Vilsmeier formylation of trans-1-(4-methylphenylsulfonyl)-2,5-bis(pyrrol-2-yl)pyrrolidine leads to cleavage of the central ring then a reclosure resulting in the formation of trans-N-[2-formyl-4-(5-formylpyrrol-2-yl)-4,5,6,7-tetrahydroindol-7-yl]toluenesulfonamide, C21H21N3O4S.
Supporting information
CCDC reference: 146069
Data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1993); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: TEXSAN (Molecular Structure Corporation, 1995); program(s) used to solve structure: SIR92 (Altomare et al. 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); software used to prepare material for publication: TEXSAN.
Crystal data top
C21H21N3O4S | F(000) = 864 |
Mr = 411.47 | Dx = 1.398 Mg m−3 |
Orthorhombic, Pna21 | Cu Kα radiation, λ = 1.5418 Å |
Hall symbol: P 2c -2n | Cell parameters from 17 reflections |
a = 11.788 (2) Å | θ = 38.5–39.8° |
b = 6.6204 (16) Å | µ = 1.76 mm−1 |
c = 25.057 (3) Å | T = 293 K |
V = 1955.5 (6) Å3 | Tabular, pink |
Z = 4 | 0.50 × 0.40 × 0.15 mm |
Data collection top
Rigaku AFC5R diffractometer | 1919 reflections with I > 2σ(I) |
Radiation source: Rigaku rotating anode | Rint = 0.000 |
Graphite monochromator | θmax = 79.1°, θmin = 3.5° |
ω–2θ scans | h = 0→14 |
Absorption correction: ψ scans (north et al., 1968) | k = 0→8 |
Tmin = 0.544, Tmax = 0.768 | l = −31→0 |
2102 measured reflections | 3 standard reflections every 150 reflections |
2102 independent reflections | intensity decay: 1.2% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.107 | H-atom parameters constrained |
S = 1.07 | Calculated w = 1/[σ2(Fo2) + (0.065P)2 + 0.3269P] where P = (Fo2 + 2Fc2)/3 |
2102 reflections | (Δ/σ)max = 0.001 |
264 parameters | Δρmax = 0.22 e Å−3 |
1 restraint | Δρmin = −0.20 e Å−3 |
Special details top
Experimental. The scan width was (0.94 + 0.30tanθ)° with an ω scan speed of 8° per minute
(up to 4 scans to achieve I/σ(I) > 10). Stationary background counts were
recorded at each end of the scan, and the scan time:background time ratio was
2:1. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles. Correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.21915 (7) | −0.11439 (13) | 0.40862 (3) | 0.0452 (2) | |
O1 | 0.2935 (2) | −0.2699 (4) | 0.38861 (12) | 0.0599 (7) | |
O2 | 0.1228 (2) | −0.1706 (5) | 0.43971 (11) | 0.0641 (8) | |
O3 | −0.2094 (2) | −0.4180 (4) | 0.25519 (11) | 0.0519 (6) | |
O4 | 0.3506 (4) | −0.0257 (7) | 0.11228 (16) | 0.0953 (13) | |
N1 | 0.1756 (3) | 0.0101 (6) | 0.35761 (11) | 0.0529 (8) | |
