Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270111027491/lg3062sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270111027491/lg30621sup2.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270111027491/lg30622sup3.hkl |
CCDC references: 842151; 842152
n-Hexane, diethyl ether and absolute ethanol were predried over activated 4 Å molecular sieves and then distilled from sodium and kept under a nitrogen atmosphere. The synthetic procedure followed for the synthesis of 2-(N-aryl)iminopyrroles (1) and (2) was that used previously by our group (Bellabarba et al., 2003; Carabineiro et al., 2007, 2008; Gomes et al., 2010). 2-Formylpyrrole [10.5 mmol in the case of (1) and 14.4 mmol in the case of (2)], aniline (1 equivalent), a catalytic amount of p-toluenesulfonic acid and MgSO4 (to remove the water formed during the reaction mixture) were suspended in absolute ethanol in a round-bottom flask fitted with a condenser and a CaCl2 guard tube. The mixture was heated to reflux overnight. After cooling to room temperature, CH2Cl2 was added and the suspension filtered through Celite and washed through with more CH2Cl2. After removal of all volatiles, the product was dissolved in refluxing n-hexane. In the case of (1), the resulting solution was stored at 253 K, yielding yellow prismatic crystals (yield 54%). However, in the case of (2), the product, which was an oil, was insoluble in n-hexane and partially soluble in diethyl ether. After evaporation of these solvents, the initial oil was transformed into a brown solid, which was purified by sublimation at a temperature of 353 K and a pressure of 10 Pa (yield 49%). Yellow crystals of (2) suitable for X-ray diffraction were obtained by recrystallization in diethyl ether at 253 K.
NMR data for (1): 1H (300 MHz, CDCl3): δH 9.98 (br s, 1H, NH), 8.25 (s, 1H, CH = N), 7.19–7.13 (m, 2H, m-phenyl), 7.10–7.02 (m, 2H, o-phenyl), 6.86 (br s, 1H, H5), 6.69 (dd, JHH = 1.38 Hz, 1H, H3), 6.29 (dd, JHH = 2.49 Hz, 1H, H4). 13C{1H} (75 MHz, CDCl3): δC 160.9 (d, 1JCF = 242 Hz, p-phenyl), 149.8 (CH = N), 147.8 (ipso-phenyl), 130.7 (C2), 123.3 (C3), 122.2 (d, 3JCF = 8 Hz, o-phenyl), 116.8 (C4), 115.9 (d, 2JCF = 22 Hz, m-phenyl), 110.5 (C5).
NMR data for (2): 1H (300 MHz, CDCl3)]: δH 9.53 (br s, 1H, NH), 8.21 (s, 1H, CH = N), 7.67–7.63 (m, 2H, m-phenyl), 7.22–7.18 (m, 2H, o-phenyl), 7.03 (d, JHH = 10.8 Hz, 1H, H5), 6.76 (dd, JHH = 1.2 Hz, 1H, H3), 6.34 (m, 1H, H4). 13C{1H} (75 MHz, CDCl3): δC 155.7 (ipso-phenyl), 151.1 (CH = N), 133.4 (m-phenyl), 130.4 (C2), 124.2 (C3), 121.7 (o-phenyl), 119.2 (C4), 118.2 (C≡N), 111.1 (p-phenyl), 108.4 (C5).
All H atoms, except the pyrrole NH atoms, were inserted in idealized positions and allowed to refine as riding on their parent C atoms, with C—H distances of 0.95 Å for aromatic H atoms, and with Uiso(H) = 1.2Ueq(C). The H atoms of the Npyrrole were located in the difference Fourier map and allowed to refine freely.
Pyrrole and its substituted derivatives are well known five-membered heterocyclic compounds, which are involved in a wide range of applications, in areas such as natural products, bioactive molecules, pharmaceuticals, anion-binding systems etc. (Rao & Jothilingam, 2001; Braun et al., 2001; Hewton et al., 2002; Sessler et al., 2005). Moreover, 2-(N-aryl or N-alkyl)iminopyrroles, (I) (Fig. 1), are usually employed as ligand precursors in the preparation of coordination compounds, generally after deprotonation of the pyrrole NH (Mashima & Tsurugi, 2005). The synthethic strategy for the preparation of these iminopyrrole derivatives is very straightforward, consisting of a Vilsmeier–Haack acylation (Garrido et al., 1984), followed by a condensation reaction with a suitable aliphatic or aromatic amine. The resulting complexes are mostly used as precatalysts in polymerization reactions (Mashima & Tsurugi, 2005; Matsugi & Fujita, 2008), but they can also have applications, for example, in luminescence (Wu et al., 2003, 2004).
Recently, we reported the synthesis of new Ni (Bellabarba et al., 2003), Co (Carabineiro et al., 2007, 2008), Na (Gomes et al., 2010) and Zn (Gomes et al., 2009) complexes containing 2-(N-aryl)iminopyrrolyl ligands, where the Ni derivatives were active in the oligomerization of ethylene and the Zn ones showed luminescent properties. In these publications, we also reported the molecular structure of some ligand precursors, namely 2-[N-(mesitylimino)ethyl]pyrrole, 2-[N-(2,6-diisopropylphenylimino)ethyl]pyrrole, two polymorphs of 2-[N-(phenylimino)methyl]pyrrole and 2-[N-(2,6-diisopropylphenylimino)methyl]pyrrole, which can be found in the Cambridge Structural Database (CSD, Version 5.32; Allen, 2002) with refcodes UMUKUI (Bellabarba et al., 2003), LILYUB (Carabineiro et al., 2007), CUKHUM (Gomes et al., 2010), CUKHUM01 (Gomes et al., 2010) and CUKJEY (Gomes et al., 2010), respectively (Fig. 1).
In the present work, we report the crystal structures of 2-[N-(4-fluorophenylimino)methyl]pyrrole, (1), and 2-[N-(4-cyanophenylimino)methyl]pyrrole, (2), in which the para positions of the phenyl rings are substituted by the electron-withdrawing groups F and C≡N (nitrile). The corresponding molecular structures are depicted in Figs. 2 and 3, respectively. In both compounds the asymmetric unit contains two independent molecules, where the pyrrole moieties show planar backbones with similar features. A brief analysis of the bond distances and angles in these derivatives (Table 1) reveals that the longest bond length in the pyrrole ring is C3—C4, with values ranging from 1.390 (3) to 1.397 (2) Å, and that the shortest one is N1—C5. The imine distance varies between 1.2809 (19) and 1.290 (2) Å (Table 1). The torsion angles N2—C6—C2—N1 of -2.6 (3) and -2.4 (3)° [molecules A and B of (1)] and -4.1 (2) and -0.3 (3)° [molecules A and B of (2)] show that the pyrrole ring and the formimino group are nearly coplanar. The C2—C6 distances in the range 1.416 (2)–1.426 (2) Å are slightly shorter than the normal values for typical C—C single bonds, indicating an extension of the pyrrole ring π-electron delocalization towards the formimino substituent. For both compounds (1) and (2), the phenyl substituent of the iminic fragment lies around 45° relative to the pyrrole ring [dihedral angles of 49.08 (9), 45.33 (10), 52.05 (9) and 39.10 (10)° for molecules A and B of (1) and (2), respectively]. In fact, this is also verified [true?] for CUKHUM [46.97 (7) and 45.31 (8)°] and CUKHUM01 [41.96 (12), 8.93 (12), 47.96 (13) and 41.28 (12)°] that do not present any substituents in the phenyl ring, but it differs [is not the case for] from UMUKUI [85.66 (8)°], LILYUB [86.54 (9) and 83.48 (9)°] and CUKJEY [83.84 (10) and 86.17 (9)°], in which the phenyl rings are rotated about the Nimine—Cipso-phenyl bond, being nearly perpendicular to the formiminopyrrole plane defined by atoms N2—C6—C2—N1, due to the high steric hindrance exerted by the alkyl 2,6-substituting groups (Bellabarba et al., 2003; Carabineiro et al., 2007; Gomes et al., 2010). The value of 8.93 (12)° found in one of the four molecules of polymorph CUKHUM01, which is substantially different from all the others, making the phenyl ring almost coplanar with the iminopyrrole fragment, is due to the supramolecular arrangement.
