In the three isomeric salts, all C
6H
7N
2O
+·C
6HCl
2O
4−, of chloranilic acid (2,5-dichloro-3,6-dihydroxy-1,4-benzoquinone) with 2-, 3- and 4-carbamoylpyridine, namely, 2-carbamoylpyridinium hydrogen chloranilate (systematic name: 2-carbamoylpyridinium 2,5-dichloro-4-hydroxy-3,6-dioxocyclohexa-1,4-dienolate), (I), 3-carbamoylpyridinium hydrogen chloranilate, (II), and 4-carbamoylpyridinium hydrogen chloranilate, (III), acid–base interactions involving H-atom transfer are observed. The shortest interactions between the cation and the anion in (I) and (II) are pyridinium N—H

(O,O) bifurcated hydrogen bonds, which act as the primary intermolecular interaction in each crystal structure. In (III), an amide N—H

(O,O) bifurcated hydrogen bond, which is much weaker than the bifurcated hydrogen bonds in (I) and (II), connects the cation and the anion.
Supporting information
CCDC references: 742175; 742176; 742177
Crystals of (I) and (III) were obtained by slow evaporation from methanol
solutions [40 and 100 ml for (I) and (III), respectively] of chloranilic acid
with picolinamide or isonicotinamide in a 1:1 molar ratio [0.300 g of
chloranilic acid and 0.176 g of picolinamide for (I), and 0.100 g of
chloranilic acid and 0.058 g of isonicotinamide for (III)] at room
temperature. Crystals of (II) were obtained by slow evaporation from a
water–methanol (1:1 v/v) solution (140 ml) of chloranilic acid
(0.302 g) and nicotinamide (0.179 g) at room temperature.
H atoms attached to O and N atoms were found in a difference Fourier map and
refined isotropically (refined O—H and N—H distances are given in Tables
1–3). Other H atoms were treated as riding, with C—H = 0.95 Å and with
Uiso(H) = 1.2Ueq(C). For compounds (II) and (III), the
correct orientations of the structures with respect to the polar-axis
directions were determined by use of the Flack x parameters (Flack,
1983) [0.09 (6) and 0.00 (3) for (II) and (III), respectively]. The Hooft
y parameters (Hooft et al., 2008) were evaluated to be
0.14 (2)
and -0.008 (18), respectively, for (II) and (III).
For all compounds, data collection: PROCESS-AUTO (Rigaku/MSC, 2004); cell refinement: PROCESS-AUTO (Rigaku/MSC, 2004); data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2004) and PLATON (Spek, 2009).
(I) 2-carbamoylpyridinium 2,5-dichloro-4-hydroxy-3,6-dioxocyclohexa-1,4-dienolate
top
Crystal data top
C6H7N2O+·C6HCl2O4− | F(000) = 672.00 |
Mr = 331.11 | Dx = 1.750 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71075 Å |
Hall symbol: -P 2ybc | Cell parameters from 9451 reflections |
a = 9.3420 (5) Å | θ = 3.3–30.0° |
b = 12.4483 (8) Å | µ = 0.54 mm−1 |
c = 11.4167 (7) Å | T = 100 K |
β = 108.8014 (17)° | Platelet, black |
V = 1256.83 (13) Å3 | 0.27 × 0.25 × 0.19 mm |
Z = 4 | |
Data collection top
Rigaku R-AXIS RAPID II diffractometer | 2830 reflections with I > 2σ(I) |
Detector resolution: 10.00 pixels mm-1 | Rint = 0.046 |
ω scans | θmax = 30.0° |
Absorption correction: numerical (ABSCOR; Higashi, 1995) | h = −12→13 |
Tmin = 0.875, Tmax = 0.902 | k = −17→17 |
11008 measured reflections | l = −16→16 |
3596 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0528P)2 + 0.2416P] where P = (Fo2 + 2Fc2)/3 |
3596 reflections | (Δ/σ)max < 0.001 |
206 parameters | Δρmax = 0.48 e Å−3 |
0 restraints | Δρmin = −0.54 e Å−3 |
Crystal data top
C6H7N2O+·C6HCl2O4− | V = 1256.83 (13) Å3 |
Mr = 331.11 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.3420 (5) Å | µ = 0.54 mm−1 |
b = 12.4483 (8) Å | T = 100 K |
c = 11.4167 (7) Å | 0.27 × 0.25 × 0.19 mm |
β = 108.8014 (17)° | |
Data collection top
Rigaku R-AXIS RAPID II diffractometer | 3596 independent reflections |
Absorption correction: numerical (ABSCOR; Higashi, 1995) | 2830 reflections with I > 2σ(I) |
Tmin = 0.875, Tmax = 0.902 | Rint = 0.046 |
11008 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | Δρmax = 0.48 e Å−3 |
3596 reflections | Δρmin = −0.54 e Å−3 |
206 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | 0.47394 (5) | 0.18306 (4) | −0.08442 (4) | 0.02225 (12) | |
Cl2 | 0.44480 (5) | 0.58121 (4) | 0.25351 (4) | 0.02029 (12) | |
O1 | 0.71431 (14) | 0.26018 (11) | 0.14520 (11) | 0.0184 (3) | |
O2 | 0.24147 (14) | 0.35825 (11) | −0.13720 (11) | 0.0185 (3) | |
O3 | 0.23405 (14) | 0.52153 (11) | 0.00192 (12) | 0.0206 (3) | |
O4 | 0.70566 (14) | 0.42813 (11) | 0.28934 (11) | 0.0184 (3) | |
O5 | 1.02131 (15) | 0.48625 (12) | 0.26541 (12) | 0.0224 (3) | |
N1 | 0.96303 (17) | 0.31153 (12) | 0.38111 (14) | 0.0169 (3) | |
N2 | 1.19419 (18) | 0.54872 (14) | 0.44191 (15) | 0.0200 (3) | |
C1 | 0.60070 (19) | 0.31695 (14) | 0.11242 (16) | 0.0148 (3) | |
C2 | 0.47235 (19) | 0.29625 (14) | 0.00183 (16) | 0.0158 (3) | |
C3 | 0.35756 (18) | 0.36800 (14) | −0.03305 (15) | 0.0152 (3) | |
