The title polysubstituted pyridines, ethyl 4-hydroxy-2,6-diphenyl-5-(phenylsulfanyl)pyridine-3-carboxylate, C
26H
21NO
3S, (I), and ethyl 2,6-bis(4-fluorophenyl)-4-hydroxy-5-(4-methylphenylsulfanyl)pyridine-3-carboxylate, C
27H
21F
2NO
3S, (II), adopt nearly planar structures. The crystal structure of (I) is stabilized by intermolecular C—H

O and C—H

π interactions. The C—H

O hydrogen bonds generate rings of motifs
R22(14) and
R22(20). The crystal structure of (II) is stabilized by intermolecular C—H

F and C—H

π interactions. The C—H

F bond generates a linear chain of motif
C(14). In addition, in (I) and (II), intramolecular O—H

O interactions generating a graph-set motif
S(6) are found. No significant aryl–aryl or π–π interactions exist in these structures.
Supporting information
CCDC references: 638337; 638338
The preparation of (I) was carried out as follows. To a solution of ethyl
4-hydroxy-2,6-diphenyl-5-(phenylsulfanyl)-1,2,5,6-tetrahydro-3-pyridine
carboxylate (0.1 g, 0.2 mmol) in benzene (10 ml), dichlorodicyanobenzoquinone
(0.105 g, 0.4 mmol) was added and the mixture was refluxed in a water bath for
30 min. The precipitated DDQ-H2 was filtered off and the filtrate evaporated
under vaccum. The residue was recrystallized from ethanol to give the product,
(I) (yield 0.072 g, 73%; m.p. 421–422 K).
The preparation of (II) was carried out as follows. To a solution of ethyl
2,6-bis(4-fluorophenyl)-4-hydroxy-5-[(4-methylphenyl)sulfanyl]-1,2,5,6-tetrahydro-3-pyridinecarboxylate (0.1 g, 0.2 mmol) in benzene (10 ml),
dichlorodicyanobenzoquinone (0.094 g, 0.4 mmol) was added and the mixture was
refluxed in a water bath for 30 min. The precipitated DDQ-H2 was filtered off
and the filtrate evaporated under vaccum. The residue was recrystallized from
ethanol to give the product, (II) (yield 0.071 g, 72%; m.p. 380–381 K).
H atoms were placed in calculated positions and allowed to ride on their carrier
atoms, with C—H = 0.93–0.97 Å and O—H = 0.82 Å, and with
Uiso(H) = 1.2Ueq(C) for CH2 and CH groups, 1.5Ueq
for CH3 groups and 1.5Ueq(O)for OH groups.
Data collection: SMART (Bruker, 2001) for (I); CAD-4 EXPRESS (Enraf–Nonius, 1994) for (II). Cell refinement: SAINT (Bruker, 2001) for (I); CAD-4 EXPRESS for (II). Data reduction: SAINT (Bruker, 2001) for (I); XCAD4 (Harms & Wocadlo, 1996) for (II). For both compounds, program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.
(I) Ethyl 4-hydroxy-2,6-diphenyl-5-(phenylsulfanyl)pyridine-3-carboxylate
top
Crystal data top
C26H21NO3S | F(000) = 896 |
Mr = 427.50 | Dx = 1.325 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1024 reflections |
a = 10.3728 (2) Å | θ = 2.1–28.3° |
b = 17.1008 (4) Å | µ = 0.18 mm−1 |
c = 12.9444 (3) Å | T = 105 K |
β = 111.041 (1)° | Block, colourless |
V = 2143.02 (8) Å3 | 0.28 × 0.14 × 0.12 mm |
Z = 4 | |
Data collection top
Bruker SMART APEX CCD area-detector diffractometer | 5325 independent reflections |
Radiation source: fine-focus sealed tube | 4855 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.043 |
Detector resolution: 8 pixels mm-1 | θmax = 28.3°, θmin = 2.1° |
ω scans | h = −13→13 |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | k = −22→22 |
Tmin = 0.97, Tmax = 0.979 | l = −17→17 |
32101 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0504P)2 + 1.7947P] where P = (Fo2 + 2Fc2)/3 |
5325 reflections | (Δ/σ)max = 0.001 |
280 parameters | Δρmax = 0.84 e Å−3 |
1 restraint | Δρmin = −0.78 e Å−3 |
Crystal data top
C26H21NO3S | V = 2143.02 (8) Å3 |
Mr = 427.50 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.3728 (2) Å | µ = 0.18 mm−1 |
b = 17.1008 (4) Å | T = 105 K |
c = 12.9444 (3) Å | 0.28 × 0.14 × 0.12 mm |
β = 111.041 (1)° | |
Data collection top
Bruker SMART APEX CCD area-detector diffractometer | 5325 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 4855 reflections with I > 2σ(I) |
Tmin = 0.97, Tmax = 0.979 | Rint = 0.043 |
32101 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.040 | 1 restraint |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.84 e Å−3 |
5325 reflections | Δρmin = −0.78 e Å−3 |