H1 | 0.2182 | 0.0078 | 0.3298 | 0.063* | |
N2 | −0.0576 (2) | −0.1086 (4) | 0.30046 (11) | 0.0387 (6) | |
H2 | −0.0721 | −0.1917 | 0.3259 | 0.046* | |
N3 | 0.2003 (2) | 0.2209 (5) | 0.17757 (12) | 0.0462 (7) | |
H3 | 0.2169 | 0.1140 | 0.1954 | 0.055* | |
C1 | 0.0696 (3) | 0.1280 (5) | 0.35373 (14) | 0.0424 (7) | |
H1A | 0.0228 | 0.1041 | 0.3854 | 0.051* | |
C2 | 0.0919 (4) | 0.3553 (6) | 0.34740 (18) | 0.0599 (11) | |
H2A | 0.0207 | 0.4278 | 0.3502 | 0.072* | |
H2B | 0.1409 | 0.4007 | 0.3761 | 0.072* | |
C3 | 0.1474 (4) | 0.4046 (6) | 0.29404 (16) | 0.0553 (9) | |
H3A | 0.2169 | 0.3273 | 0.2905 | 0.066* | |
H3B | 0.1672 | 0.5468 | 0.2932 | 0.066* | |
C4 | 0.0690 (3) | 0.3568 (5) | 0.24688 (16) | 0.0461 (8) | |
H4 | 0.0098 | 0.4607 | 0.2464 | 0.055* | |
C5 | 0.0102 (3) | 0.1553 (5) | 0.25561 (13) | 0.0394 (7) | |
C6 | 0.0069 (3) | 0.0602 (4) | 0.30458 (13) | 0.0376 (6) | |
C7 | −0.0532 (3) | 0.0384 (5) | 0.22032 (14) | 0.0422 (7) | |
H7 | −0.0646 | 0.0649 | 0.1843 | 0.051* | |
C8 | −0.0962 (3) | −0.1252 (5) | 0.24869 (13) | 0.0393 (7) | |
C9 | −0.1691 (3) | −0.2796 (5) | 0.22912 (13) | 0.0434 (7) | |
H9 | −0.1877 | −0.2748 | 0.1931 | 0.052* | |
C10 | 0.1285 (3) | 0.3660 (5) | 0.19395 (15) | 0.0461 (8) | |
C11 | 0.1241 (4) | 0.5107 (7) | 0.15453 (19) | 0.0665 (12) | |
H11 | 0.0806 | 0.6278 | 0.1551 | 0.080* | |
C12 | 0.1959 (4) | 0.4509 (8) | 0.11400 (19) | 0.0679 (12) | |
H12 | 0.2098 | 0.5218 | 0.0826 | 0.082* | |
C13 | 0.2435 (3) | 0.2687 (7) | 0.12794 (14) | 0.0532 (9) | |
C14 | 0.3179 (4) | 0.1401 (9) | 0.09877 (17) | 0.0672 (12) | |
H14 | 0.3439 | 0.1881 | 0.0661 | 0.081* | |
C15 | 0.3036 (3) | 0.0469 (5) | 0.44833 (13) | 0.0409 (7) | |
C16 | 0.4077 (3) | −0.0159 (6) | 0.46530 (15) | 0.0486 (8) | |
H16 | 0.4363 | −0.1404 | 0.4546 | 0.058* | |
C17 | 0.4704 (3) | 0.1085 (7) | 0.49879 (17) | 0.0578 (10) | |
H17 | 0.5409 | 0.0648 | 0.5108 | 0.069* | |
C18 | 0.4309 (3) | 0.2954 (6) | 0.51467 (14) | 0.0502 (8) | |
C19 | 0.3263 (5) | 0.3549 (7) | 0.49646 (19) | 0.0701 (13) | |
H19 | 0.2986 | 0.4817 | 0.5058 | 0.084* | |
C20 | 0.2614 (4) | 0.2302 (8) | 0.46457 (19) | 0.0705 (13) | |
H20 | 0.1892 | 0.2703 | 0.4541 | 0.085* | |
C21 | 0.4998 (5) | 0.4280 (8) | 0.5517 (2) | 0.0766 (14) | |
H21A | 0.5542 | 0.5033 | 0.5314 | 0.115* | |
H21B | 0.5386 | 0.3450 | 0.5773 | 0.115* | |
H21C | 0.4502 | 0.5197 | 0.5701 | 0.115* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0459 (4) | 0.0519 (4) | 0.0379 (3) | −0.0048 (3) | −0.0023 (4) | −0.0088 (4) |
