The main motif within the structure is a lamotrigine dimer stabilized by two ethanol molecules. Here the lamotrigine dimer forms using amines in the ortho position of the triazine group.
Supporting information
CCDC reference: 1826282
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.009 Å
- Disorder in solvent or counterion
- R factor = 0.098
- wR factor = 0.234
- Data-to-parameter ratio = 15.2
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.1 Note
PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.0095 Ang.
PLAT415_ALERT_2_C Short Inter D-H..H-X H5B ..H11A 2.14 Ang.
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 17.311 Check
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 3.357 Check
PLAT934_ALERT_3_C Number of (Iobs-Icalc)/SigmaW > 10 Outliers .... 1 Check
PLAT975_ALERT_2_C Check Calcd Resid. Dens. 1.06A From N1 0.58 eA-3
PLAT975_ALERT_2_C Check Calcd Resid. Dens. 0.97A From O1 0.53 eA-3
PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density. 0 Info
Alert level G
PLAT003_ALERT_2_G Number of Uiso or Uij Restrained non-H Atoms ... 5 Report
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 5 Report
PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large 59.87 Why ?
PLAT128_ALERT_4_G Alternate Setting for Input Space Group C2/c I2/a Note
PLAT178_ALERT_4_G The CIF-Embedded .res File Contains SIMU Records 1 Report
PLAT302_ALERT_4_G Anion/Solvent/Minor-Residue Disorder (Resd 2 ) 67% Note
PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O1 35.4 Degree
PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 48 Note
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 25 Note
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
9 ALERT level C = Check. Ensure it is not caused by an omission or oversight
9 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
8 ALERT type 2 Indicator that the structure model may be wrong or deficient
5 ALERT type 3 Indicator that the structure quality may be low
4 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
Data collection: APEX2 (Bruker, 2015); cell refinement: SAINT (Bruker, 2015); data reduction: SAINT (Bruker, 2015); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL (Sheldrick, 2015b); molecular graphics: Olex2 (Dolomanov et al., 2009); software used to prepare material for publication: Olex2 (Dolomanov et al., 2009).
Crystal data top
C9H7Cl2N5·C2H6O | F(000) = 1248 |
Mr = 302.16 | Dx = 1.420 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 21.2458 (15) Å | Cell parameters from 7221 reflections |
b = 10.2320 (8) Å | θ = 2.2–26.4° |
c = 14.8428 (11) Å | µ = 0.46 mm−1 |
β = 118.808 (4)° | T = 100 K |
V = 2827.3 (4) Å3 | Block, colourless |
Z = 8 | 0.39 × 0.25 × 0.13 mm |
Data collection top
Bruker APEXII CCD diffractometer | 2925 independent reflections |
Radiation source: fine-focus sealed tube | 2634 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.053 |
φ and ω scans | θmax = 26.6°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2015) | h = −26→26 |
Tmin = 0.602, Tmax = 0.745 | k = −12→12 |
21376 measured reflections | l = −18→18 |
Refinement top
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.098 | H-atom parameters constrained |
wR(F2) = 0.234 | w = 1/[σ2(Fo2) + 59.8676P] where P = (Fo2 + 2Fc2)/3 |
S = 1.41 | (Δ/σ)max < 0.001 |
2925 reflections | Δρmax = 0.62 e Å−3 |
193 parameters | Δρmin = −0.87 e Å−3 |
48 restraints | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. The occupancies of the disordered atoms in the ethanol were refined with
their sum set to equal 1. Restraints were applied to maintain sensible
thermal and geometric parameters.
