Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807038238/ci2432sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807038238/ci2432Isup2.hkl |
CCDC reference: 662408
Air-dried roots of A. monophylla (6.0 kg) were ground and extracted with methylene chloride (2 × 20 l) for 7 d at room temperature. The yellow viscous residue (52.5 g) obtained after evaporation of the solvent was subjected to quick column chromatography over silica gel using solvents of increasing polarity from n-hexane through EtOAc. The eluents were separated into 18 fractions (F1—F18) on the basis of TLC analysis. Fraction F6 (1.2 g) was further separated by quick column chromatography (QCC) with a gradient of acetone–hexane to afford eight subfractions (6 A-6H). Fraction 6 F was further purified by column chromatography (CC) eluting with 20% acetone-hexane to give two subfractions (6 F A and 6FB). Fraction 6 F A was recrystallized from acetone to yield brown single crystals of the title compound after several days (m.p. 468–469 K).
Hydroxyl H atoms were located in a difference map and isotropically refined. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H distances in the range 0.93–0.97 Å. The Uiso values were constrained to be 1.5Ueq of the carrier atom for methyl H atoms and 1.2Ueq for the remaining H atoms. A rotating group model was used for the methyl groups.
Atalantia monophylla Corrêa is a mangrove plant, distributed in South-East Asia and known locally in Thai as Manao Phi. This plant has been used in folk medicine for several purposes such as the treatment of dysentery, chronic rheumatism and paralysis in India (Basa, 1975). Acridone alkaloids had been isolated from the petroleum ether extract of the root bark of this plant (Basu & Basa, 1972). In our continuing interest on the chemical constituents of Thai mangrove plants, we have examined the roots of A. monophylla collected from Trang Province in the southern part of Thailand. The title compound was isolated from the methylene chloride extract. It has shown several biological activities such as inhibition of EBV-EA induction (Itoigawa et al., 2003), antiviral (Kawaii et al., 1999a) and antiproliferative properties (Kawaii et al., 1999b).
The title molecule is chiral, but crystallized in the centrosymmetric space group P1. This indicates that the crude extract from which the compound was obtained is a racemic mixture and that the compound is a non-enzymatic product (Chantrapromma, Boonnak & Fun, 2005; Chantrapromma, Boonnak, Fun, Anjum et al., 2005; Fun et al., 2006; Kosela et al., 1999; Pancharoen et al., 1984).
The title molecule (Fig. 1) has a four-fused rings (A, B, C and D). The pyridine ring (B) is in an envelope conformation, with puckering parameters Q = 0.157 (1) Å, θ = 102.3 (4)° and φ = 170.5 (5)° (Cremer & Pople, 1975), atom N1 having the maximum deviation of 0.102 (1) Å. The chromene ring (D) adopts a screw-boat conformation, with the C14 and O4 atoms deviating from the ring mean plane by 0.276 (11) and -0.238 (1) Å, respectively. The prenyl group (C20–C24) is in a (-)-anticlinal conformation (Fig. 1), as evidenced by the torsion angle C2—C1—C20—C21 of -104.52 (13)°. The dihedral angle between the mean plane of the prenyl unit and the benzene ring C is 86.30 (7)°. The two methyl groups are axially and equatorially attached to the ring D at atom C14. The two hydroxyl groups are coplanar with the attached rings.
The bond lengths and angles in the title compound are within normal ranges (Allen et al., 1987).
Intramolecular O1—H1O1···O2 hydrogen bond generates an S(6) ring motif (Bernstein et al., 1995). The molecules are linked into a chain along the b axis by O3—H1O3···O1 hydrogen bonds (Fig. 2 and Table 1). These chains are interconnected into molecular sheets by weak C6—H6A···O2 hydrogen bonds (Table 1). In addition, the molecular packing is stabilized by C—H···π interactions involving the ring A (centroid Cg1).
