.1 |
C4A—C5A—N1A | 100.9 (12) | C5C—C4C—N3C | 108.3 (9) |
C4A—C5A—H5A | 129.5 | C5C—C4C—H4C | 125.9 |
N1A—C5A—H5A | 129.5 | N3C—C4C—H4C | 125.9 |
C2B—N1B—C5B | 114.4 (9) | C4C—C5C—N1C | 102.0 (10) |
C2B—N1B—H1B | 122.8 | C4C—C5C—H5C | 129.0 |
C5B—N1B—H1B | 122.8 | N1C—C5C—H5C | 129.0 |
| | | |
C5A—N1A—C2A—N3A | 4 (3) | C2C—N3C—C4C—C5C | −4 (2) |
N1A—C2A—N3A—C4A | −4 (4) | N3C—C4C—C5C—N1C | 0.1 (18) |
C2A—N3A—C4A—C5A | 3 (4) | C2C—N1C—C5C—C4C | 4.1 (19) |
N3A—C4A—C5A—N1A | −1 (3) | O1—P1—P1i—O1i | 50.06 (11) |
C2A—N1A—C5A—C4A | −2 (3) | O2—P1—P1i—O1i | −70.45 (7) |
C5B—N1B—C2B—N3B | −3.9 (16) | O3—P1—P1i—O1i | 169.85 (8) |
N1B—C2B—N3B—C4B | −3.1 (14) | O1—P1—P1i—O2i | −70.45 (7) |
C2B—N3B—C4B—C5B | 8.9 (18) | O2—P1—P1i—O2i | 169.04 (10) |
N3B—C4B—C5B—N1B | −10.3 (19) | O3—P1—P1i—O2i | 49.34 (8) |
C2B—N1B—C5B—C4B | 9 (2) | O1—P1—P1i—O3i | 169.85 (8) |
C5C—N1C—C2C—N3C | −6.4 (19) | O2—P1—P1i—O3i | 49.34 (8) |
N1C—C2C—N3C—C4C | 6.2 (18) | O3—P1—P1i—O3i | −70.36 (12) |
Symmetry code: (i) −x+3/2, −y, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O1ii | 0.82 | 1.72 | 2.488 (3) | 156 |
O2—H2···O2iii | 0.82 | 1.75 | 2.513 (2) | 155 |
O3—H3···O3iv | 0.82 | 1.73 | 2.503 (3) | 157 |
N1A—H1A···O1 | 0.86 | 2.32 | 3.034 (17) | 141 |
N3A—H3A···O1v | 0.86 | 2.44 | 3.19 (2) | 147 |
N1B—H1B···O2ii | 0.86 | 2.36 | 3.162 (11) | 156 |
N3B—H3B···O3vi | 0.86 | 2.19 | 2.900 (9) | 140 |
N1C—H1C···O2vii | 0.86 | 2.39 | 3.186 (13) | 155 |
N3C—H3C···O1 | 0.86 | 2.24 | 3.036 (12) | 154 |
C2A—H2A···O3vi | 0.93 | 2.26 | 2.94 (2) | 130 |
C4A—H4A···O3viii | 0.93 | 2.61 | 3.32 (2) | 134 |
C5A—H5A···O2ii | 0.93 | 2.09 | 3.013 (14) | 171 |
C2B—H2B···O1 | 0.93 | 2.53 | 3.145 (9) | 124 |
C4B—H4B···O1v | 0.93 | 2.17 | 3.044 (12) | 156 |
C5B—H5B···O3viii | 0.93 | 2.38 | 3.231 (13) | 151 |
C2C—H2C···O2ii | 0.93 | 2.23 | 3.064 (14) | 149 |
C4C—H4C···O3iv | 0.93 | 2.26 | 2.957 (14) | 131 |
C5C—H5C···O1v | 0.93 | 2.20 | 3.024 (15) | 147 |
Symmetry codes: (ii) −x+1, −y, −z+1; (iii) x, −y−1/2, −z+1/2; (iv) x, −y+1/2, −z+1/2; (v) −x+1/2, −y+1, z; (vi) −x+1/2, y+1/2, −z+1/2; (vii) x−1/2, y+1, −z+1; (viii) −x+1, y+1/2, z+1/2. |
Crystal data top
(C3H5N2)·(H3O6P2) | F(000) = 944 |
Mr = 230.05 | Dx = 1.860 Mg m−3 |
Monoclinic, P21/n11 | Mo Kα radiation, λ = 0.71073 Å |
a = 13.673 (2) Å | Cell parameters from 6843 reflections |
