Ezetimibe {systematic name: (3R,4S)-1-(4-fluorophenyl)-3-[(3S)-3-(4-fluorophenyl)-3-hydroxypropyl]-4-(4-hydroxyphenyl)azetidin-2-one}, C24H21F2NO3, is used to lower cholesterol levels by inhibiting cholesterol resorption in the human intestine. The crystal structure of ezetimibe anhydrate was solved from laboratory powder diffraction data by means of real-space methods using the program DASH [David et al. (2006). J. Appl. Cryst. 39, 910-915]. Subsequent Rietveld refinement with TOPAS Academic [Coelho (2007). TOPAS Academic User Manual. Version 4.1. Coelho Software, Brisbane, Australia] led to a final Rwp value of 8.19% at 1.75 Å resolution. The compound crystallizes in the space group P212121 with one molecule in the asymmetric unit. The molecules are closely packed and two intermolecular hydrogen bonds form an extended hydrogen-bond architecture.
Supporting information
CCDC reference: 786811
Data collection: Stoe WINXPOW (Stoe & Cie, 1988); cell refinement: TOPAS Academic (Coelho, 2007); data reduction: DASH (David et al., 2006); program(s) used to solve structure: DASH (David et al., 2006); program(s) used to refine structure: TOPAS Academic (Coelho, 2007); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: publCIF (Westrip, 2010).
(3
R,4
S)-1-(4-fluorophenyl)-3-[(3
S)-3-(4-fluorophenyl)-
3-hydroxypropyl]-4-(4-hydroxyphenyl)azetidin-2-one
top
Crystal data top
C24H21F2NO3 | F(000) = 856 |
Mr = 409.42 | Dx = 1.347 Mg m−3 |
Orthorhombic, P212121 | Cu Kα1 radiation, λ = 1.5406 Å |
Hall symbol: P 2ac 2ab | µ = 0.84 mm−1 |
a = 5.94606 (19) Å | T = 293 K |
b = 15.8898 (5) Å | Particle morphology: no specific habit |
c = 21.3765 (6) Å | white |
V = 2019.69 (11) Å3 | cylinder, 10 × 0.7 mm |
Z = 4 | Specimen preparation: Prepared at 293 K |
Data collection top
Stoe Stadi-P diffractometer with linear position-sensitive detector | Data collection mode: transmission |
Radiation source: sealed X-ray tube | Scan method: step |
Primary focussing, Ge 111 monochromator | 2θmin = 3°, 2θmax = 69.99°, 2θstep = 0.01° |
Specimen mounting: glass capillary | |
Refinement top
Refinement on Inet | 196 parameters |
Least-squares matrix: full with fixed elements per cycle | 208 restraints |
Rp = 0.079 | 0 constraints |
Rwp = 0.082 | All H-atom parameters refined |
Rexp = 0.071 | Weighting scheme based on measured s.u.'s w = 1/σ[Yobs)2 |
RBragg = 1.094 | (Δ/σ)max = 0.001 |
6700 data points | Background function: Bayesian high-pass filter with 20 terms |