O1 | 0.0728 (18) | 0.0518 (15) | 0.0550 (14) | 0.0041 (12) | −0.0077 (13) | −0.0121 (12) |
O2 | 0.0577 (16) | 0.0798 (19) | 0.0547 (16) | −0.0191 (15) | 0.0007 (13) | 0.0010 (15) |
O3 | 0.0545 (14) | 0.0518 (13) | 0.0496 (13) | −0.0133 (12) | 0.0049 (11) | −0.0079 (12) |
O4 | 0.109 (3) | 0.105 (3) | 0.071 (2) | 0.024 (3) | 0.034 (2) | 0.012 (2) |
N1 | 0.0464 (16) | 0.080 (2) | 0.0322 (13) | 0.0037 (16) | −0.0029 (12) | −0.0086 (14) |
N2 | 0.0389 (13) | 0.0378 (12) | 0.0393 (13) | −0.0030 (10) | 0.0009 (11) | 0.0044 (11) |
N3 | 0.0481 (15) | 0.0498 (16) | 0.0407 (13) | −0.0022 (13) | 0.0025 (12) | 0.0119 (12) |
C1 | 0.0430 (18) | 0.0459 (17) | 0.0382 (15) | −0.0032 (14) | 0.0048 (13) | −0.0064 (14) |
C2 | 0.073 (3) | 0.051 (2) | 0.056 (2) | −0.0121 (19) | 0.013 (2) | −0.0173 (18) |
C3 | 0.064 (2) | 0.0423 (18) | 0.060 (2) | −0.0150 (16) | 0.0084 (19) | −0.0072 (17) |
C4 | 0.0437 (18) | 0.0342 (15) | 0.060 (2) | 0.0010 (13) | 0.0059 (16) | 0.0079 (15) |
C5 | 0.0309 (15) | 0.0405 (15) | 0.0468 (17) | 0.0032 (12) | 0.0026 (13) | 0.0049 (13) |
C6 | 0.0339 (15) | 0.0365 (14) | 0.0425 (16) | 0.0006 (12) | 0.0023 (13) | −0.0002 (13) |
C7 | 0.0369 (15) | 0.0488 (17) | 0.0409 (16) | 0.0040 (14) | −0.0003 (13) | 0.0080 (14) |
C8 | 0.0352 (15) | 0.0427 (16) | 0.0398 (15) | 0.0036 (12) | 0.0001 (12) | −0.0010 (14) |
C9 | 0.0408 (17) | 0.0488 (18) | 0.0406 (16) | 0.0026 (14) | −0.0010 (13) | −0.0059 (15) |
C10 | 0.0412 (17) | 0.0424 (17) | 0.055 (2) | −0.0065 (14) | −0.0029 (15) | 0.0140 (15) |
C11 | 0.064 (2) | 0.060 (2) | 0.075 (3) | 0.0014 (19) | −0.009 (2) | 0.030 (2) |
C12 | 0.068 (3) | 0.080 (3) | 0.056 (2) | −0.012 (2) | −0.004 (2) | 0.032 (2) |
C13 | 0.053 (2) | 0.066 (2) | 0.0406 (16) | −0.0153 (18) | −0.0020 (16) | 0.0137 (17) |
C14 | 0.070 (3) | 0.089 (3) | 0.0426 (19) | −0.018 (2) | 0.0086 (19) | 0.004 (2) |
C15 | 0.0411 (16) | 0.0477 (17) | 0.0340 (14) | −0.0016 (14) | −0.0025 (12) | −0.0062 (13) |
C16 | 0.0474 (18) | 0.053 (2) | 0.0457 (17) | 0.0051 (15) | −0.0062 (15) | 0.0001 (16) |
C17 | 0.0421 (19) | 0.074 (2) | 0.057 (2) | −0.0001 (17) | −0.0123 (17) | 0.002 (2) |
C18 | 0.055 (2) | 0.058 (2) | 0.0381 (16) | −0.0137 (17) | −0.0061 (15) | 0.0017 (15) |
C19 | 0.091 (3) | 0.059 (2) | 0.060 (2) | 0.017 (2) | −0.023 (2) | −0.022 (2) |
C20 | 0.064 (2) | 0.079 (3) | 0.069 (3) | 0.025 (2) | −0.028 (2) | −0.033 (2) |
C21 | 0.089 (3) | 0.080 (3) | 0.061 (3) | −0.026 (3) | −0.020 (2) | −0.008 (2) |
Geometric parameters (Å, º) top
S1—O2 | 1.427 (3) | C5—C7 | 1.392 (5) |
S1—O1 | 1.443 (3) | C7—C8 | 1.392 (5) |