The diffraction data showed slight splitting of some peaks but twinning
could not be sensibly separated and modelled. However this may explain
the large K values, slightly high second weight paramater and Fobs greater
than Fcalc. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
Cl1 | 0.16117 (9) | 0.41684 (18) | 0.10486 (12) | 0.0254 (4) | |
Cl2 | 0.06655 (8) | 0.37527 (18) | 0.21033 (13) | 0.0256 (4) | |
O1 | 0.4106 (2) | 0.2925 (5) | 0.4111 (3) | 0.0192 (10) | |
H1A | 0.397808 | 0.357810 | 0.371958 | 0.029* | 0.484 (14) |
H1B | 0.398027 | 0.358121 | 0.372284 | 0.029* | 0.516 (14) |
N3 | 0.3251 (3) | 0.6534 (5) | 0.1015 (4) | 0.0136 (10) | |
N4 | 0.2195 (3) | 0.7095 (5) | 0.0967 (4) | 0.0145 (11) | |
H4A | 0.208617 | 0.757236 | 0.041803 | 0.017* | |
H4B | 0.189512 | 0.705023 | 0.121767 | 0.017* | |
N1 | 0.3666 (3) | 0.5147 (6) | 0.2792 (4) | 0.0177 (11) | |
N2 | 0.4130 (3) | 0.5288 (6) | 0.2425 (4) | 0.0185 (12) | |
N5 | 0.4347 (3) | 0.6032 (7) | 0.1152 (4) | 0.0293 (15) | |
H5A | 0.422053 | 0.646160 | 0.057650 | 0.035* | |
H5B | 0.477226 | 0.565850 | 0.147585 | 0.035* | |
C6 | 0.2549 (3) | 0.5427 (6) | 0.2790 (4) | 0.0144 (12) | |
C8 | 0.2808 (3) | 0.6445 (6) | 0.1415 (4) | 0.0133 (12) | |
C7 | 0.3022 (3) | 0.5648 (6) | 0.2321 (4) | 0.0142 (12) | |
C4 | 0.2351 (4) | 0.5649 (7) | 0.4253 (5) | 0.0191 (13) | |
H4 | 0.251372 | 0.593442 | 0.493888 | 0.023* | |
C3 | 0.1697 (3) | 0.5029 (7) | 0.3727 (5) | 0.0193 (14) | |
H3 | 0.140279 | 0.491009 | 0.404086 | 0.023* | |
C2 | 0.1470 (3) | 0.4581 (7) | 0.2738 (5) | 0.0176 (13) | |
C9 | 0.3894 (3) | 0.5948 (7) | 0.1536 (5) | 0.0189 (13) | |
C5 | 0.2772 (3) | 0.5859 (7) | 0.3788 (5) | 0.0188 (13) | |
H5 | 0.321851 | 0.630185 | 0.415469 | 0.023* | |
C1 | 0.1893 (3) | 0.4782 (6) | 0.2273 (5) | 0.0152 (12) | |
C10B | 0.4570 (8) | 0.2138 (16) | 0.3909 (13) | 0.024 (3) | 0.484 (14) |
H10A | 0.435281 | 0.197369 | 0.316042 | 0.029* | 0.484 (14) |
H10B | 0.464411 | 0.128524 | 0.426119 | 0.029* | 0.484 (14) |
C11B | 0.5275 (8) | 0.2819 (16) | 0.4283 (14) | 0.030 (4) | 0.484 (14) |
H11A | 0.519935 | 0.365998 | 0.393000 | 0.045* | 0.484 (14) |
H11B | 0.559689 | 0.227634 | 0.414026 | 0.045* | 0.484 (14) |
H11C | 0.549146 | 0.296685 | 0.502588 | 0.045* | 0.484 (14) |
C10A | 0.4866 (8) | 0.2617 (17) | 0.4439 (12) | 0.030 (3) | 0.516 (14) |
H10C | 0.500914 | 0.183860 | 0.489087 | 0.036* | 0.516 (14) |
H10D | 0.516983 | 0.335764 | 0.484496 | 0.036* | 0.516 (14) |
C11A | 0.5000 (8) | 0.2356 (15) | 0.3545 (12) | 0.030 (3) | 0.516 (14) |
