Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536813009628/fk2070sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536813009628/fk2070Isup2.hkl | |
MDL mol file https://doi.org/10.1107/S1600536813009628/fk2070Isup3.mol | |
Chemical Markup Language (CML) file https://doi.org/10.1107/S1600536813009628/fk2070Isup4.cml |
CCDC reference: 956724
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.001 Å
- R factor = 0.038
- wR factor = 0.106
- Data-to-parameter ratio = 23.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1
Alert level G PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF ? PLAT128_ALERT_4_G Alternate Setting of Space-group P21/c ....... P21/n PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 61
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 1 ALERT level C = Check. Ensure it is not caused by an omission or oversight 3 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
The present compound was synthesized according to Plutenko et al. (2012):
Synthesis of ethyl 2-[1-(3,5-dimethyl)pyrazolyl]-2-hydroxyiminoacetate: A mixture of ethyl 2-chloro-2-hydroxyiminoacetate synthesized according to Kozikowski et al. (1983) (0.906g, 6 mmol) and 3,5-dimethylpyrazol (1.152g, 12 mmol) in 10 ml of chloroform was left for evaporation in the air overnight. The resulting precipitate was crystallized from water. Yield: 1.12g (88 %).
Synthesis of 2-[1-(3,5-dimethyl)pyrazolyl]-2-hydroxyiminoacetohydrazide: A solution of hydrazine hydrate (0.57 ml, 60%, 10.6 mmol) in water was added to a solution of ethyl 2-[1-(3,5-dimethyl)pyrazolyl]-2-hydroxyiminoacetate (1.12g, 5.3 mmol) in methanol (30 ml). The resulting mixture was heating under reflux for 1.5 hours. After that solvent was evaporated and product was crystallized from methanol. Yield 0.5g (48 %).
Synthesis of 2-[1-(3,5-dimethyl)pyrazolyl]-2-hydroxyimino-N'-[1-(2-pyridyl)ethylidene]acetohydrazide: A solution of 2-[1-(3,5-dimethyl)pyrazolyl]-2-hydroxyiminoacetohydrazide (0.5g, 2.54 mmol) in methanol (30 ml) was treated with 2-acetylpyridine (0.307g, 2.54 mmol) and the mixture was heated under reflux for 3 hours. After that the solvent was evaporated in vacuum and the product was crystallized from methanol. Yield 0.65g (85 %).
OH, NH and CH3 hydrogen atoms were located from difference Fourier maps, other hydrogen atoms were positioned geometrically and all but H(N) and H(O) were refined at idealized positions riding on the parent atoms, with C—H = 0.95–0.98 Å, and Uiso = 1.2–1.5 Ueq(parent atom). H(N) and H(O) atoms were refined freely with Uiso(H) = 1.2Ueq(N) or 1.5Ueq(O). All CH3 hydrogen atoms were allowed to rotate but not to tip. The highest peak is located 0.74 Å from atom C9 and the deepest hole is located 1.03 Å from atom N4.
Oximes are one of the most efficient bridging ligands class. Polydentate ligands containing both oxime and other donor functions are of special interest due to their potential for the bridging coordination modes and mediation of strong magnetic superexchange between metal ions (Penkova et al., 2009; Kanderal et al., 2005; Moroz et al., 2010). Oxime ligands having the pyridyl groups in the molecule have been used in the preparation of complexes with a variety of transition metals, binding to metals in different modes most commonly as chelates or serving as bridge to metals, and the resulting species have been employed in molecular magnetism and supramolecular chemistry (Moroz et al., 2010, 2012). Herein we report a second polymorph of 2-[1-(3,5-dimethyl)pyrazolyl]-2-hydroxyimino-N'-[1-(2-pyridyl)ethylidene] acetohydrazide (II) (Fig. 1). In comparison, the first polymorph I described previously (Plutenko et al., 2012), crystallized in monoclinic space group Cc, Z = 4, while the title compound II crystallized in space group P21/n with Z = 8 (Fig. 1).
Bond lengths N-N', N-C and C-O of the amide group are 1.3693 (10), 1.3589 (11) and 1.2162 (11) respectively for molecule A and 1.3705 (11), 1.3603 (11) and 1.2156 (11) respectively for molecule B. Such bond lengths are typical for the protonated amide groups (Kanderal et al., 2005). The oxime group is situated in anti- position to the amide group which was shown earlier in the structures of the amide derivatives of 2-hydroxyiminopropanoic acid (Onindo et al., 1995; Sliva et al., 1997; Fritsky et al., 2006). The NC(=NOH)C(O)NH fragment deviates from planarity because of a twist between the oxime and the amide groups about the C(8)-C9 and C(22)-C(23) bonds; the O(1)-C(8)-C(9)-N(3) and O(22)-C(23)-C(9)-N(8) torsion angles are -175.953 (2)° and 164.073 (2)°. The bond lengths N-O and C-N of the oxime group are 1.3615 (9) and 1.2836 (11) Å respectively for A and 1.3645 (10) and 1.2819 (11) Å respectively for B. The bond lengths and angles within the oxime groups are normal and comparable to those in the related structures (Świątek-Kozłowska et al., 2000; Mokhir et al., 2002; Fritsky et al., 1998). The C=N and N—O bond lengths in the oxime moiety of the molecule clearly indicates that the oxime group exists in the nitroso rather than in the isonitroso form (Duda et al., 1997; Kanderal et al., 2005; Fritsky et al., 2004).