It is known from the literature (Bellabarba et al., 2003; Munro et al., 2006; Carabineiro et al., 2007; Gomes et al., 2010) that these types of organic derivatives assemble as formiminopyrrole dimers through the formation of two complementary hydrogen bonds between a pyrrole NH and the imine nitrogen belonging to the other molecule of the pair. In agreement with this, both compounds (1) and (2) show dimerization of the iminopyrrole molecules through an R22(10) motif as can be seen in Figs. 4 and 5. However, in contrast to what is observed in the more hindered derivatives UMUKUI, LILYUB or CUKJEY, in which the iminopyrrole molecules of the dimer are coplanar, in (1) and (2), and also in CUKHUM, both molecules composing each dimer are not coplanar, the wings of the pyrrole moieties making an angle of 150.55 (10), 138.77 (10) and 151.94 (8)°, in the cases of (1), (2) and CUKHUM, respectively.
In compound (1), the most important observed intermolecular interactions are the two complementary hydrogen bonds N1A—H1A···N2B and N1B—H1B···N2A (Table 2). However, a C—H···F short contact is found with H···F distances and C—H···F angles within the limits reported in the literature for this type of contact (Shimoni & Glusker, 1994; Howard et al., 1996; Dunitz & Taylor, 1997). In fact, these interactions, always involving molecule B, occur between the fluorine atom and the pyrrole NH at position 3 of the neighbouring dimer, forming one-dimensional chains in the b direction (Fig. 4). Conversely, in derivative (2), in addition to the two hydrogen bonds N1A—H1A···N2B and N1B—H1B···N2A, one can also notice the existence of a weak intermolecular hydrogen bond of the type C—H···N, forming chains in the (110) direction, in which a nitrile group interacts weakly with an aromatic meta-hydrogen atom of the neighbouring dimer (Fig. 5), the latter having a more electropositive character than the corresponding hydrogen of derivative (1), due to the proximity of the more powerful electron-withdrawing nitrile group. This is in agreement with the 1H and 13C NMR data for the corresponding meta-proton and meta-carbon nuclei that are clearly more deshielded in compound (2) than in (1) [δ 1H 7.67–7.63 versus 7.19–7.13 and δ 13C 133.4 versus 116.8 p.p.m. for (2) and (1), respectively] (Figs. 4 and 5).
Moreover, comparing these two crystal structures with VIYWUW (Heinze et al., 2008), an iminopyrrole derivative containing a hydroxy substituent in the para position of the phenyl ring (see Fig. 1), it is possible to notice that the phenyl substituent of the iminic fragment also lies around 45° relative to the pyrrole ring [dihedral angle of 49.59 (5)°], and that all the distances within the molecule are in agreement with the ones observed for the derivatives discussed above. On the other hand, the formation of dimers through the establishment of complementary N—H···N hydrogen bonds is disabled in this compound, due to the presence of the para-hydroxy substituent, which is involved in three different interactions: O—H···N, N—H···O and C—H···O. Additionally, similarly to derivative (2), this compound also forms an infinite one-dimensional chain.
For related literature, see: Allen (2002); Bellabarba et al. (2003); Braun et al. (2001); Carabineiro et al. (2007, 2008); Dunitz & Taylor (1997); Garrido et al. (1984); Gomes et al. (2009, 2010); Heinze et al. (2008); Hewton et al. (2002); Howard et al. (1996); Mashima & Tsurugi (2005); Matsugi & Fujita (2008); Munro et al. (2006); Rao & Jothilingam (2001); Sessler et al. (2005); Shimoni & Glusker (1994); Wu et al. (2003, 2004).
For both compounds, data collection: APEX2 (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SIR2004 (Burla et al., 2005); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997), Mercury (Macrae et al., 2006); software used to prepare material for publication: enCIFer (Allen et al., 2004), PLATON (Spek, 2009), publCIF (Westrip, 2010).
C11H9FN2 | F(000) = 1568 |
Mr = 188.20 | Dx = 1.322 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 5510 reflections |
a = 9.5542 (5) Å | θ = 2.6–24.5° |
b = 18.7198 (9) Å | µ = 0.09 mm−1 |
c = 21.1509 (12) Å | T = 150 K |
V = 3782.9 (3) Å3 | Prism, yellow |
Z = 16 | 0.60 × 0.60 × 0.30 mm |
Bruker APEXII CCD diffractometer | 3605 independent reflections |
Radiation source: fine-focus sealed tube | 2479 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.040 |
φ and ω scans | θmax = 25.7°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→8 |
Tmin = 0.946, Tmax = 0.972 | k = −22→22 |
21637 measured reflections | l = −25→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.100 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0428P)2 + 1.0348P] where P = (Fo2 + 2Fc2)/3 |
3605 reflections | (Δ/σ)max < 0.001 |
261 parameters | Δρmax = 0.14 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
C11H9FN2 | V = 3782.9 (3) Å3 |
Mr = 188.20 | Z = 16 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 9.5542 (5) Å | µ = 0.09 mm−1 |
b = 18.7198 (9) Å | T = 150 K |
c = 21.1509 (12) Å | 0.60 × 0.60 × 0.30 mm |