H11D | 0.466604 | 0.168389 | 0.310075 | 0.045* | 0.516 (14) |
H11E | 0.549503 | 0.205101 | 0.380438 | 0.045* | 0.516 (14) |
H11F | 0.492715 | 0.316205 | 0.315082 | 0.045* | 0.516 (14) |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0342 (9) | 0.0289 (9) | 0.0201 (8) | −0.0150 (7) | 0.0189 (7) | −0.0098 (7) |
Cl2 | 0.0144 (7) | 0.0370 (10) | 0.0260 (8) | −0.0077 (7) | 0.0102 (6) | 0.0040 (7) |
O1 | 0.017 (2) | 0.024 (2) | 0.020 (2) | 0.0066 (18) | 0.0105 (18) | 0.0100 (19) |
N3 | 0.010 (2) | 0.018 (3) | 0.011 (2) | 0.003 (2) | 0.004 (2) | 0.004 (2) |
N4 | 0.011 (2) | 0.020 (3) | 0.012 (2) | 0.005 (2) | 0.006 (2) | 0.007 (2) |
N1 | 0.016 (3) | 0.023 (3) | 0.016 (3) | 0.001 (2) | 0.010 (2) | 0.003 (2) |
N2 | 0.010 (2) | 0.031 (3) | 0.015 (3) | 0.006 (2) | 0.007 (2) | 0.008 (2) |
N5 | 0.017 (3) | 0.056 (4) | 0.019 (3) | 0.017 (3) | 0.012 (2) | 0.018 (3) |
C6 | 0.015 (3) | 0.016 (3) | 0.013 (3) | 0.005 (2) | 0.008 (2) | 0.004 (2) |
C8 | 0.014 (3) | 0.015 (3) | 0.012 (3) | 0.000 (2) | 0.007 (2) | −0.001 (2) |
C7 | 0.009 (3) | 0.019 (3) | 0.014 (3) | 0.000 (2) | 0.006 (2) | 0.000 (2) |
C4 | 0.025 (3) | 0.020 (3) | 0.013 (3) | 0.003 (3) | 0.010 (3) | 0.003 (3) |
C3 | 0.021 (3) | 0.022 (3) | 0.023 (3) | 0.009 (3) | 0.018 (3) | 0.009 (3) |
C2 | 0.014 (3) | 0.021 (3) | 0.019 (3) | −0.001 (3) | 0.009 (3) | 0.002 (3) |
C9 | 0.015 (3) | 0.027 (4) | 0.017 (3) | 0.008 (3) | 0.010 (2) | 0.008 (3) |
C5 | 0.015 (3) | 0.024 (3) | 0.015 (3) | 0.002 (3) | 0.006 (2) | 0.004 (3) |
C1 | 0.019 (3) | 0.015 (3) | 0.012 (3) | 0.003 (2) | 0.009 (2) | 0.002 (2) |
C10B | 0.020 (5) | 0.026 (5) | 0.028 (5) | 0.006 (5) | 0.013 (4) | 0.005 (5) |
C11B | 0.020 (7) | 0.028 (7) | 0.044 (8) | 0.008 (6) | 0.017 (6) | 0.015 (6) |
C10A | 0.017 (5) | 0.039 (6) | 0.031 (5) | 0.007 (5) | 0.011 (4) | 0.013 (5) |
C11A | 0.030 (6) | 0.027 (7) | 0.040 (7) | 0.009 (6) | 0.021 (6) | 0.008 (6) |
Geometric parameters (Å, º) top
Cl1—C1 | 1.735 (6) | C8—C7 | 1.446 (8) |
Cl2—C2 | 1.725 (6) | C4—H4 | 0.9500 |
O1—H1A | 0.8400 | C4—C3 | 1.377 (9) |
O1—H1B | 0.8400 | C4—C5 | 1.386 (9) |
O1—C10B | 1.413 (15) | C3—H3 | 0.9500 |
O1—C10A | 1.477 (14) | C3—C2 | 1.384 (9) |
N3—C8 | 1.335 (7) | C2—C1 | 1.387 (8) |
N3—C9 | 1.344 (8) | C5—H5 | 0.9500 |
N4—H4A | 0.8800 | C10B—H10A | 0.9900 |
N4—H4B | 0.8800 | C10B—H10B | 0.9900 |
N4—C8 | 1.322 (8) | C10B—C11B | 1.50 (2) |
N1—N2 | 1.345 (7) | C11B—H11A | 0.9800 |
N1—C7 | 1.304 (8) | C11B—H11B | 0.9800 |
N2—C9 | 1.346 (8) | C11B—H11C | 0.9800 |
N5—H5A | 0.8800 | C10A—H10C | 0.9900 |
