The title compound, [CdCl2(C5H5NO)(H2O)]n, represents a chain polymer. Cadmium centers are coordinated in a pseudo-octahedral fashion by four bridging chloro ligands, a pyridine N-oxide ligand and a water molecule.
Supporting information
CCDC reference: 298433
Key indicators
- Single-crystal X-ray study
- T = 268 K
- Mean (C-C) = 0.017 Å
- R factor = 0.049
- wR factor = 0.167
- Data-to-parameter ratio = 19.4
checkCIF/PLATON results
No syntax errors found
Alert level C
RINTA01_ALERT_3_C The value of Rint is greater than 0.10
Rint given 0.118
PLAT020_ALERT_3_C The value of Rint is greater than 0.10 ......... 0.12
PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.30
PLAT342_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 17
PLAT764_ALERT_4_C Overcomplete CIF Bond List Detected (Rep/Expd) . 1.15 Ratio
Alert level G
ABSTM02_ALERT_3_G The ratio of expected to reported Tmax/Tmin(RR') is < 0.90
Tmin and Tmax reported: 0.300 0.790
Tmin(prime) and Tmax expected: 0.343 0.744
RR(prime) = 0.823
Please check that your absorption correction is appropriate.
REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is
correct. If it is not, please give the correct count in the
_publ_section_exptl_refinement section of the submitted CIF.
From the CIF: _diffrn_reflns_theta_max 26.99
From the CIF: _reflns_number_total 1937
Count of symmetry unique reflns 1177
Completeness (_total/calc) 164.57%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 760
Fraction of Friedel pairs measured 0.646
Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
5 ALERT level C = Check and explain
2 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
4 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Bruker, 2001); cell refinement: SMART; data reduction: SAINT-Plus (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: PLATON.
catena-Poly[[aqua(pyridine N-oxide-
κO)cadmium(II)]-di-µ-chloro]
top
Crystal data top
[CdCl2(C5H5NO)(H2O)] | F(000) = 568 |
Mr = 296.42 | Dx = 2.182 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 25 reflections |
a = 6.3241 (9) Å | θ = 8.3–13.9° |
b = 7.415 (4) Å | µ = 2.96 mm−1 |
c = 19.243 (6) Å | T = 268 K |
V = 902.4 (6) Å3 | Platelet, colourless |
Z = 4 | 0.35 × 0.3 × 0.1 mm |
Data collection top
Bruker SMART diffractometer | 1937 independent reflections |
Radiation source: fine-focus sealed tube | 1782 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.118 |
ω scans | θmax = 27.0°, θmin = 2.1° |
Absorption correction: analytical (PLATON; Spek, 2003) | h = −7→7 |
Tmin = 0.3, Tmax = 0.79 | k = −9→9 |
8540 measured reflections | l = −24→24 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | H-atom parameters constrained |
wR(F2) = 0.167 | w = 1/[σ2(Fo2) + (0.0964P)2 + 3.5458P] where P = (Fo2 + 2Fc2)/3 |
S = 1.12 | (Δ/σ)max < 0.001 |
1937 reflections | Δρmax = 3.56 e Å−3 |
100 parameters | Δρmin = −1.55 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 0000 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (15) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cd1 | 0.99666 (9) | 0.06526 (8) | 0.74894 (3) | 0.0237 (2) | |
Cl1 | 1.0676 (3) | 0.3105 (3) | 0.84108 (10) | 0.0283 (4) | |
Cl2 | 0.8452 (3) | 0.3183 (3) | 0.67054 (10) | 0.0290 (4) | |
O1 | 1.3344 (9) | 0.1281 (7) | 0.6998 (3) | 0.0257 (11) | |