b = 8.396 (2) Å | θ = 2.8–29.3° |
c = 14.317 (3) Å | µ = 0.53 mm−1 |
β = 90° | T = 100 K |
V = 1643.5 (6) Å3 | Plate, colourless |
Z = 8 | 0.35 × 0.21 × 0.10 mm |
Data collection top
Agilent Technologies, Xcalibur R diffractometer | 4008 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 3358 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
Detector resolution: 10.6249 pixels mm-1 | θmax = 29.5°, θmin = 2.8° |
ω scans | h = −18→17 |
Absorption correction: analytical CrysAlisPro 1.171.39.46 (Rigaku Oxford Diffraction, 2018)
Analytical numeric absorption correction using a multifaceted crystal
model based on expressions derived by R.C. Clark & J.S. Reid.
(Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897)
Empirical absorption correction using spherical harmonics,
implemented in SCALE3 ABSPACK scaling algorithm. | k = −11→10 |
Tmin = 0.868, Tmax = 0.952 | l = −18→18 |
14185 measured reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.083 | w = 1/[σ2(Fo2) + (0.0355P)2 + 1.1991P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
4008 reflections | Δρmax = 0.43 e Å−3 |
245 parameters | Δρmin = −0.47 e Å−3 |
5 restraints | Extinction correction: SHELXL-2014/7 (Sheldrick 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: dual | Extinction coefficient: 0.0049 (3) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
P1A | 0.28745 (3) | 0.01736 (5) | 0.33674 (3) | 0.00790 (11) | |
P2A | 0.44733 (3) | 0.01986 (5) | 0.33894 (3) | 0.00804 (11) | |
O1A | 0.25123 (9) | 0.09237 (13) | 0.42644 (8) | 0.0109 (3) | |
O2A | 0.25705 (9) | 0.10470 (14) | 0.24807 (8) | 0.0108 (3) | |
O3A | 0.25329 (9) | −0.15954 (13) | 0.33107 (9) | 0.0120 (3) | |
H3A | 0.2625 | −0.2064 | 0.2797 | 0.066 (10)* | |
O4A | 0.47699 (9) | 0.19232 (13) | 0.33225 (8) | 0.0107 (3) | |
O5A | 0.48196 (9) | −0.06658 (14) | 0.42585 (8) | 0.0122 (3) | |
H5A | 0.5000 | 0.0000 | 0.5000 | 0.082 (16)* | |
O6A | 0.48091 (9) | −0.07278 (14) | 0.24998 (8) | 0.0117 (3) | |
H6A | 0.4847 | −0.1724 | 0.2537 | 0.069 (10)* | |
P1B | 0.31216 (3) | 0.50861 (5) | 0.16782 (3) | 0.00846 (11) | |
P2B | 0.47219 (3) | 0.51986 (5) | 0.16949 (3) | 0.00814 (11) | |
O1B | 0.27275 (9) | 0.67343 (13) | 0.18213 (8) | 0.0114 (3) | |
O2B | 0.28276 (9) | 0.39351 (14) | 0.24509 (8) | 0.0121 (3) | |