C4 | 0.34676 (19) | 0.46261 (14) | 0.04543 (16) | 0.0155 (3) | |
C5 | 0.46284 (19) | 0.47734 (14) | 0.15914 (15) | 0.0148 (3) | |
C6 | 0.59349 (19) | 0.41393 (14) | 0.19496 (15) | 0.0152 (3) | |
C7 | 1.08111 (18) | 0.37466 (15) | 0.44296 (16) | 0.0153 (3) | |
C8 | 1.1733 (2) | 0.34217 (15) | 0.55865 (16) | 0.0180 (4) | |
H8 | 1.2567 | 0.3851 | 0.6043 | 0.022* | |
C9 | 1.1421 (2) | 0.24578 (15) | 0.60717 (16) | 0.0185 (4) | |
H9 | 1.2052 | 0.2227 | 0.6863 | 0.022* | |
C10 | 1.0200 (2) | 0.18294 (15) | 0.54139 (17) | 0.0194 (4) | |
H10 | 0.9986 | 0.1170 | 0.5742 | 0.023* | |
C11 | 0.9297 (2) | 0.21924 (16) | 0.42613 (17) | 0.0199 (4) | |
H11 | 0.8445 | 0.1785 | 0.3794 | 0.024* | |
C12 | 1.09694 (19) | 0.47626 (15) | 0.37548 (16) | 0.0169 (3) | |
H1 | 0.898 (3) | 0.338 (2) | 0.311 (3) | 0.037 (7)* | |
H2 | 0.186 (3) | 0.417 (2) | −0.138 (3) | 0.042 (8)* | |
H2A | 1.210 (3) | 0.605 (2) | 0.407 (2) | 0.028 (6)* | |
H2B | 1.242 (3) | 0.541 (2) | 0.519 (2) | 0.026 (6)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0244 (2) | 0.0201 (2) | 0.0202 (2) | 0.00393 (17) | 0.00431 (17) | −0.00576 (16) |
Cl2 | 0.0193 (2) | 0.0223 (2) | 0.0184 (2) | 0.00231 (16) | 0.00478 (17) | −0.00651 (16) |
O1 | 0.0182 (6) | 0.0175 (6) | 0.0190 (6) | 0.0024 (5) | 0.0053 (5) | 0.0011 (5) |
O2 | 0.0175 (6) | 0.0195 (7) | 0.0155 (6) | 0.0009 (5) | 0.0010 (5) | −0.0024 (5) |
O3 | 0.0175 (6) | 0.0224 (7) | 0.0192 (6) | 0.0051 (5) | 0.0023 (5) | −0.0007 (5) |
O4 | 0.0159 (6) | 0.0218 (7) | 0.0148 (6) | 0.0006 (5) | 0.0013 (5) | −0.0003 (5) |
O5 | 0.0257 (7) | 0.0233 (7) | 0.0158 (6) | −0.0040 (6) | 0.0033 (5) | 0.0018 (5) |
N1 | 0.0159 (7) | 0.0171 (7) | 0.0156 (6) | −0.0010 (6) | 0.0019 (6) | 0.0002 (6) |
N2 | 0.0236 (8) | 0.0188 (8) | 0.0167 (7) | −0.0036 (6) | 0.0053 (6) | 0.0016 (6) |
C1 | 0.0157 (8) | 0.0150 (8) | 0.0143 (7) | 0.0001 (6) | 0.0056 (6) | 0.0028 (6) |
C2 | 0.0178 (8) | 0.0139 (8) | 0.0152 (7) | 0.0005 (6) | 0.0047 (6) | −0.0022 (6) |
C3 | 0.0150 (8) | 0.0173 (8) | 0.0131 (7) | −0.0014 (6) | 0.0044 (6) | 0.0001 (6) |
C4 | 0.0167 (8) | 0.0153 (8) | 0.0150 (7) | −0.0016 (6) | 0.0059 (6) | 0.0000 (6) |
C5 | 0.0177 (8) | 0.0131 (8) | 0.0137 (7) | 0.0005 (6) | 0.0052 (6) | −0.0023 (6) |
C6 | 0.0157 (8) | 0.0166 (8) | 0.0137 (7) | −0.0014 (6) | 0.0054 (6) | 0.0015 (6) |
C7 | 0.0130 (7) | 0.0175 (8) | 0.0157 (7) | 0.0001 (6) | 0.0049 (6) | −0.0011 (6) |
C8 | 0.0158 (8) | 0.0209 (9) | 0.0155 (7) | −0.0004 (7) | 0.0024 (6) | −0.0027 (7) |
C9 | 0.0205 (9) | 0.0181 (9) | 0.0154 (7) | 0.0017 (7) | 0.0035 (7) | 0.0009 (7) |
C10 | 0.0195 (9) | 0.0195 (9) | 0.0193 (8) | 0.0002 (7) | 0.0063 (7) | 0.0017 (7) |
C11 | 0.0161 (8) | 0.0225 (9) | 0.0195 (8) | −0.0029 (7) | 0.0033 (7) | −0.0004 (7) |
C12 | 0.0162 (8) | 0.0169 (8) | 0.0181 (8) | −0.0007 (6) | 0.0065 (7) | −0.0006 (7) |
Geometric parameters (Å, º) top
Cl1—C2 | 1.7218 (18) | C1—C2 | 1.457 (3) |
Cl2—C5 | 1.7257 (18) | C2—C3 | 1.353 (3) |
O1—C1 | 1.229 (2) | C3—C4 | 1.503 (2) |
O2—C3 | 1.332 (2) | C4—C5 | 1.410 (2) |
O2—H2 | 0.90 (3) | C5—C6 | 1.399 (3) |
O3—C4 | 1.248 (2) | C7—C8 | 1.384 (2) |
O4—C6 | 1.250 (2) | C7—C12 | 1.513 (3) |
O5—C12 | 1.233 (2) | C8—C9 | 1.391 (3) |
N1—C11 | 1.336 (2) | C8—H8 | 0.9500 |
N1—C7 | 1.353 (2) | C9—C10 | 1.388 (3) |
N1—H1 | 0.89 (3) | C9—H9 | 0.9500 |
N2—C12 | 1.330 (2) | C10—C11 | 1.390 (3) |
N2—H2A | 0.84 (2) | C10—H10 | 0.9500 |
N2—H2B | 0.85 (2) | C11—H11 | 0.9500 |
C1—C6 | 1.546 (2) | | |
| | | |
C3—O2—H2 | 104 (2) | O4—C6—C5 | 125.59 (16) |
C11—N1—C7 | 123.41 (16) | C1—C6—C5 | 117.87 (15) |
C11—N1—H1 | 119.0 (17) | O4—C6—C1 | 116.53 (16) |
C7—N1—H1 | 117.1 (17) | N1—C7—C8 | 118.69 (17) |
C12—N2—H2A | 118.8 (17) | N1—C7—C12 | 114.64 (15) |
C12—N2—H2B | 123.1 (17) | C8—C7—C12 | 126.67 (16) |
H2A—N2—H2B | 118 (2) | C7—C8—C9 | 119.08 (16) |
O1—C1—C2 | 123.44 (16) | C7—C8—H8 | 120.5 |
O1—C1—C6 | 117.80 (15) | C9—C8—H8 | 120.5 |
C2—C1—C6 | 118.75 (15) | C10—C9—C8 | 120.79 (16) |
Cl1—C2—C1 | 118.95 (13) | C10—C9—H9 | 119.6 |
Cl1—C2—C3 | 121.60 (14) | C8—C9—H9 | 119.6 |
C1—C2—C3 | 119.42 (16) | C9—C10—C11 | 118.12 (18) |
O2—C3—C2 | 122.87 (16) | C9—C10—H10 | 120.9 |
O2—C3—C4 | 114.33 (15) | C11—C10—H10 | 120.9 |
C2—C3—C4 | 122.75 (15) | N1—C11—C10 | 119.90 (17) |
O3—C4—C3 | 115.70 (15) | N1—C11—H11 | 120.0 |
O3—C4—C5 | 126.17 (16) | C10—C11—H11 | 120.1 |
C3—C4—C5 | 118.13 (16) | O5—C12—N2 | 125.04 (18) |
Cl2—C5—C4 | 118.13 (14) | O5—C12—C7 | 119.02 (16) |
Cl2—C5—C6 | 119.45 (13) | N2—C12—C7 | 115.94 (15) |
C4—C5—C6 | 122.37 (16) | | |
| | | |
O1—C1—C2—Cl1 | 3.3 (3) | C3—C4—C5—Cl2 | −176.18 (13) |
O1—C1—C2—C3 | −174.38 (17) | C3—C4—C5—C6 | 6.5 (3) |
C6—C1—C2—Cl1 | −175.43 (13) | Cl2—C5—C6—O4 | −3.4 (3) |
C6—C1—C2—C3 | 6.9 (3) | Cl2—C5—C6—C1 | 175.92 (13) |
O1—C1—C6—O4 | 0.7 (2) | C4—C5—C6—O4 | 173.89 (17) |
O1—C1—C6—C5 | −178.69 (16) | C4—C5—C6—C1 | −6.8 (3) |