Bruker APEXII CCD diffractometer | 3605 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2479 reflections with I > 2σ(I) |
Tmin = 0.946, Tmax = 0.972 | Rint = 0.040 |
21637 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.100 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.14 e Å−3 |
3605 reflections | Δρmin = −0.26 e Å−3 |
261 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1A | 1.03248 (12) | 0.42197 (6) | 0.28313 (6) | 0.0557 (3) | |
N1A | 0.56108 (15) | 0.72610 (7) | 0.48332 (7) | 0.0287 (3) | |
H1A | 0.586 (2) | 0.6908 (10) | 0.5105 (9) | 0.049 (6)* | |
N2A | 0.73050 (14) | 0.62264 (7) | 0.41712 (6) | 0.0270 (3) | |
C2A | 0.58678 (17) | 0.72689 (8) | 0.41955 (8) | 0.0272 (4) | |
C3A | 0.51704 (19) | 0.78509 (9) | 0.39466 (9) | 0.0371 (4) | |
H3A | 0.5165 | 0.7994 | 0.3516 | 0.045* | |
C4A | 0.44754 (19) | 0.81906 (9) | 0.44424 (9) | 0.0386 (5) | |
H4A | 0.3912 | 0.8607 | 0.4411 | 0.046* | |
C5A | 0.47535 (18) | 0.78145 (8) | 0.49797 (9) | 0.0337 (4) | |
H5A | 0.4404 | 0.7922 | 0.5389 | 0.040* | |
C6A | 0.66890 (17) | 0.67416 (8) | 0.38832 (8) | 0.0275 (4) | |
H6A | 0.6787 | 0.6773 | 0.3437 | 0.033* | |
C7A | 0.80580 (17) | 0.57235 (8) | 0.38029 (8) | 0.0254 (4) | |
C8A | 0.75076 (19) | 0.54081 (9) | 0.32625 (8) | 0.0313 (4) | |
H8A | 0.6606 | 0.5544 | 0.3117 | 0.038* | |
C9A | 0.8268 (2) | 0.48964 (9) | 0.29347 (9) | 0.0373 (5) | |
H9A | 0.7895 | 0.4675 | 0.2567 | 0.045* | |
C10A | 0.95652 (19) | 0.47202 (9) | 0.31549 (9) | 0.0361 (5) | |
C11A | 1.01431 (19) | 0.50139 (9) | 0.36859 (9) | 0.0367 (5) | |
H11A | 1.1050 | 0.4877 | 0.3825 | 0.044* | |
C12A | 0.93700 (18) | 0.55151 (8) | 0.40154 (9) | 0.0320 (4) | |
H12A | 0.9741 | 0.5719 | 0.4391 | 0.038* | |
F1B | 0.43545 (13) | 0.84707 (6) | 0.76254 (5) | 0.0622 (4) | |
N1B | 0.67720 (15) | 0.51369 (7) | 0.51762 (7) | 0.0300 (4) | |
H1B | 0.688 (2) | 0.5555 (10) | 0.4948 (9) | 0.049 (6)* | |
N2B | 0.59266 (14) | 0.63280 (7) | 0.59716 (7) | 0.0306 (3) | |
C2B | 0.62340 (17) | 0.50791 (9) | 0.57743 (8) | 0.0285 (4) | |
C3B | 0.62831 (18) | 0.43651 (9) | 0.59385 (9) | 0.0361 (5) | |
H3B | 0.5981 | 0.4165 | 0.6328 | 0.043* | |
C4B | 0.68550 (18) | 0.39911 (9) | 0.54310 (9) | 0.0375 (5) | |
H4B | 0.7016 | 0.3491 | 0.5411 | 0.045* | |
C5B | 0.71399 (19) | 0.44778 (9) | 0.49680 (9) | 0.0354 (4) | |
H5B | 0.7532 | 0.4372 | 0.4566 | 0.042* | |
C6B | 0.58091 (17) | 0.56759 (9) | 0.61470 (8) | 0.0306 (4) | |
H6B | 0.5414 | 0.5584 | 0.6551 | 0.037* | |
C7B | 0.54764 (18) | 0.68666 (9) | 0.64002 (8) | 0.0304 (4) | |
C8B | 0.42534 (19) | 0.68138 (10) | 0.67512 (8) | 0.0365 (5) | |
H8B | 0.3669 | 0.6407 | 0.6706 | 0.044* | |
C9B | 0.3882 (2) | 0.73533 (11) | 0.71683 (9) | 0.0447 (5) | |
H9B | 0.3060 | 0.7314 | 0.7419 | 0.054* | |
C10B | 0.4720 (2) | 0.79401 (10) | 0.72115 (9) | 0.0428 (5) | |
C11B | 0.5908 (2) | 0.80278 (10) | 0.68589 (9) | 0.0406 (5) | |
H11B | 0.6458 | 0.8448 | 0.6894 | 0.049* | |
C12B | 0.62817 (19) | 0.74816 (10) | 0.64481 (9) | 0.0364 (4) | |
H12B | 0.7100 | 0.7529 | 0.6196 | 0.044* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1A | 0.0593 (8) | 0.0483 (7) | 0.0595 (8) | 0.0122 (6) | 0.0211 (6) | −0.0166 (6) |
N1A | 0.0323 (8) | 0.0250 (7) | 0.0287 (9) | 0.0036 (6) | −0.0006 (7) | −0.0012 (7) |
N2A | 0.0264 (8) | 0.0272 (7) | 0.0274 (8) | 0.0002 (6) | 0.0015 (6) | −0.0026 (6) |
C2A | 0.0277 (9) | 0.0265 (8) | 0.0273 (10) | −0.0011 (7) | −0.0008 (8) | −0.0009 (7) |
C3A | 0.0427 (11) | 0.0347 (9) | 0.0341 (11) | 0.0059 (8) | −0.0049 (9) | 0.0043 (8) |
C4A | 0.0387 (11) | 0.0318 (9) | 0.0454 (12) | 0.0104 (8) | −0.0065 (9) | −0.0036 (9) |
C5A | 0.0342 (10) | 0.0292 (9) | 0.0378 (11) | 0.0061 (8) | 0.0009 (8) | −0.0074 (8) |
C6A | 0.0280 (9) | 0.0286 (8) | 0.0260 (10) | −0.0031 (7) | 0.0025 (8) | 0.0000 (8) |
C7A | 0.0253 (9) | 0.0247 (8) | 0.0262 (10) | −0.0017 (7) | 0.0040 (7) | 0.0006 (7) |
C8A | 0.0283 (10) | 0.0374 (9) | 0.0281 (10) | −0.0019 (8) | 0.0025 (8) | −0.0023 (8) |
C9A | 0.0410 (11) | 0.0390 (10) | 0.0318 (11) | −0.0054 (9) | 0.0073 (9) | −0.0104 (8) |
C10A | 0.0380 (11) | 0.0293 (9) | 0.0411 (12) | 0.0020 (8) | 0.0163 (9) | −0.0086 (8) |
C11A | 0.0264 (10) | 0.0341 (9) | 0.0497 (13) | 0.0021 (8) | 0.0037 (9) | −0.0010 (9) |
C12A | 0.0306 (10) | 0.0294 (9) | 0.0360 (11) | −0.0013 (8) | −0.0012 (8) | −0.0043 (8) |
F1B | 0.0832 (9) | 0.0621 (7) | 0.0412 (7) | 0.0328 (7) | −0.0037 (6) | −0.0151 (6) |
N1B | 0.0336 (8) | 0.0260 (7) | 0.0303 (9) | −0.0022 (6) | −0.0009 (7) | 0.0018 (7) |
N2B | 0.0305 (8) | 0.0340 (8) | 0.0274 (8) | −0.0013 (6) | 0.0010 (6) | 0.0003 (7) |
C2B | 0.0226 (9) | 0.0339 (9) | 0.0289 (10) | −0.0021 (7) | −0.0026 (8) | 0.0056 (8) |
C3B | 0.0279 (10) | 0.0378 (10) | 0.0427 (12) | −0.0037 (8) | −0.0032 (8) | 0.0130 (9) |
C4B | 0.0343 (11) | 0.0264 (9) | 0.0518 (13) | −0.0023 (8) | −0.0061 (9) | 0.0040 (9) |
C5B | 0.0374 (11) | 0.0302 (9) | 0.0385 (11) | 0.0000 (8) | −0.0036 (8) | −0.0045 (8) |
C6B | 0.0225 (9) | 0.0408 (10) | 0.0285 (10) | −0.0014 (8) | 0.0000 (8) | 0.0060 (8) |
C7B | 0.0336 (10) | 0.0359 (9) | 0.0216 (9) | 0.0052 (8) | −0.0020 (8) | 0.0043 (8) |