H2B | 0.275 (3) | 0.263 (4) | 0.242 (2) | 0.079 (11)* | |
O3B | 0.28407 (9) | 0.43198 (14) | 0.07219 (8) | 0.0124 (3) | |
H3B | 0.2763 | 0.4955 | 0.0279 | 0.057 (9)* | |
O4B | 0.50262 (9) | 0.62797 (14) | 0.24819 (8) | 0.0114 (3) | |
O5B | 0.50603 (9) | 0.57711 (14) | 0.07341 (8) | 0.0113 (3) | |
H5B | 0.5088 | 0.5162 | 0.0266 | 0.017* | 0.5 |
O6B | 0.50977 (9) | 0.34540 (14) | 0.18031 (9) | 0.0117 (3) | |
H6B | 0.5014 | 0.3034 | 0.2327 | 0.074 (11)* | |
N1A | 0.15762 (11) | 0.38999 (17) | 0.45119 (10) | 0.0123 (3) | |
H1NA | 0.1801 | 0.2971 | 0.4318 | 0.015* | |
N3A | 0.10820 (11) | 0.63204 (17) | 0.45115 (11) | 0.0125 (3) | |
H3NA | 0.0923 | 0.7277 | 0.4318 | 0.015* | |
C2A | 0.14201 (13) | 0.5153 (2) | 0.39745 (13) | 0.0136 (4) | |
H2AA | 0.1531 | 0.5203 | 0.3320 | 0.016* | |
C4A | 0.10181 (13) | 0.5810 (2) | 0.54167 (12) | 0.0121 (4) | |
H4A | 0.0797 | 0.6414 | 0.5940 | 0.015* | |
C5A | 0.13314 (13) | 0.4282 (2) | 0.54205 (13) | 0.0127 (4) | |
H5AA | 0.1374 | 0.3604 | 0.5946 | 0.015* | |
N1B | 0.40281 (11) | 0.40332 (17) | 0.46499 (10) | 0.0119 (3) | |
H1NB | 0.4246 | 0.3331 | 0.4239 | 0.014* | |
N3B | 0.35492 (11) | 0.50904 (17) | 0.59381 (11) | 0.0137 (3) | |
H3NB | 0.3394 | 0.5212 | 0.6531 | 0.016* | |
C2B | 0.38577 (13) | 0.3749 (2) | 0.55451 (13) | 0.0141 (4) | |
H2BA | 0.3942 | 0.2758 | 0.5850 | 0.017* | |
C4B | 0.35081 (13) | 0.6264 (2) | 0.52792 (13) | 0.0127 (4) | |
H4B | 0.3306 | 0.7335 | 0.5376 | 0.015* | |
C5B | 0.38112 (13) | 0.5599 (2) | 0.44651 (13) | 0.0128 (4) | |
H5BA | 0.3864 | 0.6114 | 0.3879 | 0.015* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1A | 0.0103 (2) | 0.0068 (2) | 0.0067 (2) | −0.00010 (16) | 0.00073 (17) | 0.00033 (14) |
P2A | 0.0102 (2) | 0.0067 (2) | 0.0072 (2) | 0.00057 (15) | 0.00022 (17) | 0.00017 (15) |
O1A | 0.0137 (6) | 0.0100 (6) | 0.0091 (6) | 0.0018 (5) | 0.0026 (5) | −0.0007 (4) |
O2A | 0.0140 (7) | 0.0102 (6) | 0.0082 (6) | −0.0020 (5) | −0.0019 (5) | 0.0019 (4) |
O3A | 0.0164 (7) | 0.0081 (6) | 0.0117 (6) | −0.0023 (5) | 0.0024 (5) | 0.0000 (4) |
O4A | 0.0134 (6) | 0.0081 (6) | 0.0107 (6) | −0.0011 (5) | 0.0003 (5) | −0.0007 (4) |
O5A | 0.0172 (7) | 0.0104 (6) | 0.0091 (6) | 0.0022 (5) | −0.0032 (5) | 0.0002 (4) |
O6A | 0.0167 (7) | 0.0088 (6) | 0.0096 (6) | 0.0014 (5) | 0.0022 (5) | −0.0014 (4) |
