
Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S2053229616020465/cu3109sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S2053229616020465/cu3109Isup2.hkl |
![]() | Portable Document Format (PDF) file https://doi.org/10.1107/S2053229616020465/cu3109sup4.pdf |
CCDC reference: 1524313
Data collection: X-AREA (Stoe & Cie, 2002); cell refinement: X-AREA (Stoe & Cie, 2002); data reduction: X-RED (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXL2013 (Sheldrick, 2015) and publCIF (Westrip, 2010).
[Pd(C38H47N5)] | F(000) = 1424 |
Mr = 680.20 | Dx = 1.357 Mg m−3 |
Monoclinic, C2/c | Cu Kα radiation, λ = 1.54186 Å |
a = 29.525 (2) Å | Cell parameters from 1454 reflections |
b = 4.9400 (8) Å | θ = 4–64° |
c = 25.6630 (11) Å | µ = 4.75 mm−1 |
β = 117.225 (1)° | T = 295 K |
V = 3328.4 (6) Å3 | Prism, red |
Z = 4 | 0.21 × 0.10 × 0.10 mm |
Stoe diffractometer | 3245 independent reflections |
Radiation source: Cu GeniX 3D | 2366 reflections with I > 2σ(I) |
None monochromator | Rint = 0.063 |
Detector resolution: 5.81 pixels mm-1 | θmax = 73.0°, θmin = 3.4° |
rotation method scans | h = −36→24 |
Absorption correction: multi-scan (Blessing, 1995) | k = −6→5 |
Tmin = 0.481, Tmax = 0.630 | l = −30→31 |
12253 measured reflections |
Refinement on F2 | 1 restraint |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters constrained |
wR(F2) = 0.183 | w = 1/[σ2(Fo2) + (0.075P)2 + 16.3947P] where P = (Fo2 + 2Fc2)/3 |
S = 1.11 | (Δ/σ)max < 0.001 |
3245 reflections | Δρmax = 0.69 e Å−3 |
221 parameters | Δρmin = −0.74 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Pd1 | 0.2500 | 0.2500 | 0.0000 | 0.0552 (2) | |
N1 | 0.26383 (19) | −0.0387 (11) | 0.0617 (2) | 0.0551 (12) | |
N2 | 0.32481 (19) | 0.2307 (12) | 0.0185 (2) | 0.0597 (12) | |
C2 | 0.2286 (3) | −0.1465 (15) | 0.0760 (3) | 0.0593 (15) | |
C3 | 0.2513 (3) | −0.3474 (15) | 0.1216 (3) | 0.0634 (16) | |
C4 | 0.3019 (3) | −0.3576 (16) | 0.1347 (3) | 0.0656 (17) | |
C5 | 0.3097 (3) | −0.1655 (13) | 0.0968 (3) | 0.0573 (15) | |
C7 | 0.3614 (2) | 0.0656 (15) | 0.0576 (3) | 0.0615 (16) | |
C8 | 0.4087 (2) | 0.1068 (17) | 0.0532 (3) | 0.0684 (18) | |
C9 | 0.3985 (3) | 0.3034 (16) | 0.0119 (3) | 0.071 (2) | |
C10 | 0.3464 (2) | 0.3815 (16) | −0.0087 (3) | 0.0612 (16) | |
C11 | 0.1778 (2) | −0.0736 (14) | 0.0509 (3) | 0.0611 (15) | |