C8B | 0.0357 (11) | 0.0415 (10) | 0.0322 (11) | 0.0067 (8) | 0.0028 (9) | 0.0088 (9) |
C9B | 0.0479 (12) | 0.0541 (12) | 0.0322 (12) | 0.0197 (10) | 0.0085 (9) | 0.0093 (10) |
C10B | 0.0579 (14) | 0.0436 (11) | 0.0268 (11) | 0.0236 (10) | −0.0058 (10) | −0.0025 (9) |
C11B | 0.0467 (12) | 0.0386 (10) | 0.0364 (11) | 0.0070 (9) | −0.0106 (10) | −0.0026 (9) |
C12B | 0.0365 (11) | 0.0401 (10) | 0.0326 (11) | 0.0027 (9) | −0.0010 (9) | 0.0005 (9) |
F1A—C10A | 1.3685 (19) | F1B—C10B | 1.369 (2) |
N1A—C5A | 1.357 (2) | N1B—C5B | 1.356 (2) |
N1A—C2A | 1.371 (2) | N1B—C2B | 1.370 (2) |
N1A—H1A | 0.91 (2) | N1B—H1B | 0.92 (2) |
N2A—C6A | 1.284 (2) | N2B—C6B | 1.281 (2) |
N2A—C7A | 1.418 (2) | N2B—C7B | 1.422 (2) |
C2A—C3A | 1.381 (2) | C2B—C3B | 1.382 (2) |
C2A—C6A | 1.423 (2) | C2B—C6B | 1.426 (2) |
C3A—C4A | 1.395 (3) | C3B—C4B | 1.393 (3) |
C3A—H3A | 0.9500 | C3B—H3B | 0.9500 |
C4A—C5A | 1.363 (3) | C4B—C5B | 1.365 (2) |
C4A—H4A | 0.9500 | C4B—H4B | 0.9500 |
C5A—H5A | 0.9500 | C5B—H5B | 0.9500 |
C6A—H6A | 0.9500 | C6B—H6B | 0.9500 |
C7A—C12A | 1.388 (2) | C7B—C8B | 1.388 (2) |
C7A—C8A | 1.390 (2) | C7B—C12B | 1.388 (2) |
C8A—C9A | 1.388 (2) | C8B—C9B | 1.387 (3) |
C8A—H8A | 0.9500 | C8B—H8B | 0.9500 |
C9A—C10A | 1.365 (3) | C9B—C10B | 1.362 (3) |
C9A—H9A | 0.9500 | C9B—H9B | 0.9500 |
C10A—C11A | 1.367 (3) | C10B—C11B | 1.367 (3) |
C11A—C12A | 1.383 (2) | C11B—C12B | 1.389 (3) |
C11A—H11A | 0.9500 | C11B—H11B | 0.9500 |
C12A—H12A | 0.9500 | C12B—H12B | 0.9500 |
C5A—N1A—C2A | 108.94 (15) | C5B—N1B—C2B | 108.98 (15) |
C5A—N1A—H1A | 124.8 (12) | C5B—N1B—H1B | 124.9 (12) |
C2A—N1A—H1A | 125.7 (12) | C2B—N1B—H1B | 126.1 (12) |
C6A—N2A—C7A | 118.09 (14) | C6B—N2B—C7B | 117.68 (15) |
N1A—C2A—C3A | 107.28 (15) | N1B—C2B—C3B | 107.20 (16) |
N1A—C2A—C6A | 123.21 (15) | N1B—C2B—C6B | 123.74 (15) |
C3A—C2A—C6A | 129.50 (16) | C3B—C2B—C6B | 128.93 (17) |
C2A—C3A—C4A | 107.63 (16) | C2B—C3B—C4B | 107.80 (16) |
C2A—C3A—H3A | 126.2 | C2B—C3B—H3B | 126.1 |
C4A—C3A—H3A | 126.2 | C4B—C3B—H3B | 126.1 |
C5A—C4A—C3A | 107.37 (15) | C5B—C4B—C3B | 107.19 (16) |
C5A—C4A—H4A | 126.3 | C5B—C4B—H4B | 126.4 |
C3A—C4A—H4A | 126.3 | C3B—C4B—H4B | 126.4 |
N1A—C5A—C4A | 108.77 (16) | N1B—C5B—C4B | 108.82 (17) |
N1A—C5A—H5A | 125.6 | N1B—C5B—H5B | 125.6 |
C4A—C5A—H5A | 125.6 | C4B—C5B—H5B | 125.6 |
N2A—C6A—C2A | 123.62 (16) | N2B—C6B—C2B | 124.17 (16) |
N2A—C6A—H6A | 118.2 | N2B—C6B—H6B | 117.9 |
C2A—C6A—H6A | 118.2 | C2B—C6B—H6B | 117.9 |
C12A—C7A—C8A | 119.26 (15) | C8B—C7B—C12B | 119.12 (16) |
C12A—C7A—N2A | 117.83 (15) | C8B—C7B—N2B | 123.02 (16) |
C8A—C7A—N2A | 122.81 (15) | C12B—C7B—N2B | 117.82 (15) |
C9A—C8A—C7A | 120.40 (17) | C9B—C8B—C7B | 120.24 (18) |
C9A—C8A—H8A | 119.8 | C9B—C8B—H8B | 119.9 |
C7A—C8A—H8A | 119.8 | C7B—C8B—H8B | 119.9 |
C10A—C9A—C8A | 118.16 (17) | C10B—C9B—C8B | 118.64 (19) |
C10A—C9A—H9A | 120.9 | C10B—C9B—H9B | 120.7 |
C8A—C9A—H9A | 120.9 | C8B—C9B—H9B | 120.7 |
C9A—C10A—C11A | 123.36 (16) | C9B—C10B—C11B | 123.21 (18) |
C9A—C10A—F1A | 118.46 (17) | C9B—C10B—F1B | 118.54 (19) |
C11A—C10A—F1A | 118.17 (17) | C11B—C10B—F1B | 118.25 (19) |
C10A—C11A—C12A | 118.12 (17) | C10B—C11B—C12B | 117.81 (18) |
C10A—C11A—H11A | 120.9 | C10B—C11B—H11B | 121.1 |
C12A—C11A—H11A | 120.9 | C12B—C11B—H11B | 121.1 |
C11A—C12A—C7A | 120.67 (17) | C7B—C12B—C11B | 120.90 (18) |
C11A—C12A—H12A | 119.7 | C7B—C12B—H12B | 119.5 |
C7A—C12A—H12A | 119.7 | C11B—C12B—H12B | 119.5 |
C5A—N1A—C2A—C3A | 1.14 (19) | C5B—N1B—C2B—C3B | 0.42 (19) |
C5A—N1A—C2A—C6A | −177.51 (15) | C5B—N1B—C2B—C6B | 176.67 (15) |
N1A—C2A—C3A—C4A | −0.6 (2) | N1B—C2B—C3B—C4B | −0.15 (19) |
C6A—C2A—C3A—C4A | 177.92 (17) | C6B—C2B—C3B—C4B | −176.14 (17) |
C2A—C3A—C4A—C5A | −0.1 (2) | C2B—C3B—C4B—C5B | −0.2 (2) |
C2A—N1A—C5A—C4A | −1.24 (19) | C2B—N1B—C5B—C4B | −0.5 (2) |
C3A—C4A—C5A—N1A | 0.8 (2) | C3B—C4B—C5B—N1B | 0.4 (2) |
C7A—N2A—C6A—C2A | 178.13 (14) | C7B—N2B—C6B—C2B | −178.99 (15) |
N1A—C2A—C6A—N2A | −2.6 (3) | N1B—C2B—C6B—N2B | −2.4 (3) |
C3A—C2A—C6A—N2A | 179.06 (17) | C3B—C2B—C6B—N2B | 173.03 (17) |
C6A—N2A—C7A—C12A | 135.80 (16) | C6B—N2B—C7B—C8B | −42.2 (2) |
C6A—N2A—C7A—C8A | −47.6 (2) | C6B—N2B—C7B—C12B | 140.11 (17) |
C12A—C7A—C8A—C9A | −0.7 (2) | C12B—C7B—C8B—C9B | −3.3 (3) |
N2A—C7A—C8A—C9A | −177.25 (15) | N2B—C7B—C8B—C9B | 179.08 (16) |
C7A—C8A—C9A—C10A | −0.6 (3) | C7B—C8B—C9B—C10B | 1.8 (3) |
C8A—C9A—C10A—C11A | 1.0 (3) | C8B—C9B—C10B—C11B | 0.6 (3) |
C8A—C9A—C10A—F1A | −179.54 (15) | C8B—C9B—C10B—F1B | −179.74 (16) |
C9A—C10A—C11A—C12A | 0.0 (3) | C9B—C10B—C11B—C12B | −1.4 (3) |
F1A—C10A—C11A—C12A | −179.47 (15) | F1B—C10B—C11B—C12B | 178.98 (15) |
C10A—C11A—C12A—C7A | −1.4 (3) | C8B—C7B—C12B—C11B | 2.5 (3) |
C8A—C7A—C12A—C11A | 1.8 (2) | N2B—C7B—C12B—C11B | −179.73 (16) |
N2A—C7A—C12A—C11A | 178.46 (15) | C10B—C11B—C12B—C7B | −0.2 (3) |
C12H9N3 | F(000) = 816 |
Mr = 195.22 | Dx = 1.251 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2895 reflections |
a = 12.5935 (13) Å | θ = 2.4–21.5° |
b = 10.1843 (11) Å | µ = 0.08 mm−1 |
c = 16.901 (2) Å | T = 150 K |
β = 107.035 (5)° | Block, yellow |