For the biological activities of acridone alkaloids, see: Basa (1975); Basu & Basa (1972); Itoigawa et al. (2003); Kawaii et al. (1999a, 1999b). For hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987). For ring conformations, see: Cremer & Pople (1975). For related structures of non-enzymatic products, see: Chantrapromma, Boonnak & Fun (2005); Chantrapromma, Boonnak, Fun et al. (2005); Fun et al. (2006); Kosela et al. (1999); Pancharoen et al. (1984).
Data collection: APEX2 (Bruker, 2005); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 1998); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
C24H25NO4 | Z = 2 |
Mr = 391.45 | F(000) = 416 |
Triclinic, P1 | Dx = 1.343 Mg m−3 |
Hall symbol: -P 1 | Melting point = 468–469 K |
a = 9.1387 (1) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 9.7188 (1) Å | Cell parameters from 5637 reflections |
c = 11.7006 (2) Å | θ = 2.1–30.0° |
α = 90.796 (1)° | µ = 0.09 mm−1 |
β = 108.274 (1)° | T = 100 K |
γ = 100.432 (1)° | Block, brown |
V = 967.71 (2) Å3 | 0.20 × 0.17 × 0.13 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 5637 independent reflections |
Radiation source: fine-focus sealed tube | 4346 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
Detector resolution: 8.33 pixels mm-1 | θmax = 30.0°, θmin = 2.1° |
ω scans | h = −12→12 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −13→13 |
Tmin = 0.982, Tmax = 0.989 | l = −16→16 |
27568 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.129 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.063P)2 + 0.2437P] where P = (Fo2 + 2Fc2)/3 |
5637 reflections | (Δ/σ)max = 0.001 |
275 parameters | Δρmax = 0.47 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C24H25NO4 | γ = 100.432 (1)° |
Mr = 391.45 | V = 967.71 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.1387 (1) Å | Mo Kα radiation |
b = 9.7188 (1) Å | µ = 0.09 mm−1 |
c = 11.7006 (2) Å | T = 100 K |
α = 90.796 (1)° | 0.20 × 0.17 × 0.13 mm |
β = 108.274 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 5637 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4346 reflections with I > 2σ(I) |
Tmin = 0.982, Tmax = 0.989 | Rint = 0.039 |
27568 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.129 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.47 e Å−3 |
5637 reflections | Δρmin = −0.29 e Å−3 |
275 parameters |
Experimental. The low-temparture data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.61622 (11) | 0.27676 (9) | 0.32200 (8) | 0.01883 (19) | |
H1O1 | 0.613 (3) | 0.222 (2) | 0.250 (2) | 0.067 (7)* | |