Excluded region(s): none | Preferred orientation correction: none |
Profile function: modified Thompson-Cox-Hastings pseudo-Voigt (Young, 1993) | |
Special details top
Experimental. specimen was rotated |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.8376 (7) | 0.7622 (3) | 0.78693 (17) | 0.056 (1) | |
C11 | 0.8616 (6) | 0.7090 (2) | 0.73652 (14) | 0.056 (1) | |
C12 | 0.6960 (6) | 0.7035 (2) | 0.69024 (16) | 0.056 (1) | |
H12 | 0.565 (2) | 0.7401 (10) | 0.6945 (6) | 0.067 (2) | |
C13 | 0.7249 (6) | 0.6467 (2) | 0.63929 (14) | 0.056 (1) | |
H13 | 0.626 (2) | 0.6396 (8) | 0.6071 (5) | 0.067 (2) | |
C14 | 0.9080 (6) | 0.6006 (2) | 0.63697 (14) | 0.056 (1) | |
F14 | 0.9388 (7) | 0.5468 (2) | 0.59029 (19) | 0.087 (3) | |
C15 | 1.0698 (6) | 0.6045 (2) | 0.68028 (16) | 0.056 (1) | |
H15 | 1.197 (2) | 0.5687 (9) | 0.6750 (6) | 0.067 (2) | |
C16 | 1.0500 (6) | 0.6600 (2) | 0.73206 (14) | 0.056 (1) | |
H16 | 1.154 (2) | 0.6641 (10) | 0.7616 (6) | 0.067 (2) | |
C2 | 0.9265 (8) | 0.7650 (3) | 0.8447 (2) | 0.056 (1) | |
O2 | 1.0908 (9) | 0.7290 (4) | 0.8662 (2) | 0.056 (1) | |
C3 | 0.7580 (7) | 0.8320 (3) | 0.86934 (17) | 0.056 (1) | |
H3 | 0.816 (2) | 0.8915 (9) | 0.8726 (6) | 0.067 (2) | |
C31 | 0.6498 (6) | 0.8061 (2) | 0.93088 (18) | 0.056 (1) | |
H31b | 0.769 (3) | 0.7934 (9) | 0.9600 (7) | 0.067 (2) | |
H31a | 0.565 (3) | 0.7570 (8) | 0.9241 (5) | 0.067 (2) | |
C32 | 0.5114 (6) | 0.8750 (2) | 0.95722 (17) | 0.056 (1) | |
H32a | 0.442 (2) | 0.9055 (8) | 0.9234 (6) | 0.067 (2) | |
H32b | 0.402 (3) | 0.8518 (8) | 0.9834 (7) | 0.067 (2) | |
C33 | 0.6517 (6) | 0.9325 (2) | 0.99593 (16) | 0.056 (1) | |
H33a | 0.789 (2) | 0.9477 (10) | 0.9727 (6) | 0.067 (2) | |
H33b | 0.638 (2) | 0.8544 (9) | 1.0767 (6) | 0.067 (2) | |
C34 | 0.5467 (6) | 1.0118 (2) | 1.01939 (15) | 0.056 (1) | |
C35 | 0.6513 (6) | 1.0895 (2) | 1.00967 (12) | 0.056 (1) | |
H35 | 0.793 (2) | 1.0912 (9) | 0.9856 (6) | 0.067 (2) | |
C36 | 0.5501 (6) | 1.1644 (2) | 1.03423 (14) | 0.056 (1) | |
H36 | 0.613 (3) | 1.2194 (8) | 1.0287 (6) | 0.067 (2) | |
C37 | 0.3510 (6) | 1.1575 (2) | 1.06703 (13) | 0.056 (1) | |
F37 | 0.2580 (7) | 1.2276 (3) | 1.09075 (16) | 0.087 (3) | |
C38 | 0.2490 (5) | 1.0826 (2) | 1.07628 (15) | 0.056 (1) | |
H38 | 0.117 (2) | 1.0787 (9) | 1.0978 (6) | 0.067 (2) | |
C39 | 0.3468 (6) | 1.0104 (2) | 1.05259 (14) | 0.056 (1) | |
H39 | 0.273 (2) | 0.9611 (9) | 1.0596 (5) | 0.067 (2) | |
O33 | 0.7337 (7) | 0.8871 (3) | 1.0496 (2) | 0.056 (1) | |