P1B | 0.0107 (2) | 0.0068 (2) | 0.0079 (2) | −0.00058 (16) | 0.00009 (17) | −0.00017 (15) |
P2B | 0.0108 (2) | 0.0068 (2) | 0.0069 (2) | −0.00064 (16) | 0.00065 (17) | −0.00094 (15) |
O1B | 0.0145 (6) | 0.0083 (6) | 0.0114 (6) | 0.0014 (5) | −0.0005 (5) | −0.0002 (4) |
O2B | 0.0162 (7) | 0.0099 (6) | 0.0103 (6) | −0.0013 (5) | 0.0025 (5) | 0.0010 (4) |
O3B | 0.0186 (7) | 0.0095 (6) | 0.0089 (6) | −0.0018 (5) | −0.0030 (5) | −0.0005 (4) |
O4B | 0.0147 (6) | 0.0095 (6) | 0.0101 (6) | −0.0011 (5) | −0.0015 (5) | −0.0022 (4) |
O5B | 0.0165 (7) | 0.0096 (6) | 0.0078 (6) | −0.0029 (5) | 0.0023 (5) | −0.0001 (4) |
O6B | 0.0151 (7) | 0.0084 (6) | 0.0117 (6) | 0.0010 (5) | 0.0022 (5) | 0.0005 (5) |
N1A | 0.0116 (7) | 0.0094 (7) | 0.0160 (8) | 0.0021 (6) | −0.0008 (6) | −0.0032 (5) |
N3A | 0.0122 (8) | 0.0092 (7) | 0.0164 (8) | 0.0013 (6) | −0.0004 (6) | 0.0030 (5) |
C2A | 0.0112 (9) | 0.0177 (9) | 0.0119 (9) | 0.0002 (7) | 0.0005 (7) | 0.0000 (7) |
C4A | 0.0126 (9) | 0.0137 (8) | 0.0100 (9) | −0.0009 (7) | 0.0014 (7) | −0.0021 (6) |
C5A | 0.0126 (9) | 0.0136 (8) | 0.0119 (9) | −0.0007 (7) | −0.0020 (7) | 0.0029 (6) |
N1B | 0.0120 (8) | 0.0105 (7) | 0.0130 (8) | 0.0005 (6) | 0.0013 (6) | −0.0042 (5) |
N3B | 0.0160 (8) | 0.0161 (8) | 0.0089 (7) | 0.0000 (6) | 0.0030 (6) | −0.0014 (6) |
C2B | 0.0132 (9) | 0.0122 (8) | 0.0170 (9) | 0.0003 (7) | −0.0012 (7) | 0.0020 (7) |
C4B | 0.0121 (9) | 0.0101 (8) | 0.0159 (9) | 0.0012 (7) | −0.0014 (7) | −0.0008 (6) |
C5B | 0.0148 (9) | 0.0128 (8) | 0.0109 (9) | −0.0012 (7) | −0.0009 (7) | 0.0024 (6) |
Geometric parameters (Å, º) top
P1A—O1A | 1.5083 (12) | O6B—H6B | 0.8400 |
P1A—O2A | 1.5299 (13) | N1A—C2A | 1.327 (2) |
P1A—O3A | 1.5583 (12) | N1A—C5A | 1.378 (2) |
P1A—P2A | 2.1863 (7) | N1A—H1NA | 0.8800 |
P2A—O4A | 1.5077 (12) | N3A—C2A | 1.323 (2) |
P2A—O5A | 1.5222 (13) | N3A—C4A | 1.372 (2) |
P2A—O6A | 1.5551 (12) | N3A—H3NA | 0.8800 |
O2A—H2B | 1.35 (3) | C2A—H2AA | 0.9500 |
O3A—H3A | 0.8403 | C4A—C5A | 1.353 (2) |
O5A—H5A | 1.220 (2) | C4A—H4A | 0.9500 |
O6A—H6A | 0.8404 | C5A—H5AA | 0.9500 |
P1B—O1B | 1.4972 (12) | N1B—C2B | 1.327 (2) |
P1B—O2B | 1.5299 (13) | N1B—C5B | 1.376 (2) |
P1B—O3B | 1.5551 (12) | N1B—H1NB | 0.8800 |
P1B—P2B | 2.1902 (7) | N3B—C2B | 1.323 (2) |
P2B—O4B | 1.4987 (12) | N3B—C4B | 1.372 (2) |