C2—C1—C6—O4 | 179.49 (16) | C11—N1—C7—C8 | 0.4 (3) |
C2—C1—C6—C5 | 0.1 (2) | C11—N1—C7—C12 | −179.28 (16) |
Cl1—C2—C3—O2 | −2.2 (3) | N1—C7—C8—C9 | 0.3 (3) |
Cl1—C2—C3—C4 | 174.88 (14) | C12—C7—C8—C9 | 179.94 (17) |
C1—C2—C3—O2 | 175.44 (16) | C7—C8—C9—C10 | −0.4 (3) |
C1—C2—C3—C4 | −7.5 (3) | C8—C9—C10—C11 | −0.2 (3) |
O2—C3—C4—O3 | −2.2 (2) | C7—N1—C11—C10 | −1.0 (3) |
O2—C3—C4—C5 | 178.25 (16) | C9—C10—C11—N1 | 0.9 (3) |
C2—C3—C4—O3 | −179.45 (17) | N1—C7—C12—O5 | −11.7 (2) |
C2—C3—C4—C5 | 1.0 (3) | C8—C7—C12—O5 | 168.63 (18) |
O3—C4—C5—Cl2 | 4.3 (3) | N1—C7—C12—N2 | 168.49 (16) |
O3—C4—C5—C6 | −173.02 (18) | C8—C7—C12—N2 | −11.2 (3) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.90 (3) | 2.32 (3) | 3.005 (2) | 133 (2) |
N1—H1···O4 | 0.90 (3) | 2.07 (3) | 2.713 (2) | 128 (3) |
N1—H1···O5 | 0.90 (3) | 2.32 (3) | 2.690 (2) | 105 (2) |
N2—H2A···O1i | 0.84 (2) | 2.20 (3) | 3.033 (2) | 168 (2) |
N2—H2B···O4ii | 0.85 (2) | 2.12 (2) | 2.919 (2) | 156 (3) |
O2—H2···O3 | 0.90 (3) | 2.00 (3) | 2.5942 (19) | 123 (3) |
O2—H2···O5iii | 0.90 (3) | 2.35 (3) | 3.098 (2) | 142 (3) |
C10—H10···O3iv | 0.95 | 2.38 | 3.026 (2) | 125 |
C10—H10···O5v | 0.95 | 2.48 | 3.310 (2) | 146 |
Symmetry codes: (i) −x+2, y+1/2, −z+1/2; (ii) −x+2, −y+1, −z+1; (iii) −x+1, −y+1, −z; (iv) −x+1, y−1/2, −z+1/2; (v) x, −y+1/2, z+1/2. |
(II) 3-carbamoylpyridinium 2,5-dichloro-4-hydroxy-3,6-dioxocyclohexa-1,4-dienolate
top
Crystal data top
C6H7N2O+·C6HCl2O4− | F(000) = 336.00 |
Mr = 331.11 | Dx = 1.702 Mg m−3 |
Monoclinic, Pc | Mo Kα radiation, λ = 0.71075 Å |
Hall symbol: P -2yc | Cell parameters from 5350 reflections |
a = 9.9861 (5) Å | θ = 3.3–29.9° |
b = 6.1438 (3) Å | µ = 0.53 mm−1 |
c = 11.6027 (5) Å | T = 100 K |
β = 114.8583 (16)° | Platelet, black |
V = 645.90 (5) Å3 | 0.38 × 0.27 × 0.08 mm |
Z = 2 | |
Data collection top
Rigaku R-AXIS RAPID II diffractometer | 2991 reflections with I > 2σ(I) |
Detector resolution: 10.00 pixels mm-1 | Rint = 0.019 |
ω scans | θmax = 29.9° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −14→13 |
Tmin = 0.753, Tmax = 0.959 | k = −8→8 |
5606 measured reflections | l = −16→16 |
3191 independent reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.033 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.149 | w = 1/[σ2(Fo2) + (0.1346P)2 + 0.041P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max < 0.001 |
3191 reflections | Δρmax = 0.45 e Å−3 |
206 parameters | Δρmin = −0.34 e Å−3 |
2 restraints | Absolute structure: Flack (1983), with 1354 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.09 (6) |
Crystal data top
C6H7N2O+·C6HCl2O4− | V = 645.90 (5) Å3 |
Mr = 331.11 | Z = 2 |
Monoclinic, Pc | Mo Kα radiation |
a = 9.9861 (5) Å | µ = 0.53 mm−1 |
b = 6.1438 (3) Å | T = 100 K |
c = 11.6027 (5) Å | 0.38 × 0.27 × 0.08 mm |
β = 114.8583 (16)° | |
Data collection top
Rigaku R-AXIS RAPID II diffractometer | 3191 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 2991 reflections with I > 2σ(I) |
Tmin = 0.753, Tmax = 0.959 | Rint = 0.019 |
5606 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.033 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.149 | Δρmax = 0.45 e Å−3 |
S = 1.01 | Δρmin = −0.34 e Å−3 |
3191 reflections | Absolute structure: Flack (1983), with 1354 Friedel pairs |
206 parameters | Absolute structure parameter: 0.09 (6) |
2 restraints | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | −0.22309 (7) | −0.16092 (10) | 0.27861 (6) | 0.02023 (18) | |
Cl2 | −0.21745 (6) | 0.66069 (10) | −0.05064 (5) | 0.02024 (18) | |
O1 | 0.0159 (3) | 0.1613 (3) | 0.3310 (2) | 0.0165 (4) | |
O2 | −0.4633 (2) | −0.0115 (4) | 0.0309 (2) | 0.0195 (4) | |
O3 | −0.4588 (3) | 0.3384 (3) | −0.0955 (2) | 0.0201 (5) | |
O4 | 0.0276 (2) | 0.5097 (3) | 0.1963 (2) | 0.0178 (4) | |
O5 | 0.2959 (3) | 0.9866 (3) | 0.7990 (2) | 0.0192 (4) | |
N1 | 0.2091 (3) | 0.5482 (4) | 0.4386 (2) | 0.0161 (4) | |
N2 | 0.1189 (3) | 1.0973 (4) | 0.6108 (2) | 0.0217 (5) | |
C1 | −0.0932 (3) | 0.1973 (5) | 0.2316 (2) | 0.0118 (5) | |
C2 | −0.2246 (3) | 0.0611 (4) | 0.1873 (3) | 0.0159 (5) | |
C3 | −0.3419 (3) | 0.1077 (5) | 0.0779 (3) | 0.0160 (5) | |
C4 | −0.3420 (3) | 0.3060 (4) | 0.0000 (3) | 0.0145 (5) | |
C5 | −0.2134 (3) | 0.4371 (4) | 0.0417 (3) | 0.0148 (5) | |
C6 | −0.0904 (3) | 0.3968 (4) | 0.1522 (3) | 0.0143 (5) | |
C7 | 0.1760 (3) | 0.7230 (4) | 0.4914 (3) | 0.0168 (5) | |
H7 | 0.0920 | 0.8089 | 0.4428 | 0.020* | |
C8 | 0.2640 (3) | 0.7784 (4) | 0.6164 (3) | 0.0143 (5) | |
C9 | 0.3863 (3) | 0.6481 (4) | 0.6843 (3) | 0.0163 (5) | |
H9 | 0.4473 | 0.6803 | 0.7707 | 0.020* | |
C10 | 0.4192 (3) | 0.4712 (5) | 0.6260 (3) | 0.0204 (5) | |
H10 | 0.5039 | 0.3845 | 0.6714 | 0.024* | |
C11 | 0.3276 (3) | 0.4232 (4) | 0.5019 (3) | 0.0194 (5) | |
H11 | 0.3482 | 0.3019 | 0.4612 | 0.023* | |