N1 | 1.3654 (11) | 0.0722 (9) | 0.6339 (3) | 0.0233 (14) | |
C5 | 1.3268 (18) | 0.1936 (15) | 0.5832 (5) | 0.045 (2) | |
H5 | 1.2804 | 0.3094 | 0.5938 | 0.054* | |
C1 | 1.4263 (17) | −0.0931 (13) | 0.6201 (5) | 0.038 (2) | |
H1 | 1.4533 | −0.1719 | 0.6566 | 0.046* | |
C4 | 1.359 (2) | 0.140 (2) | 0.5147 (5) | 0.060 (3) | |
H4 | 1.3377 | 0.2229 | 0.4789 | 0.071* | |
C3 | 1.421 (2) | −0.0332 (19) | 0.4994 (6) | 0.058 (3) | |
H3 | 1.4412 | −0.0683 | 0.4535 | 0.069* | |
C2 | 1.4512 (18) | −0.1532 (18) | 0.5522 (6) | 0.057 (3) | |
H2 | 1.4880 | −0.2723 | 0.5430 | 0.069* | |
O2 | 0.6539 (9) | 0.0081 (8) | 0.7888 (3) | 0.0309 (13) | |
H1A | 0.5465 | 0.0289 | 0.7639 | 0.037* | |
H1B | 0.6512 | −0.1040 | 0.7811 | 0.037* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cd1 | 0.0246 (4) | 0.0190 (4) | 0.0276 (4) | −0.00002 (15) | 0.0014 (2) | 0.00048 (15) |
Cl1 | 0.0353 (10) | 0.0231 (7) | 0.0266 (8) | 0.0031 (8) | −0.0035 (8) | −0.0002 (8) |
Cl2 | 0.0339 (10) | 0.0211 (7) | 0.0319 (9) | 0.0019 (8) | −0.0061 (7) | −0.0003 (7) |
O1 | 0.020 (3) | 0.031 (3) | 0.026 (3) | 0.000 (2) | 0.002 (2) | −0.002 (2) |
N1 | 0.012 (3) | 0.036 (3) | 0.022 (3) | −0.002 (2) | 0.001 (2) | 0.003 (2) |
C5 | 0.057 (6) | 0.049 (5) | 0.029 (4) | −0.007 (6) | 0.000 (4) | −0.002 (4) |
C1 | 0.032 (5) | 0.042 (5) | 0.041 (5) | 0.015 (4) | 0.004 (4) | −0.004 (4) |
C4 | 0.067 (7) | 0.097 (10) | 0.014 (4) | 0.006 (7) | 0.006 (4) | 0.007 (5) |
C3 | 0.045 (6) | 0.088 (8) | 0.040 (6) | 0.003 (6) | −0.003 (5) | −0.017 (6) |
C2 | 0.033 (6) | 0.074 (7) | 0.064 (7) | 0.003 (5) | 0.008 (5) | −0.025 (6) |
O2 | 0.018 (3) | 0.031 (3) | 0.044 (4) | −0.008 (2) | 0.001 (3) | 0.000 (2) |
Geometric parameters (Å, º) top
Cd1—O2 | 2.339 (6) | C5—C4 | 1.391 (13) |
Cd1—O1 | 2.382 (6) | C5—H5 | 0.9300 |
Cd1—Cl1 | 2.579 (2) | C1—C2 | 1.390 (14) |
Cd1—Cl2 | 2.591 (2) | C1—H1 | 0.9300 |
Cd1—Cl1i | 2.595 (2) | C4—C3 | 1.378 (19) |
Cd1—Cl2i | 2.599 (2) | C4—H4 | 0.9300 |
Cl1—Cd1ii | 2.595 (2) | C3—C2 | 1.365 (19) |
Cl2—Cd1ii | 2.599 (2) | C3—H3 | 0.9300 |
O1—N1 | 1.349 (9) | C2—H2 | 0.9300 |
N1—C1 | 1.312 (11) | O2—H1A | 0.85 |
N1—C5 | 1.349 (12) | O2—H1B | 0.85 |
| | | |
O2—Cd1—O1 | 175.6 (2) | C5—N1—O1 | 116.6 (7) |
O2—Cd1—Cl1 | 93.64 (16) | N1—C5—C4 | 118.0 (11) |
O1—Cd1—Cl1 | 88.80 (14) | N1—C5—H5 | 121.0 |
O2—Cd1—Cl2 | 88.84 (16) | C4—C5—H5 | 121.0 |
O1—Cd1—Cl2 | 87.63 (15) | N1—C1—C2 | 121.5 (10) |
Cl1—Cd1—Cl2 | 87.36 (8) | N1—C1—H1 | 119.2 |
O2—Cd1—Cl1i | 86.67 (16) | C2—C1—H1 | 119.2 |
O1—Cd1—Cl1i | 91.02 (14) | C3—C4—C5 | 120.6 (11) |
Cl1—Cd1—Cl1i | 178.00 (6) | C3—C4—H4 | 119.7 |
Cl2—Cd1—Cl1i | 94.62 (7) | C5—C4—H4 | 119.7 |
O2—Cd1—Cl2i | 91.90 (16) | C2—C3—C4 | 119.4 (10) |
O1—Cd1—Cl2i | 91.69 (15) | C2—C3—H3 | 120.3 |
Cl1—Cd1—Cl2i | 91.15 (7) | C4—C3—H3 | 120.3 |
Cl2—Cd1—Cl2i | 178.37 (6) | C3—C2—C1 | 118.4 (11) |
Cl1i—Cd1—Cl2i | 86.87 (8) | C3—C2—H2 | 120.8 |
Cd1—Cl1—Cd1ii | 91.56 (7) | C1—C2—H2 | 120.8 |
Cd1—Cl2—Cd1ii | 91.19 (7) | Cd1—O2—H1A | 121.7 |
N1—O1—Cd1 | 116.3 (5) | Cd1—O2—H1B | 98.0 |
C1—N1—C5 | 122.1 (8) | H1A—O2—H1B | 93.6 |
C1—N1—O1 | 121.3 (7) | | |
Symmetry codes: (i) −x+2, y−1/2, −z+3/2; (ii) −x+2, y+1/2, −z+3/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1A···O1iii | 0.85 | 1.97 | 2.794 (8) | 167 |
O2—H1B···O1i | 0.85 | 2.02 | 2.827 (8) | 159 |
Symmetry codes: (i) −x+2, y−1/2, −z+3/2; (iii) x−1, y, z. |