O2 | 0.61815 (11) | 0.09885 (9) | 0.16858 (8) | 0.02066 (19) | |
O3 | 0.75404 (12) | −0.44307 (10) | 0.37072 (8) | 0.0228 (2) | |
H1O3 | 0.712 (2) | −0.532 (2) | 0.3441 (18) | 0.049 (6)* | |
O4 | 0.70875 (10) | 0.15820 (9) | 0.72458 (7) | 0.01672 (18) | |
N1 | 0.76273 (12) | −0.16662 (10) | 0.43264 (8) | 0.0149 (2) | |
C1 | 0.66453 (13) | 0.22153 (12) | 0.52648 (10) | 0.0157 (2) | |
C2 | 0.65150 (13) | 0.18472 (12) | 0.40837 (10) | 0.0152 (2) | |
C3 | 0.67677 (13) | 0.05172 (12) | 0.37412 (10) | 0.0147 (2) | |
C4 | 0.65261 (14) | 0.01412 (12) | 0.24907 (10) | 0.0157 (2) | |
C5 | 0.66192 (13) | −0.12935 (12) | 0.21856 (10) | 0.0160 (2) | |
C6 | 0.61480 (14) | −0.17997 (13) | 0.09659 (11) | 0.0181 (2) | |
H6A | 0.5803 | −0.1215 | 0.0357 | 0.022* | |
C7 | 0.61999 (14) | −0.31638 (13) | 0.06789 (11) | 0.0198 (2) | |
H7A | 0.5902 | −0.3499 | −0.0126 | 0.024* | |
C8 | 0.66982 (14) | −0.40457 (13) | 0.15928 (11) | 0.0190 (2) | |
H8A | 0.6731 | −0.4965 | 0.1389 | 0.023* | |
C9 | 0.71431 (14) | −0.35751 (12) | 0.27954 (11) | 0.0174 (2) | |
C10 | 0.71450 (13) | −0.21600 (12) | 0.31109 (10) | 0.0151 (2) | |
C11 | 0.72382 (13) | −0.04215 (12) | 0.46307 (10) | 0.0147 (2) | |
C12 | 0.73386 (13) | −0.00910 (12) | 0.58322 (10) | 0.0152 (2) | |
C13 | 0.70556 (13) | 0.12269 (12) | 0.61097 (10) | 0.0153 (2) | |
C14 | 0.80949 (14) | 0.09311 (13) | 0.82384 (10) | 0.0172 (2) | |
C15 | 0.77746 (15) | −0.06229 (13) | 0.79078 (11) | 0.0190 (2) | |
H15A | 0.7793 | −0.1255 | 0.8499 | 0.023* | |
C16 | 0.74650 (14) | −0.10879 (12) | 0.67641 (11) | 0.0179 (2) | |
H16A | 0.7330 | −0.2041 | 0.6560 | 0.021* | |
C17 | 0.76250 (15) | 0.12599 (14) | 0.93288 (11) | 0.0210 (3) | |
H17A | 0.6562 | 0.0791 | 0.9205 | 0.032* | |
H17B | 0.7703 | 0.2254 | 0.9439 | 0.032* | |
H17C | 0.8312 | 0.0943 | 1.0033 | 0.032* | |
C18 | 0.97943 (15) | 0.16100 (15) | 0.84190 (12) | 0.0242 (3) | |
H18A | 1.0047 | 0.1423 | 0.7702 | 0.036* | |
H18B | 1.0473 | 0.1230 | 0.9089 | 0.036* | |
H18C | 0.9936 | 0.2605 | 0.8580 | 0.036* | |
C19 | 0.90568 (14) | −0.20744 (13) | 0.51514 (11) | 0.0196 (2) | |
H19A | 0.9626 | −0.1316 | 0.5749 | 0.029* | |
H19B | 0.9711 | −0.2282 | 0.4697 | 0.029* | |
H19C | 0.8758 | −0.2890 | 0.5542 | 0.029* | |
C20 | 0.64205 (14) | 0.36238 (12) | 0.56688 (11) | 0.0172 (2) | |
H20A | 0.5895 | 0.4083 | 0.4970 | 0.021* | |
H20B | 0.5762 | 0.3489 | 0.6182 | 0.021* | |
C21 | 0.79840 (14) | 0.45383 (12) | 0.63520 (11) | 0.0183 (2) | |
H21A | 0.8747 | 0.4641 | 0.5972 | 0.022* | |
C22 | 0.83977 (16) | 0.52167 (13) | 0.74370 (11) | 0.0216 (3) | |