C12 | 0.2275 (3) | 0.9650 (4) | 0.6827 (2) | 0.0145 (5) | |
H1 | 0.147 (6) | 0.513 (7) | 0.366 (5) | 0.030 (11)* | |
H2 | −0.528 (6) | 0.043 (8) | −0.046 (6) | 0.038 (12)* | |
H2A | 0.068 (5) | 1.065 (6) | 0.530 (4) | 0.016 (8)* | |
H2B | 0.092 (8) | 1.220 (9) | 0.647 (7) | 0.055 (17)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0191 (3) | 0.0185 (3) | 0.0185 (3) | −0.0036 (2) | 0.0034 (3) | 0.0064 (2) |
Cl2 | 0.0216 (4) | 0.0187 (3) | 0.0161 (3) | −0.0033 (2) | 0.0037 (2) | 0.0062 (2) |
O1 | 0.0161 (10) | 0.0164 (10) | 0.0140 (9) | −0.0004 (7) | 0.0034 (8) | 0.0007 (7) |
O2 | 0.0146 (9) | 0.0210 (10) | 0.0184 (9) | −0.0045 (8) | 0.0024 (8) | 0.0034 (8) |
O3 | 0.0181 (11) | 0.0227 (11) | 0.0148 (9) | −0.0013 (8) | 0.0021 (8) | 0.0036 (7) |
O4 | 0.0154 (9) | 0.0178 (10) | 0.0160 (9) | −0.0061 (8) | 0.0026 (7) | 0.0008 (7) |
O5 | 0.0187 (9) | 0.0209 (9) | 0.0138 (9) | −0.0009 (8) | 0.0028 (7) | −0.0014 (7) |
N1 | 0.0162 (10) | 0.0165 (9) | 0.0132 (9) | −0.0002 (9) | 0.0038 (8) | −0.0015 (8) |
N2 | 0.0237 (12) | 0.0220 (12) | 0.0155 (11) | 0.0097 (10) | 0.0043 (10) | 0.0010 (10) |
C1 | 0.0101 (12) | 0.0137 (10) | 0.0110 (10) | 0.0009 (9) | 0.0037 (9) | −0.0003 (9) |
C2 | 0.0174 (12) | 0.0133 (10) | 0.0175 (11) | −0.0003 (10) | 0.0079 (10) | 0.0016 (10) |
C3 | 0.0170 (13) | 0.0172 (11) | 0.0135 (11) | −0.0023 (11) | 0.0061 (10) | −0.0025 (10) |
C4 | 0.0163 (14) | 0.0142 (10) | 0.0123 (11) | 0.0022 (10) | 0.0052 (10) | 0.0011 (10) |
C5 | 0.0151 (12) | 0.0157 (11) | 0.0119 (10) | −0.0005 (10) | 0.0040 (10) | 0.0021 (10) |
C6 | 0.0170 (12) | 0.0133 (10) | 0.0115 (10) | −0.0002 (10) | 0.0049 (9) | 0.0023 (10) |
C7 | 0.0175 (11) | 0.0144 (10) | 0.0158 (11) | −0.0001 (9) | 0.0043 (9) | −0.0019 (9) |
C8 | 0.0105 (12) | 0.0150 (10) | 0.0167 (10) | 0.0003 (10) | 0.0050 (9) | 0.0018 (10) |
C9 | 0.0098 (11) | 0.0217 (12) | 0.0132 (10) | 0.0043 (9) | 0.0006 (9) | 0.0019 (9) |
C10 | 0.0198 (13) | 0.0221 (12) | 0.0161 (12) | 0.0088 (11) | 0.0043 (10) | 0.0034 (10) |
C11 | 0.0222 (13) | 0.0182 (11) | 0.0174 (12) | 0.0010 (10) | 0.0080 (10) | −0.0011 (10) |
C12 | 0.0126 (11) | 0.0162 (11) | 0.0124 (10) | −0.0001 (9) | 0.0032 (9) | 0.0001 (8) |
Geometric parameters (Å, º) top
Cl1—C2 | 1.723 (3) | C1—C6 | 1.541 (4) |
Cl2—C5 | 1.732 (3) | C2—C3 | 1.347 (5) |
O1—C1 | 1.229 (3) | C3—C4 | 1.517 (4) |
O2—C3 | 1.322 (4) | C4—C5 | 1.418 (4) |
O2—H2 | 0.92 (6) | C5—C6 | 1.375 (5) |
O3—C4 | 1.242 (4) | C7—C8 | 1.386 (4) |
O4—C6 | 1.275 (4) | C7—H7 | 0.9500 |
O5—C12 | 1.237 (3) | C8—C9 | 1.394 (3) |
N1—C11 | 1.341 (4) | C8—C12 | 1.508 (3) |
N1—C7 | 1.345 (3) | C9—C10 | 1.391 (4) |
N1—H1 | 0.84 (6) | C9—H9 | 0.9500 |
N2—C12 | 1.331 (4) | C10—C11 | 1.374 (4) |
N2—H2A | 0.88 (4) | C10—H10 | 0.9500 |
N2—H2B | 0.96 (7) | C11—H11 | 0.9500 |
C1—C2 | 1.456 (4) | | |
| | | |
C3—O2—H2 | 110 (4) | O4—C6—C5 | 126.1 (3) |
C11—N1—C7 | 122.5 (2) | C1—C6—C5 | 117.9 (3) |
C11—N1—H1 | 121 (3) | O4—C6—C1 | 116.0 (3) |
C7—N1—H1 | 116 (3) | N1—C7—C8 | 120.3 (2) |
C12—N2—H2A | 119 (3) | N1—C7—H7 | 119.9 |
C12—N2—H2B | 121 (4) | C8—C7—H7 | 119.9 |
H2A—N2—H2B | 120 (5) | C7—C8—C9 | 118.0 (2) |
O1—C1—C2 | 122.7 (3) | C7—C8—C12 | 122.6 (2) |
O1—C1—C6 | 118.2 (3) | C9—C8—C12 | 119.4 (2) |
C2—C1—C6 | 119.1 (2) | C10—C9—C8 | 120.2 (3) |
Cl1—C2—C3 | 121.8 (2) | C10—C9—H9 | 119.9 |
C1—C2—C3 | 120.5 (3) | C8—C9—H9 | 119.9 |
Cl1—C2—C1 | 117.7 (2) | C11—C10—C9 | 119.2 (3) |
O2—C3—C2 | 123.7 (3) | C11—C10—H10 | 120.4 |
O2—C3—C4 | 115.4 (3) | C9—C10—H10 | 120.4 |
C2—C3—C4 | 121.0 (3) | N1—C11—C10 | 119.8 (3) |
O3—C4—C3 | 115.2 (3) | N1—C11—H11 | 120.1 |
O3—C4—C5 | 126.2 (3) | C10—C11—H11 | 120.1 |
C3—C4—C5 | 118.7 (3) | O5—C12—N2 | 123.3 (3) |
Cl2—C5—C6 | 119.9 (2) | O5—C12—C8 | 119.8 (2) |
C4—C5—C6 | 122.8 (3) | N2—C12—C8 | 116.9 (2) |
Cl2—C5—C4 | 117.2 (2) | | |
| | | |
O1—C1—C2—Cl1 | −1.0 (4) | C3—C4—C5—Cl2 | 179.5 (2) |
O1—C1—C2—C3 | 179.7 (3) | C3—C4—C5—C6 | −2.4 (5) |
C6—C1—C2—Cl1 | 179.8 (2) | Cl2—C5—C6—O4 | −0.7 (5) |
C6—C1—C2—C3 | 0.5 (4) | Cl2—C5—C6—C1 | 179.3 (2) |
O1—C1—C6—O4 | 0.6 (4) | C4—C5—C6—O4 | −178.7 (3) |
O1—C1—C6—C5 | −179.4 (3) | C4—C5—C6—C1 | 1.2 (4) |
C2—C1—C6—O4 | 179.8 (3) | C11—N1—C7—C8 | −1.1 (4) |
C2—C1—C6—C5 | −0.2 (4) | N1—C7—C8—C9 | 0.1 (4) |
Cl1—C2—C3—O2 | −0.8 (5) | N1—C7—C8—C12 | −176.5 (2) |
Cl1—C2—C3—C4 | 179.0 (2) | C7—C8—C9—C10 | 1.3 (4) |
C1—C2—C3—O2 | 178.5 (3) | C12—C8—C9—C10 | 178.0 (3) |
C1—C2—C3—C4 | −1.7 (5) | C8—C9—C10—C11 | −1.7 (4) |
O2—C3—C4—O3 | 3.3 (4) | C7—N1—C11—C10 | 0.8 (4) |
O2—C3—C4—C5 | −177.6 (3) | C9—C10—C11—N1 | 0.7 (4) |
C2—C3—C4—O3 | −176.5 (3) | C7—C8—C12—O5 | 168.7 (3) |
C2—C3—C4—C5 | 2.7 (5) | C9—C8—C12—O5 | −7.9 (4) |
O3—C4—C5—Cl2 | −1.5 (4) | C7—C8—C12—N2 | −10.0 (4) |
O3—C4—C5—C6 | 176.7 (3) | C9—C8—C12—N2 | 173.4 (3) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.84 (5) | 2.47 (5) | 2.984 (3) | 121 (4) |