280 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.53613 (3) | 0.111038 (19) | 0.24647 (3) | 0.01821 (10) | |
O3 | −0.04370 (10) | −0.00306 (6) | 0.22688 (8) | 0.0178 (2) | |
O2 | −0.03086 (10) | 0.06894 (6) | 0.08528 (8) | 0.0208 (2) | |
N1 | 0.35713 (11) | −0.08449 (6) | 0.30626 (9) | 0.0151 (2) | |
C4 | 0.26934 (14) | 0.06118 (7) | 0.20182 (10) | 0.0152 (2) | |
C5 | 0.41167 (13) | 0.04426 (8) | 0.25795 (11) | 0.0155 (2) | |
C2 | 0.22209 (13) | −0.06883 (7) | 0.25484 (10) | 0.0139 (2) | |
O1 | 0.23038 (13) | 0.13075 (7) | 0.14915 (11) | 0.0320 (3) | |
H1 | 0.1458 | 0.1331 | 0.1226 | 0.048* | |
C6 | 0.44965 (13) | −0.02807 (8) | 0.31048 (11) | 0.0148 (2) | |
C7 | 0.02297 (13) | 0.02565 (7) | 0.16414 (11) | 0.0150 (2) | |
C21 | 0.13040 (13) | −0.13751 (7) | 0.24604 (11) | 0.0147 (2) | |
C3 | 0.17215 (13) | 0.00395 (7) | 0.20649 (10) | 0.0140 (2) | |
C52 | 0.46664 (15) | 0.18705 (9) | 0.41216 (12) | 0.0223 (3) | |
H52 | 0.4067 | 0.1461 | 0.4099 | 0.027* | |
C61 | 0.59700 (13) | −0.05049 (8) | 0.36987 (11) | 0.0168 (3) | |
C51 | 0.54401 (14) | 0.18656 (8) | 0.34340 (11) | 0.0167 (2) | |
C55 | 0.64774 (16) | 0.30974 (9) | 0.42023 (12) | 0.0239 (3) | |
H55 | 0.7086 | 0.3504 | 0.4234 | 0.029* | |
C22 | 0.15448 (14) | −0.18766 (8) | 0.33627 (11) | 0.0187 (3) | |
H22 | 0.2240 | −0.1763 | 0.4035 | 0.022* | |
C26 | 0.02641 (15) | −0.15553 (8) | 0.14508 (11) | 0.0194 (3) | |
H26 | 0.0098 | −0.1224 | 0.0847 | 0.023* | |
C62 | 0.64739 (15) | −0.11835 (8) | 0.33759 (13) | 0.0214 (3) | |
H62 | 0.5887 | −0.1495 | 0.2815 | 0.026* | |
C66 | 0.68497 (15) | −0.00516 (9) | 0.45660 (12) | 0.0223 (3) | |
H66 | 0.6519 | 0.0398 | 0.4790 | 0.027* | |
C63 | 0.78557 (16) | −0.13937 (9) | 0.38927 (15) | 0.0279 (3) | |
H63 | 0.8195 | −0.1837 | 0.3662 | 0.033* | |
C56 | 0.63519 (15) | 0.24782 (8) | 0.34790 (12) | 0.0211 (3) | |
H56 | 0.6873 | 0.2471 | 0.3025 | 0.025* | |
C23 | 0.07422 (16) | −0.25479 (9) | 0.32540 (13) | 0.0232 (3) | |
H23 | 0.0895 | −0.2877 | 0.3858 | 0.028* | |
C9 | −0.28237 (16) | −0.02996 (11) | 0.10367 (15) | 0.0313 (3) | |
H9A | −0.3764 | −0.0138 | 0.0865 | 0.047* | |
H9B | −0.2729 | −0.0840 | 0.1253 | 0.047* | |
H9C | −0.2574 | −0.0235 | 0.0396 | 0.047* | |
C8 | −0.18861 (14) | 0.01925 (9) | 0.19726 (12) | 0.0209 (3) | |
H8A | −0.1996 | 0.0739 | 0.1756 | 0.025* | |
H8B | −0.2152 | 0.0133 | 0.2614 | 0.025* | |
C25 | −0.05231 (16) | −0.22294 (9) | 0.13464 (12) | 0.0244 (3) | |
H25 | −0.1211 | −0.2348 | 0.0672 | 0.029* | |
C54 | 0.56959 (17) | 0.31116 (9) | 0.48794 (12) | 0.0247 (3) | |
H54 | 0.5770 | 0.3531 | 0.5355 | 0.030* | |
C53 | 0.48040 (17) | 0.24970 (9) | 0.48418 (13) | 0.0262 (3) | |
H53 | 0.4293 | 0.2504 | 0.5303 | 0.031* | |
C24 | −0.02860 (16) | −0.27258 (9) | 0.22460 (13) | 0.0245 (3) | |
H24 | −0.0814 | −0.3176 | 0.2174 | 0.029* | |
C64 | 0.87261 (16) | −0.09418 (10) | 0.47512 (14) | 0.0301 (3) | |
H64 | 0.9646 | −0.1085 | 0.5097 | 0.036* | |
C65 | 0.82238 (16) | −0.02752 (10) | 0.50947 (13) | 0.0277 (3) | |
H65 | 0.8805 | 0.0022 | 0.5678 | 0.033* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.01923 (17) | 0.01681 (17) | 0.02316 (17) | −0.00354 (12) | 0.01313 (13) | −0.00145 (12) |
O3 | 0.0130 (4) | 0.0218 (5) | 0.0196 (4) | 0.0026 (3) | 0.0071 (4) | 0.0037 (4) |
O2 | 0.0196 (5) | 0.0209 (5) | 0.0213 (5) | 0.0040 (4) | 0.0068 (4) | 0.0060 (4) |
N1 | 0.0146 (5) | 0.0142 (5) | 0.0171 (5) | 0.0002 (4) | 0.0062 (4) | 0.0006 (4) |
C4 | 0.0180 (6) | 0.0137 (6) | 0.0158 (6) | −0.0003 (5) | 0.0082 (5) | −0.0012 (4) |
C5 | 0.0160 (6) | 0.0152 (6) | 0.0177 (6) | −0.0022 (5) | 0.0088 (5) | −0.0010 (5) |
C2 | 0.0146 (6) | 0.0142 (6) | 0.0141 (5) | −0.0001 (4) | 0.0065 (4) | −0.0003 (4) |
O1 | 0.0310 (6) | 0.0260 (6) | 0.0392 (7) | 0.0017 (5) | 0.0129 (5) | 0.0063 (5) |
C6 | 0.0149 (6) | 0.0160 (6) | 0.0151 (5) | −0.0004 (5) | 0.0074 (5) | −0.0012 (4) |
C7 | 0.0161 (6) | 0.0128 (6) | 0.0165 (6) | 0.0000 (4) | 0.0063 (5) | −0.0015 (4) |
C21 | 0.0138 (5) | 0.0123 (5) | 0.0188 (6) | 0.0008 (4) | 0.0070 (5) | −0.0001 (4) |
C3 | 0.0146 (6) | 0.0137 (6) | 0.0146 (6) | 0.0005 (4) | 0.0062 (5) | −0.0002 (4) |