C23 | 0.73177 (19) | 0.51901 (16) | 0.81818 (13) | 0.0311 (3) | |
H23A | 0.6530 | 0.4346 | 0.7960 | 0.047* | |
H23B | 0.6821 | 0.5990 | 0.8039 | 0.047* | |
H23C | 0.7913 | 0.5217 | 0.9022 | 0.047* | |
C24 | 1.00179 (17) | 0.60931 (15) | 0.79955 (13) | 0.0293 (3) | |
H24A | 1.0620 | 0.6050 | 0.7460 | 0.044* | |
H24B | 1.0528 | 0.5740 | 0.8749 | 0.044* | |
H24C | 0.9939 | 0.7049 | 0.8134 | 0.044* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0264 (4) | 0.0139 (4) | 0.0152 (4) | 0.0049 (3) | 0.0045 (3) | 0.0019 (3) |
O2 | 0.0294 (5) | 0.0177 (4) | 0.0144 (4) | 0.0057 (3) | 0.0057 (3) | 0.0023 (3) |
O3 | 0.0355 (5) | 0.0129 (4) | 0.0186 (4) | 0.0038 (4) | 0.0072 (4) | 0.0010 (3) |
O4 | 0.0209 (4) | 0.0173 (4) | 0.0127 (4) | 0.0052 (3) | 0.0056 (3) | 0.0006 (3) |
N1 | 0.0195 (5) | 0.0127 (4) | 0.0120 (4) | 0.0042 (4) | 0.0038 (4) | 0.0003 (3) |
C1 | 0.0168 (5) | 0.0129 (5) | 0.0167 (5) | 0.0022 (4) | 0.0050 (4) | −0.0002 (4) |
C2 | 0.0164 (5) | 0.0127 (5) | 0.0153 (5) | 0.0018 (4) | 0.0040 (4) | 0.0023 (4) |
C3 | 0.0167 (5) | 0.0133 (5) | 0.0136 (5) | 0.0017 (4) | 0.0048 (4) | 0.0001 (4) |
C4 | 0.0169 (5) | 0.0152 (5) | 0.0142 (5) | 0.0024 (4) | 0.0041 (4) | 0.0011 (4) |
C5 | 0.0173 (5) | 0.0157 (5) | 0.0151 (5) | 0.0020 (4) | 0.0059 (4) | −0.0002 (4) |
C6 | 0.0194 (5) | 0.0201 (6) | 0.0147 (5) | 0.0039 (4) | 0.0054 (4) | 0.0008 (4) |
C7 | 0.0209 (6) | 0.0226 (6) | 0.0153 (5) | 0.0024 (5) | 0.0064 (4) | −0.0040 (4) |
C8 | 0.0215 (6) | 0.0157 (5) | 0.0202 (6) | 0.0022 (4) | 0.0082 (5) | −0.0032 (4) |
C9 | 0.0197 (5) | 0.0152 (5) | 0.0180 (6) | 0.0030 (4) | 0.0071 (4) | 0.0010 (4) |
C10 | 0.0160 (5) | 0.0154 (5) | 0.0139 (5) | 0.0013 (4) | 0.0059 (4) | −0.0005 (4) |
C11 | 0.0150 (5) | 0.0123 (5) | 0.0157 (5) | 0.0005 (4) | 0.0047 (4) | −0.0004 (4) |
C12 | 0.0176 (5) | 0.0139 (5) | 0.0134 (5) | 0.0025 (4) | 0.0045 (4) | 0.0011 (4) |
C13 | 0.0166 (5) | 0.0150 (5) | 0.0138 (5) | 0.0011 (4) | 0.0055 (4) | −0.0004 (4) |
C14 | 0.0191 (5) | 0.0186 (6) | 0.0133 (5) | 0.0038 (4) | 0.0044 (4) | 0.0015 (4) |
C15 | 0.0245 (6) | 0.0176 (6) | 0.0165 (5) | 0.0059 (5) | 0.0076 (5) | 0.0040 (4) |
C16 | 0.0233 (6) | 0.0135 (5) | 0.0175 (6) | 0.0040 (4) | 0.0074 (5) | 0.0020 (4) |
C17 | 0.0254 (6) | 0.0224 (6) | 0.0155 (5) | 0.0045 (5) | 0.0070 (5) | −0.0004 (4) |
C18 | 0.0199 (6) | 0.0275 (7) | 0.0235 (6) | 0.0025 (5) | 0.0058 (5) | 0.0031 (5) |
C19 | 0.0204 (6) | 0.0190 (6) | 0.0177 (6) | 0.0056 (4) | 0.0030 (4) | 0.0001 (4) |
C20 | 0.0212 (6) | 0.0154 (5) | 0.0160 (5) | 0.0058 (4) | 0.0061 (4) | 0.0010 (4) |