N1—H1···O4 | 0.84 (5) | 1.82 (5) | 2.638 (3) | 164 (4) |
N2—H2A···O1i | 0.88 (4) | 2.22 (4) | 2.991 (3) | 146 (4) |
N2—H2B···O4ii | 0.96 (7) | 1.95 (6) | 2.899 (3) | 172 (6) |
O2—H2···O3 | 0.92 (6) | 2.11 (5) | 2.613 (3) | 114 (5) |
O2—H2···O5iii | 0.92 (6) | 1.95 (6) | 2.754 (3) | 146 (5) |
C7—H7···O1i | 0.95 | 2.47 | 3.282 (3) | 143 |
C11—H11···O2iv | 0.95 | 2.47 | 3.206 (4) | 134 |
C11—H11···O5v | 0.95 | 2.48 | 3.370 (3) | 157 |
Symmetry codes: (i) x, y+1, z; (ii) x, −y+2, z+1/2; (iii) x−1, y−1, z−1; (iv) x+1, −y, z+1/2; (v) x, −y+1, z−1/2. |
(III) 4-carbamoylpyridinium 2,5-dichloro-4-hydroxy-3,6-dioxocyclohexa-1,4-dienolate
top
Crystal data top
C6H7N2O+·C6HCl2O4− | F(000) = 672.00 |
Mr = 331.11 | Dx = 1.780 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71075 Å |
Hall symbol: C -2yc | Cell parameters from 5726 reflections |
a = 12.9482 (4) Å | θ = 3.0–30.0° |
b = 13.4993 (5) Å | µ = 0.55 mm−1 |
c = 7.0726 (3) Å | T = 100 K |
β = 92.0130 (11)° | Platelet, brown |
V = 1235.47 (8) Å3 | 0.30 × 0.15 × 0.12 mm |
Z = 4 | |
Data collection top
Rigaku R-AXIS RAPID II diffractometer | 3029 reflections with I > 2σ(I) |
Detector resolution: 10.00 pixels mm-1 | Rint = 0.016 |
ω scans | θmax = 30.0°, θmin = 3.0° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −18→17 |
Tmin = 0.767, Tmax = 0.936 | k = −18→18 |
5840 measured reflections | l = −9→9 |
3185 independent reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.022 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.061 | w = 1/[σ2(Fo2) + (0.0391P)2 + 0.1632P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max = 0.001 |
3185 reflections | Δρmax = 0.32 e Å−3 |
206 parameters | Δρmin = −0.23 e Å−3 |
2 restraints | Absolute structure: Flack (1983), with 1411 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.00 (3) |
Crystal data top
C6H7N2O+·C6HCl2O4− | V = 1235.47 (8) Å3 |
Mr = 331.11 | Z = 4 |
Monoclinic, Cc | Mo Kα radiation |
a = 12.9482 (4) Å | µ = 0.55 mm−1 |
b = 13.4993 (5) Å | T = 100 K |
c = 7.0726 (3) Å | 0.30 × 0.15 × 0.12 mm |
β = 92.0130 (11)° | |
Data collection top
Rigaku R-AXIS RAPID II diffractometer | 3185 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 3029 reflections with I > 2σ(I) |
Tmin = 0.767, Tmax = 0.936 | Rint = 0.016 |
5840 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.022 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.061 | Δρmax = 0.32 e Å−3 |
S = 1.08 | Δρmin = −0.23 e Å−3 |
3185 reflections | Absolute structure: Flack (1983), with 1411 Friedel pairs |
206 parameters | Absolute structure parameter: 0.00 (3) |
2 restraints | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | 0.82353 (3) | 0.49898 (2) | 0.62098 (4) | 0.01496 (8) | |
Cl2 | 0.52574 (3) | 0.12870 (2) | 0.67726 (4) | 0.01469 (8) | |
O1 | 0.60208 (10) | 0.48768 (9) | 0.50689 (19) | 0.0168 (2) | |
O2 | 0.87005 (8) | 0.30674 (8) | 0.80235 (16) | 0.0135 (2) | |
O3 | 0.74709 (8) | 0.14775 (9) | 0.80503 (15) | 0.0135 (2) | |
O4 | 0.47454 (9) | 0.33097 (8) | 0.50806 (15) | 0.0144 (2) | |
O5 | 0.42357 (9) | 0.68220 (9) | 0.45444 (16) | 0.0169 (2) | |
N1 | 0.08597 (10) | 0.72797 (10) | 0.13127 (18) | 0.0137 (2) | |
N2 | 0.38330 (11) | 0.52215 (10) | 0.3900 (2) | 0.0156 (2) | |
C1 | 0.63604 (11) | 0.40974 (11) | 0.5729 (2) | 0.0109 (3) | |
C2 | 0.74192 (11) | 0.39932 (11) | 0.6435 (2) | 0.0111 (3) | |
C3 | 0.77542 (11) | 0.31451 (11) | 0.72668 (19) | 0.0103 (3) | |
C4 | 0.70662 (11) | 0.22381 (11) | 0.73503 (19) | 0.0109 (3) | |
C5 | 0.60406 (11) | 0.23260 (11) | 0.6640 (2) | 0.0114 (3) | |
C6 | 0.56272 (11) | 0.31904 (11) | 0.5798 (2) | 0.0110 (3) | |
C7 | 0.16801 (12) | 0.78916 (11) | 0.1567 (2) | 0.0137 (3) | |
H7 | 0.1630 | 0.8568 | 0.1202 | 0.016* | |
C8 | 0.25895 (12) | 0.75244 (11) | 0.2362 (2) | 0.0127 (3) | |
H8 | 0.3172 | 0.7946 | 0.2552 | 0.015* | |
C9 | 0.26472 (11) | 0.65279 (11) | 0.28849 (19) | 0.0103 (3) | |
C10 | 0.17939 (12) | 0.59147 (11) | 0.2575 (2) | 0.0132 (3) | |
H10 | 0.1827 | 0.5232 | 0.2902 | 0.016* | |
C11 | 0.08945 (13) | 0.63181 (11) | 0.1781 (2) | 0.0156 (3) | |
H11 | 0.0302 | 0.5912 | 0.1569 | 0.019* | |
C12 | 0.36499 (11) | 0.61842 (11) | 0.3846 (2) | 0.0114 (3) | |
H1 | 0.030 (2) | 0.7538 (18) | 0.066 (3) | 0.026 (6)* | |
H2 | 0.881 (2) | 0.247 (2) | 0.851 (4) | 0.036 (7)* | |
H2A | 0.445 (2) | 0.497 (2) | 0.444 (4) | 0.031 (7)* | |
H2B | 0.343 (2) | 0.482 (2) | 0.343 (4) | 0.037 (7)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.01137 (15) | 0.01028 (15) | 0.02300 (17) | −0.00293 (11) | −0.00284 (12) | 0.00281 (12) |
Cl2 | 0.01059 (15) | 0.00918 (14) | 0.02406 (17) | −0.00280 (12) | −0.00274 (12) | 0.00177 (13) |
O1 | 0.0139 (5) | 0.0105 (5) | 0.0255 (6) | −0.0001 (4) | −0.0053 (4) | 0.0036 (4) |
O2 | 0.0087 (5) | 0.0119 (5) | 0.0197 (5) | 0.0006 (4) | −0.0038 (4) | 0.0027 (4) |