N5—H5B | 0.8800 | C10A—H10D | 0.9900 |
N5—C9 | 1.336 (8) | C10A—C11A | 1.51 (2) |
C6—C7 | 1.490 (8) | C11A—H11D | 0.9800 |
C6—C5 | 1.392 (9) | C11A—H11E | 0.9800 |
C6—C1 | 1.391 (9) | C11A—H11F | 0.9800 |
| | | |
C10B—O1—H1A | 109.5 | N5—C9—N2 | 116.5 (6) |
C10A—O1—H1B | 109.5 | C6—C5—H5 | 119.7 |
C8—N3—C9 | 116.9 (5) | C4—C5—C6 | 120.6 (6) |
H4A—N4—H4B | 120.0 | C4—C5—H5 | 119.7 |
C8—N4—H4A | 120.0 | C6—C1—Cl1 | 119.8 (5) |
C8—N4—H4B | 120.0 | C2—C1—Cl1 | 119.2 (5) |
C7—N1—N2 | 121.7 (5) | C2—C1—C6 | 120.9 (6) |
N1—N2—C9 | 116.9 (5) | O1—C10B—H10A | 109.8 |
H5A—N5—H5B | 120.0 | O1—C10B—H10B | 109.8 |
C9—N5—H5A | 120.0 | O1—C10B—C11B | 109.3 (13) |
C9—N5—H5B | 120.0 | H10A—C10B—H10B | 108.3 |
C5—C6—C7 | 119.2 (6) | C11B—C10B—H10A | 109.8 |
C1—C6—C7 | 122.4 (5) | C11B—C10B—H10B | 109.8 |
C1—C6—C5 | 118.3 (6) | C10B—C11B—H11A | 109.5 |
N3—C8—C7 | 118.6 (5) | C10B—C11B—H11B | 109.5 |
N4—C8—N3 | 118.5 (5) | C10B—C11B—H11C | 109.5 |
N4—C8—C7 | 122.9 (5) | H11A—C11B—H11B | 109.5 |
N1—C7—C6 | 117.3 (5) | H11A—C11B—H11C | 109.5 |
N1—C7—C8 | 119.9 (5) | H11B—C11B—H11C | 109.5 |
C8—C7—C6 | 122.7 (5) | O1—C10A—H10C | 109.0 |
C3—C4—H4 | 119.8 | O1—C10A—H10D | 109.0 |
C3—C4—C5 | 120.5 (6) | O1—C10A—C11A | 112.8 (12) |
C5—C4—H4 | 119.8 | H10C—C10A—H10D | 107.8 |
C4—C3—H3 | 120.2 | C11A—C10A—H10C | 109.0 |
C4—C3—C2 | 119.6 (6) | C11A—C10A—H10D | 109.0 |
C2—C3—H3 | 120.2 | C10A—C11A—H11D | 109.5 |
C3—C2—Cl2 | 119.3 (5) | C10A—C11A—H11E | 109.5 |
C3—C2—C1 | 120.0 (6) | C10A—C11A—H11F | 109.5 |
C1—C2—Cl2 | 120.7 (5) | H11D—C11A—H11E | 109.5 |
N3—C9—N2 | 125.6 (5) | H11D—C11A—H11F | 109.5 |
N5—C9—N3 | 117.9 (6) | H11E—C11A—H11F | 109.5 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···N1 | 0.84 | 2.01 | 2.848 (7) | 179 |
N4—H4A···N3i | 0.88 | 2.10 | 2.972 (7) | 172 |
N4—H4B···O1ii | 0.88 | 2.14 | 2.841 (7) | 137 |
N5—H5A···O1iii | 0.88 | 2.16 | 3.014 (7) | 163 |
N5—H5B···N2iv | 0.88 | 2.14 | 2.987 (8) | 161 |
Symmetry codes: (i) −x+1/2, −y+3/2, −z; (ii) −x+1/2, y+1/2, −z+1/2; (iii) x, −y+1, z−1/2; (iv) −x+1, y, −z+1/2. |
Chosen parameters for the comparison of lamotrigine alcohol solvates topStructure | Central dihedral angle (°) | Dimerization motif | Density (g cm-1) |
Methanol disolvate | 63.7 (2) | para | 1.50 |
Ethanol monohydrate | 67.6 (0) | para | 1.49 |
Methanol monosolvate | 80.1 (5) | ortho | 1.45 |
Ethanol solvate (I) | 63.5 (9) | ortho | 1.42 |
Isopropanol solvate | 69.6 (8) | ortho | 1.36 |
Butan-1-ol solvate monohydrate | 71.2 (1) | para | 1.34 |