The C-C, C-N and N-N' (1,331 (0) – 1,409 (0) Å) bond lengths in the pyrazole ring exhibit normal values (Penkova et al., 2010). The angles C-C'-C'', C-N-C', N-C-C' and N-N'-C are near 108°. The pyrazole ring deviates from the plane formed by other atoms of ligand molecule. The N(4)-C(9)-N(5)-N(6) and torsion angles are -103.589 (2) and 105.359 (2)° respectively. The C-N and C-C bond lengths in the pyridine rings are normal for 2-substituted pyridine derivatives (Fritsky et al., 2000; Krämer et al., 2000; Strotmeyer et al., 2003).
In the crystal packing both molecules A and B are each connected by N-H···N hydrogen bonds, where the oxime nitrogen acts as donor and the pyrazole nitrogen atom acts as acceptor (Table 1). Thus, zig-zag supramolecular chains along b-axis are formed.
For uses of oxime ligands, see: Penkova et al. (2009); Kanderal et al. (2005). For uses of oximes having additional donor functions as versatile ligands, see: Fritsky et al. (1998, 2004, 2006), Kanderal et al. (2005), Onindo et al. (1995); Sliva et al. (1997). For related structures, see: Duda et al. (1997); Kanderal et al. (2005); Krämer & Fritsky (2000); Moroz et al. (2010, 2012); Sliva et al. (1997); Świątek-Kozłowska et al. (2000); Mokhir et al. (2002); Penkova et al. (2010); Strotmeyer et al. (2003); Fritsky et al. (2000). For structure of the first polymorph, see Plutenko et al. (2012). For the synthesis, see: Kozikowski & Adamczyk (1983).
Data collection: APEX2 (Bruker, 2010); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
C14H16N6O2 | F(000) = 1264 |
Mr = 300.33 | Dx = 1.343 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 9866 reflections |
a = 19.4734 (4) Å | θ = 2.8–31.6° |
b = 7.7679 (2) Å | µ = 0.10 mm−1 |
c = 19.8042 (4) Å | T = 100 K |
β = 97.552 (1)° | Block, colourless |
V = 2969.74 (11) Å3 | 0.39 × 0.33 × 0.28 mm |
Z = 8 |
Bruker Kappa APEXII DUO CCD diffractometer | 9973 independent reflections |
Radiation source: fine-focus sealed tube | 8213 reflections with I > 2σ(I) |
Curved graphite crystal monochromator | Rint = 0.027 |
Detector resolution: 16 pixels mm-1 | θmax = 31.7°, θmin = 1.6° |
φ scans and ω scans with κ offset | h = −28→28 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008) | k = −11→11 |
Tmin = 0.964, Tmax = 0.974 | l = −29→29 |
64574 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.106 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0555P)2 + 0.8835P] where P = (Fo2 + 2Fc2)/3 |
9973 reflections | (Δ/σ)max = 0.001 |
419 parameters | Δρmax = 0.49 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
C14H16N6O2 | V = 2969.74 (11) Å3 |
Mr = 300.33 | Z = 8 |
Monoclinic, P21/n | Mo Kα radiation |
a = 19.4734 (4) Å | µ = 0.10 mm−1 |
b = 7.7679 (2) Å | T = 100 K |
c = 19.8042 (4) Å | 0.39 × 0.33 × 0.28 mm |
β = 97.552 (1)° |
Bruker Kappa APEXII DUO CCD diffractometer | 9973 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008) | 8213 reflections with I > 2σ(I) |