C4 | 0.6449 (6) | 0.8157 (2) | 0.80320 (16) | 0.056 (1) | |
H4 | 0.508 (2) | 0.7833 (9) | 0.8087 (6) | 0.067 (2) | |
C41 | 0.6082 (6) | 0.8903 (2) | 0.76234 (16) | 0.056 (1) | |
C42 | 0.4144 (6) | 0.9347 (2) | 0.76716 (16) | 0.056 (1) | |
H42 | 0.306 (2) | 0.9188 (9) | 0.7953 (6) | 0.067 (2) | |
C43 | 0.3687 (5) | 1.0031 (2) | 0.73212 (15) | 0.056 (1) | |
H43 | 0.242 (3) | 1.0287 (9) | 0.7376 (6) | 0.067 (2) | |
C44 | 0.5156 (7) | 1.0332 (2) | 0.68926 (16) | 0.056 (1) | |
H44 | 0.511 (6) | 1.1066 (8) | 0.6092 (6) | 0.067 (2) | |
O44 | 0.4729 (9) | 1.1015 (3) | 0.65419 (17) | 0.056 (1) | |
H45 | 0.807 (3) | 1.0136 (9) | 0.6529 (6) | 0.067 (2) | |
C45 | 0.7119 (6) | 0.9916 (2) | 0.68256 (16) | 0.056 (1) | |
C46 | 0.7626 (6) | 0.9189 (2) | 0.71895 (15) | 0.056 (1) | |
H46 | 0.906 (2) | 0.8889 (9) | 0.7132 (6) | 0.067 (2) | |
Geometric parameters (Å, º) top
N1—C11 | 1.378 (5) | C33—O33 | 1.439 (6) |
N1—C2 | 1.343 (6) | H33b—O33 | 0.97 (1) |
N1—C4 | 1.468 (6) | C34—C35 | 1.398 (5) |
C11—C12 | 1.399 (5) | C34—C39 | 1.384 (5) |
C11—C16 | 1.367 (5) | C35—H35 | 0.99 (1) |
C12—H12 | 0.97 (1) | C35—C36 | 1.434 (5) |
C12—C13 | 1.425 (5) | C36—H36 | 0.96 (1) |
C13—H13 | 0.91 (1) | C36—C37 | 1.380 (5) |
C13—C14 | 1.313 (5) | C37—F37 | 1.343 (5) |
C14—F14 | 1.327 (5) | C37—C38 | 1.350 (5) |
C14—C15 | 1.337 (5) | C38—H38 | 0.91 (1) |
C15—H15 | 0.95 (1) | C38—C39 | 1.383 (5) |
C15—C16 | 1.420 (5) | C39—H39 | 0.91 (1) |
C16—H16 | 0.89 (1) | C4—H4 | 0.97 (1) |
C2—O2 | 1.222 (7) | C4—C41 | 1.488 (5) |
C2—C3 | 1.554 (6) | C41—C42 | 1.355 (5) |
C3—H3 | 1.01 (1) | C41—C46 | 1.382 (5) |
C3—C31 | 1.521 (5) | C42—H42 | 0.92 (1) |
C3—C4 | 1.587 (5) | C42—C43 | 1.347 (5) |
C31—H31b | 0.96 (1) | C43—H43 | 0.87 (2) |
C31—H31a | 0.94 (1) | C43—C44 | 1.354 (5) |
C31—C32 | 1.481 (5) | C44—O44 | 1.343 (5) |
C32—H32a | 0.97 (1) | C44—C45 | 1.349 (5) |
C32—H32b | 0.93 (1) | H44—O44 | 0.99 (1) |
C32—C33 | 1.489 (5) | H45—C45 | 0.92 (1) |
C33—H33a | 0.99 (1) | C45—C46 | 1.426 (5) |
C33—C34 | 1.493 (5) | C46—H46 | 0.98 (1) |
| | | |
C11—N1—C2 | 134.3 (4) | H33a—C33—O33 | 104.1 (9) |
C11—N1—C4 | 128.4 (3) | C34—C33—O33 | 107.3 (3) |
C2—N1—C4 | 94.0 (3) | C33—C34—C35 | 120.6 (3) |
N1—C11—C12 | 121.2 (3) | C33—C34—C39 | 121.2 (3) |
N1—C11—C16 | 119.3 (3) | C35—C34—C39 | 118.2 (3) |
C12—C11—C16 | 119.5 (3) | C34—C35—H35 | 118.8 (9) |
C11—C12—H12 | 117.2 (9) | C34—C35—C36 | 119.5 (3) |
C11—C12—C13 | 119.7 (3) | H35—C35—C36 | 121.7 (9) |
H12—C12—C13 | 123.1 (9) | C35—C36—H36 | 123.3 (9) |