V = 2072.6 (4) Å3 | 0.30 × 0.22 × 0.20 mm |
Z = 8 |
Bruker APEXII CCD diffractometer | 3944 independent reflections |
Radiation source: fine-focus sealed tube | 2443 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.050 |
φ and ω scans | θmax = 25.8°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −14→15 |
Tmin = 0.977, Tmax = 0.985 | k = −12→12 |
18378 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.096 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0377P)2 + 0.1668P] where P = (Fo2 + 2Fc2)/3 |
3944 reflections | (Δ/σ)max < 0.001 |
279 parameters | Δρmax = 0.21 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
C12H9N3 | V = 2072.6 (4) Å3 |
Mr = 195.22 | Z = 8 |
Monoclinic, P21/n | Mo Kα radiation |
a = 12.5935 (13) Å | µ = 0.08 mm−1 |
b = 10.1843 (11) Å | T = 150 K |
c = 16.901 (2) Å | 0.30 × 0.22 × 0.20 mm |
β = 107.035 (5)° |
Bruker APEXII CCD diffractometer | 3944 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2443 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 0.985 | Rint = 0.050 |
18378 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.096 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | Δρmax = 0.21 e Å−3 |
3944 reflections | Δρmin = −0.17 e Å−3 |
279 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1A | 0.69392 (11) | 0.09386 (14) | 0.23656 (9) | 0.0327 (4) | |
H1A | 0.6968 (14) | 0.1219 (17) | 0.1884 (11) | 0.048 (6)* | |
N2A | 0.51151 (10) | 0.27292 (13) | 0.17568 (8) | 0.0326 (3) | |
N3A | 0.05696 (14) | 0.65427 (16) | 0.02187 (11) | 0.0597 (5) | |
C2A | 0.61564 (13) | 0.12078 (15) | 0.27548 (10) | 0.0320 (4) | |
C3A | 0.64183 (14) | 0.04829 (17) | 0.34774 (10) | 0.0421 (5) | |
H3A | 0.6021 | 0.0478 | 0.3876 | 0.051* | |
C4A | 0.73739 (14) | −0.02412 (17) | 0.35139 (11) | 0.0418 (5) | |
H4A | 0.7747 | −0.0828 | 0.3942 | 0.050* | |
C5A | 0.76720 (13) | 0.00524 (16) | 0.28188 (10) | 0.0363 (4) | |
H5A | 0.8289 | −0.0305 | 0.2677 | 0.044* | |
C6A | 0.52466 (13) | 0.20710 (15) | 0.24244 (10) | 0.0333 (4) | |
H6A | 0.4708 | 0.2164 | 0.2714 | 0.040* | |
C7A | 0.41444 (13) | 0.34996 (16) | 0.14529 (9) | 0.0323 (4) | |
C8A | 0.42516 (14) | 0.47557 (17) | 0.11705 (10) | 0.0410 (5) | |
H8A | 0.4966 | 0.5081 | 0.1191 | 0.049* | |
C9A | 0.33319 (14) | 0.55353 (17) | 0.08605 (10) | 0.0425 (5) | |
H9A | 0.3416 | 0.6409 | 0.0690 | 0.051* | |
C10A | 0.22810 (13) | 0.50460 (16) | 0.07963 (10) | 0.0354 (4) | |
C11A | 0.21600 (14) | 0.37768 (17) | 0.10469 (10) | 0.0407 (4) | |
H11A | 0.1440 | 0.3434 | 0.0992 | 0.049* | |
C12A | 0.30861 (13) | 0.30094 (16) | 0.13761 (11) | 0.0397 (4) | |
H12A | 0.3002 | 0.2140 | 0.1552 | 0.048* | |
C13A | 0.13273 (16) | 0.58670 (17) | 0.04734 (11) | 0.0437 (5) | |
N1B | 0.50641 (12) | 0.20324 (14) | 0.00486 (10) | 0.0375 (4) | |
H1B | 0.5280 (15) | 0.2223 (19) | 0.0577 (12) | 0.060 (6)* | |
N2B | 0.73573 (11) | 0.12417 (13) | 0.07296 (8) | 0.0362 (4) | |
N3B | 1.28103 (15) | −0.03953 (19) | 0.20428 (11) | 0.0708 (6) | |
C2B | 0.56654 (14) | 0.13695 (16) | −0.03764 (10) | 0.0358 (4) | |
C3B | 0.50074 (16) | 0.12842 (17) | −0.11927 (11) | 0.0460 (5) | |
H3B | 0.5208 | 0.0876 | −0.1634 | 0.055* | |
C4B | 0.40028 (16) | 0.19010 (17) | −0.12506 (11) | 0.0476 (5) | |
H4B | 0.3393 | 0.1992 | −0.1736 | 0.057* | |
C5B | 0.40546 (14) | 0.23520 (17) | −0.04792 (11) | 0.0432 (5) | |
H5B | 0.3482 | 0.2812 | −0.0335 | 0.052* | |
C6B | 0.67873 (14) | 0.09939 (15) | −0.00235 (10) | 0.0377 (4) | |
H6B | 0.7143 | 0.0530 | −0.0363 | 0.045* | |
C7B | 0.84833 (14) | 0.08481 (16) | 0.09966 (10) | 0.0360 (4) | |
C8B | 0.92296 (14) | 0.16471 (17) | 0.15650 (10) | 0.0404 (4) | |
H8B | 0.8968 | 0.2419 | 0.1763 | 0.048* | |
C9B | 1.03396 (14) | 0.13356 (18) | 0.18437 (11) | 0.0434 (5) | |
H9B | 1.0843 | 0.1894 | 0.2225 | 0.052* | |
C10B | 1.07190 (14) | 0.01960 (18) | 0.15624 (11) | 0.0433 (5) | |
C11B | 0.99796 (17) | −0.06265 (18) | 0.10161 (12) | 0.0502 (5) | |
H11B | 1.0240 | −0.1411 | 0.0832 | 0.060* | |
C12B | 0.88651 (15) | −0.03099 (17) | 0.07388 (11) | 0.0436 (5) | |
H12B | 0.8358 | −0.0884 | 0.0371 | 0.052* | |
C13B | 1.18810 (18) | −0.0132 (2) | 0.18392 (12) | 0.0541 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1A | 0.0314 (8) | 0.0369 (9) | 0.0268 (8) | −0.0011 (7) | 0.0038 (7) | 0.0003 (7) |
N2A | 0.0301 (8) | 0.0340 (8) | 0.0316 (8) | −0.0010 (6) | 0.0058 (6) | 0.0017 (7) |
N3A | 0.0586 (11) | 0.0425 (9) | 0.0713 (12) | 0.0141 (9) | 0.0085 (9) | −0.0037 (9) |
C2A | 0.0321 (9) | 0.0330 (10) | 0.0290 (9) | −0.0011 (8) | 0.0060 (8) | 0.0002 (8) |
C3A | 0.0449 (11) | 0.0473 (11) | 0.0335 (10) | −0.0007 (9) | 0.0103 (8) | 0.0060 (9) |
C4A | 0.0433 (11) | 0.0390 (11) | 0.0362 (11) | 0.0007 (9) | 0.0008 (8) | 0.0097 (9) |
C5A | 0.0295 (9) | 0.0359 (10) | 0.0363 (10) | 0.0017 (8) | −0.0015 (8) | −0.0004 (8) |
C6A | 0.0351 (10) | 0.0328 (10) | 0.0317 (10) | −0.0032 (8) | 0.0094 (8) | −0.0031 (8) |
C7A | 0.0351 (10) | 0.0336 (10) | 0.0269 (9) | 0.0001 (8) | 0.0071 (7) | −0.0016 (8) |
C8A | 0.0382 (10) | 0.0384 (11) | 0.0416 (11) | −0.0078 (9) | 0.0039 (8) | 0.0047 (9) |