H11 | 0.1577 | −0.1660 | 0.0642 | 0.073* | |
C12 | 0.4324 (3) | 0.407 (2) | −0.0127 (4) | 0.087 (2) | |
H12A | 0.4675 | 0.3725 | 0.0155 | 0.104* | |
H12B | 0.4281 | 0.6014 | −0.0175 | 0.104* | |
C13 | 0.4228 (4) | 0.283 (2) | −0.0709 (5) | 0.115 (4) | |
H13A | 0.4259 | 0.0896 | −0.0669 | 0.172* | |
H13B | 0.4473 | 0.3515 | −0.0824 | 0.172* | |
H13C | 0.3891 | 0.3289 | −0.1000 | 0.172* | |
C14 | 0.4594 (3) | −0.028 (2) | 0.0882 (5) | 0.101 (3) | |
H14A | 0.4762 | −0.0511 | 0.0637 | 0.121* | |
H14B | 0.4540 | −0.2064 | 0.1003 | 0.121* | |
C15 | 0.4940 (4) | 0.138 (3) | 0.1428 (6) | 0.162 (7) | |
H15A | 0.4994 | 0.3141 | 0.1311 | 0.243* | |
H15B | 0.5262 | 0.0470 | 0.1636 | 0.243* | |
H15C | 0.4781 | 0.1548 | 0.1680 | 0.243* | |
C18 | 0.3415 (3) | −0.5306 (19) | 0.1813 (4) | 0.087 (2) | |
H18A | 0.3674 | −0.5757 | 0.1695 | 0.105* | |
H18B | 0.3257 | −0.6984 | 0.1841 | 0.105* | |
C19 | 0.3667 (4) | −0.400 (3) | 0.2407 (4) | 0.130 (4) | |
H19A | 0.3830 | −0.2358 | 0.2386 | 0.195* | |
H19B | 0.3916 | −0.5217 | 0.2681 | 0.195* | |
H19C | 0.3415 | −0.3603 | 0.2534 | 0.195* | |
C20 | 0.2235 (3) | −0.5050 (17) | 0.1470 (3) | 0.0741 (19) | |
H20A | 0.2439 | −0.6597 | 0.1678 | 0.089* | |
H20B | 0.1920 | −0.5727 | 0.1154 | 0.089* | |
C21 | 0.2109 (4) | −0.3387 (19) | 0.1888 (4) | 0.092 (3) | |
H21A | 0.2415 | −0.2564 | 0.2180 | 0.138* | |
H21B | 0.1967 | −0.4549 | 0.2075 | 0.138* | |
H21C | 0.1868 | −0.2004 | 0.1673 | 0.138* | |
C6 | 0.3545 (3) | −0.1175 (15) | 0.0951 (3) | 0.0642 (16) | |
H6 | 0.3829 | −0.2144 | 0.1211 | 0.077* | 0.5 |
C16 | 0.4009 (6) | −0.272 (3) | 0.1390 (6) | 0.072 (4) | 0.5 |
H16 | 0.4070 | −0.4473 | 0.1303 | 0.087* | 0.5 |
N3 | 0.4312 (5) | −0.165 (3) | 0.1871 (6) | 0.081 (4) | 0.5 |
C17 | 0.4744 (8) | −0.347 (5) | 0.2266 (9) | 0.121 (8) | 0.5 |
H17A | 0.4681 | −0.5281 | 0.2113 | 0.182* | 0.5 |
H17B | 0.4769 | −0.3463 | 0.2652 | 0.182* | 0.5 |
H17C | 0.5058 | −0.2824 | 0.2283 | 0.182* | 0.5 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Pd1 | 0.0576 (4) | 0.0599 (4) | 0.0509 (3) | −0.0035 (3) | 0.0273 (3) | −0.0071 (3) |
N1 | 0.060 (3) | 0.053 (3) | 0.055 (3) | −0.002 (2) | 0.028 (2) | −0.011 (2) |
N2 | 0.059 (3) | 0.070 (3) | 0.055 (3) | −0.005 (3) | 0.030 (2) | −0.003 (3) |
C2 | 0.070 (4) | 0.060 (3) | 0.053 (3) | −0.005 (3) | 0.033 (3) | −0.008 (3) |