Tmin = 0.964, Tmax = 0.974 | Rint = 0.027 |
64574 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.106 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.49 e Å−3 |
9973 reflections | Δρmin = −0.25 e Å−3 |
419 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.23337 (4) | 0.28795 (10) | 0.54568 (4) | 0.02361 (15) | |
O2 | 0.24501 (3) | 0.03509 (9) | 0.75693 (3) | 0.01915 (13) | |
H2O | 0.2117 (9) | −0.025 (2) | 0.7803 (8) | 0.046 (4)* | |
O3 | 0.45992 (4) | 0.18904 (10) | 0.25984 (4) | 0.02138 (14) | |
O4 | 0.24039 (3) | −0.02793 (9) | 0.25464 (3) | 0.01929 (13) | |
H4O | 0.2170 (9) | −0.087 (2) | 0.2888 (9) | 0.052 (5)* | |
N1 | 0.09028 (4) | 0.25022 (10) | 0.52885 (4) | 0.01688 (14) | |
H2N | 0.1179 (7) | 0.1554 (19) | 0.6202 (7) | 0.030 (4)* | |
N2 | 0.13341 (4) | 0.20263 (11) | 0.58605 (4) | 0.01772 (15) | |
N3 | 0.20653 (4) | 0.08553 (10) | 0.69785 (4) | 0.01612 (14) | |
N4 | 0.31385 (4) | 0.18287 (9) | 0.66691 (4) | 0.01408 (13) | |
N5 | 0.34090 (4) | 0.34130 (10) | 0.68560 (4) | 0.01503 (14) | |
N6 | 0.47175 (4) | 0.22400 (11) | 0.40050 (4) | 0.01828 (15) | |
H7N | 0.3769 (8) | 0.131 (2) | 0.3781 (7) | 0.033 (4)* | |
N7 | 0.41368 (4) | 0.16597 (11) | 0.36033 (4) | 0.01910 (15) | |
N8 | 0.30122 (4) | 0.02189 (10) | 0.29165 (4) | 0.01648 (14) | |
N9 | 0.33140 (4) | 0.11492 (9) | 0.18502 (4) | 0.01428 (13) | |
N10 | 0.31523 (4) | 0.27505 (9) | 0.15885 (4) | 0.01431 (13) | |
N11 | −0.08655 (4) | 0.22180 (11) | 0.46263 (4) | 0.01968 (15) | |
N16 | 0.53482 (4) | 0.25441 (12) | 0.57576 (4) | 0.02314 (17) | |
C1 | 0.00368 (5) | 0.38205 (12) | 0.41941 (4) | 0.01765 (16) | |
H1 | 0.0500 | 0.4235 | 0.4260 | 0.021* | |
C2 | −0.04025 (5) | 0.42371 (13) | 0.36098 (5) | 0.02003 (17) | |
H2 | −0.0242 | 0.4911 | 0.3262 | 0.024* | |
C3 | −0.10829 (5) | 0.36503 (14) | 0.35412 (5) | 0.02119 (18) | |
H3 | −0.1399 | 0.3915 | 0.3147 | 0.025* | |
C4 | −0.12863 (5) | 0.26698 (14) | 0.40633 (5) | 0.02197 (18) | |
H4 | −0.1754 | 0.2292 | 0.4020 | 0.026* | |
C5 | −0.02103 (4) | 0.27821 (12) | 0.46846 (4) | 0.01566 (15) | |
C6 | 0.02508 (4) | 0.22338 (12) | 0.53059 (4) | 0.01642 (16) | |
C7 | −0.00595 (5) | 0.14381 (14) | 0.58873 (5) | 0.02139 (18) | |
H7A | 0.0014 | 0.2204 | 0.6284 | 0.032* | |
H7B | 0.0163 | 0.0326 | 0.6004 | 0.032* | |
H7C | −0.0557 | 0.1266 | 0.5754 | 0.032* | |
C8 | 0.20300 (4) | 0.22472 (11) | 0.58951 (4) | 0.01588 (15) | |
C9 | 0.24134 (4) | 0.16000 (11) | 0.65548 (4) | 0.01431 (15) | |
C10 | 0.40910 (4) | 0.31716 (12) | 0.69744 (4) | 0.01572 (15) | |
C11 | 0.45625 (5) | 0.46298 (13) | 0.72087 (5) | 0.02263 (18) | |
H11A | 0.4290 | 0.5586 | 0.7357 | 0.034* | |
H11B | 0.4807 | 0.5012 | 0.6833 | 0.034* | |
H11C | 0.4900 | 0.4249 | 0.7590 | 0.034* | |
C12 | 0.42576 (4) | 0.14436 (12) | 0.68606 (4) | 0.01676 (16) | |
H12 | 0.4708 | 0.0952 | 0.6904 | 0.020* | |
C13 | 0.36410 (5) | 0.06078 (11) | 0.66743 (4) | 0.01532 (15) | |