S1—N1 | 1.605 (3) | C7—H7 | 0.9300 |
S1—C15 | 1.767 (3) | C8—C9 | 1.422 (5) |
O3—C9 | 1.222 (4) | C9—H9 | 0.9300 |
O4—C14 | 1.212 (7) | C10—C11 | 1.377 (5) |
N1—C1 | 1.476 (5) | C11—C12 | 1.380 (7) |
N1—H1 | 0.8600 | C11—H11 | 0.9300 |
N2—C6 | 1.356 (4) | C12—C13 | 1.376 (7) |
N2—C8 | 1.379 (4) | C12—H12 | 0.9300 |
N2—H2 | 0.8600 | C13—C14 | 1.423 (7) |
N3—C10 | 1.344 (5) | C14—H14 | 0.9300 |
N3—C13 | 1.381 (5) | C15—C16 | 1.364 (5) |
N3—H3 | 0.8600 | C15—C20 | 1.373 (6) |
C1—C6 | 1.505 (5) | C16—C17 | 1.389 (5) |
C1—C2 | 1.536 (5) | C16—H16 | 0.9300 |
C1—H1A | 0.9800 | C17—C18 | 1.381 (6) |
C2—C3 | 1.524 (6) | C17—H17 | 0.9300 |
C2—H2A | 0.9700 | C18—C19 | 1.372 (6) |
C2—H2B | 0.9700 | C18—C21 | 1.514 (6) |
C3—C4 | 1.533 (6) | C19—C20 | 1.380 (6) |
C3—H3A | 0.9700 | C19—H19 | 0.9300 |
C3—H3B | 0.9700 | C20—H20 | 0.9300 |
C4—C10 | 1.501 (5) | C21—H21A | 0.9600 |
C4—C5 | 1.519 (4) | C21—H21B | 0.9600 |
C4—H4 | 0.9800 | C21—H21C | 0.9600 |
C5—C6 | 1.380 (5) | | |
| | | |
O2—S1—O1 | 119.18 (19) | C5—C7—H7 | 126.2 |
O2—S1—N1 | 108.29 (18) | N2—C8—C7 | 107.3 (3) |
O1—S1—N1 | 106.52 (17) | N2—C8—C9 | 125.5 (3) |
O2—S1—C15 | 107.38 (16) | C7—C8—C9 | 127.1 (3) |
O1—S1—C15 | 106.56 (16) | O3—C9—C8 | 126.1 (3) |
N1—S1—C15 | 108.57 (18) | O3—C9—H9 | 116.9 |
C1—N1—S1 | 126.5 (2) | C8—C9—H9 | 116.9 |
C1—N1—H1 | 116.7 | N3—C10—C11 | 107.5 (4) |
S1—N1—H1 | 116.7 | N3—C10—C4 | 122.3 (3) |
C6—N2—C8 | 108.8 (3) | C11—C10—C4 | 130.1 (4) |
C6—N2—H2 | 125.6 | C10—C11—C12 | 107.8 (4) |
C8—N2—H2 | 125.6 | C10—C11—H11 | 126.1 |
C10—N3—C13 | 110.1 (3) | C12—C11—H11 | 126.1 |
C10—N3—H3 | 124.9 | C13—C12—C11 | 108.3 (4) |
C13—N3—H3 | 124.9 | C13—C12—H12 | 125.8 |
N1—C1—C6 | 108.2 (3) | C11—C12—H12 | 125.8 |
N1—C1—C2 | 112.3 (3) | C12—C13—N3 | 106.2 (4) |
C6—C1—C2 | 107.0 (3) | C12—C13—C14 | 130.2 (4) |
N1—C1—H1A | 109.8 | N3—C13—C14 | 123.6 (4) |
C6—C1—H1A | 109.8 | O4—C14—C13 | 126.4 (4) |
C2—C1—H1A | 109.8 | O4—C14—H14 | 116.8 |
C3—C2—C1 | 112.0 (3) | C13—C14—H14 | 116.8 |
C3—C2—H2A | 109.2 | C16—C15—C20 | 120.2 (3) |
C1—C2—H2A | 109.2 | C16—C15—S1 | 119.9 (3) |
C3—C2—H2B | 109.2 | C20—C15—S1 | 119.8 (3) |
C1—C2—H2B | 109.2 | C15—C16—C17 | 119.1 (4) |
H2A—C2—H2B | 107.9 | C15—C16—H16 | 120.4 |
C2—C3—C4 | 111.9 (3) | C17—C16—H16 | 120.4 |
C2—C3—H3A | 109.2 | C18—C17—C16 | 121.7 (4) |
C4—C3—H3A | 109.2 | C18—C17—H17 | 119.1 |
C2—C3—H3B | 109.2 | C16—C17—H17 | 119.1 |
C4—C3—H3B | 109.2 | C19—C18—C17 | 117.7 (3) |
H3A—C3—H3B | 107.9 | C19—C18—C21 | 121.3 (4) |
C10—C4—C5 | 112.1 (3) | C17—C18—C21 | 121.0 (4) |