C3 | 0.079 (4) | 0.058 (4) | 0.056 (4) | −0.002 (3) | 0.033 (3) | −0.002 (3) |
C4 | 0.077 (4) | 0.059 (4) | 0.060 (4) | −0.001 (4) | 0.031 (3) | −0.007 (3) |
C5 | 0.071 (4) | 0.054 (3) | 0.053 (3) | 0.002 (3) | 0.033 (3) | −0.007 (3) |
C7 | 0.055 (3) | 0.068 (4) | 0.062 (4) | 0.005 (3) | 0.027 (3) | −0.004 (3) |
C8 | 0.060 (4) | 0.073 (5) | 0.069 (4) | 0.002 (4) | 0.028 (3) | −0.002 (4) |
C9 | 0.064 (4) | 0.075 (5) | 0.076 (4) | −0.011 (3) | 0.034 (3) | −0.008 (4) |
C10 | 0.054 (3) | 0.071 (4) | 0.062 (4) | −0.009 (3) | 0.029 (3) | −0.009 (3) |
C11 | 0.067 (4) | 0.058 (4) | 0.066 (4) | −0.005 (3) | 0.037 (3) | −0.006 (3) |
C12 | 0.063 (4) | 0.103 (7) | 0.099 (6) | −0.006 (5) | 0.042 (4) | 0.013 (5) |
C13 | 0.100 (6) | 0.146 (10) | 0.134 (9) | −0.003 (7) | 0.084 (7) | 0.007 (7) |
C14 | 0.066 (5) | 0.097 (7) | 0.129 (8) | 0.002 (5) | 0.036 (5) | 0.018 (6) |
C15 | 0.096 (7) | 0.113 (9) | 0.168 (12) | −0.015 (7) | −0.034 (8) | 0.017 (9) |
C18 | 0.098 (6) | 0.077 (5) | 0.085 (5) | 0.019 (5) | 0.041 (5) | 0.015 (4) |
C19 | 0.124 (8) | 0.146 (10) | 0.078 (6) | 0.036 (8) | 0.010 (6) | −0.003 (7) |
C20 | 0.085 (5) | 0.074 (5) | 0.067 (4) | −0.007 (4) | 0.037 (4) | 0.007 (4) |
C21 | 0.119 (7) | 0.081 (6) | 0.096 (6) | −0.005 (5) | 0.067 (6) | 0.007 (5) |
C6 | 0.071 (4) | 0.065 (4) | 0.058 (4) | 0.003 (4) | 0.031 (3) | −0.009 (3) |
C16 | 0.078 (9) | 0.069 (9) | 0.072 (8) | 0.008 (8) | 0.035 (7) | −0.004 (8) |
N3 | 0.075 (8) | 0.086 (9) | 0.068 (7) | 0.017 (7) | 0.019 (6) | 0.002 (7) |
C17 | 0.100 (14) | 0.140 (19) | 0.093 (13) | 0.038 (14) | 0.018 (10) | 0.020 (13) |
Pd1—N1 | 2.029 (5) | C13—H13B | 0.9600 |
Pd1—N1i | 2.029 (5) | C13—H13C | 0.9600 |
Pd1—N2i | 2.038 (5) | C14—C15 | 1.539 (15) |
Pd1—N2 | 2.038 (5) | C14—H14A | 0.9700 |
N1—C2 | 1.359 (8) | C14—H14B | 0.9700 |
N1—C5 | 1.387 (8) | C15—H15A | 0.9600 |
N2—C7 | 1.359 (8) | C15—H15B | 0.9600 |
N2—C10 | 1.364 (8) | C15—H15C | 0.9600 |
C2—C11 | 1.381 (9) | C18—C19 | 1.502 (13) |
C2—C3 | 1.445 (10) | C18—H18A | 0.9700 |
C3—C4 | 1.374 (10) | C18—H18B | 0.9700 |
C3—C20 | 1.482 (10) | C19—H19A | 0.9600 |
C4—C5 | 1.452 (10) | C19—H19B | 0.9600 |
C4—C18 | 1.499 (11) | C19—H19C | 0.9600 |
C5—C6 | 1.362 (10) | C20—C21 | 1.526 (12) |
C7—C6 | 1.403 (10) | C20—H20A | 0.9700 |