C52 | 0.0221 (7) | 0.0219 (7) | 0.0269 (7) | −0.0051 (5) | 0.0136 (6) | −0.0031 (5) |
C61 | 0.0143 (6) | 0.0193 (6) | 0.0172 (6) | −0.0011 (5) | 0.0062 (5) | 0.0034 (5) |
C51 | 0.0160 (6) | 0.0158 (6) | 0.0180 (6) | 0.0005 (5) | 0.0057 (5) | 0.0017 (5) |
C55 | 0.0279 (7) | 0.0190 (7) | 0.0231 (7) | −0.0071 (5) | 0.0070 (6) | 0.0010 (5) |
C22 | 0.0171 (6) | 0.0175 (6) | 0.0198 (6) | −0.0006 (5) | 0.0045 (5) | 0.0029 (5) |
C26 | 0.0222 (6) | 0.0172 (6) | 0.0176 (6) | −0.0018 (5) | 0.0056 (5) | 0.0008 (5) |
C62 | 0.0174 (6) | 0.0187 (6) | 0.0271 (7) | 0.0001 (5) | 0.0068 (5) | 0.0024 (5) |
C66 | 0.0203 (7) | 0.0279 (7) | 0.0187 (6) | −0.0034 (5) | 0.0072 (5) | −0.0002 (5) |
C63 | 0.0206 (7) | 0.0231 (7) | 0.0398 (9) | 0.0060 (6) | 0.0107 (6) | 0.0087 (6) |
C56 | 0.0230 (7) | 0.0206 (7) | 0.0218 (6) | −0.0043 (5) | 0.0105 (5) | 0.0013 (5) |
C23 | 0.0247 (7) | 0.0184 (6) | 0.0260 (7) | −0.0024 (5) | 0.0085 (6) | 0.0059 (5) |
C9 | 0.0184 (7) | 0.0366 (9) | 0.0355 (9) | −0.0019 (6) | 0.0053 (6) | −0.0044 (7) |
C8 | 0.0134 (6) | 0.0248 (7) | 0.0251 (7) | 0.0033 (5) | 0.0077 (5) | 0.0019 (5) |
C25 | 0.0261 (7) | 0.0211 (7) | 0.0219 (7) | −0.0067 (6) | 0.0039 (6) | −0.0025 (5) |
C54 | 0.0302 (8) | 0.0203 (7) | 0.0216 (7) | −0.0007 (6) | 0.0070 (6) | −0.0031 (5) |
C53 | 0.0278 (7) | 0.0279 (8) | 0.0273 (7) | −0.0020 (6) | 0.0153 (6) | −0.0048 (6) |
C24 | 0.0255 (7) | 0.0173 (6) | 0.0297 (7) | −0.0072 (5) | 0.0087 (6) | 0.0003 (5) |
C64 | 0.0157 (6) | 0.0372 (9) | 0.0338 (8) | 0.0016 (6) | 0.0044 (6) | 0.0146 (7) |
C65 | 0.0200 (7) | 0.0390 (9) | 0.0199 (7) | −0.0077 (6) | 0.0022 (5) | 0.0045 (6) |
Geometric parameters (Å, º) top
S1—C5 | 1.7693 (13) | C22—H22 | 0.9300 |
S1—C51 | 1.7819 (14) | C26—C25 | 1.3909 (19) |
O3—C7 | 1.3350 (16) | C26—H26 | 0.9300 |
O3—C8 | 1.4622 (16) | C62—C63 | 1.394 (2) |
O2—C7 | 1.2216 (16) | C62—H62 | 0.9300 |
N1—C2 | 1.3444 (16) | C66—C65 | 1.395 (2) |
N1—C6 | 1.3480 (17) | C66—H66 | 0.9300 |
C4—O1 | 1.3586 (17) | C63—C64 | 1.388 (2) |
C4—C5 | 1.4216 (18) | C63—H63 | 0.9300 |
C4—C3 | 1.4218 (17) | C56—H56 | 0.9300 |
C5—C6 | 1.3984 (18) | C23—C24 | 1.390 (2) |
C2—C3 | 1.4059 (17) | C23—H23 | 0.9300 |
C2—C21 | 1.4896 (17) | C9—C8 | 1.509 (2) |
O1—H1 | 0.8200 | C9—H9A | 0.9600 |
C6—C61 | 1.4935 (18) | C9—H9B | 0.9600 |
C7—C3 | 1.4911 (17) | C9—H9C | 0.9600 |
C21—C22 | 1.3973 (18) | C8—H8A | 0.9700 |
C21—C26 | 1.3979 (18) | C8—H8B | 0.9700 |
C52—C53 | 1.393 (2) | C25—C24 | 1.390 (2) |
C52—C51 | 1.3963 (19) | C25—H25 | 0.9300 |
C52—H52 | 0.9300 | C54—C53 | 1.390 (2) |
C61—C62 | 1.397 (2) | C54—H54 | 0.9300 |
C61—C66 | 1.3994 (19) | C53—H53 | 0.9300 |
C51—C56 | 1.3985 (19) | C24—H24 | 0.9300 |
C55—C56 | 1.388 (2) | C64—C65 | 1.391 (3) |
C55—C54 | 1.391 (2) | C64—H64 | 0.9300 |
C55—H55 | 0.9300 | C65—H65 | 0.9300 |
C22—C23 | 1.3951 (19) | | |
| | | |
C5—S1—C51 | 105.01 (6) | C63—C62—H62 | 120.0 |
C7—O3—C8 | 116.93 (10) | C61—C62—H62 | 120.0 |
C2—N1—C6 | 118.53 (11) | C65—C66—C61 | 119.93 (14) |
O1—C4—C5 | 120.13 (12) | C65—C66—H66 | 120.0 |
O1—C4—C3 | 122.44 (12) | C61—C66—H66 | 120.0 |
C5—C4—C3 | 117.41 (12) | C64—C63—C62 | 120.12 (15) |
C6—C5—C4 | 119.21 (12) | C64—C63—H63 | 119.9 |
C6—C5—S1 | 121.68 (10) | C62—C63—H63 | 119.9 |
C4—C5—S1 | 118.75 (10) | C55—C56—C51 | 119.85 (13) |
N1—C2—C3 | 123.27 (12) | C55—C56—H56 | 120.1 |
N1—C2—C21 | 113.82 (11) | C51—C56—H56 | 120.1 |
C3—C2—C21 | 122.75 (11) | C24—C23—C22 | 120.24 (13) |
C4—O1—H1 | 109.5 | C24—C23—H23 | 119.9 |
N1—C6—C5 | 122.77 (12) | C22—C23—H23 | 119.9 |
N1—C6—C61 | 114.79 (11) | C8—C9—H9A | 109.5 |
C5—C6—C61 | 122.34 (12) | C8—C9—H9B | 109.5 |
O2—C7—O3 | 123.36 (12) | H9A—C9—H9B | 109.5 |
O2—C7—C3 | 124.10 (12) | C8—C9—H9C | 109.5 |
O3—C7—C3 | 112.38 (11) | H9A—C9—H9C | 109.5 |
C22—C21—C26 | 119.50 (12) | H9B—C9—H9C | 109.5 |
C22—C21—C2 | 120.16 (12) | O3—C8—C9 | 111.76 (12) |
C26—C21—C2 | 120.16 (12) | O3—C8—H8A | 109.3 |
C2—C3—C4 | 118.35 (12) | C9—C8—H8A | 109.3 |
C2—C3—C7 | 123.49 (11) | O3—C8—H8B | 109.3 |
C4—C3—C7 | 118.11 (11) | C9—C8—H8B | 109.3 |
C53—C52—C51 | 119.13 (13) | H8A—C8—H8B | 107.9 |
C53—C52—H52 | 120.4 | C24—C25—C26 | 120.24 (13) |