C12—C13—H13 | 125.1 (8) | C35—C36—C37 | 118.7 (3) |
C12—C13—C14 | 118.9 (3) | H36—C36—C37 | 118.0 (9) |
H13—C13—C14 | 116.0 (8) | C36—C37—F37 | 118.6 (3) |
C13—C14—F14 | 120.2 (3) | C36—C37—C38 | 122.0 (3) |
C13—C14—C15 | 123.0 (3) | F37—C37—C38 | 119.4 (3) |
F14—C14—C15 | 116.9 (3) | C37—C38—H38 | 121.4 (9) |
C14—C15—H15 | 117.3 (9) | C37—C38—C39 | 119.3 (3) |
C14—C15—C16 | 120.6 (3) | H38—C38—C39 | 119.4 (9) |
H15—C15—C16 | 122.0 (9) | C34—C39—C38 | 122.4 (3) |
C11—C16—C15 | 118.4 (3) | C34—C39—H39 | 120.7 (9) |
C11—C16—H16 | 119 (1) | C38—C39—H39 | 116.9 (9) |
C15—C16—H16 | 123 (1) | C33—O33—H33b | 123.2 (9) |
N1—C2—O2 | 130.2 (5) | N1—C4—C3 | 88.6 (3) |
N1—C2—C3 | 94.6 (4) | N1—C4—H4 | 112.1 (8) |
O2—C2—C3 | 135.1 (5) | N1—C4—C41 | 115.9 (3) |
C2—C3—H3 | 116.4 (8) | C3—C4—H4 | 109.5 (8) |
C2—C3—C31 | 112.4 (3) | C3—C4—C41 | 117.1 (3) |
C2—C3—C4 | 81.9 (3) | H4—C4—C41 | 111.8 (8) |
H3—C3—C31 | 109.8 (8) | C4—C41—C42 | 119.7 (3) |
H3—C3—C4 | 111.0 (8) | C4—C41—C46 | 123.9 (3) |
C31—C3—C4 | 123.2 (3) | C42—C41—C46 | 116.4 (3) |
C3—C31—H31b | 107.7 (9) | C41—C42—H42 | 120.3 (9) |
C3—C31—H31a | 108.6 (9) | C41—C42—C43 | 123.3 (3) |
C3—C31—C32 | 111.3 (3) | H42—C42—C43 | 116.4 (9) |
H31b—C31—H31a | 109 (1) | C42—C43—H43 | 119 (1) |
H31b—C31—C32 | 108.5 (9) | C42—C43—C44 | 122.1 (3) |
H31a—C31—C32 | 111.8 (9) | H43—C43—C44 | 119 (1) |
C31—C32—H32a | 109.0 (8) | C43—C44—O44 | 122.8 (4) |
C31—C32—H32b | 108.9 (9) | C43—C44—C45 | 117.2 (3) |
C31—C32—C33 | 110.7 (3) | O44—C44—C45 | 120.0 (4) |
H32a—C32—H32b | 110 (1) | C44—O44—H44 | 124 (1) |
H32a—C32—C33 | 110.5 (8) | C44—C45—H45 | 114.9 (9) |
H32b—C32—C33 | 107.4 (9) | C44—C45—C46 | 121.5 (3) |
C32—C33—H33a | 109.5 (9) | H45—C45—C46 | 123.6 (9) |
C32—C33—C34 | 118.1 (3) | C41—C46—C45 | 119.5 (3) |
C32—C33—O33 | 108.9 (3) | C41—C46—H46 | 120.0 (8) |
H33a—C33—C34 | 108.1 (9) | C45—C46—H46 | 120.5 (8) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O44—H44···O33i | 0.99 (1) | 1.99 (3) | 2.842 (6) | 143 (2) |
O33—H33b···O2ii | 0.97 (1) | 1.82 (1) | 2.715 (7) | 152 (1) |
Symmetry codes: (i) −x+3/2, −y+2, z−1/2; (ii) x−1/2, −y+3/2, −z+2. |
Comparison of selected torsions (°) of (I) anhydrate and (I).H2O. topTorsion | (I) | (I).H2O |
C3—C31—C32—C33 | -86.6 (4) | -167.1 (3) |
C34—C33—C32—C31 | 172.2 (3) | 167.8 (2) |
C35—C34—C33—C32 | -128.2 (4) | -63.3 (4) |
O33—C33—C32—C31 | -65.2 (4) | -68.9 (3) |
N1—C4—C41—C46 | -11.8 (5) | -23.9 (4) |
C31—C3—C4—C41 | 123.6 (4) | 120.4 (3) |
C4—N1—C11—C12 | 3.8 (6) | 6.4 (4) |