C14 | 0.34846 (6) | −0.12230 (12) | 0.64969 (5) | 0.02392 (19) | |
H14A | 0.3254 | −0.1296 | 0.6027 | 0.036* | |
H14B | 0.3180 | −0.1697 | 0.6807 | 0.036* | |
H14C | 0.3917 | −0.1884 | 0.6540 | 0.036* | |
C15 | 0.58299 (5) | 0.37652 (12) | 0.48087 (5) | 0.01906 (17) | |
H15 | 0.5786 | 0.3991 | 0.4334 | 0.023* | |
C16 | 0.64057 (5) | 0.43270 (14) | 0.52371 (5) | 0.02242 (18) | |
H16 | 0.6768 | 0.4924 | 0.5059 | 0.027* | |
C17 | 0.64462 (5) | 0.40039 (15) | 0.59324 (5) | 0.0246 (2) | |
H17 | 0.6834 | 0.4378 | 0.6239 | 0.030* | |
C18 | 0.59051 (5) | 0.31215 (15) | 0.61631 (5) | 0.0256 (2) | |
H18 | 0.5930 | 0.2913 | 0.6638 | 0.031* | |
C19 | 0.53144 (5) | 0.28602 (12) | 0.50876 (5) | 0.01802 (16) | |
C20 | 0.46937 (5) | 0.21770 (12) | 0.46535 (5) | 0.01815 (16) | |
C21 | 0.41019 (5) | 0.14593 (15) | 0.49801 (5) | 0.02440 (19) | |
H21A | 0.3683 | 0.2132 | 0.4836 | 0.037* | |
H21B | 0.4213 | 0.1520 | 0.5477 | 0.037* | |
H21C | 0.4023 | 0.0257 | 0.4841 | 0.037* | |
C22 | 0.41232 (5) | 0.15523 (11) | 0.29161 (4) | 0.01576 (15) | |
C23 | 0.34393 (4) | 0.09303 (11) | 0.25621 (4) | 0.01461 (15) | |
C24 | 0.30610 (4) | 0.25375 (12) | 0.09149 (4) | 0.01495 (15) | |
C25 | 0.28426 (5) | 0.40217 (13) | 0.04578 (5) | 0.02124 (18) | |
H25A | 0.2684 | 0.4966 | 0.0727 | 0.032* | |
H25B | 0.2464 | 0.3662 | 0.0111 | 0.032* | |
H25C | 0.3236 | 0.4411 | 0.0236 | 0.032* | |
C26 | 0.31770 (5) | 0.08076 (12) | 0.07453 (4) | 0.01728 (16) | |
H26 | 0.3155 | 0.0333 | 0.0301 | 0.021* | |
C27 | 0.33293 (5) | −0.00536 (11) | 0.13529 (4) | 0.01654 (16) | |
C28 | 0.34777 (6) | −0.18986 (13) | 0.15142 (6) | 0.0263 (2) | |
H28A | 0.3918 | −0.1995 | 0.1815 | 0.039* | |
H28B | 0.3509 | −0.2533 | 0.1092 | 0.039* | |
H28C | 0.3104 | −0.2383 | 0.1742 | 0.039* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0180 (3) | 0.0324 (4) | 0.0200 (3) | −0.0017 (3) | 0.0009 (2) | 0.0084 (3) |
O2 | 0.0143 (3) | 0.0255 (3) | 0.0163 (3) | −0.0025 (2) | −0.0030 (2) | 0.0069 (2) |
O3 | 0.0169 (3) | 0.0272 (3) | 0.0204 (3) | −0.0039 (3) | 0.0040 (2) | −0.0007 (3) |
O4 | 0.0160 (3) | 0.0253 (3) | 0.0161 (3) | −0.0069 (2) | 0.0004 (2) | 0.0022 (2) |
N1 | 0.0141 (3) | 0.0204 (3) | 0.0149 (3) | 0.0017 (3) | −0.0026 (2) | 0.0008 (3) |
N2 | 0.0129 (3) | 0.0239 (4) | 0.0154 (3) | 0.0002 (3) | −0.0019 (3) | 0.0040 (3) |
N3 | 0.0140 (3) | 0.0177 (3) | 0.0155 (3) | −0.0008 (3) | −0.0022 (2) | 0.0023 (3) |
N4 | 0.0114 (3) | 0.0138 (3) | 0.0166 (3) | −0.0002 (2) | 0.0003 (2) | 0.0001 (3) |
N5 | 0.0129 (3) | 0.0145 (3) | 0.0173 (3) | −0.0012 (2) | 0.0005 (2) | −0.0010 (3) |
N6 | 0.0155 (3) | 0.0217 (4) | 0.0167 (3) | −0.0014 (3) | −0.0011 (3) | −0.0006 (3) |
N7 | 0.0158 (3) | 0.0260 (4) | 0.0152 (3) | −0.0046 (3) | 0.0007 (3) | −0.0001 (3) |
N8 | 0.0152 (3) | 0.0177 (3) | 0.0161 (3) | −0.0020 (3) | 0.0005 (3) | 0.0012 (3) |
N9 | 0.0167 (3) | 0.0135 (3) | 0.0129 (3) | −0.0001 (2) | 0.0025 (2) | 0.0001 (2) |
N10 | 0.0146 (3) | 0.0148 (3) | 0.0135 (3) | 0.0014 (2) | 0.0016 (2) | 0.0007 (2) |