C51—C52—H52 | 120.4 | C24—C25—H25 | 119.9 |
C62—C61—C66 | 119.60 (13) | C26—C25—H25 | 119.9 |
C62—C61—C6 | 118.88 (12) | C53—C54—C55 | 119.73 (14) |
C66—C61—C6 | 121.52 (12) | C53—C54—H54 | 120.1 |
C52—C51—C56 | 120.26 (13) | C55—C54—H54 | 120.1 |
C52—C51—S1 | 124.17 (11) | C54—C53—C52 | 120.80 (14) |
C56—C51—S1 | 115.57 (10) | C54—C53—H53 | 119.6 |
C56—C55—C54 | 120.22 (13) | C52—C53—H53 | 119.6 |
C56—C55—H55 | 119.9 | C25—C24—C23 | 119.87 (13) |
C54—C55—H55 | 119.9 | C25—C24—H24 | 120.1 |
C23—C22—C21 | 119.97 (13) | C23—C24—H24 | 120.1 |
C23—C22—H22 | 120.0 | C63—C64—C65 | 120.10 (14) |
C21—C22—H22 | 120.0 | C63—C64—H64 | 119.9 |
C25—C26—C21 | 120.17 (13) | C65—C64—H64 | 119.9 |
C25—C26—H26 | 119.9 | C64—C65—C66 | 120.12 (15) |
C21—C26—H26 | 119.9 | C64—C65—H65 | 119.9 |
C63—C62—C61 | 120.10 (14) | C66—C65—H65 | 119.9 |
| | | |
O1—C4—C5—C6 | −179.22 (12) | N1—C6—C61—C62 | 53.60 (17) |
C3—C4—C5—C6 | 2.66 (18) | C5—C6—C61—C62 | −122.86 (14) |
O1—C4—C5—S1 | −6.01 (17) | N1—C6—C61—C66 | −126.42 (14) |
C3—C4—C5—S1 | 175.87 (9) | C5—C6—C61—C66 | 57.13 (18) |
C51—S1—C5—C6 | −106.18 (11) | C53—C52—C51—C56 | 0.7 (2) |
C51—S1—C5—C4 | 80.79 (11) | C53—C52—C51—S1 | −179.42 (12) |
C6—N1—C2—C3 | −0.96 (19) | C5—S1—C51—C52 | 1.27 (14) |
C6—N1—C2—C21 | 174.60 (11) | C5—S1—C51—C56 | −178.87 (11) |
C2—N1—C6—C5 | −3.98 (19) | C26—C21—C22—C23 | −0.5 (2) |
C2—N1—C6—C61 | 179.58 (11) | C2—C21—C22—C23 | −175.69 (13) |
C4—C5—C6—N1 | 3.05 (19) | C22—C21—C26—C25 | −0.1 (2) |
S1—C5—C6—N1 | −169.95 (10) | C2—C21—C26—C25 | 175.10 (13) |
C4—C5—C6—C61 | 179.23 (12) | C66—C61—C62—C63 | −2.0 (2) |
S1—C5—C6—C61 | 6.23 (18) | C6—C61—C62—C63 | 178.01 (13) |
C8—O3—C7—O2 | 0.29 (19) | C62—C61—C66—C65 | 0.6 (2) |
C8—O3—C7—C3 | 175.85 (11) | C6—C61—C66—C65 | −179.39 (13) |
N1—C2—C21—C22 | 42.75 (17) | C61—C62—C63—C64 | 1.9 (2) |
C3—C2—C21—C22 | −141.67 (13) | C54—C55—C56—C51 | −0.2 (2) |
N1—C2—C21—C26 | −132.38 (13) | C52—C51—C56—C55 | −0.7 (2) |
C3—C2—C21—C26 | 43.20 (18) | S1—C51—C56—C55 | 179.47 (11) |
N1—C2—C3—C4 | 6.59 (19) | C21—C22—C23—C24 | 0.9 (2) |
C21—C2—C3—C4 | −168.58 (11) | C7—O3—C8—C9 | 81.25 (15) |
N1—C2—C3—C7 | −170.70 (12) | C21—C26—C25—C24 | 0.3 (2) |
C21—C2—C3—C7 | 14.13 (19) | C56—C55—C54—C53 | 1.0 (2) |
O1—C4—C3—C2 | 174.79 (12) | C55—C54—C53—C52 | −0.9 (2) |
C5—C4—C3—C2 | −7.13 (18) | C51—C52—C53—C54 | 0.1 (2) |
O1—C4—C3—C7 | −7.77 (18) | C26—C25—C24—C23 | 0.0 (2) |
C5—C4—C3—C7 | 170.30 (11) | C22—C23—C24—C25 | −0.6 (2) |
O2—C7—C3—C2 | −147.73 (14) | C62—C63—C64—C65 | −0.4 (2) |
O3—C7—C3—C2 | 36.75 (17) | C63—C64—C65—C66 | −1.0 (2) |
O2—C7—C3—C4 | 34.98 (19) | C61—C66—C65—C64 | 0.9 (2) |
O3—C7—C3—C4 | −140.54 (12) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2 | 0.82 | 2.04 | 2.7450 (16) | 144 |
C23—H23···O2i | 0.93 | 2.59 | 3.3168 (18) | 136 |
C26—H26···O2ii | 0.93 | 2.46 | 3.3446 (17) | 158 |
C65—H65···O3iii | 0.93 | 2.59 | 3.4008 (18) | 146 |
C22—H22···Cg1iii | 0.93 | 2.89 | 3.6647 (15) | 142 |
C8—H8B···Cg2iv | 0.97 | 2.75 | 3.6458 (16) | 154 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x, −y, −z; (iii) −x+1, −y, −z+1; (iv) x+1, y, z. |
(II) ethyl 2,6-bis(4-fluorophenyl)-4-hydroxy-5-(4-methylphenylsulfanyl)pyridine-3-
carboxylate
top
Crystal data top
C27H21F2NO3S | F(000) = 992 |
Mr = 477.52 | Dx = 1.357 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 25 reflections |
a = 12.092 (1) Å | θ = 2.1–25° |
b = 10.489 (1) Å | µ = 0.18 mm−1 |
c = 18.496 (2) Å | T = 293 K |
β = 94.78 (1)° | Block, colourless |
V = 2337.7 (4) Å3 | 0.18 × 0.16 × 0.12 mm |
Z = 4 | |
Data collection top
Nonius MACH3 four-circle diffractometer | 2764 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.020 |
Graphite monochromator | θmax = 25.0°, θmin = 2.1° |
ω scans | h = 0→14 |
Absorption correction: ψ scan (North et al., 1968) | k = −1→12 |
Tmin = 0.992, Tmax = 0.995 | l = −21→21 |
4815 measured reflections | 3 standard reflections every 60 min |
4099 independent reflections | intensity decay: none |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.128 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0654P)2 + 0.8462P] where P = (Fo2 + 2Fc2)/3 |