C10—C4—C3 | 113.0 (3) | C18—C19—C20 | 121.2 (4) |
C5—C4—C3 | 110.2 (3) | C18—C19—H19 | 119.4 |
C10—C4—H4 | 107.1 | C20—C19—H19 | 119.4 |
C5—C4—H4 | 107.1 | C15—C20—C19 | 120.0 (4) |
C3—C4—H4 | 107.1 | C15—C20—H20 | 120.0 |
C6—C5—C7 | 107.2 (3) | C19—C20—H20 | 120.0 |
C6—C5—C4 | 122.8 (3) | C18—C21—H21A | 109.5 |
C7—C5—C4 | 129.9 (3) | C18—C21—H21B | 109.5 |
N2—C6—C5 | 108.9 (3) | H21A—C21—H21B | 109.5 |
N2—C6—C1 | 125.7 (3) | C18—C21—H21C | 109.5 |
C5—C6—C1 | 125.3 (3) | H21A—C21—H21C | 109.5 |
C8—C7—C5 | 107.7 (3) | H21B—C21—H21C | 109.5 |
C8—C7—H7 | 126.2 | | |
| | | |
O2—S1—N1—C1 | 25.9 (4) | C13—N3—C10—C11 | 0.2 (4) |
O1—S1—N1—C1 | 155.3 (3) | C13—N3—C10—C4 | −179.4 (3) |
C15—S1—N1—C1 | −90.3 (3) | C5—C4—C10—N3 | −50.6 (5) |
S1—N1—C1—C6 | −128.0 (3) | C3—C4—C10—N3 | 74.7 (4) |
S1—N1—C1—C2 | 114.1 (4) | C5—C4—C10—C11 | 129.9 (4) |
N1—C1—C2—C3 | 67.1 (5) | C3—C4—C10—C11 | −104.8 (5) |
C6—C1—C2—C3 | −51.5 (5) | N3—C10—C11—C12 | −0.6 (5) |
C1—C2—C3—C4 | 64.8 (5) | C4—C10—C11—C12 | 178.9 (4) |
C2—C3—C4—C10 | −169.0 (3) | C10—C11—C12—C13 | 0.7 (5) |
C2—C3—C4—C5 | −42.7 (4) | C11—C12—C13—N3 | −0.6 (5) |
C10—C4—C5—C6 | 142.0 (3) | C11—C12—C13—C14 | 176.3 (4) |
C3—C4—C5—C6 | 15.2 (4) | C10—N3—C13—C12 | 0.3 (4) |
C10—C4—C5—C7 | −41.9 (5) | C10—N3—C13—C14 | −176.9 (4) |
C3—C4—C5—C7 | −168.7 (3) | C12—C13—C14—O4 | −174.7 (5) |
C8—N2—C6—C5 | 0.4 (3) | N3—C13—C14—O4 | 1.8 (8) |
C8—N2—C6—C1 | −176.9 (3) | O2—S1—C15—C16 | 112.6 (3) |
C7—C5—C6—N2 | −0.9 (4) | O1—S1—C15—C16 | −16.2 (3) |
C4—C5—C6—N2 | 176.0 (3) | N1—S1—C15—C16 | −130.5 (3) |
C7—C5—C6—C1 | 176.3 (3) | O2—S1—C15—C20 | −63.6 (4) |
C4—C5—C6—C1 | −6.8 (5) | O1—S1—C15—C20 | 167.6 (4) |
N1—C1—C6—N2 | 79.7 (4) | N1—S1—C15—C20 | 53.3 (4) |
C2—C1—C6—N2 | −159.1 (3) | C20—C15—C16—C17 | −0.5 (6) |
N1—C1—C6—C5 | −97.1 (4) | S1—C15—C16—C17 | −176.6 (3) |
C2—C1—C6—C5 | 24.1 (5) | C15—C16—C17—C18 | −1.0 (6) |
C6—C5—C7—C8 | 1.1 (4) | C16—C17—C18—C19 | 0.4 (6) |
C4—C5—C7—C8 | −175.5 (3) | C16—C17—C18—C21 | 179.2 (4) |
C6—N2—C8—C7 | 0.3 (3) | C17—C18—C19—C20 | 1.8 (7) |
C6—N2—C8—C9 | −178.2 (3) | C21—C18—C19—C20 | −177.1 (5) |
C5—C7—C8—N2 | −0.9 (4) | C16—C15—C20—C19 | 2.6 (7) |
C5—C7—C8—C9 | 177.5 (3) | S1—C15—C20—C19 | 178.7 (4) |
N2—C8—C9—O3 | 1.2 (6) | C18—C19—C20—C15 | −3.3 (8) |
C7—C8—C9—O3 | −177.1 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3i | 0.86 | 2.14 | 2.966 (4) | 161 |
N2—H2···O1ii | 0.86 | 2.25 | 2.934 (4) | 137 |
N3—H3···O3i | 0.86 | 2.16 | 2.989 (4) | 161 |
Symmetry codes: (i) x+1/2, −y−1/2, z; (ii) x−1/2, −y−1/2, z. |