N11 | 0.0137 (3) | 0.0266 (4) | 0.0181 (3) | −0.0003 (3) | −0.0002 (3) | −0.0005 (3) |
N16 | 0.0203 (4) | 0.0316 (4) | 0.0172 (3) | 0.0015 (3) | 0.0009 (3) | −0.0005 (3) |
C1 | 0.0149 (4) | 0.0220 (4) | 0.0155 (4) | 0.0001 (3) | 0.0001 (3) | −0.0009 (3) |
C2 | 0.0201 (4) | 0.0246 (4) | 0.0148 (4) | 0.0016 (3) | 0.0001 (3) | −0.0002 (3) |
C3 | 0.0176 (4) | 0.0294 (5) | 0.0152 (4) | 0.0043 (3) | −0.0031 (3) | −0.0027 (3) |
C4 | 0.0132 (4) | 0.0321 (5) | 0.0195 (4) | 0.0000 (3) | −0.0020 (3) | −0.0028 (4) |
C5 | 0.0132 (4) | 0.0186 (4) | 0.0146 (3) | 0.0022 (3) | −0.0002 (3) | −0.0022 (3) |
C6 | 0.0146 (4) | 0.0194 (4) | 0.0147 (4) | 0.0015 (3) | −0.0001 (3) | −0.0006 (3) |
C7 | 0.0169 (4) | 0.0288 (5) | 0.0184 (4) | 0.0009 (3) | 0.0021 (3) | 0.0037 (3) |
C8 | 0.0141 (4) | 0.0171 (4) | 0.0155 (3) | 0.0003 (3) | −0.0014 (3) | 0.0007 (3) |
C9 | 0.0118 (3) | 0.0148 (3) | 0.0155 (3) | −0.0005 (3) | −0.0010 (3) | 0.0002 (3) |
C10 | 0.0126 (4) | 0.0201 (4) | 0.0142 (3) | −0.0009 (3) | 0.0009 (3) | 0.0011 (3) |
C11 | 0.0165 (4) | 0.0241 (4) | 0.0263 (4) | −0.0054 (3) | −0.0005 (3) | −0.0009 (4) |
C12 | 0.0130 (4) | 0.0218 (4) | 0.0155 (4) | 0.0033 (3) | 0.0019 (3) | 0.0017 (3) |
C13 | 0.0161 (4) | 0.0164 (4) | 0.0135 (3) | 0.0030 (3) | 0.0021 (3) | 0.0006 (3) |
C14 | 0.0264 (5) | 0.0166 (4) | 0.0287 (5) | 0.0028 (3) | 0.0034 (4) | −0.0036 (3) |
C15 | 0.0176 (4) | 0.0210 (4) | 0.0185 (4) | 0.0024 (3) | 0.0019 (3) | −0.0019 (3) |
C16 | 0.0162 (4) | 0.0257 (4) | 0.0249 (4) | 0.0021 (3) | 0.0010 (3) | −0.0042 (4) |
C17 | 0.0165 (4) | 0.0332 (5) | 0.0229 (4) | 0.0050 (4) | −0.0021 (3) | −0.0070 (4) |
C18 | 0.0216 (4) | 0.0367 (5) | 0.0175 (4) | 0.0052 (4) | −0.0005 (3) | −0.0023 (4) |
C19 | 0.0167 (4) | 0.0204 (4) | 0.0164 (4) | 0.0030 (3) | 0.0004 (3) | −0.0018 (3) |
C20 | 0.0165 (4) | 0.0205 (4) | 0.0172 (4) | 0.0007 (3) | 0.0015 (3) | −0.0002 (3) |
C21 | 0.0223 (4) | 0.0314 (5) | 0.0197 (4) | −0.0058 (4) | 0.0034 (3) | 0.0005 (4) |
C22 | 0.0156 (4) | 0.0151 (4) | 0.0161 (4) | 0.0001 (3) | 0.0004 (3) | 0.0005 (3) |
C23 | 0.0154 (4) | 0.0145 (3) | 0.0138 (3) | 0.0001 (3) | 0.0012 (3) | 0.0008 (3) |
C24 | 0.0116 (3) | 0.0198 (4) | 0.0134 (3) | 0.0001 (3) | 0.0015 (3) | −0.0001 (3) |
C25 | 0.0212 (4) | 0.0259 (4) | 0.0162 (4) | 0.0049 (3) | 0.0012 (3) | 0.0030 (3) |
C26 | 0.0159 (4) | 0.0212 (4) | 0.0149 (4) | −0.0013 (3) | 0.0027 (3) | −0.0037 (3) |
C27 | 0.0158 (4) | 0.0162 (4) | 0.0183 (4) | −0.0019 (3) | 0.0048 (3) | −0.0031 (3) |
C28 | 0.0349 (5) | 0.0151 (4) | 0.0311 (5) | −0.0007 (4) | 0.0126 (4) | −0.0015 (4) |
O1—C8 | 1.2162 (11) | C7—H7B | 0.9800 |
O2—N3 | 1.3615 (9) | C7—H7C | 0.9800 |
O2—H2O | 0.964 (17) | C8—C9 | 1.5035 (12) |
O3—C22 | 1.2156 (11) | C10—C12 | 1.4061 (13) |
O4—N8 | 1.3645 (10) | C10—C11 | 1.4931 (13) |
O4—H4O | 0.978 (18) | C11—H11A | 0.9800 |
N1—C6 | 1.2915 (11) | C11—H11B | 0.9800 |
N1—N2 | 1.3693 (10) | C11—H11C | 0.9800 |