4097 reflections | (Δ/σ)max = 0.011 |
310 parameters | Δρmax = 0.34 e Å−3 |
0 restraints | Δρmin = −0.41 e Å−3 |
Crystal data top
C27H21F2NO3S | V = 2337.7 (4) Å3 |
Mr = 477.52 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 12.092 (1) Å | µ = 0.18 mm−1 |
b = 10.489 (1) Å | T = 293 K |
c = 18.496 (2) Å | 0.18 × 0.16 × 0.12 mm |
β = 94.78 (1)° | |
Data collection top
Nonius MACH3 four-circle diffractometer | 2764 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.020 |
Tmin = 0.992, Tmax = 0.995 | 3 standard reflections every 60 min |
4815 measured reflections | intensity decay: none |
4099 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.128 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.34 e Å−3 |
4097 reflections | Δρmin = −0.41 e Å−3 |
310 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.69276 (6) | 0.63200 (6) | 0.45788 (4) | 0.0499 (2) | |
F1 | 1.08865 (15) | 0.96844 (16) | 0.58697 (11) | 0.0812 (6) | |
F2 | 0.95802 (16) | −0.01595 (18) | 0.83625 (9) | 0.0817 (6) | |
N1 | 0.86681 (16) | 0.43305 (18) | 0.61503 (10) | 0.0400 (5) | |
O1 | 0.59470 (19) | 0.3728 (2) | 0.46464 (13) | 0.0836 (7) | |
H1 | 0.5591 | 0.3108 | 0.4766 | 0.125* | |
O2 | 0.57232 (17) | 0.14879 (19) | 0.54263 (16) | 0.0892 (8) | |
O3 | 0.74442 (15) | 0.07179 (15) | 0.55407 (10) | 0.0515 (4) | |
C2 | 0.81170 (19) | 0.3213 (2) | 0.61398 (12) | 0.0384 (5) | |
C3 | 0.72390 (19) | 0.2931 (2) | 0.56223 (13) | 0.0417 (6) | |
C4 | 0.68499 (19) | 0.3899 (2) | 0.51355 (13) | 0.0428 (6) | |
C5 | 0.7451 (2) | 0.5055 (2) | 0.51411 (12) | 0.0409 (5) | |
C6 | 0.83688 (19) | 0.5205 (2) | 0.56465 (12) | 0.0378 (5) | |
C7 | 0.6708 (2) | 0.1651 (2) | 0.55316 (15) | 0.0508 (6) | |
C8 | 0.7021 (3) | −0.0583 (2) | 0.54160 (17) | 0.0632 (8) | |
H8A | 0.7596 | −0.1105 | 0.5230 | 0.076* | |
H8B | 0.6395 | −0.0562 | 0.5053 | 0.076* | |
C9 | 0.6671 (3) | −0.1159 (3) | 0.60874 (19) | 0.0764 (9) | |
H9A | 0.7273 | −0.1121 | 0.6460 | 0.115* | |
H9B | 0.6467 | −0.2033 | 0.5997 | 0.115* | |
H9C | 0.6046 | −0.0700 | 0.6242 | 0.115* | |
C21 | 0.8496 (2) | 0.2321 (2) | 0.67337 (12) | 0.0406 (5) | |
C22 | 0.9622 (2) | 0.2186 (2) | 0.69426 (14) | 0.0504 (6) | |
H22 | 1.0135 | 0.2665 | 0.6711 | 0.060* | |
C23 | 0.9993 (2) | 0.1350 (3) | 0.74914 (15) | 0.0594 (7) | |
H23 | 1.0746 | 0.1255 | 0.7627 | 0.071* | |
C24 | 0.9219 (3) | 0.0670 (3) | 0.78258 (13) | 0.0558 (7) | |
C25 | 0.8109 (2) | 0.0782 (3) | 0.76490 (14) | 0.0559 (7) | |
H25 | 0.7604 | 0.0308 | 0.7890 | 0.067* | |
C26 | 0.7751 (2) | 0.1618 (2) | 0.71021 (13) | 0.0515 (6) | |
H26 | 0.6994 | 0.1711 | 0.6978 | 0.062* | |
C51 | 0.7413 (2) | 0.5993 (2) | 0.37167 (14) | 0.0459 (6) | |
C52 | 0.7051 (3) | 0.6812 (3) | 0.31585 (16) | 0.0638 (8) | |
H52 | 0.6557 | 0.7464 | 0.3243 | 0.077* | |
C53 | 0.7421 (3) | 0.6664 (3) | 0.24784 (17) | 0.0693 (8) | |
H53 | 0.7170 | 0.7222 | 0.2110 | 0.083* | |
C54 | 0.8155 (2) | 0.5708 (3) | 0.23299 (15) | 0.0605 (7) | |
C55 | 0.8507 (2) | 0.4909 (3) | 0.28892 (15) | 0.0578 (7) | |
H55 | 0.9003 | 0.4260 | 0.2804 | 0.069* | |
C56 | 0.8147 (2) | 0.5037 (2) | 0.35770 (14) | 0.0525 (6) | |
H56 | 0.8400 | 0.4477 | 0.3944 | 0.063* | |
C57 | 0.8556 (3) | 0.5580 (4) | 0.15784 (17) | 0.0901 (11) | |
H57A | 0.9010 | 0.4832 | 0.1560 | 0.135* | |
H57B | 0.8983 | 0.6319 | 0.1473 | 0.135* | |
H57C | 0.7929 | 0.5508 | 0.1227 | 0.135* | |
C61 | 0.90526 (19) | 0.6398 (2) | 0.56882 (13) | 0.0394 (5) | |
C62 | 0.9225 (2) | 0.7023 (2) | 0.63465 (14) | 0.0509 (6) | |
H62 | 0.8923 | 0.6689 | 0.6752 | 0.061* | |
C63 | 0.9842 (2) | 0.8139 (3) | 0.64111 (16) | 0.0588 (7) | |
H63 | 0.9947 | 0.8566 | 0.6852 | 0.071* | |
C64 | 1.0288 (2) | 0.8590 (2) | 0.58089 (17) | 0.0556 (7) | |
C65 | 1.0169 (2) | 0.7993 (3) | 0.51554 (15) | 0.0541 (7) | |
H65 | 1.0501 | 0.8316 | 0.4759 | 0.065* | |
C66 | 0.9536 (2) | 0.6888 (2) | 0.50955 (14) | 0.0463 (6) | |
H66 | 0.9437 | 0.6471 | 0.4651 | 0.056* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0554 (4) | 0.0366 (3) | 0.0570 (4) | 0.0085 (3) | 0.0009 (3) | 0.0011 (3) |