C21 | 0.0220 (6) | 0.0139 (5) | 0.0202 (6) | 0.0047 (4) | 0.0078 (5) | 0.0012 (4) |
C22 | 0.0278 (6) | 0.0165 (6) | 0.0198 (6) | 0.0071 (5) | 0.0050 (5) | 0.0009 (4) |
C23 | 0.0442 (8) | 0.0300 (7) | 0.0224 (7) | 0.0092 (6) | 0.0145 (6) | −0.0027 (5) |
C24 | 0.0314 (7) | 0.0223 (7) | 0.0268 (7) | 0.0057 (5) | −0.0011 (6) | −0.0044 (5) |
O1—C2 | 1.3604 (14) | C14—C15 | 1.5064 (17) |
O1—H1O1 | 0.98 (2) | C14—C17 | 1.5153 (16) |
O2—C4 | 1.2624 (14) | C14—C18 | 1.5203 (17) |
O3—C9 | 1.3610 (15) | C15—C16 | 1.3321 (16) |
O3—H1O3 | 0.88 (2) | C15—H15A | 0.93 |
O4—C13 | 1.3588 (13) | C16—H16A | 0.93 |
O4—C14 | 1.4688 (14) | C17—H17A | 0.96 |
N1—C11 | 1.3927 (14) | C17—H17B | 0.96 |
N1—C10 | 1.3995 (14) | C17—H17C | 0.96 |
N1—C19 | 1.4844 (15) | C18—H18A | 0.96 |
C1—C2 | 1.3855 (16) | C18—H18B | 0.96 |
C1—C13 | 1.4019 (16) | C18—H18C | 0.96 |
C1—C20 | 1.5113 (16) | C19—H19A | 0.96 |
C2—C3 | 1.4271 (16) | C19—H19B | 0.96 |
C3—C11 | 1.4099 (16) | C19—H19C | 0.96 |
C3—C4 | 1.4410 (15) | C20—C21 | 1.5082 (17) |
C4—C5 | 1.4585 (16) | C20—H20A | 0.97 |
C5—C10 | 1.3993 (17) | C20—H20B | 0.97 |
C5—C6 | 1.4079 (16) | C21—C22 | 1.3323 (17) |
C6—C7 | 1.3758 (17) | C21—H21A | 0.93 |
C6—H6A | 0.93 | C22—C23 | 1.5050 (19) |
C7—C8 | 1.3953 (18) | C22—C24 | 1.5053 (19) |
C7—H7A | 0.93 | C23—H23A | 0.96 |
C8—C9 | 1.3823 (16) | C23—H23B | 0.96 |
C8—H8A | 0.93 | C23—H23C | 0.96 |
C9—C10 | 1.4186 (16) | C24—H24A | 0.96 |
C11—C12 | 1.4085 (15) | C24—H24B | 0.96 |
C12—C13 | 1.4049 (16) | C24—H24C | 0.96 |
C12—C16 | 1.4601 (16) | ||
C2—O1—H1O1 | 101.5 (13) | C17—C14—C18 | 111.13 (10) |
C9—O3—H1O3 | 110.2 (13) | C16—C15—C14 | 119.69 (11) |
C13—O4—C14 | 117.12 (9) | C16—C15—H15A | 120.2 |
C11—N1—C10 | 119.09 (10) | C14—C15—H15A | 120.2 |
C11—N1—C19 | 117.83 (9) | C15—C16—C12 | 119.58 (11) |
C10—N1—C19 | 117.58 (9) | C15—C16—H16A | 120.2 |
C2—C1—C13 | 116.87 (10) | C12—C16—H16A | 120.2 |
C2—C1—C20 | 123.15 (11) | C14—C17—H17A | 109.5 |
C13—C1—C20 | 119.95 (10) | C14—C17—H17B | 109.5 |
O1—C2—C1 | 120.20 (10) | H17A—C17—H17B | 109.5 |
O1—C2—C3 | 118.25 (10) | C14—C17—H17C | 109.5 |
C1—C2—C3 | 121.54 (11) | H17A—C17—H17C | 109.5 |
C11—C3—C2 | 119.55 (10) | H17B—C17—H17C | 109.5 |
C11—C3—C4 | 120.67 (10) | C14—C18—H18A | 109.5 |
C2—C3—C4 | 119.77 (11) | C14—C18—H18B | 109.5 |
O2—C4—C3 | 121.89 (10) | H18A—C18—H18B | 109.5 |
O2—C4—C5 | 121.25 (10) | C14—C18—H18C | 109.5 |
C3—C4—C5 | 116.79 (10) | H18A—C18—H18C | 109.5 |
C10—C5—C6 | 120.80 (11) | H18B—C18—H18C | 109.5 |
C10—C5—C4 | 119.49 (10) | N1—C19—H19A | 109.5 |