C9A | 0.0479 (11) | 0.0304 (10) | 0.0421 (11) | −0.0047 (9) | 0.0021 (9) | 0.0041 (9) |
C10A | 0.0410 (10) | 0.0333 (10) | 0.0298 (9) | 0.0038 (8) | 0.0072 (8) | −0.0029 (8) |
C11A | 0.0345 (10) | 0.0432 (11) | 0.0451 (11) | 0.0032 (8) | 0.0126 (8) | 0.0044 (9) |
C12A | 0.0389 (10) | 0.0329 (10) | 0.0490 (11) | −0.0001 (8) | 0.0154 (8) | 0.0075 (9) |
C13A | 0.0507 (12) | 0.0347 (10) | 0.0434 (11) | 0.0046 (10) | 0.0102 (9) | −0.0051 (9) |
N1B | 0.0424 (9) | 0.0372 (9) | 0.0299 (9) | −0.0034 (7) | 0.0059 (7) | 0.0005 (7) |
N2B | 0.0424 (9) | 0.0335 (8) | 0.0336 (9) | −0.0004 (7) | 0.0125 (7) | 0.0005 (7) |
N3B | 0.0601 (12) | 0.0899 (14) | 0.0715 (13) | 0.0225 (11) | 0.0335 (10) | 0.0246 (11) |
C2B | 0.0487 (11) | 0.0262 (9) | 0.0313 (10) | −0.0051 (8) | 0.0098 (9) | 0.0008 (8) |
C3B | 0.0678 (13) | 0.0345 (10) | 0.0324 (11) | −0.0089 (10) | 0.0097 (9) | −0.0042 (8) |
C4B | 0.0566 (13) | 0.0394 (11) | 0.0354 (11) | −0.0083 (9) | −0.0042 (9) | 0.0013 (9) |
C5B | 0.0423 (11) | 0.0411 (11) | 0.0390 (11) | −0.0036 (9) | 0.0005 (9) | 0.0040 (9) |
C6B | 0.0546 (12) | 0.0257 (9) | 0.0371 (11) | −0.0017 (8) | 0.0199 (9) | 0.0001 (8) |
C7B | 0.0471 (11) | 0.0331 (10) | 0.0333 (10) | 0.0031 (8) | 0.0202 (8) | 0.0054 (8) |
C8B | 0.0479 (11) | 0.0391 (10) | 0.0358 (10) | 0.0047 (9) | 0.0146 (9) | −0.0013 (9) |
C9B | 0.0468 (11) | 0.0468 (11) | 0.0387 (11) | 0.0022 (9) | 0.0159 (9) | 0.0047 (9) |
C10B | 0.0475 (11) | 0.0481 (12) | 0.0416 (11) | 0.0123 (10) | 0.0247 (9) | 0.0159 (10) |
C11B | 0.0701 (14) | 0.0365 (11) | 0.0528 (12) | 0.0133 (10) | 0.0319 (11) | 0.0063 (10) |
C12B | 0.0557 (12) | 0.0352 (11) | 0.0431 (11) | 0.0040 (9) | 0.0194 (9) | 0.0017 (9) |
C13B | 0.0612 (14) | 0.0596 (13) | 0.0510 (13) | 0.0129 (11) | 0.0312 (11) | 0.0175 (10) |
N1A—C5A | 1.356 (2) | N1B—C5B | 1.362 (2) |
N1A—C2A | 1.364 (2) | N1B—C2B | 1.365 (2) |
N1A—H1A | 0.874 (18) | N1B—H1B | 0.875 (18) |
N2A—C6A | 1.2809 (19) | N2B—C6B | 1.290 (2) |
N2A—C7A | 1.416 (2) | N2B—C7B | 1.414 (2) |
N3A—C13A | 1.153 (2) | N3B—C13B | 1.151 (2) |
C2A—C3A | 1.382 (2) | C2B—C3B | 1.388 (2) |
C2A—C6A | 1.422 (2) | C2B—C6B | 1.416 (2) |
C3A—C4A | 1.397 (2) | C3B—C4B | 1.390 (3) |
C3A—H3A | 0.9500 | C3B—H3B | 0.9500 |
C4A—C5A | 1.367 (2) | C4B—C5B | 1.366 (2) |
C4A—H4A | 0.9500 | C4B—H4B | 0.9500 |
C5A—H5A | 0.9500 | C5B—H5B | 0.9500 |
C6A—H6A | 0.9500 | C6B—H6B | 0.9500 |
C7A—C8A | 1.386 (2) | C7B—C12B | 1.391 (2) |
C7A—C12A | 1.393 (2) | C7B—C8B | 1.393 (2) |
C8A—C9A | 1.375 (2) | C8B—C9B | 1.375 (2) |
C8A—H8A | 0.9500 | C8B—H8B | 0.9500 |
C9A—C10A | 1.388 (2) | C9B—C10B | 1.391 (2) |
C9A—H9A | 0.9500 | C9B—H9B | 0.9500 |
C10A—C11A | 1.383 (2) | C10B—C11B | 1.385 (3) |
C10A—C13A | 1.434 (2) | C10B—C13B | 1.439 (3) |
C11A—C12A | 1.379 (2) | C11B—C12B | 1.381 (2) |
C11A—H11A | 0.9500 | C11B—H11B | 0.9500 |
C12A—H12A | 0.9500 | C12B—H12B | 0.9500 |
C5A—N1A—C2A | 109.27 (15) | C5B—N1B—C2B | 109.20 (15) |
C5A—N1A—H1A | 122.4 (12) | C5B—N1B—H1B | 124.5 (12) |
C2A—N1A—H1A | 128.2 (12) | C2B—N1B—H1B | 126.3 (12) |
C6A—N2A—C7A | 118.97 (14) | C6B—N2B—C7B | 118.39 (15) |
N1A—C2A—C3A | 107.45 (14) | N1B—C2B—C3B | 106.99 (16) |
N1A—C2A—C6A | 123.23 (15) | N1B—C2B—C6B | 123.42 (15) |
C3A—C2A—C6A | 129.31 (16) | C3B—C2B—C6B | 129.28 (17) |
C2A—C3A—C4A | 107.48 (15) | C2B—C3B—C4B | 107.91 (17) |
C2A—C3A—H3A | 126.3 | C2B—C3B—H3B | 126.0 |
C4A—C3A—H3A | 126.3 | C4B—C3B—H3B | 126.0 |
C5A—C4A—C3A | 107.24 (15) | C5B—C4B—C3B | 107.27 (16) |
C5A—C4A—H4A | 126.4 | C5B—C4B—H4B | 126.4 |
C3A—C4A—H4A | 126.4 | C3B—C4B—H4B | 126.4 |
N1A—C5A—C4A | 108.55 (16) | N1B—C5B—C4B | 108.63 (17) |
N1A—C5A—H5A | 125.7 | N1B—C5B—H5B | 125.7 |
C4A—C5A—H5A | 125.7 | C4B—C5B—H5B | 125.7 |
N2A—C6A—C2A | 123.42 (16) | N2B—C6B—C2B | 124.13 (16) |
N2A—C6A—H6A | 118.3 | N2B—C6B—H6B | 117.9 |
C2A—C6A—H6A | 118.3 | C2B—C6B—H6B | 117.9 |
C8A—C7A—C12A | 119.06 (15) | C12B—C7B—C8B | 119.09 (16) |
C8A—C7A—N2A | 118.39 (14) | C12B—C7B—N2B | 123.13 (16) |
C12A—C7A—N2A | 122.40 (15) | C8B—C7B—N2B | 117.74 (15) |
C9A—C8A—C7A | 120.54 (16) | C9B—C8B—C7B | 120.96 (16) |
C9A—C8A—H8A | 119.7 | C9B—C8B—H8B | 119.5 |
C7A—C8A—H8A | 119.7 | C7B—C8B—H8B | 119.5 |
C8A—C9A—C10A | 119.99 (16) | C8B—C9B—C10B | 119.47 (17) |
C8A—C9A—H9A | 120.0 | C8B—C9B—H9B | 120.3 |
C10A—C9A—H9A | 120.0 | C10B—C9B—H9B | 120.3 |
C11A—C10A—C9A | 119.99 (15) | C11B—C10B—C9B | 120.10 (17) |
C11A—C10A—C13A | 120.44 (16) | C11B—C10B—C13B | 119.83 (18) |
C9A—C10A—C13A | 119.57 (16) | C9B—C10B—C13B | 120.07 (18) |
C12A—C11A—C10A | 119.84 (16) | C12B—C11B—C10B | 120.20 (17) |
C12A—C11A—H11A | 120.1 | C12B—C11B—H11B | 119.9 |
C10A—C11A—H11A | 120.1 | C10B—C11B—H11B | 119.9 |
C11A—C12A—C7A | 120.51 (16) | C11B—C12B—C7B | 120.11 (17) |
C11A—C12A—H12A | 119.7 | C11B—C12B—H12B | 119.9 |
C7A—C12A—H12A | 119.7 | C7B—C12B—H12B | 119.9 |
N3A—C13A—C10A | 179.0 (2) | N3B—C13B—C10B | 178.5 (2) |
C5A—N1A—C2A—C3A | 0.88 (18) | C5B—N1B—C2B—C3B | 0.31 (18) |
C5A—N1A—C2A—C6A | −177.91 (14) | C5B—N1B—C2B—C6B | 174.48 (15) |
N1A—C2A—C3A—C4A | −0.49 (18) | N1B—C2B—C3B—C4B | −0.19 (19) |
C6A—C2A—C3A—C4A | 178.22 (16) | C6B—C2B—C3B—C4B | −173.90 (16) |