F1 | 0.0786 (12) | 0.0498 (10) | 0.1151 (15) | −0.0265 (9) | 0.0062 (10) | −0.0027 (9) |
F2 | 0.0986 (14) | 0.0750 (12) | 0.0688 (11) | −0.0021 (10) | −0.0099 (10) | 0.0303 (9) |
N1 | 0.0436 (11) | 0.0365 (10) | 0.0406 (11) | −0.0033 (9) | 0.0074 (8) | −0.0032 (9) |
O1 | 0.0730 (15) | 0.0713 (15) | 0.1023 (18) | −0.0107 (12) | −0.0170 (13) | −0.0001 (13) |
O2 | 0.0464 (12) | 0.0508 (12) | 0.166 (2) | −0.0123 (10) | −0.0206 (13) | 0.0153 (13) |
O3 | 0.0536 (11) | 0.0336 (9) | 0.0675 (12) | −0.0044 (8) | 0.0065 (8) | −0.0055 (8) |
C2 | 0.0389 (13) | 0.0343 (12) | 0.0432 (13) | −0.0011 (10) | 0.0095 (10) | −0.0022 (10) |
C3 | 0.0387 (13) | 0.0353 (12) | 0.0512 (14) | −0.0030 (10) | 0.0054 (11) | −0.0026 (11) |
C4 | 0.0387 (13) | 0.0409 (14) | 0.0483 (14) | 0.0004 (10) | −0.0006 (11) | −0.0046 (11) |
C5 | 0.0436 (13) | 0.0351 (12) | 0.0438 (13) | 0.0010 (10) | 0.0032 (10) | −0.0016 (10) |
C6 | 0.0429 (13) | 0.0330 (12) | 0.0388 (12) | 0.0006 (10) | 0.0105 (10) | −0.0032 (10) |
C7 | 0.0494 (16) | 0.0400 (14) | 0.0619 (17) | −0.0049 (12) | −0.0025 (12) | 0.0064 (12) |
C8 | 0.074 (2) | 0.0335 (14) | 0.082 (2) | −0.0104 (13) | 0.0028 (16) | −0.0039 (13) |
C9 | 0.076 (2) | 0.0472 (17) | 0.108 (3) | −0.0061 (15) | 0.0181 (19) | 0.0077 (17) |
C21 | 0.0476 (14) | 0.0348 (12) | 0.0398 (12) | −0.0032 (10) | 0.0067 (10) | −0.0060 (10) |
C22 | 0.0498 (15) | 0.0475 (14) | 0.0529 (15) | −0.0121 (12) | −0.0014 (12) | 0.0063 (12) |
C23 | 0.0533 (16) | 0.0584 (16) | 0.0640 (17) | −0.0048 (14) | −0.0097 (13) | 0.0095 (14) |
C24 | 0.077 (2) | 0.0460 (15) | 0.0428 (14) | −0.0009 (14) | −0.0026 (13) | 0.0066 (12) |
C25 | 0.0662 (19) | 0.0534 (15) | 0.0503 (15) | −0.0020 (14) | 0.0177 (13) | 0.0104 (13) |
C26 | 0.0512 (15) | 0.0554 (16) | 0.0494 (15) | 0.0022 (13) | 0.0132 (12) | 0.0058 (12) |
C51 | 0.0454 (14) | 0.0402 (13) | 0.0505 (14) | −0.0035 (11) | −0.0059 (11) | 0.0017 (11) |
C52 | 0.0641 (18) | 0.0580 (17) | 0.0684 (19) | 0.0127 (15) | 0.0009 (15) | 0.0128 (15) |
C53 | 0.073 (2) | 0.077 (2) | 0.0564 (18) | 0.0022 (17) | −0.0029 (15) | 0.0220 (15) |
C54 | 0.0522 (16) | 0.0721 (19) | 0.0569 (17) | −0.0122 (15) | 0.0026 (13) | 0.0020 (15) |
C55 | 0.0550 (16) | 0.0576 (17) | 0.0599 (17) | 0.0016 (14) | −0.0008 (13) | −0.0040 (14) |
C56 | 0.0593 (16) | 0.0424 (14) | 0.0542 (15) | 0.0051 (12) | −0.0055 (12) | 0.0016 (12) |
C57 | 0.087 (2) | 0.120 (3) | 0.065 (2) | −0.003 (2) | 0.0163 (18) | 0.010 (2) |
C61 | 0.0370 (12) | 0.0327 (12) | 0.0487 (13) | 0.0013 (10) | 0.0040 (10) | −0.0023 (10) |
C62 | 0.0533 (15) | 0.0480 (15) | 0.0519 (15) | −0.0085 (12) | 0.0085 (12) | −0.0043 (12) |
C63 | 0.0610 (17) | 0.0513 (16) | 0.0635 (18) | −0.0106 (14) | 0.0016 (14) | −0.0172 (14) |
C64 | 0.0476 (15) | 0.0361 (13) | 0.083 (2) | −0.0083 (12) | 0.0029 (14) | 0.0009 (14) |
C65 | 0.0520 (16) | 0.0463 (15) | 0.0653 (18) | −0.0035 (12) | 0.0129 (13) | 0.0085 (13) |
C66 | 0.0489 (14) | 0.0415 (13) | 0.0494 (14) | −0.0018 (11) | 0.0087 (11) | −0.0012 (11) |
Geometric parameters (Å, º) top
S1—C5 | 1.770 (2) | C24—C25 | 1.360 (4) |
S1—C51 | 1.778 (3) | C25—C26 | 1.380 (4) |
F1—C64 | 1.356 (3) | C25—H25 | 0.9300 |
F2—C24 | 1.364 (3) | C26—H26 | 0.9300 |
N1—C6 | 1.336 (3) | C51—C56 | 1.378 (4) |
N1—C2 | 1.347 (3) | C51—C52 | 1.386 (4) |
O1—C4 | 1.371 (3) | C51—CG1 | 1.397 (3) |
O1—H1 | 0.8200 | C52—C53 | 1.379 (4) |
O2—C7 | 1.203 (3) | C52—H52 | 0.9300 |
O3—C7 | 1.322 (3) | C53—C54 | 1.382 (4) |
O3—C8 | 1.468 (3) | C53—H53 | 0.9300 |
C2—C3 | 1.401 (3) | C54—C55 | 1.371 (4) |
C2—C21 | 1.486 (3) | C54—CG1 | 1.405 (3) |
C3—C4 | 1.411 (3) | C54—C57 | 1.516 (4) |
C3—C7 | 1.492 (3) | C55—C56 | 1.385 (4) |
C4—C5 | 1.413 (3) | C55—H55 | 0.9300 |
C5—C6 | 1.399 (3) | C56—H56 | 0.9300 |
C6—C61 | 1.499 (3) | C57—H57A | 0.9600 |
C8—C9 | 1.475 (4) | C57—H57B | 0.9600 |
C8—H8A | 0.9700 | C57—H57C | 0.9600 |
C8—H8B | 0.9700 | C61—C62 | 1.383 (3) |
C9—H9A | 0.9600 | C61—C66 | 1.384 (3) |
C9—H9B | 0.9600 | C62—C63 | 1.387 (4) |
C9—H9C | 0.9600 | C62—H62 | 0.9300 |
C21—C26 | 1.387 (3) | C63—C64 | 1.363 (4) |
C21—C22 | 1.391 (3) | C63—H63 | 0.9300 |
C22—C23 | 1.388 (4) | C64—C65 | 1.358 (4) |
C22—H22 | 0.9300 | C65—C66 | 1.388 (4) |