O3 | 0.0123 (5) | 0.0088 (5) | 0.0194 (5) | 0.0002 (4) | −0.0014 (4) | 0.0018 (4) |
O4 | 0.0101 (5) | 0.0123 (5) | 0.0204 (5) | 0.0001 (4) | −0.0060 (4) | −0.0001 (4) |
O5 | 0.0145 (5) | 0.0135 (5) | 0.0223 (5) | −0.0028 (4) | −0.0058 (4) | −0.0014 (4) |
N1 | 0.0102 (6) | 0.0150 (6) | 0.0158 (5) | 0.0036 (4) | −0.0022 (5) | 0.0008 (5) |
N2 | 0.0112 (6) | 0.0112 (6) | 0.0238 (6) | 0.0014 (5) | −0.0064 (5) | −0.0006 (5) |
C1 | 0.0101 (6) | 0.0104 (6) | 0.0121 (6) | 0.0006 (5) | −0.0010 (5) | −0.0002 (5) |
C2 | 0.0096 (6) | 0.0088 (6) | 0.0148 (6) | −0.0027 (5) | −0.0021 (5) | 0.0004 (5) |
C3 | 0.0083 (6) | 0.0110 (6) | 0.0114 (6) | −0.0001 (5) | −0.0009 (5) | −0.0016 (5) |
C4 | 0.0112 (6) | 0.0095 (6) | 0.0120 (6) | 0.0011 (5) | −0.0008 (5) | −0.0011 (5) |
C5 | 0.0093 (6) | 0.0084 (6) | 0.0164 (6) | −0.0027 (5) | −0.0005 (5) | −0.0001 (5) |
C6 | 0.0095 (6) | 0.0103 (7) | 0.0131 (6) | −0.0001 (5) | 0.0007 (5) | −0.0011 (5) |
C7 | 0.0161 (7) | 0.0101 (6) | 0.0149 (6) | 0.0024 (5) | 0.0002 (5) | 0.0013 (5) |
C8 | 0.0133 (6) | 0.0105 (6) | 0.0144 (6) | −0.0004 (5) | −0.0005 (5) | 0.0000 (5) |
C9 | 0.0097 (6) | 0.0103 (6) | 0.0106 (6) | 0.0013 (5) | −0.0016 (5) | −0.0005 (5) |
C10 | 0.0110 (6) | 0.0116 (7) | 0.0168 (6) | −0.0002 (5) | −0.0020 (5) | 0.0013 (5) |
C11 | 0.0124 (7) | 0.0139 (7) | 0.0204 (7) | −0.0015 (5) | −0.0026 (6) | −0.0017 (5) |
C12 | 0.0085 (6) | 0.0135 (7) | 0.0120 (6) | −0.0007 (5) | −0.0011 (5) | 0.0008 (5) |
Geometric parameters (Å, º) top
Cl1—C2 | 1.7216 (15) | C1—C2 | 1.449 (2) |
Cl2—C5 | 1.7353 (15) | C2—C3 | 1.352 (2) |
O1—C1 | 1.2263 (19) | C3—C4 | 1.517 (2) |
O2—C3 | 1.3239 (18) | C4—C5 | 1.408 (2) |
O2—H2 | 0.89 (3) | C5—C6 | 1.407 (2) |
O3—C4 | 1.2473 (19) | C7—C8 | 1.379 (2) |
O4—C6 | 1.2435 (18) | C7—H7 | 0.9500 |
O5—C12 | 1.2388 (18) | C8—C9 | 1.396 (2) |
N1—C11 | 1.340 (2) | C8—H8 | 0.9500 |
N1—C7 | 1.353 (2) | C9—C10 | 1.392 (2) |
N1—H1 | 0.92 (2) | C9—C12 | 1.5168 (19) |
N2—C12 | 1.321 (2) | C10—C11 | 1.386 (2) |
N2—H2A | 0.94 (3) | C10—H10 | 0.9500 |
N2—H2B | 0.82 (3) | C11—H11 | 0.9500 |
C1—C6 | 1.551 (2) | | |
| | | |
C3—O2—H2 | 111.2 (17) | O4—C6—C5 | 127.60 (14) |
C11—N1—C7 | 122.63 (13) | C1—C6—C5 | 116.34 (12) |
C11—N1—H1 | 120.8 (15) | O4—C6—C1 | 116.05 (13) |
C7—N1—H1 | 116.1 (15) | N1—C7—C8 | 119.34 (13) |
C12—N2—H2A | 120.9 (16) | N1—C7—H7 | 120.3 |
C12—N2—H2B | 122 (2) | C8—C7—H7 | 120.3 |
H2A—N2—H2B | 117 (3) | C7—C8—C9 | 119.43 (14) |
O1—C1—C6 | 118.52 (13) | C7—C8—H8 | 120.3 |
C2—C1—C6 | 119.02 (13) | C9—C8—H8 | 120.3 |
O1—C1—C2 | 122.45 (14) | C10—C9—C8 | 119.76 (13) |
Cl1—C2—C3 | 120.90 (11) | C10—C9—C12 | 123.42 (13) |
C1—C2—C3 | 121.16 (13) | C8—C9—C12 | 116.77 (13) |
Cl1—C2—C1 | 117.94 (11) | C11—C10—C9 | 118.75 (14) |
O2—C3—C2 | 121.42 (13) | C11—C10—H10 | 120.6 |
O2—C3—C4 | 117.19 (12) | C9—C10—H10 | 120.6 |
C2—C3—C4 | 121.39 (13) | N1—C11—C10 | 120.07 (14) |
O3—C4—C3 | 116.16 (12) | N1—C11—H11 | 120.0 |
O3—C4—C5 | 126.07 (14) | C10—C11—H11 | 120.0 |
C3—C4—C5 | 117.77 (13) | O5—C12—N2 | 124.42 (14) |
Cl2—C5—C6 | 118.61 (11) | O5—C12—C9 | 117.94 (13) |
C4—C5—C6 | 124.11 (13) | N2—C12—C9 | 117.63 (13) |
Cl2—C5—C4 | 117.27 (11) | | |
| | | |
O1—C1—C2—Cl1 | −3.5 (2) | C3—C4—C5—Cl2 | −179.19 (10) |
O1—C1—C2—C3 | 175.66 (15) | C3—C4—C5—C6 | 2.4 (2) |
C6—C1—C2—Cl1 | 176.17 (10) | Cl2—C5—C6—O4 | −1.3 (2) |
C6—C1—C2—C3 | −4.7 (2) | Cl2—C5—C6—C1 | 179.67 (10) |
O1—C1—C6—O4 | 3.4 (2) | C4—C5—C6—O4 | 177.12 (14) |
O1—C1—C6—C5 | −177.43 (14) | C4—C5—C6—C1 | −1.9 (2) |
C2—C1—C6—O4 | −176.29 (13) | C11—N1—C7—C8 | −0.9 (2) |
C2—C1—C6—C5 | 2.87 (19) | N1—C7—C8—C9 | 0.1 (2) |
Cl1—C2—C3—O2 | 3.6 (2) | C7—C8—C9—C10 | 0.9 (2) |
Cl1—C2—C3—C4 | −175.63 (10) | C7—C8—C9—C12 | −176.85 (13) |
C1—C2—C3—O2 | −175.57 (13) | C8—C9—C10—C11 | −1.2 (2) |
C1—C2—C3—C4 | 5.2 (2) | C12—C9—C10—C11 | 176.37 (14) |
O2—C3—C4—O3 | −3.29 (19) | C7—N1—C11—C10 | 0.5 (2) |
O2—C3—C4—C5 | 176.74 (12) | C9—C10—C11—N1 | 0.5 (2) |
C2—C3—C4—O3 | 175.95 (13) | C10—C9—C12—O5 | −159.29 (15) |
C2—C3—C4—C5 | −4.0 (2) | C8—C9—C12—O5 | 18.4 (2) |
O3—C4—C5—Cl2 | 0.9 (2) | C10—C9—C12—N2 | 19.9 (2) |
O3—C4—C5—C6 | −177.57 (14) | C8—C9—C12—N2 | −162.45 (14) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O5i | 0.92 (2) | 1.79 (2) | 2.6966 (18) | 173 (2) |
N2—H2A···O1 | 0.94 (3) | 2.07 (3) | 2.9598 (19) | 158 (2) |
N2—H2A···O4 | 0.94 (3) | 2.32 (3) | 2.9469 (18) | 124 (2) |
N2—H2B···O3ii | 0.82 (3) | 2.16 (3) | 2.9424 (18) | 161 (3) |
O2—H2···O3 | 0.89 (3) | 2.21 (3) | 2.6728 (16) | 112 (2) |
O2—H2···O4iii | 0.89 (3) | 1.93 (3) | 2.6953 (15) | 144 (2) |
C7—H7···O1i | 0.95 | 2.37 | 3.2959 (19) | 164 |
C10—H10···O3ii | 0.95 | 2.45 | 3.3599 (19) | 159 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x−1/2, −y+1/2, z−1/2; (iii) x+1/2, −y+1/2, z+1/2. |
Experimental details
| (I) | (II) | (III) |