P2B—O5B | 1.5331 (13) | N3B—H3NB | 0.8800 |
P2B—O6B | 1.5614 (13) | C2B—H2BA | 0.9500 |
O2B—H2B | 1.10 (3) | C4B—C5B | 1.352 (2) |
O3B—H3B | 0.8402 | C4B—H4B | 0.9500 |
O5B—H5B | 0.8400 | C5B—H5BA | 0.9500 |
| | | |
O1A—P1A—O2A | 114.69 (7) | P2B—O6B—H6B | 116.5 |
O1A—P1A—O3A | 109.61 (7) | C2A—N1A—C5A | 109.27 (15) |
O2A—P1A—O3A | 109.86 (7) | C2A—N1A—H1NA | 125.4 |
O1A—P1A—P2A | 108.19 (5) | C5A—N1A—H1NA | 125.4 |
O2A—P1A—P2A | 106.20 (5) | C2A—N3A—C4A | 109.56 (15) |
O3A—P1A—P2A | 108.03 (5) | C2A—N3A—H3NA | 125.2 |
O4A—P2A—O5A | 115.74 (7) | C4A—N3A—H3NA | 125.2 |
O4A—P2A—O6A | 109.96 (7) | N3A—C2A—N1A | 107.85 (16) |
O5A—P2A—O6A | 109.81 (7) | N3A—C2A—H2AA | 126.1 |
O4A—P2A—P1A | 106.09 (5) | N1A—C2A—H2AA | 126.1 |
O5A—P2A—P1A | 108.55 (6) | C5A—C4A—N3A | 106.77 (15) |
O6A—P2A—P1A | 106.19 (5) | C5A—C4A—H4A | 126.6 |
P1A—O2A—H2B | 118.9 (13) | N3A—C4A—H4A | 126.6 |
P1A—O3A—H3A | 116.0 | C4A—C5A—N1A | 106.55 (16) |
P2A—O5A—H5A | 123.79 (9) | C4A—C5A—H5AA | 126.7 |
P2A—O6A—H6A | 117.1 | N1A—C5A—H5AA | 126.7 |
O1B—P1B—O2B | 113.34 (7) | C2B—N1B—C5B | 109.23 (15) |
O1B—P1B—O3B | 113.91 (7) | C2B—N1B—H1NB | 125.4 |
O2B—P1B—O3B | 108.24 (7) | C5B—N1B—H1NB | 125.4 |
O1B—P1B—P2B | 108.56 (5) | C2B—N3B—C4B | 109.55 (15) |
O2B—P1B—P2B | 106.38 (5) | C2B—N3B—H3NB | 125.2 |
O3B—P1B—P2B | 105.89 (5) | C4B—N3B—H3NB | 125.2 |
O4B—P2B—O5B | 113.44 (7) | N3B—C2B—N1B | 107.83 (16) |
O4B—P2B—O6B | 113.32 (7) | N3B—C2B—H2BA | 126.1 |
O5B—P2B—O6B | 107.01 (7) | N1B—C2B—H2BA | 126.1 |
O4B—P2B—P1B | 108.13 (5) | C5B—C4B—N3B | 106.70 (15) |
O5B—P2B—P1B | 107.79 (5) | C5B—C4B—H4B | 126.7 |
O6B—P2B—P1B | 106.82 (5) | N3B—C4B—H4B | 126.7 |
P1B—O2B—H2B | 129.2 (16) | C4B—C5B—N1B | 106.69 (16) |
P1B—O3B—H3B | 115.9 | C4B—C5B—H5BA | 126.7 |
P2B—O5B—H5B | 122.4 | N1B—C5B—H5BA | 126.7 |
| | | |
O1A—P1A—P2A—O4A | −68.32 (7) | O3B—P1B—P2B—O5B | 43.13 (7) |
O2A—P1A—P2A—O4A | 55.28 (7) | O1B—P1B—P2B—O6B | 165.73 (7) |
O3A—P1A—P2A—O4A | 173.10 (7) | O2B—P1B—P2B—O6B | 43.43 (7) |
O1A—P1A—P2A—O5A | 56.68 (7) | O3B—P1B—P2B—O6B | −71.58 (7) |
O2A—P1A—P2A—O5A | −179.72 (7) | C4A—N3A—C2A—N1A | 0.0 (2) |
O3A—P1A—P2A—O5A | −61.90 (7) | C5A—N1A—C2A—N3A | −0.1 (2) |
O1A—P1A—P2A—O6A | 174.70 (7) | C2A—N3A—C4A—C5A | 0.1 (2) |
O2A—P1A—P2A—O6A | −61.70 (7) | N3A—C4A—C5A—N1A | −0.2 (2) |
O3A—P1A—P2A—O6A | 56.11 (7) | C2A—N1A—C5A—C4A | 0.2 (2) |