C23—C24 | 1.364 (4) | C65—H65 | 0.9300 |
C23—H23 | 0.9300 | C66—H66 | 0.9300 |
| | | |
C5—S1—C51 | 104.69 (11) | C21—C26—H26 | 119.3 |
C6—N1—C2 | 118.8 (2) | C56—C51—C52 | 118.7 (3) |
C4—O1—H1 | 109.5 | C56—C51—CG1 | 59.50 (16) |
C7—O3—C8 | 117.4 (2) | C52—C51—CG1 | 59.19 (17) |
N1—C2—C3 | 122.6 (2) | C56—C51—S1 | 125.1 (2) |
N1—C2—C21 | 114.5 (2) | C52—C51—S1 | 116.2 (2) |
C3—C2—C21 | 122.8 (2) | CG1—C51—S1 | 174.78 (18) |
C2—C3—C4 | 118.5 (2) | C53—C52—C51 | 120.2 (3) |
C2—C3—C7 | 124.1 (2) | C53—C52—H52 | 119.9 |
C4—C3—C7 | 117.3 (2) | C51—C52—H52 | 119.9 |
O1—C4—C3 | 122.1 (2) | C52—C53—C54 | 121.7 (3) |
O1—C4—C5 | 119.9 (2) | C52—C53—H53 | 119.1 |
C3—C4—C5 | 117.9 (2) | C54—C53—H53 | 119.1 |
C6—C5—C4 | 118.7 (2) | C55—C54—C53 | 117.2 (3) |
C6—C5—S1 | 122.22 (18) | C55—C54—CG1 | 58.63 (17) |
C4—C5—S1 | 118.73 (18) | C53—C54—CG1 | 58.61 (18) |
N1—C6—C5 | 122.9 (2) | C55—C54—C57 | 122.3 (3) |
N1—C6—C61 | 114.9 (2) | C53—C54—C57 | 120.4 (3) |
C5—C6—C61 | 122.1 (2) | CG1—C54—C57 | 178.8 (3) |
O2—C7—O3 | 123.6 (2) | C54—C55—C56 | 122.1 (3) |
O2—C7—C3 | 123.8 (2) | C54—C55—H55 | 118.9 |
O3—C7—C3 | 112.5 (2) | C56—C55—H55 | 118.9 |
O3—C8—C9 | 111.7 (2) | C51—C56—C55 | 120.0 (2) |
O3—C8—H8A | 109.3 | C51—C56—H56 | 120.0 |
C9—C8—H8A | 109.3 | C55—C56—H56 | 120.0 |
O3—C8—H8B | 109.3 | C54—C57—H57A | 109.5 |
C9—C8—H8B | 109.3 | C54—C57—H57B | 109.5 |
H8A—C8—H8B | 107.9 | H57A—C57—H57B | 109.5 |
C8—C9—H9A | 109.5 | C54—C57—H57C | 109.5 |
C8—C9—H9B | 109.5 | H57A—C57—H57C | 109.5 |
H9A—C9—H9B | 109.5 | H57B—C57—H57C | 109.5 |
C8—C9—H9C | 109.5 | C62—C61—C66 | 118.6 (2) |
H9A—C9—H9C | 109.5 | C62—C61—C6 | 118.9 (2) |
H9B—C9—H9C | 109.5 | C66—C61—C6 | 122.5 (2) |
C26—C21—C22 | 118.1 (2) | C61—C62—C63 | 121.1 (2) |
C26—C21—C2 | 121.7 (2) | C61—C62—H62 | 119.5 |
C22—C21—C2 | 120.3 (2) | C63—C62—H62 | 119.5 |
C23—C22—C21 | 121.1 (2) | C64—C63—C62 | 118.0 (3) |
C23—C22—H22 | 119.5 | C64—C63—H63 | 121.0 |
C21—C22—H22 | 119.5 | C62—C63—H63 | 121.0 |
C24—C23—C22 | 118.0 (3) | F1—C64—C65 | 118.7 (3) |
C24—C23—H23 | 121.0 | F1—C64—C63 | 118.1 (3) |
C22—C23—H23 | 121.0 | C65—C64—C63 | 123.2 (2) |
C25—C24—C23 | 123.1 (3) | C64—C65—C66 | 118.3 (2) |
C25—C24—F2 | 118.7 (3) | C64—C65—H65 | 120.9 |
C23—C24—F2 | 118.2 (3) | C66—C65—H65 | 120.9 |
C24—C25—C26 | 118.3 (2) | C61—C66—C65 | 120.9 (2) |
C24—C25—H25 | 120.9 | C61—C66—H66 | 119.6 |
C26—C25—H25 | 120.9 | C65—C66—H66 | 119.6 |
C25—C26—C21 | 121.4 (3) | C51—CG1—C54 | 179.74 (18) |
C25—C26—H26 | 119.3 | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2 | 0.82 | 2.09 | 2.782 (3) | 142 |
C57—H57C···F1i | 0.96 | 2.51 | 3.393 (4) | 153 |
C22—H22···Cg1ii | 0.93 | 2.97 | 3.749 (3) | 143 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) −x+2, −y+1, −z+1. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C26H21NO3S | C27H21F2NO3S |
Mr | 427.50 | 477.52 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, P21/n |
Temperature (K) | 105 | 293 |
a, b, c (Å) | 10.3728 (2), 17.1008 (4), 12.9444 (3) | 12.092 (1), 10.489 (1), 18.496 (2) |
β (°) | 111.041 (1) | 94.78 (1) |
V (Å3) | 2143.02 (8) | 2337.7 (4) |
Z | 4 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.18 | 0.18 |
Crystal size (mm) | 0.28 × 0.14 × 0.12 | 0.18 × 0.16 × 0.12 |
|
Data collection |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer | Nonius MACH3 four-circle diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1998) | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.97, 0.979 | 0.992, 0.995 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 32101, 5325, 4855 | 4815, 4099, 2764 |
Rint | 0.043 | 0.020 |
(sin θ/λ)max (Å−1) | 0.667 | 0.594 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.112, 1.02 | 0.043, 0.128, 1.01 |
No. of reflections | 5325 | 4097 |
No. of parameters | 280 | 310 |
No. of restraints | 1 | 0 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.84, −0.78 | 0.34, −0.41 |
Selected bond lengths (Å) for (I) topS1—C5 | 1.7693 (13) | O3—C8 | 1.4622 (16) |
S1—C51 | 1.7819 (14) | O2—C7 | 1.2216 (16) |
O3—C7 | 1.3350 (16) | | |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2 | 0.82 | 2.04 | 2.7450 (16) | 144 |