C7—C8 | 1.464 (9) | C20—H20B | 0.9700 |
C8—C9 | 1.366 (11) | C21—H21A | 0.9600 |
C8—C14 | 1.504 (10) | C21—H21B | 0.9600 |
C9—C10 | 1.430 (10) | C21—H21C | 0.9600 |
C9—C12 | 1.498 (10) | C6—C16 | 1.523 (17) |
C10—C11i | 1.370 (10) | C6—H6 | 0.9300 |
C11—C10i | 1.370 (10) | C16—N3 | 1.26 (2) |
C11—H11 | 0.9300 | C16—H16 | 0.9300 |
C12—C13 | 1.516 (13) | N3—C17 | 1.51 (2) |
C12—H12A | 0.9700 | C17—H17A | 0.9600 |
C12—H12B | 0.9700 | C17—H17B | 0.9600 |
C13—H13A | 0.9600 | C17—H17C | 0.9600 |
N1—Pd1—N1i | 180.0 | C8—C14—H14A | 109.2 |
N1—Pd1—N2i | 91.4 (2) | C15—C14—H14A | 109.2 |
N1i—Pd1—N2i | 88.6 (2) | C8—C14—H14B | 109.2 |
N1—Pd1—N2 | 88.6 (2) | C15—C14—H14B | 109.2 |
N1i—Pd1—N2 | 91.4 (2) | H14A—C14—H14B | 107.9 |
N2i—Pd1—N2 | 180.00 (7) | C14—C15—H15A | 109.5 |
C2—N1—C5 | 106.8 (6) | C14—C15—H15B | 109.5 |
C2—N1—Pd1 | 125.4 (4) | H15A—C15—H15B | 109.5 |
C5—N1—Pd1 | 127.7 (4) | C14—C15—H15C | 109.5 |
C7—N2—C10 | 107.7 (5) | H15A—C15—H15C | 109.5 |
C7—N2—Pd1 | 127.8 (4) | H15B—C15—H15C | 109.5 |
C10—N2—Pd1 | 124.5 (5) | C4—C18—C19 | 114.1 (8) |
N1—C2—C11 | 125.0 (6) | C4—C18—H18A | 108.7 |
N1—C2—C3 | 111.0 (6) | C19—C18—H18A | 108.7 |
C11—C2—C3 | 124.0 (6) | C4—C18—H18B | 108.7 |
C4—C3—C2 | 105.9 (6) | C19—C18—H18B | 108.7 |
C4—C3—C20 | 129.2 (7) | H18A—C18—H18B | 107.6 |
C2—C3—C20 | 124.9 (7) | C18—C19—H19A | 109.5 |
C3—C4—C5 | 107.5 (6) | C18—C19—H19B | 109.5 |
C3—C4—C18 | 125.5 (7) | H19A—C19—H19B | 109.5 |
C5—C4—C18 | 127.0 (7) | C18—C19—H19C | 109.5 |
C6—C5—N1 | 125.1 (6) | H19A—C19—H19C | 109.5 |
C6—C5—C4 | 126.1 (7) | H19B—C19—H19C | 109.5 |
N1—C5—C4 | 108.8 (6) | C3—C20—C21 | 112.9 (7) |
N2—C7—C6 | 125.2 (6) | C3—C20—H20A | 109.0 |
N2—C7—C8 | 109.0 (6) | C21—C20—H20A | 109.0 |
C6—C7—C8 | 125.8 (6) | C3—C20—H20B | 109.0 |
C9—C8—C7 | 106.1 (6) | C21—C20—H20B | 109.0 |
C9—C8—C14 | 125.8 (7) | H20A—C20—H20B | 107.8 |
C7—C8—C14 | 128.1 (7) | C20—C21—H21A | 109.5 |
C8—C9—C10 | 107.3 (6) | C20—C21—H21B | 109.5 |
C8—C9—C12 | 128.1 (7) | H21A—C21—H21B | 109.5 |
C10—C9—C12 | 124.4 (7) | C20—C21—H21C | 109.5 |
N2—C10—C11i | 125.8 (6) | H21A—C21—H21C | 109.5 |
N2—C10—C9 | 109.8 (6) | H21B—C21—H21C | 109.5 |
C11i—C10—C9 | 124.4 (6) | C5—C6—C7 | 125.6 (7) |
C10i—C11—C2 | 127.8 (6) | C5—C6—C16 | 116.5 (8) |
C10i—C11—H11 | 116.1 | C7—C6—C16 | 117.8 (8) |