O1B—P1B—P2B—O4B | 43.44 (8) | C4B—N3B—C2B—N1B | 0.7 (2) |
O2B—P1B—P2B—O4B | −78.85 (8) | C5B—N1B—C2B—N3B | −0.7 (2) |
O3B—P1B—P2B—O4B | 166.13 (7) | C2B—N3B—C4B—C5B | −0.5 (2) |
O1B—P1B—P2B—O5B | −79.56 (7) | N3B—C4B—C5B—N1B | 0.1 (2) |
O2B—P1B—P2B—O5B | 158.14 (7) | C2B—N1B—C5B—C4B | 0.4 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3A—H3A···O1Bi | 0.84 | 1.72 | 2.5544 (18) | 171 |
O5A—H5A···O5Aii | 1.22 (1) | 1.22 (1) | 2.440 (2) | 180 |
O6A—H6A···O4Bi | 0.84 | 1.69 | 2.5298 (18) | 172 |
O2B—H2B···O2A | 1.10 (3) | 1.35 (3) | 2.4510 (18) | 172 (3) |
O3B—H3B···O1Aiii | 0.84 | 1.71 | 2.5410 (19) | 168 |
O5B—H5B···O5Biv | 0.84 | 1.64 | 2.463 (2) | 167 |
O6B—H6B···O4A | 0.84 | 1.74 | 2.5769 (19) | 172 |
N1A—H1NA···O1A | 0.88 | 1.98 | 2.8267 (19) | 162 |
N3A—H3NA···O5Bv | 0.88 | 2.02 | 2.8382 (19) | 154 |
N1B—H1NB···O4A | 0.88 | 1.90 | 2.7770 (19) | 176 |
N3B—H3NB···O2Avi | 0.88 | 2.02 | 2.7985 (19) | 148 |
C2A—H2AA···O2B | 0.95 | 2.41 | 3.076 (2) | 127 |
C4A—H4A···O6Bvi | 0.95 | 2.43 | 3.333 (2) | 158 |
C5A—H5AA···O1Bvii | 0.95 | 2.36 | 3.215 (2) | 149 |
C2B—H2BA···O5Aii | 0.95 | 2.44 | 3.173 (2) | 133 |
C4B—H4B···O3Bvi | 0.95 | 2.34 | 3.218 (2) | 154 |
C5B—H5BA···O4B | 0.95 | 2.56 | 3.344 (2) | 140 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y, −z+1; (iii) −x+1/2, y+1/2, z−1/2; (iv) −x+1, −y+1, −z; (v) x−1/2, −y+3/2, −z+1/2; (vi) −x+1/2, y+1/2, z+1/2; (vii) −x+1/2, y−1/2, z+1/2. |
Crystal data top
2(C3H5N2)·(H2O6P2) | Dx = 1.593 Mg m−3 |
Mr = 298.14 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, P43212 | Cell parameters from 5341 reflections |
a = 8.966 (2) Å | θ = 2.6–28.4° |
c = 15.462 (4) Å | µ = 0.38 mm−1 |
V = 1243.0 (6) Å3 | T = 110 K |
Z = 4 | Column, colourless |
F(000) = 616 | 0.42 × 0.06 × 0.05 mm |
Data collection top
Agilent Technologies, Xcalibur R diffractometer | 1550 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 1444 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.037 |
Detector resolution: 10.3456 pixels mm-1 | θmax = 28.8°, θmin = 2.6° |
ω scans | h = −11→11 |
Absorption correction: analytical CrysAlisPro 1.171.39.46 (Rigaku Oxford Diffraction, 2018)
Analytical numeric absorption correction using a multifaceted crystal
model based on expressions derived by R.C. Clark & J.S. Reid.
(Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897)
Empirical absorption correction using spherical harmonics,
implemented in SCALE3 ABSPACK scaling algorithm. | k = −11→10 |
Tmin = 0.867, Tmax = 0.983 | l = −20→19 |
13584 measured reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.065 | w = 1/[σ2(Fo2) + (0.0313P)2 + 0.3895P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max = 0.001 |
1550 reflections | Δρmax = 0.30 e Å−3 |
94 parameters | Δρmin = −0.30 e Å−3 |
0 restraints | Absolute structure: Flack x determined using 519 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons, Flack and Wagner, Acta Cryst. B69 (2013) 249-259). |
Primary atom site location: dual | Absolute structure parameter: 0.03 (4) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
P1 | 0.31970 (6) | 0.24790 (6) | 0.56384 (3) | 0.01203 (14) | |
O1 | 0.29901 (18) | 0.08245 (17) | 0.57054 (11) | 0.0214 (4) | |
O2 | 0.47546 (16) | 0.30850 (17) | 0.57853 (10) | 0.0161 (3) | |
O3 | 0.21351 (18) | 0.33388 (19) | 0.62805 (10) | 0.0189 (4) | |
H3 | 0.131 (4) | 0.288 (4) | 0.635 (2) | 0.054 (11)* | |
N1 | 0.4969 (2) | 0.6045 (2) | 0.61837 (13) | 0.0187 (4) | |
H1N | 0.493 (4) | 0.518 (4) | 0.606 (2) | 0.038 (9)* | |
N3 | 0.4378 (2) | 0.8365 (2) | 0.61309 (13) | 0.0189 (4) | |
H3N | 0.401 (4) | 0.911 (4) | 0.599 (2) | 0.046 (10)* | |
C2 | 0.4252 (3) | 0.7072 (2) | 0.57305 (15) | 0.0195 (5) | |
H2 | 0.3733 | 0.6906 | 0.5204 | 0.023* | |
C4 | 0.5189 (2) | 0.8159 (3) | 0.68759 (16) | 0.0196 (5) | |
H4 | 0.5442 | 0.8902 | 0.7288 | 0.024* | |
C5 | 0.5557 (2) | 0.6700 (2) | 0.69101 (15) | 0.0187 (4) | |
H5 | 0.6115 | 0.6220 | 0.7352 | 0.022* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1 | 0.0132 (3) | 0.0100 (3) | 0.0128 (2) | −0.0007 (2) | −0.0022 (2) | 0.0010 (2) |
O1 | 0.0240 (9) | 0.0120 (7) | 0.0281 (9) | −0.0015 (6) | −0.0086 (7) | 0.0037 (7) |
O2 | 0.0146 (8) | 0.0151 (7) | 0.0188 (8) | −0.0008 (6) | −0.0040 (6) | 0.0010 (6) |
O3 | 0.0188 (8) | 0.0208 (9) | 0.0170 (8) | −0.0051 (7) | 0.0040 (6) | −0.0033 (6) |