N2—C8 | 1.3589 (11) | C12—C13 | 1.3721 (12) |
N2—H2N | 0.859 (15) | C12—H12 | 0.9500 |
N3—C9 | 1.2836 (11) | C13—C14 | 1.4868 (13) |
N4—C13 | 1.3619 (11) | C14—H14A | 0.9800 |
N4—N5 | 1.3703 (10) | C14—H14B | 0.9800 |
N4—C9 | 1.4115 (11) | C14—H14C | 0.9800 |
N5—C10 | 1.3313 (11) | C15—C16 | 1.3846 (13) |
N6—C20 | 1.2921 (12) | C15—C19 | 1.3974 (13) |
N6—N7 | 1.3705 (11) | C15—H15 | 0.9500 |
N7—C22 | 1.3603 (11) | C16—C17 | 1.3916 (14) |
N7—H7N | 0.882 (15) | C16—H16 | 0.9500 |
N8—C23 | 1.2819 (11) | C17—C18 | 1.3840 (15) |
N9—C27 | 1.3607 (11) | C17—H17 | 0.9500 |
N9—N10 | 1.3683 (10) | C18—H18 | 0.9500 |
N9—C23 | 1.4090 (11) | C19—C20 | 1.4862 (13) |
N10—C24 | 1.3327 (11) | C20—C21 | 1.5010 (13) |
N11—C5 | 1.3396 (11) | C21—H21A | 0.9800 |
N11—C4 | 1.3408 (12) | C21—H21B | 0.9800 |
N16—C18 | 1.3391 (13) | C21—H21C | 0.9800 |
N16—C19 | 1.3425 (12) | C22—C23 | 1.5010 (12) |
C1—C2 | 1.3841 (12) | C24—C26 | 1.4105 (13) |
C1—C5 | 1.3959 (12) | C24—C25 | 1.4927 (13) |
C1—H1 | 0.9500 | C25—H25A | 0.9800 |
C2—C3 | 1.3909 (14) | C25—H25B | 0.9800 |
C2—H2 | 0.9500 | C25—H25C | 0.9800 |
C3—C4 | 1.3834 (14) | C26—C27 | 1.3747 (13) |
C3—H3 | 0.9500 | C26—H26 | 0.9500 |
C4—H4 | 0.9500 | C27—C28 | 1.4884 (13) |
C5—C6 | 1.4872 (12) | C28—H28A | 0.9800 |
C6—C7 | 1.5019 (13) | C28—H28B | 0.9800 |
C7—H7A | 0.9800 | C28—H28C | 0.9800 |
N3—O2—H2O | 102.8 (10) | C13—C12—H12 | 126.8 |
N8—O4—H4O | 102.3 (10) | C10—C12—H12 | 126.8 |
C6—N1—N2 | 115.63 (8) | N4—C13—C12 | 105.97 (8) |
C8—N2—N1 | 120.46 (8) | N4—C13—C14 | 122.66 (8) |
C8—N2—H2N | 117.7 (10) | C12—C13—C14 | 131.37 (8) |
N1—N2—H2N | 121.8 (10) | C13—C14—H14A | 109.5 |
C9—N3—O2 | 114.41 (7) | C13—C14—H14B | 109.5 |
C13—N4—N5 | 111.90 (7) | H14A—C14—H14B | 109.5 |
C13—N4—C9 | 128.04 (8) | C13—C14—H14C | 109.5 |
N5—N4—C9 | 119.83 (7) | H14A—C14—H14C | 109.5 |
C10—N5—N4 | 105.09 (7) | H14B—C14—H14C | 109.5 |
C20—N6—N7 | 115.45 (8) | C16—C15—C19 | 118.83 (9) |
C22—N7—N6 | 120.46 (8) | C16—C15—H15 | 120.6 |
C22—N7—H7N | 118.1 (10) | C19—C15—H15 | 120.6 |
N6—N7—H7N | 121.4 (10) | C15—C16—C17 | 119.05 (9) |
C23—N8—O4 | 114.08 (7) | C15—C16—H16 | 120.5 |
C27—N9—N10 | 112.07 (7) | C17—C16—H16 | 120.5 |
C27—N9—C23 | 128.60 (8) | C18—C17—C16 | 117.99 (9) |
N10—N9—C23 | 119.32 (7) | C18—C17—H17 | 121.0 |
C24—N10—N9 | 105.08 (7) | C16—C17—H17 | 121.0 |
C5—N11—C4 | 117.20 (8) | N16—C18—C17 | 124.04 (9) |
C18—N16—C19 | 117.51 (9) | N16—C18—H18 | 118.0 |
C2—C1—C5 | 119.02 (8) | C17—C18—H18 | 118.0 |
C2—C1—H1 | 120.5 | N16—C19—C15 | 122.57 (9) |
C5—C1—H1 | 120.5 | N16—C19—C20 | 115.91 (8) |
C1—C2—C3 | 118.76 (9) | C15—C19—C20 | 121.53 (8) |
C1—C2—H2 | 120.6 | N6—C20—C19 | 115.39 (8) |
C3—C2—H2 | 120.6 | N6—C20—C21 | 124.91 (8) |
C4—C3—C2 | 118.04 (8) | C19—C20—C21 | 119.70 (8) |
C4—C3—H3 | 121.0 | C20—C21—H21A | 109.5 |
C2—C3—H3 | 121.0 | C20—C21—H21B | 109.5 |
N11—C4—C3 | 124.19 (9) | H21A—C21—H21B | 109.5 |
N11—C4—H4 | 117.9 | C20—C21—H21C | 109.5 |