Crystal data |
Chemical formula | C6H7N2O+·C6HCl2O4− | C6H7N2O+·C6HCl2O4− | C6H7N2O+·C6HCl2O4− |
Mr | 331.11 | 331.11 | 331.11 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, Pc | Monoclinic, Cc |
Temperature (K) | 100 | 100 | 100 |
a, b, c (Å) | 9.3420 (5), 12.4483 (8), 11.4167 (7) | 9.9861 (5), 6.1438 (3), 11.6027 (5) | 12.9482 (4), 13.4993 (5), 7.0726 (3) |
β (°) | 108.8014 (17) | 114.8583 (16) | 92.0130 (11) |
V (Å3) | 1256.83 (13) | 645.90 (5) | 1235.47 (8) |
Z | 4 | 2 | 4 |
Radiation type | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 0.54 | 0.53 | 0.55 |
Crystal size (mm) | 0.27 × 0.25 × 0.19 | 0.38 × 0.27 × 0.08 | 0.30 × 0.15 × 0.12 |
|
Data collection |
Diffractometer | Rigaku R-AXIS RAPID II diffractometer | Rigaku R-AXIS RAPID II diffractometer | Rigaku R-AXIS RAPID II diffractometer |
Absorption correction | Numerical (ABSCOR; Higashi, 1995) | Multi-scan (ABSCOR; Higashi, 1995) | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.875, 0.902 | 0.753, 0.959 | 0.767, 0.936 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11008, 3596, 2830 | 5606, 3191, 2991 | 5840, 3185, 3029 |
Rint | 0.046 | 0.019 | 0.016 |
(sin θ/λ)max (Å−1) | 0.703 | 0.702 | 0.703 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.111, 1.11 | 0.033, 0.149, 1.01 | 0.022, 0.061, 1.08 |
No. of reflections | 3596 | 3191 | 3185 |
No. of parameters | 206 | 206 | 206 |
No. of restraints | 0 | 2 | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.48, −0.54 | 0.45, −0.34 | 0.32, −0.23 |
Absolute structure | ? | Flack (1983), with 1354 Friedel pairs | Flack (1983), with 1411 Friedel pairs |
Absolute structure parameter | ? | 0.09 (6) | 0.00 (3) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.90 (3) | 2.32 (3) | 3.005 (2) | 133 (2) |
N1—H1···O4 | 0.90 (3) | 2.07 (3) | 2.713 (2) | 128 (3) |
N1—H1···O5 | 0.90 (3) | 2.32 (3) | 2.690 (2) | 105 (2) |
N2—H2A···O1i | 0.84 (2) | 2.20 (3) | 3.033 (2) | 168 (2) |
N2—H2B···O4ii | 0.85 (2) | 2.12 (2) | 2.919 (2) | 156 (3) |
O2—H2···O3 | 0.90 (3) | 2.00 (3) | 2.5942 (19) | 123 (3) |
O2—H2···O5iii | 0.90 (3) | 2.35 (3) | 3.098 (2) | 142 (3) |
C10—H10···O3iv | 0.95 | 2.38 | 3.026 (2) | 125 |
C10—H10···O5v | 0.95 | 2.48 | 3.310 (2) | 146 |
Symmetry codes: (i) −x+2, y+1/2, −z+1/2; (ii) −x+2, −y+1, −z+1; (iii) −x+1, −y+1, −z; (iv) −x+1, y−1/2, −z+1/2; (v) x, −y+1/2, z+1/2. |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.84 (5) | 2.47 (5) | 2.984 (3) | 121 (4) |
N1—H1···O4 | 0.84 (5) | 1.82 (5) | 2.638 (3) | 164 (4) |
N2—H2A···O1i | 0.88 (4) | 2.22 (4) | 2.991 (3) | 146 (4) |
N2—H2B···O4ii | 0.96 (7) | 1.95 (6) | 2.899 (3) | 172 (6) |
O2—H2···O3 | 0.92 (6) | 2.11 (5) | 2.613 (3) | 114 (5) |
O2—H2···O5iii | 0.92 (6) | 1.95 (6) | 2.754 (3) | 146 (5) |
C7—H7···O1i | 0.95 | 2.47 | 3.282 (3) | 143 |
C11—H11···O2iv | 0.95 | 2.47 | 3.206 (4) | 134 |
C11—H11···O5v | 0.95 | 2.48 | 3.370 (3) | 157 |
Symmetry codes: (i) x, y+1, z; (ii) x, −y+2, z+1/2; (iii) x−1, y−1, z−1; (iv) x+1, −y, z+1/2; (v) x, −y+1, z−1/2. |
Hydrogen-bond geometry (Å, º) for (III) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O5i | 0.92 (2) | 1.79 (2) | 2.6966 (18) | 173 (2) |
N2—H2A···O1 | 0.94 (3) | 2.07 (3) | 2.9598 (19) | 158 (2) |
N2—H2A···O4 | 0.94 (3) | 2.32 (3) | 2.9469 (18) | 124 (2) |
N2—H2B···O3ii | 0.82 (3) | 2.16 (3) | 2.9424 (18) | 161 (3) |
O2—H2···O3 | 0.89 (3) | 2.21 (3) | 2.6728 (16) | 112 (2) |
O2—H2···O4iii | 0.89 (3) | 1.93 (3) | 2.6953 (15) | 144 (2) |
C7—H7···O1i | 0.95 | 2.37 | 3.2959 (19) | 164 |
C10—H10···O3ii | 0.95 | 2.45 | 3.3599 (19) | 159 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x−1/2, −y+1/2, z−1/2; (iii) x+1/2, −y+1/2, z+1/2. |
Chloranilic acid (2,5-dichloro-3,6-dihydroxy-1,4-benzoquinone), a strong dibasic acid with hydrogen-bond donor and acceptor groups, appears particularly attractive as a template for generating tightly bound self-assemblies with various pyridine derivatives (Ishida & Kashino, 1999a,b,c, 2002; Zaman et al., 1999, 2000, 2001, 2004), and as a model compound for investigating H-atom transfer in O—H···N and N—H···O hydrogen-bond systems (Nihei et al., 2000a,b; Ikeda et al., 2005; Suzuki et al., 2007; Gotoh et al., 2008; Seliger et al., 2009). Furthermore, salts and co-crystals of chloranilic acid with pyridine derivatives have recently attracted much interest with respect to organic ferroelectrics (Horiuchi, Ishii et al., 2005; Horiuchi, Kumai & Tokura, 2005; Asaji et al., 2007; Gotoh et al., 2007; Horiuchi & Tokura, 2008). In the present study, we have prepared three isomeric salts, C6H7N2O+.C6HCl2O4-, of chloranilic acid with picolinamide, nicotinamide and isonicotinamide, namely, 2-carbamoylpyridinium hydrogen chloranilate, (I), 3-carbamoylpyridinium hydrogen chloranilate, (II), and 4-carbamoylpyridinium hydrogen chloranilate, (III), in order to extend our studies of D—H···A hydrogen bonding (D = N, O, or C; A = N, O or Cl) in chloranilic acid–substituted-pyridine systems (Tabuchi et al., 2005; Gotoh et al., 2006, 2009).