N1 | 0.0191 (10) | 0.0135 (10) | 0.0236 (10) | 0.0007 (7) | 0.0005 (8) | −0.0021 (8) |
N3 | 0.0217 (10) | 0.0127 (10) | 0.0225 (10) | 0.0030 (8) | −0.0044 (8) | 0.0001 (8) |
C2 | 0.0203 (11) | 0.0181 (11) | 0.0200 (11) | 0.0009 (8) | −0.0032 (9) | −0.0025 (8) |
C4 | 0.0201 (11) | 0.0172 (11) | 0.0216 (11) | 0.0001 (9) | −0.0037 (10) | −0.0027 (10) |
C5 | 0.0181 (10) | 0.0177 (11) | 0.0201 (10) | −0.0006 (9) | −0.0023 (9) | 0.0003 (10) |
Geometric parameters (Å, º) top
P1—O1 | 1.4986 (17) | N3—C2 | 1.319 (3) |
P1—O2 | 1.5157 (16) | N3—C4 | 1.375 (3) |
P1—O3 | 1.5768 (17) | N3—H3N | 0.77 (4) |
P1—P1i | 2.1741 (11) | C2—H2 | 0.9500 |
O3—H3 | 0.86 (4) | C4—C5 | 1.349 (3) |
N1—C2 | 1.324 (3) | C4—H4 | 0.9500 |
N1—C5 | 1.373 (3) | C5—H5 | 0.9500 |
N1—H1N | 0.80 (4) | | |
| | | |
O1—P1—O2 | 117.29 (9) | C2—N3—H3N | 126 (2) |
O1—P1—O3 | 111.45 (10) | C4—N3—H3N | 125 (2) |
O2—P1—O3 | 106.66 (9) | N3—C2—N1 | 108.8 (2) |
O1—P1—P1i | 108.62 (7) | N3—C2—H2 | 125.6 |
O2—P1—P1i | 107.62 (6) | N1—C2—H2 | 125.6 |
O3—P1—P1i | 104.37 (7) | C5—C4—N3 | 107.0 (2) |
P1—O3—H3 | 112 (2) | C5—C4—H4 | 126.5 |
C2—N1—C5 | 108.7 (2) | N3—C4—H4 | 126.5 |
C2—N1—H1N | 122 (2) | C4—C5—N1 | 106.8 (2) |
C5—N1—H1N | 129 (2) | C4—C5—H5 | 126.6 |
C2—N3—C4 | 108.7 (2) | N1—C5—H5 | 126.6 |
| | | |
C4—N3—C2—N1 | −0.8 (3) | O3—P1—P1i—O1i | −51.39 (9) |
C5—N1—C2—N3 | 1.0 (3) | O1—P1—P1i—O2i | −164.46 (9) |
C2—N3—C4—C5 | 0.4 (3) | O2—P1—P1i—O2i | −36.54 (13) |
N3—C4—C5—N1 | 0.2 (3) | O3—P1—P1i—O2i | 76.54 (9) |
C2—N1—C5—C4 | −0.7 (3) | O1—P1—P1i—O3i | −51.39 (10) |
O1—P1—P1i—O1i | 67.61 (15) | O2—P1—P1i—O3i | 76.54 (9) |
O2—P1—P1i—O1i | −164.46 (9) | O3—P1—P1i—O3i | −170.38 (13) |
Symmetry code: (i) y, x, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2ii | 0.86 (4) | 1.73 (4) | 2.576 (2) | 169 (4) |
N1—H1N···O2 | 0.80 (4) | 1.93 (4) | 2.731 (3) | 178 (3) |
N3—H3N···O1iii | 0.77 (4) | 1.84 (4) | 2.616 (3) | 175 (4) |
C2—H2···O2i | 0.95 | 2.53 | 3.302 (3) | 139 |
Symmetry codes: (i) y, x, −z+1; (ii) x−1/2, −y+1/2, −z+5/4; (iii) x, y+1, z. |
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