C6—C5—C4 | 119.70 (11) | N1—C19—H19B | 109.5 |
C7—C6—C5 | 119.68 (12) | H19A—C19—H19B | 109.5 |
C7—C6—H6A | 120.2 | N1—C19—H19C | 109.5 |
C5—C6—H6A | 120.2 | H19A—C19—H19C | 109.5 |
C6—C7—C8 | 120.11 (11) | H19B—C19—H19C | 109.5 |
C6—C7—H7A | 119.9 | C21—C20—C1 | 110.51 (10) |
C8—C7—H7A | 119.9 | C21—C20—H20A | 109.5 |
C9—C8—C7 | 121.10 (11) | C1—C20—H20A | 109.5 |
C9—C8—H8A | 119.5 | C21—C20—H20B | 109.5 |
C7—C8—H8A | 119.5 | C1—C20—H20B | 109.5 |
O3—C9—C8 | 122.58 (11) | H20A—C20—H20B | 108.1 |
O3—C9—C10 | 117.72 (10) | C22—C21—C20 | 127.50 (12) |
C8—C9—C10 | 119.67 (11) | C22—C21—H21A | 116.3 |
C5—C10—N1 | 121.34 (10) | C20—C21—H21A | 116.3 |
C5—C10—C9 | 118.58 (10) | C21—C22—C23 | 123.88 (12) |
N1—C10—C9 | 120.06 (11) | C21—C22—C24 | 120.84 (12) |
N1—C11—C12 | 119.91 (10) | C23—C22—C24 | 115.27 (11) |
N1—C11—C3 | 120.07 (10) | C22—C23—H23A | 109.5 |
C12—C11—C3 | 120.02 (10) | C22—C23—H23B | 109.5 |
C13—C12—C11 | 117.58 (11) | H23A—C23—H23B | 109.5 |
C13—C12—C16 | 116.87 (10) | C22—C23—H23C | 109.5 |
C11—C12—C16 | 124.79 (10) | H23A—C23—H23C | 109.5 |
O4—C13—C1 | 115.59 (10) | H23B—C23—H23C | 109.5 |
O4—C13—C12 | 120.03 (10) | C22—C24—H24A | 109.5 |
C1—C13—C12 | 124.29 (10) | C22—C24—H24B | 109.5 |
O4—C14—C15 | 108.29 (9) | H24A—C24—H24B | 109.5 |
O4—C14—C17 | 105.00 (9) | C22—C24—H24C | 109.5 |
C15—C14—C17 | 112.06 (10) | H24A—C24—H24C | 109.5 |
O4—C14—C18 | 108.01 (10) | H24B—C24—H24C | 109.5 |
C15—C14—C18 | 111.99 (10) | ||
C13—C1—C2—O1 | −178.24 (10) | C19—N1—C11—C12 | −43.29 (15) |
C20—C1—C2—O1 | −0.31 (17) | C10—N1—C11—C3 | −17.49 (16) |
C13—C1—C2—C3 | 0.75 (17) | C19—N1—C11—C3 | 135.73 (11) |
C20—C1—C2—C3 | 178.68 (10) | C2—C3—C11—N1 | −174.13 (10) |
O1—C2—C3—C11 | 175.77 (10) | C4—C3—C11—N1 | 6.46 (16) |
C1—C2—C3—C11 | −3.23 (17) | C2—C3—C11—C12 | 4.89 (16) |
O1—C2—C3—C4 | −4.81 (16) | C4—C3—C11—C12 | −174.52 (10) |
C1—C2—C3—C4 | 176.18 (10) | N1—C11—C12—C13 | 174.99 (10) |
C11—C3—C4—O2 | −176.40 (11) | C3—C11—C12—C13 | −4.03 (16) |
C2—C3—C4—O2 | 4.19 (17) | N1—C11—C12—C16 | −15.31 (17) |
C11—C3—C4—C5 | 6.65 (16) | C3—C11—C12—C16 | 165.67 (11) |
C2—C3—C4—C5 | −172.77 (10) | C14—O4—C13—C1 | −155.25 (10) |
O2—C4—C5—C10 | 174.13 (11) | C14—O4—C13—C12 | 28.13 (15) |
C3—C4—C5—C10 | −8.89 (16) | C2—C1—C13—O4 | −176.40 (10) |
O2—C4—C5—C6 | −7.23 (17) | C20—C1—C13—O4 | 5.61 (15) |
C3—C4—C5—C6 | 169.75 (10) | C2—C1—C13—C12 | 0.07 (17) |
C10—C5—C6—C7 | 0.20 (18) | C20—C1—C13—C12 | −177.93 (11) |
C4—C5—C6—C7 | −178.42 (11) | C11—C12—C13—O4 | 177.89 (10) |
C5—C6—C7—C8 | 0.82 (18) | C16—C12—C13—O4 | 7.37 (16) |