Compound (I) contains one protonated picolinamide cation and one hydrogen chloranilate monoanion, which are linked by a bifurcated pyridinium N1—H1···(O1,O4) hydrogen bond (Table 1). There is a dihedral angle of 64.42 (6)° between the pyridine N1/C7—C11 ring and the anion C1–C6 ring (Fig. 1). In the cation, the acetamide C12/O5/N2 plane makes a dihedral angle of 11.62 (4)° with the pyridine ring, which is comparable with the equivalent angles of 9.84 (8) and 19.35 (4)° in compounds (II) and (III), respectively. This suggests that the contribution of the intramolecular N—H···O hydrogen bond (N1—H1···O5) to the molecular conformation of (I) is small. Similar angles of 11.44 (6), 2.74 (6) and 10.61 (3)° between the carboxy plane and the pyridine ring are observed in, respectively, 2-carboxypyridinium hydrogen chloranilate (Gotoh et al., 2009), 3-carboxypyridinium hydrogen chloranilate (Ishida, 2009a) and 4-carboxypyridinium hydrogen chloranilate monohydrate (Ishida, 2009b), which also suggests a weak intramolecular N—H···O hydrogen bond between the pyridininum N—H and the carboxy O atom in 2-carboxypyridinium hydrogen chloranilate. The two components in (I) are further connected through a pair of O2—H2···(O3,O5iii) bifurcated hydrogen bonds (symmetry code as in Table 1), to form a centrosymmetric 2+2 aggregate (Fig. 2). One of the amide N—H···O hydrogen bonds (N2—H2B···O4ii; Table 1) connects the aggregates into a chain along the [101] direction (Fig. 3). The second amide N—H···O hydrogen bond (N2—H2A···O1i; Table 1) further connects the chains, forming a three-dimensional network. A weak C—H···(O,O) bifurcated interaction is also present (Table 1).
Although all intermolecular N—H···O and O—H···O hydrogen bonds corresponding to those in (I) are observed in (II) (Table 2), all the D···A distances of the hydrogen bonds in (II) are shorter than those in (I), so that the molecular packing motifs are quite different from each other (Figs. 4–6). In (II), the cations and the anions are separately stacked in columns along the b axis. Between the two components a bifurcated pyridinium N1—H1···(O1,O4) hydrogen bond and an O2—H2···(O3,O5iii) hydrogen bond (symmetry code as in Table 2) are present as the primary interactions, forming a zigzag supramolecular chain along the [111] direction (Fig. 5). The dihedral angle between the pyridine N1/C7—C11 ring and the anion C1–C6 ring is 71.59 (10)°. This packing motif is similar to that of 3-carboxypyridinium hydrogen chloranilate, which crystallizes in the same space group, Pc, and is effectively isostuctural (Tabuchi et al., 2005). The cations and anions are linked by the equivalent hydrogen bonds to form a chain. In 3-carboxypyridinium hydrogen chloranilate, the carboxy group of the cation and the carbonyl O of the anion form an additional strong O—H···O hydrogen bond, which further connects the supramolecular chains related to each other by a c-glide plane to form a three-dimensional hydrogen-bond network. On the other hand, in (II) the amide group of the cation forms two weak N—H···O hydrogen bonds as the secondary interaction. One amide N—H···O hydrogen bond (N2—H2A···O1i; Table 2) connects the neighbouring chains related by a b translation, giving a wavy layer expanding parallel to the (101) plane (Fig. 6). The neighbouring layers related to each other by a c-glide plane are further linked by the second amide N—H···O hydrogen bond (N2—H2B···O4ii; Table 2) to form a three-dimensional hydrogen-bond network.
Compound (III) also crystallizes in a non-centrosymmetric space group, Cc, where the basic hydrogen-bonded structure is quite different from those of (I) and (II). In (III), primary hydrogen bonds are formed between the cations (N1—H1···O5i; symmetry code as in Table 3) and between the anions [O2—H2···(O3,O4iii); Table 3], and each component affords a supramolecular zigzag chain along the [101] direction (Figs. 7 and 8). The cation and anion chains are alternately arranged and linked together through amide N—H···O hydrogen bonds [N2—H2A···(O1,O4) and N2—H2B···O3ii] and C—H···O hydrogen bonds (Table 3), forming a layer parallel to the (101) plane. In the layer, the cation and anion molecules are approximately coplanar, with a dihedral angle of 4.61 (5)° between the N1/C7–C11 and C1–C6 rings. A short Cl···Cl contact [Cl1···Cl2v = 3.1634 (5) Å; symmetry code: (v) x + 1/2, y + 1/2, z] is also observed in the layer. Between the layers, no significant interaction is observed; the shortest contact is C4···C7vi = 3.167 (2) Å [symmetry code: (vi) x + 1/2, y - 1/2, z + 1].