C23—H23···O2i | 0.93 | 2.59 | 3.3168 (18) | 136 |
C26—H26···O2ii | 0.93 | 2.46 | 3.3446 (17) | 158 |
C65—H65···O3iii | 0.93 | 2.59 | 3.4008 (18) | 146 |
C22—H22···Cg1iii | 0.93 | 2.89 | 3.6647 (15) | 142 |
C8—H8B···Cg2iv | 0.97 | 2.75 | 3.6458 (16) | 154 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x, −y, −z; (iii) −x+1, −y, −z+1; (iv) x+1, y, z. |
Selected bond lengths (Å) for (II) topS1—C5 | 1.770 (2) | O3—C7 | 1.322 (3) |
S1—C51 | 1.778 (3) | O3—C8 | 1.468 (3) |
O2—C7 | 1.203 (3) | | |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2 | 0.82 | 2.09 | 2.782 (3) | 141.7 |
C57—H57C···F1i | 0.96 | 2.51 | 3.393 (4) | 152.7 |
C22—H22···Cg1ii | 0.93 | 2.97 | 3.749 (3) | 142.8 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) −x+2, −y+1, −z+1. |
Pyridines are of great interest because of the occurrence of their saturated and partially saturated derivatives in biologically active compounds and natural products such as NAD nucleotides, pyridoxol (vitamin B6) and pyridine alkaloids (Balasubramanian & Keay, 1996). Substituted pyridines have also found a number of applications, such as anticorrosion agents, insecticides and as potential drug substances (Keney, 1968; Goodhue, 1967; Cooke et al., 1998). In this context, the synthesis of polysubstituted pyridines has been an active research area for many years in our laboratory. The present work reports the X-ray crystallographic study of two such substituted pyridines, (I) and (II).
The molecular structures of (I) and (II) are shown in Fig. 1 and Fig. 2, respectively, and selected geometric parameters are given in Tables 1 and 3, respectively. In (I) and (II), the pyridine heterocycles are planar; the displacements of the atoms from their mean planes do not exceed 0.043 (2) Å. None of the substituted groups forming a plane is either coplanar with or orthogonal to the pyridine ring. The dihedral angles of the phenylsulfanyl group at C5, the ethoxycarbonyl group at C3 and the phenyl ring at C2 with the pyridine ring are 76.2, 37.8 and 43.7°, respectively, in (I), and 83.6 (1), 46.4 (1) and 39.2 (1)°, respectively, in (II). The phenylsulfanyl group is cis to the phenyl ring at C6, with dihedral angles of 62.6 (1)° in (I) and 70.5 (2)° in (II). The C5—S1 bond [1.769 Å in (I) and 1.770 Å in (II)] is slightly shorter than the C51—S1 bond [1.782 Å in (I) and 1.778 Å in (II)], which may be due to the conjugation of atom S1 with the pyridine ring. Similarly, the C7—O3 bond [1.335 Å in (I) and 1.332 Å in (II)] is longer than the C7—O2 bond [1.222 Å in (I) and 1.203 Å in (II)] and considerably shorter than C8—O3 [1.462 Å in (I) and 1.468 Å in (II)], which demonstrates the conjugation of atom O3 with C7—O2.
The crystal structure of (I) is stabilized by weak C—H···O interactions. The C26—H26···O2 and C65—H65···O3 interactions form cyclic dimers, generating rings of graph-set motifs R22(14) and R22(20), respectively (Etter et al., 1990) (Table 2 and Fig. 3). The intramolecular hydrogen bond found between the hydroxyl and carboxylate moieties (O1—H1···O2) (Table 2 and Fig. 3) generates a graph-set motif S(6). Two weak C—H···π interactions, viz. C22—H22···Cg1i and C8—H8B···Cg2ii (Cg1 and Cg2 are the centroids of rings C51—C56 and C61—C66, respectively; symmetry codes are given in Table 2) are observed. No π–π interactions or significant aryl–aryl interactions are observed. The molecular packing in the unit cell is shown in Fig. 4.
The crystal structure of (II) is stabilized by a weak C—H···F interaction. This C57—H57C···F1 interaction (Table 4 and Fig. 5) forms a linear chain generating a graph-set motif C(14). The intramolecular hydrogen bond found between the hydroxyl and carboxylate moieties (O1—H1···O2) (Table 4 and Fig. 5) generates a graph-set motif S(6). The supramolecular aggregation is completed by the presence of a weak C—H···π interaction (Table 4; Cg1 is the centroid of the C51–C56 ring). The molecular packing in the unit cell is shown in Fig. 6. The geometry of the C—H···π interaction was obtained from PLATON (Spek, 2003)