C6—C7—C8—C9 | 0.16 (18) | C11—C12—C13—C1 | 1.57 (17) |
C7—C8—C9—O3 | 175.78 (11) | C16—C12—C13—C1 | −168.95 (11) |
C7—C8—C9—C10 | −2.12 (18) | C13—O4—C14—C15 | −48.10 (13) |
C6—C5—C10—N1 | 179.53 (10) | C13—O4—C14—C17 | −167.97 (9) |
C4—C5—C10—N1 | −1.85 (17) | C13—O4—C14—C18 | 73.37 (12) |
C6—C5—C10—C9 | −2.12 (17) | O4—C14—C15—C16 | 36.03 (15) |
C4—C5—C10—C9 | 176.51 (10) | C17—C14—C15—C16 | 151.37 (12) |
C11—N1—C10—C5 | 15.26 (16) | C18—C14—C15—C16 | −82.95 (14) |
C19—N1—C10—C5 | −138.02 (11) | C14—C15—C16—C12 | −3.98 (18) |
C11—N1—C10—C9 | −163.07 (10) | C13—C12—C16—C15 | −19.66 (17) |
C19—N1—C10—C9 | 43.65 (15) | C11—C12—C16—C15 | 170.58 (12) |
O3—C9—C10—C5 | −174.94 (10) | C2—C1—C20—C21 | −104.52 (13) |
C8—C9—C10—C5 | 3.06 (17) | C13—C1—C20—C21 | 73.35 (14) |
O3—C9—C10—N1 | 3.43 (16) | C1—C20—C21—C22 | −128.12 (13) |
C8—C9—C10—N1 | −178.57 (11) | C20—C21—C22—C23 | −0.7 (2) |
C10—N1—C11—C12 | 163.49 (10) | C20—C21—C22—C24 | −179.97 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···O2 | 0.98 (2) | 1.54 (2) | 2.4813 (13) | 160 (2) |
O3—H1O3···O1i | 0.89 (2) | 1.88 (2) | 2.7550 (13) | 167 (2) |
C6—H6A···O2ii | 0.93 | 2.55 | 3.3636 (15) | 147 |
C20—H20A···O1 | 0.97 | 2.50 | 2.8976 (15) | 105 |
C18—H18A···Cg1iii | 0.96 | 2.92 | 3.3513 (16) | 109 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y, −z; (iii) −x+2, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C24H25NO4 |
Mr | 391.45 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 9.1387 (1), 9.7188 (1), 11.7006 (2) |
α, β, γ (°) | 90.796 (1), 108.274 (1), 100.432 (1) |
V (Å3) | 967.71 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.20 × 0.17 × 0.13 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.982, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 27568, 5637, 4346 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.129, 1.06 |
No. of reflections | 5637 |
No. of parameters | 275 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.47, −0.29 |
Computer programs: APEX2 (Bruker, 2005), APEX2, SAINT (Bruker, 2005), SHELXTL (Sheldrick, 1998), SHELXTL and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···O2 | 0.98 (2) | 1.54 (2) | 2.4813 (13) | 160 (2) |
O3—H1O3···O1i | 0.89 (2) | 1.88 (2) | 2.7550 (13) | 167 (2) |
C6—H6A···O2ii | 0.93 | 2.55 | 3.3636 (15) | 147 |
C20—H20A···O1 | 0.97 | 2.50 | 2.8976 (15) | 105 |
C18—H18A···Cg1iii | 0.96 | 2.92 | 3.3513 (16) | 109 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y, −z; (iii) −x+2, −y, −z+1. |