C2A—C3A—C4A—C5A | −0.08 (19) | C2B—C3B—C4B—C5B | 0.0 (2) |
C2A—N1A—C5A—C4A | −0.95 (18) | C2B—N1B—C5B—C4B | −0.32 (19) |
C3A—C4A—C5A—N1A | 0.62 (19) | C3B—C4B—C5B—N1B | 0.2 (2) |
C7A—N2A—C6A—C2A | 176.13 (14) | C7B—N2B—C6B—C2B | −177.96 (15) |
N1A—C2A—C6A—N2A | −4.1 (2) | N1B—C2B—C6B—N2B | −0.3 (3) |
C3A—C2A—C6A—N2A | 177.38 (16) | C3B—C2B—C6B—N2B | 172.44 (16) |
C6A—N2A—C7A—C8A | 136.23 (16) | C6B—N2B—C7B—C12B | −36.6 (2) |
C6A—N2A—C7A—C12A | −48.3 (2) | C6B—N2B—C7B—C8B | 145.50 (16) |
C12A—C7A—C8A—C9A | 3.6 (3) | C12B—C7B—C8B—C9B | 2.9 (3) |
N2A—C7A—C8A—C9A | 179.22 (15) | N2B—C7B—C8B—C9B | −179.12 (15) |
C7A—C8A—C9A—C10A | −2.7 (3) | C7B—C8B—C9B—C10B | −0.9 (3) |
C8A—C9A—C10A—C11A | 0.2 (3) | C8B—C9B—C10B—C11B | −1.0 (3) |
C8A—C9A—C10A—C13A | 179.91 (17) | C8B—C9B—C10B—C13B | 179.07 (16) |
C9A—C10A—C11A—C12A | 1.3 (3) | C9B—C10B—C11B—C12B | 0.9 (3) |
C13A—C10A—C11A—C12A | −178.33 (16) | C13B—C10B—C11B—C12B | −179.14 (16) |
C10A—C11A—C12A—C7A | −0.5 (3) | C10B—C11B—C12B—C7B | 1.1 (3) |
C8A—C7A—C12A—C11A | −2.0 (2) | C8B—C7B—C12B—C11B | −2.9 (2) |
N2A—C7A—C12A—C11A | −177.44 (15) | N2B—C7B—C12B—C11B | 179.19 (15) |
C11A—C10A—C13A—N3A | 147 (13) | C11B—C10B—C13B—N3B | 57 (9) |
C9A—C10A—C13A—N3A | −32 (13) | C9B—C10B—C13B—N3B | −123 (9) |
Experimental details
(1) | (2) | |
Crystal data | ||
Chemical formula | C11H9FN2 | C12H9N3 |
Mr | 188.20 | 195.22 |
Crystal system, space group | Orthorhombic, Pbca | Monoclinic, P21/n |
Temperature (K) | 150 | 150 |
a, b, c (Å) | 9.5542 (5), 18.7198 (9), 21.1509 (12) | 12.5935 (13), 10.1843 (11), 16.901 (2) |
α, β, γ (°) | 90, 90, 90 | 90, 107.035 (5), 90 |
V (Å3) | 3782.9 (3) | 2072.6 (4) |
Z | 16 | 8 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.09 | 0.08 |
Crystal size (mm) | 0.60 × 0.60 × 0.30 | 0.30 × 0.22 × 0.20 |
Data collection | ||
Diffractometer | Bruker APEXII CCD | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.946, 0.972 | 0.977, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21637, 3605, 2479 | 18378, 3944, 2443 |
Rint | 0.040 | 0.050 |
(sin θ/λ)max (Å−1) | 0.610 | 0.611 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.100, 1.03 | 0.040, 0.096, 1.00 |
No. of reflections | 3605 | 3944 |
No. of parameters | 261 | 279 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.14, −0.26 | 0.21, −0.17 |
Computer programs: APEX2 (Bruker, 1997), SAINT (Bruker, 1997), SIR2004 (Burla et al., 2005), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), Mercury (Macrae et al., 2006), enCIFer (Allen et al., 2004), PLATON (Spek, 2009), publCIF (Westrip, 2010).
(1A) | (1B) | (2A) | (2B) | |
N1—C2 | 1.371 (2) | 1.370 (2) | 1.364 (2) | 1.365 (2) |
C2—C3 | 1.381 (2) | 1.382 (2) | 1.382 (2) | 1.388 (2) |
C3—C4 | 1.395 (3) | 1.393 (3) | 1.397 (2) | 1.390 (3) |
C4—C5 | 1.363 (3) | 1.365 (2) | 1.367 (2) | 1.366 (2) |
N1—C5 | 1.357 (2) | 1.356 (2) | 1.356 (2) | 1.362 (2) |
C2—C6 | 1.423 (2) | 1.426 (2) | 1.422 (2) | 1.416 (2) |
N2—C6 | 1.284 (2) | 1.281 (2) | 1.2809 (19) | 1.290 (2) |
N2—C7 | 1.418 (2) | 1.422 (2) | 1.416 (2) | 1.414 (2) |
C5—N1—C2 | 108.94 (15) | 108.98 (15) | 109.27 (15) | 109.20 (15) |
N1—C2—C3 | 107.28 (15) | 107.20 (16) | 107.45 (14) | 106.99 (16) |
C2—C3—C4 | 107.63 (16) | 107.80 (16) | 107.48 (15) | 107.91 (17) |
C3—C4—C5 | 107.37 (15) | 107.19 (16) | 107.24 (15) | 107.27 (16) |
C4—C5—N1 | 108.77 (16) | 108.82 (17) | 108.55 (16) | 108.63 (17) |
N1—C2—C6 | 123.21 (15) | 123.74 (15) | 123.23 (15) | 123.42 (15) |
C2—C6—N2 | 123.62 (16) | 124.17 (16) | 123.42 (16) | 124.13 (16) |
Compound | D—H···A | D—H | H···A | D···A | D—H···A | |
(1) | N1A—H1A···N2B | 0.908 (19) | 2.131 (19) | 2.990 (2) | 157.4 (17) | |
(1) | N1B—H1B···N2A | 0.925 (19) | 2.108 (19) | 2.9896 (19) | 158.8 (17) | |
(1) | C3B—H3B···F1Bi | 0.95 | 2.59 | 3.521 (2) | 168 | |
(2) | N1A—H1A···N2B | 0.873 (18) | 2.147 (18) | 2.978 (2) | 159.0 (16) | |
(2) | N1B—H1B···N2A | 0.88 (2) | 2.128 (19) | 2.955 (2) | 157.4 (18) | |
(2) | C11B—H11B···N3Aii | 0.95 | 2.42 | 3.357 (3) | 170 |
Symmetry codes: (i) 1 - x, -1/2 + y, 3/2 - z; (ii) x+1, y-1, z. |
Pyrrole and its substituted derivatives are well known five-membered heterocyclic compounds, which are involved in a wide range of applications, in areas such as natural products, bioactive molecules, pharmaceuticals, anion-binding systems etc. (Rao & Jothilingam, 2001; Braun et al., 2001; Hewton et al., 2002; Sessler et al., 2005). Moreover, 2-(N-aryl or N-alkyl)iminopyrroles, (I) (Fig. 1), are usually employed as ligand precursors in the preparation of coordination compounds, generally after deprotonation of the pyrrole NH (Mashima & Tsurugi, 2005). The synthethic strategy for the preparation of these iminopyrrole derivatives is very straightforward, consisting of a Vilsmeier–Haack acylation (Garrido et al., 1984), followed by a condensation reaction with a suitable aliphatic or aromatic amine. The resulting complexes are mostly used as precatalysts in polymerization reactions (Mashima & Tsurugi, 2005; Matsugi & Fujita, 2008), but they can also have applications, for example, in luminescence (Wu et al., 2003, 2004).