C3—C4—H4 | 117.9 | H21A—C21—H21C | 109.5 |
N11—C5—C1 | 122.73 (8) | H21B—C21—H21C | 109.5 |
N11—C5—C6 | 116.25 (8) | O3—C22—N7 | 126.06 (8) |
C1—C5—C6 | 121.02 (8) | O3—C22—C23 | 121.19 (8) |
N1—C6—C5 | 114.87 (8) | N7—C22—C23 | 112.74 (7) |
N1—C6—C7 | 125.65 (8) | N8—C23—N9 | 124.08 (8) |
C5—C6—C7 | 119.48 (8) | N8—C23—C22 | 118.86 (8) |
C6—C7—H7A | 109.5 | N9—C23—C22 | 117.06 (7) |
C6—C7—H7B | 109.5 | N10—C24—C26 | 110.62 (8) |
H7A—C7—H7B | 109.5 | N10—C24—C25 | 120.07 (8) |
C6—C7—H7C | 109.5 | C26—C24—C25 | 129.28 (8) |
H7A—C7—H7C | 109.5 | C24—C25—H25A | 109.5 |
H7B—C7—H7C | 109.5 | C24—C25—H25B | 109.5 |
O1—C8—N2 | 126.18 (8) | H25A—C25—H25B | 109.5 |
O1—C8—C9 | 121.51 (8) | C24—C25—H25C | 109.5 |
N2—C8—C9 | 112.31 (7) | H25A—C25—H25C | 109.5 |
N3—C9—N4 | 123.70 (8) | H25B—C25—H25C | 109.5 |
N3—C9—C8 | 118.31 (8) | C27—C26—C24 | 106.14 (8) |
N4—C9—C8 | 117.99 (7) | C27—C26—H26 | 126.9 |
N5—C10—C12 | 110.61 (8) | C24—C26—H26 | 126.9 |
N5—C10—C11 | 120.42 (8) | N9—C27—C26 | 106.07 (8) |
C12—C10—C11 | 128.96 (8) | N9—C27—C28 | 121.87 (8) |
C10—C11—H11A | 109.5 | C26—C27—C28 | 132.05 (9) |
C10—C11—H11B | 109.5 | C27—C28—H28A | 109.5 |
H11A—C11—H11B | 109.5 | C27—C28—H28B | 109.5 |
C10—C11—H11C | 109.5 | H28A—C28—H28B | 109.5 |
H11A—C11—H11C | 109.5 | C27—C28—H28C | 109.5 |
H11B—C11—H11C | 109.5 | H28A—C28—H28C | 109.5 |
C13—C12—C10 | 106.42 (8) | H28B—C28—H28C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2O···N5i | 0.964 (17) | 1.664 (17) | 2.6193 (10) | 170.1 (16) |
O4—H4O···N10ii | 0.978 (18) | 1.670 (18) | 2.6341 (10) | 167.8 (17) |
Symmetry codes: (i) −x+1/2, y−1/2, −z+3/2; (ii) −x+1/2, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C14H16N6O2 |
Mr | 300.33 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 19.4734 (4), 7.7679 (2), 19.8042 (4) |
β (°) | 97.552 (1) |
V (Å3) | 2969.74 (11) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.39 × 0.33 × 0.28 |
Data collection | |
Diffractometer | Bruker Kappa APEXII DUO CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2008) |
Tmin, Tmax | 0.964, 0.974 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 64574, 9973, 8213 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.739 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.106, 1.03 |
No. of reflections | 9973 |
No. of parameters | 419 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.49, −0.25 |
Computer programs: APEX2 (Bruker, 2010), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2O···N5i | 0.964 (17) | 1.664 (17) | 2.6193 (10) | 170.1 (16) |
O4—H4O···N10ii | 0.978 (18) | 1.670 (18) | 2.6341 (10) | 167.8 (17) |
Symmetry codes: (i) −x+1/2, y−1/2, −z+3/2; (ii) −x+1/2, y−1/2, −z+1/2. |