Atalantia monophylla Corrêa is a mangrove plant, distributed in South-East Asia and known locally in Thai as Manao Phi. This plant has been used in folk medicine for several purposes such as the treatment of dysentery, chronic rheumatism and paralysis in India (Basa, 1975). Acridone alkaloids had been isolated from the petroleum ether extract of the root bark of this plant (Basu & Basa, 1972). In our continuing interest on the chemical constituents of Thai mangrove plants, we have examined the roots of A. monophylla collected from Trang Province in the southern part of Thailand. The title compound was isolated from the methylene chloride extract. It has shown several biological activities such as inhibition of EBV-EA induction (Itoigawa et al., 2003), antiviral (Kawaii et al., 1999a) and antiproliferative properties (Kawaii et al., 1999b).
The title molecule is chiral, but crystallized in the centrosymmetric space group P1. This indicates that the crude extract from which the compound was obtained is a racemic mixture and that the compound is a non-enzymatic product (Chantrapromma, Boonnak & Fun, 2005; Chantrapromma, Boonnak, Fun, Anjum et al., 2005; Fun et al., 2006; Kosela et al., 1999; Pancharoen et al., 1984).
The title molecule (Fig. 1) has a four-fused rings (A, B, C and D). The pyridine ring (B) is in an envelope conformation, with puckering parameters Q = 0.157 (1) Å, θ = 102.3 (4)° and φ = 170.5 (5)° (Cremer & Pople, 1975), atom N1 having the maximum deviation of 0.102 (1) Å. The chromene ring (D) adopts a screw-boat conformation, with the C14 and O4 atoms deviating from the ring mean plane by 0.276 (11) and -0.238 (1) Å, respectively. The prenyl group (C20–C24) is in a (-)-anticlinal conformation (Fig. 1), as evidenced by the torsion angle C2—C1—C20—C21 of -104.52 (13)°. The dihedral angle between the mean plane of the prenyl unit and the benzene ring C is 86.30 (7)°. The two methyl groups are axially and equatorially attached to the ring D at atom C14. The two hydroxyl groups are coplanar with the attached rings.
The bond lengths and angles in the title compound are within normal ranges (Allen et al., 1987).
Intramolecular O1—H1O1···O2 hydrogen bond generates an S(6) ring motif (Bernstein et al., 1995). The molecules are linked into a chain along the b axis by O3—H1O3···O1 hydrogen bonds (Fig. 2 and Table 1). These chains are interconnected into molecular sheets by weak C6—H6A···O2 hydrogen bonds (Table 1). In addition, the molecular packing is stabilized by C—H···π interactions involving the ring A (centroid Cg1).