C2—C11—H11 | 116.1 | C5—C6—H6 | 117.2 |
C9—C12—C13 | 114.7 (7) | C7—C6—H6 | 117.2 |
C9—C12—H12A | 108.6 | C16—C6—H6 | 1.5 |
C13—C12—H12A | 108.6 | N3—C16—C6 | 120.5 (13) |
C9—C12—H12B | 108.6 | N3—C16—H16 | 119.8 |
C13—C12—H12B | 108.6 | C6—C16—H16 | 119.8 |
H12A—C12—H12B | 107.6 | C16—N3—C17 | 114.2 (16) |
C12—C13—H13A | 109.5 | N3—C17—H17A | 109.5 |
C12—C13—H13B | 109.5 | N3—C17—H17B | 109.5 |
H13A—C13—H13B | 109.5 | H17A—C17—H17B | 109.5 |
C12—C13—H13C | 109.5 | N3—C17—H17C | 109.5 |
H13A—C13—H13C | 109.5 | H17A—C17—H17C | 109.5 |
H13B—C13—H13C | 109.5 | H17B—C17—H17C | 109.5 |
C8—C14—C15 | 111.9 (9) | ||
C5—N1—C2—C11 | 179.8 (6) | C14—C8—C9—C12 | 7.3 (14) |
Pd1—N1—C2—C11 | −0.6 (9) | C7—N2—C10—C11i | −179.6 (7) |
C5—N1—C2—C3 | 0.3 (7) | Pd1—N2—C10—C11i | 2.3 (10) |
Pd1—N1—C2—C3 | 179.9 (4) | C7—N2—C10—C9 | 2.3 (8) |
N1—C2—C3—C4 | 0.2 (8) | Pd1—N2—C10—C9 | −175.8 (5) |
C11—C2—C3—C4 | −179.3 (6) | C8—C9—C10—N2 | −1.4 (8) |
N1—C2—C3—C20 | −179.5 (6) | C12—C9—C10—N2 | 173.7 (7) |
C11—C2—C3—C20 | 1.0 (11) | C8—C9—C10—C11i | −179.5 (7) |
C2—C3—C4—C5 | −0.6 (7) | C12—C9—C10—C11i | −4.5 (12) |
C20—C3—C4—C5 | 179.1 (7) | N1—C2—C11—C10i | −1.2 (11) |
C2—C3—C4—C18 | 177.6 (7) | C3—C2—C11—C10i | 178.2 (7) |
C20—C3—C4—C18 | −2.7 (13) | C8—C9—C12—C13 | 97.7 (11) |
C2—N1—C5—C6 | 178.7 (6) | C10—C9—C12—C13 | −76.4 (11) |
Pd1—N1—C5—C6 | −0.8 (9) | C9—C8—C14—C15 | 84.7 (12) |
C2—N1—C5—C4 | −0.7 (7) | C7—C8—C14—C15 | −92.7 (12) |
Pd1—N1—C5—C4 | 179.8 (4) | C3—C4—C18—C19 | −88.0 (11) |
C3—C4—C5—C6 | −178.6 (6) | C5—C4—C18—C19 | 89.9 (11) |
C18—C4—C5—C6 | 3.2 (12) | C4—C3—C20—C21 | 105.2 (9) |
C3—C4—C5—N1 | 0.8 (7) | C2—C3—C20—C21 | −75.1 (9) |
C18—C4—C5—N1 | −177.4 (7) | N1—C5—C6—C7 | −0.4 (11) |
C10—N2—C7—C6 | 178.7 (6) | C4—C5—C6—C7 | 178.9 (7) |
Pd1—N2—C7—C6 | −3.3 (10) | N1—C5—C6—C16 | 178.0 (8) |
C10—N2—C7—C8 | −2.2 (8) | C4—C5—C6—C16 | −2.6 (12) |
Pd1—N2—C7—C8 | 175.8 (4) | N2—C7—C6—C5 | 2.6 (11) |
N2—C7—C8—C9 | 1.4 (8) | C8—C7—C6—C5 | −176.3 (7) |
C6—C7—C8—C9 | −179.6 (7) | N2—C7—C6—C16 | −175.9 (9) |
N2—C7—C8—C14 | 179.1 (8) | C8—C7—C6—C16 | 5.2 (12) |
C6—C7—C8—C14 | −1.8 (13) | C5—C6—C16—N3 | −95.9 (16) |
C7—C8—C9—C10 | 0.0 (8) | C7—C6—C16—N3 | 82.7 (16) |
C14—C8—C9—C10 | −177.8 (8) | C6—C16—N3—C17 | 178.2 (15) |
C7—C8—C9—C12 | −174.8 (8) |
Symmetry code: (i) −x+1/2, −y+1/2, −z. |