Oximes are one of the most efficient bridging ligands class. Polydentate ligands containing both oxime and other donor functions are of special interest due to their potential for the bridging coordination modes and mediation of strong magnetic superexchange between metal ions (Penkova et al., 2009; Kanderal et al., 2005; Moroz et al., 2010). Oxime ligands having the pyridyl groups in the molecule have been used in the preparation of complexes with a variety of transition metals, binding to metals in different modes most commonly as chelates or serving as bridge to metals, and the resulting species have been employed in molecular magnetism and supramolecular chemistry (Moroz et al., 2010, 2012). Herein we report a second polymorph of 2-[1-(3,5-dimethyl)pyrazolyl]-2-hydroxyimino-N'-[1-(2-pyridyl)ethylidene] acetohydrazide (II) (Fig. 1). In comparison, the first polymorph I described previously (Plutenko et al., 2012), crystallized in monoclinic space group Cc, Z = 4, while the title compound II crystallized in space group P21/n with Z = 8 (Fig. 1).
Bond lengths N-N', N-C and C-O of the amide group are 1.3693 (10), 1.3589 (11) and 1.2162 (11) respectively for molecule A and 1.3705 (11), 1.3603 (11) and 1.2156 (11) respectively for molecule B. Such bond lengths are typical for the protonated amide groups (Kanderal et al., 2005). The oxime group is situated in anti- position to the amide group which was shown earlier in the structures of the amide derivatives of 2-hydroxyiminopropanoic acid (Onindo et al., 1995; Sliva et al., 1997; Fritsky et al., 2006). The NC(=NOH)C(O)NH fragment deviates from planarity because of a twist between the oxime and the amide groups about the C(8)-C9 and C(22)-C(23) bonds; the O(1)-C(8)-C(9)-N(3) and O(22)-C(23)-C(9)-N(8) torsion angles are -175.953 (2)° and 164.073 (2)°. The bond lengths N-O and C-N of the oxime group are 1.3615 (9) and 1.2836 (11) Å respectively for A and 1.3645 (10) and 1.2819 (11) Å respectively for B. The bond lengths and angles within the oxime groups are normal and comparable to those in the related structures (Świątek-Kozłowska et al., 2000; Mokhir et al., 2002; Fritsky et al., 1998). The C=N and N—O bond lengths in the oxime moiety of the molecule clearly indicates that the oxime group exists in the nitroso rather than in the isonitroso form (Duda et al., 1997; Kanderal et al., 2005; Fritsky et al., 2004).
The C-C, C-N and N-N' (1,331 (0) – 1,409 (0) Å) bond lengths in the pyrazole ring exhibit normal values (Penkova et al., 2010). The angles C-C'-C'', C-N-C', N-C-C' and N-N'-C are near 108°. The pyrazole ring deviates from the plane formed by other atoms of ligand molecule. The N(4)-C(9)-N(5)-N(6) and torsion angles are -103.589 (2) and 105.359 (2)° respectively. The C-N and C-C bond lengths in the pyridine rings are normal for 2-substituted pyridine derivatives (Fritsky et al., 2000; Krämer et al., 2000; Strotmeyer et al., 2003).
In the crystal packing both molecules A and B are each connected by N-H···N hydrogen bonds, where the oxime nitrogen acts as donor and the pyrazole nitrogen atom acts as acceptor (Table 1). Thus, zig-zag supramolecular chains along b-axis are formed.