Recently, we reported the synthesis of new Ni (Bellabarba et al., 2003), Co (Carabineiro et al., 2007, 2008), Na (Gomes et al., 2010) and Zn (Gomes et al., 2009) complexes containing 2-(N-aryl)iminopyrrolyl ligands, where the Ni derivatives were active in the oligomerization of ethylene and the Zn ones showed luminescent properties. In these publications, we also reported the molecular structure of some ligand precursors, namely 2-[N-(mesitylimino)ethyl]pyrrole, 2-[N-(2,6-diisopropylphenylimino)ethyl]pyrrole, two polymorphs of 2-[N-(phenylimino)methyl]pyrrole and 2-[N-(2,6-diisopropylphenylimino)methyl]pyrrole, which can be found in the Cambridge Structural Database (CSD, Version 5.32; Allen, 2002) with refcodes UMUKUI (Bellabarba et al., 2003), LILYUB (Carabineiro et al., 2007), CUKHUM (Gomes et al., 2010), CUKHUM01 (Gomes et al., 2010) and CUKJEY (Gomes et al., 2010), respectively (Fig. 1).
In the present work, we report the crystal structures of 2-[N-(4-fluorophenylimino)methyl]pyrrole, (1), and 2-[N-(4-cyanophenylimino)methyl]pyrrole, (2), in which the para positions of the phenyl rings are substituted by the electron-withdrawing groups F and C≡N (nitrile). The corresponding molecular structures are depicted in Figs. 2 and 3, respectively. In both compounds the asymmetric unit contains two independent molecules, where the pyrrole moieties show planar backbones with similar features. A brief analysis of the bond distances and angles in these derivatives (Table 1) reveals that the longest bond length in the pyrrole ring is C3—C4, with values ranging from 1.390 (3) to 1.397 (2) Å, and that the shortest one is N1—C5. The imine distance varies between 1.2809 (19) and 1.290 (2) Å (Table 1). The torsion angles N2—C6—C2—N1 of -2.6 (3) and -2.4 (3)° [molecules A and B of (1)] and -4.1 (2) and -0.3 (3)° [molecules A and B of (2)] show that the pyrrole ring and the formimino group are nearly coplanar. The C2—C6 distances in the range 1.416 (2)–1.426 (2) Å are slightly shorter than the normal values for typical C—C single bonds, indicating an extension of the pyrrole ring π-electron delocalization towards the formimino substituent. For both compounds (1) and (2), the phenyl substituent of the iminic fragment lies around 45° relative to the pyrrole ring [dihedral angles of 49.08 (9), 45.33 (10), 52.05 (9) and 39.10 (10)° for molecules A and B of (1) and (2), respectively]. In fact, this is also verified [true?] for CUKHUM [46.97 (7) and 45.31 (8)°] and CUKHUM01 [41.96 (12), 8.93 (12), 47.96 (13) and 41.28 (12)°] that do not present any substituents in the phenyl ring, but it differs [is not the case for] from UMUKUI [85.66 (8)°], LILYUB [86.54 (9) and 83.48 (9)°] and CUKJEY [83.84 (10) and 86.17 (9)°], in which the phenyl rings are rotated about the Nimine—Cipso-phenyl bond, being nearly perpendicular to the formiminopyrrole plane defined by atoms N2—C6—C2—N1, due to the high steric hindrance exerted by the alkyl 2,6-substituting groups (Bellabarba et al., 2003; Carabineiro et al., 2007; Gomes et al., 2010). The value of 8.93 (12)° found in one of the four molecules of polymorph CUKHUM01, which is substantially different from all the others, making the phenyl ring almost coplanar with the iminopyrrole fragment, is due to the supramolecular arrangement.
It is known from the literature (Bellabarba et al., 2003; Munro et al., 2006; Carabineiro et al., 2007; Gomes et al., 2010) that these types of organic derivatives assemble as formiminopyrrole dimers through the formation of two complementary hydrogen bonds between a pyrrole NH and the imine nitrogen belonging to the other molecule of the pair. In agreement with this, both compounds (1) and (2) show dimerization of the iminopyrrole molecules through an R22(10) motif as can be seen in Figs. 4 and 5. However, in contrast to what is observed in the more hindered derivatives UMUKUI, LILYUB or CUKJEY, in which the iminopyrrole molecules of the dimer are coplanar, in (1) and (2), and also in CUKHUM, both molecules composing each dimer are not coplanar, the wings of the pyrrole moieties making an angle of 150.55 (10), 138.77 (10) and 151.94 (8)°, in the cases of (1), (2) and CUKHUM, respectively.
In compound (1), the most important observed intermolecular interactions are the two complementary hydrogen bonds N1A—H1A···N2B and N1B—H1B···N2A (Table 2). However, a C—H···F short contact is found with H···F distances and C—H···F angles within the limits reported in the literature for this type of contact (Shimoni & Glusker, 1994; Howard et al., 1996; Dunitz & Taylor, 1997). In fact, these interactions, always involving molecule B, occur between the fluorine atom and the pyrrole NH at position 3 of the neighbouring dimer, forming one-dimensional chains in the b direction (Fig. 4). Conversely, in derivative (2), in addition to the two hydrogen bonds N1A—H1A···N2B and N1B—H1B···N2A, one can also notice the existence of a weak intermolecular hydrogen bond of the type C—H···N, forming chains in the (110) direction, in which a nitrile group interacts weakly with an aromatic meta-hydrogen atom of the neighbouring dimer (Fig. 5), the latter having a more electropositive character than the corresponding hydrogen of derivative (1), due to the proximity of the more powerful electron-withdrawing nitrile group. This is in agreement with the 1H and 13C NMR data for the corresponding meta-proton and meta-carbon nuclei that are clearly more deshielded in compound (2) than in (1) [δ 1H 7.67–7.63 versus 7.19–7.13 and δ 13C 133.4 versus 116.8 p.p.m. for (2) and (1), respectively] (Figs. 4 and 5).
Moreover, comparing these two crystal structures with VIYWUW (Heinze et al., 2008), an iminopyrrole derivative containing a hydroxy substituent in the para position of the phenyl ring (see Fig. 1), it is possible to notice that the phenyl substituent of the iminic fragment also lies around 45° relative to the pyrrole ring [dihedral angle of 49.59 (5)°], and that all the distances within the molecule are in agreement with the ones observed for the derivatives discussed above. On the other hand, the formation of dimers through the establishment of complementary N—H···N hydrogen bonds is disabled in this compound, due to the presence of the para-hydroxy substituent, which is involved in three different interactions: O—H···N, N—H···O and C—H···O. Additionally, similarly to derivative (2), this compound also forms an infinite one-dimensional chain.