In the structure of the title compound, [Zn(C5H3N2O2)2(H2O)2], the ZnII ion is located on a centre of symmetry. The coordination around the ZnII atom is slightly distorted octahedral, with two equatorial pyridazine-3-carboxylate ligands in a trans arrangement. A pyridazine-ring N atom [Zn—N = 2.0742 (15) Å] and one carboxylate O atom [Zn1—O2 = 2.0744 (14) Å] from each ligand coordinate to the metal. Two water O atoms [Zn—O = 2.1934 (17) Å] are coordinated in axial positions. The coordinated water molecules act as hydrogen-bond donors to the unbonded carboxylate O atoms in adjacent monomers, forming a three-dimensional network.
Supporting information
CCDC reference: 252788
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.041
- wR factor = 0.113
- Data-to-parameter ratio = 13.7
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT029_ALERT_3_B _diffrn_measured_fraction_theta_full Low ....... 0.95
Alert level C
PLAT164_ALERT_4_C Nr. of Refined C-H H-Atoms in Heavy-At Struct... 3
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.21
0 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
2 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: KM-4 Software (Kuma, 1996); cell refinement: KM-4 Software; data reduction: DATAPROC (Kuma, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP (Siemens, 1992); software used to prepare material for publication: SHELXL97.
Diaqua-
trans-bis(pyridazine-3-carboxylato-
κ2O,
N)zinc(II)
top
Crystal data top
[Zn(C5H3N2O2)2(H2O)2] | F(000) = 352 |
Mr = 347.61 | Dx = 1.965 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 5.227 (1) Å | θ = 6–13° |
b = 11.709 (2) Å | µ = 2.13 mm−1 |
c = 9.799 (2) Å | T = 293 K |
β = 101.63 (3)° | Rectangular plate, colourless |
V = 587.4 (2) Å3 | 0.37 × 0.21 × 0.18 mm |
Z = 2 | |
Data collection top
Kuma KM-4 four-circle diffractometer | 1529 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.047 |
Graphite monochromator | θmax = 30.1°, θmin = 2.7° |
ω/2θ scans | h = −7→0 |
Absorption correction: analytical (CrysAlis RED v. 169, Oxford Diffraction, 2000 | k = 0→16 |
Tmin = 0.245, Tmax = 0.357 | l = −13→13 |
1750 measured reflections | 3 standard reflections every 200 reflections |
1601 independent reflections | intensity decay: 3.0% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.114 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0855P)2 + 0.2546P] where P = (Fo2 + 2Fc2)/3 |
1601 reflections | (Δ/σ)max < 0.001 |
117 parameters | Δρmax = 1.19 e Å−3 |
0 restraints | Δρmin = −1.88 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Zn1 | 0.5000 | 0.5000 | 0.5000 | 0.02186 (15) | |
O1 | 0.2136 (3) | 0.72033 (14) | 0.75307 (19) | 0.0349 (4) | |
O2 | 0.2934 (3) | 0.56119 (12) | 0.64458 (16) | 0.0256 (3) | |
O3 | 0.1737 (3) | 0.54229 (15) | 0.32897 (17) | 0.0287 (3) | |
N1 | 0.3818 (3) | 0.33056 (13) | 0.48610 (16) | 0.0199 (3) | |
N2 | 0.2183 (3) | 0.28544 (14) | 0.55897 (18) | 0.0243 (3) | |
C3 | 0.1676 (4) | 0.17482 (18) | 0.5435 (2) | 0.0280 (4) | |
C4 | 0.2724 (4) | 0.10534 (17) | 0.4538 (2) | 0.0288 (4) | |
C5 | 0.4409 (4) | 0.15343 (17) | 0.3801 (2) | 0.0265 (4) | |
C6 | 0.4924 (3) | 0.26915 (15) | 0.40012 (17) | 0.0198 (3) | |
C7 | 0.3221 (3) | 0.66637 (16) | 0.67342 (18) | 0.0219 (3) | |
H3 | 0.045 (6) | 0.145 (3) | 0.601 (3) | 0.039 (8)* | |
H4 | 0.241 (6) | 0.025 (3) | 0.443 (4) | 0.029 (7)* | |
H5 | 0.515 (7) | 0.108 (3) | 0.313 (4) | 0.055 (10)* | |
H31 | 0.031 (8) | 0.508 (2) | 0.337 (4) | 0.030 (9)* | |
H32 | 0.148 (12) | 0.605 (4) | 0.321 (6) | 0.086 (17)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Zn1 | 0.0259 (2) | 0.0167 (2) | 0.0278 (2) | −0.00176 (8) | 0.01676 (14) | −0.00194 (9) |
O1 | 0.0391 (8) | 0.0347 (9) | 0.0391 (8) | −0.0029 (6) | 0.0276 (7) | −0.0105 (6) |
O2 | 0.0287 (6) | 0.0219 (6) | 0.0322 (7) | −0.0017 (5) | 0.0203 (5) | −0.0008 (5) |
O3 | 0.0248 (7) | 0.0282 (8) | 0.0354 (8) | 0.0004 (5) | 0.0115 (6) | 0.0045 (6) |
N1 | 0.0218 (6) | 0.0189 (7) | 0.0225 (7) | −0.0008 (5) | 0.0125 (5) | 0.0001 (5) |
N2 | 0.0258 (7) | 0.0247 (8) | 0.0269 (7) | −0.0028 (6) | 0.0162 (6) | 0.0004 (6) |
C3 | 0.0299 (9) | 0.0261 (9) | 0.0318 (9) | −0.0047 (7) | 0.0153 (7) | 0.0018 (7) |
C4 | 0.0344 (9) | 0.0195 (8) | 0.0351 (10) | −0.0048 (7) | 0.0130 (8) | −0.0014 (7) |
C5 | 0.0334 (9) | 0.0207 (9) | 0.0285 (9) | −0.0008 (7) | 0.0138 (7) | −0.0045 (7) |
C6 | 0.0207 (7) | 0.0202 (8) | 0.0206 (8) | −0.0005 (6) | 0.0095 (6) | −0.0008 (6) |
C7 | 0.0215 (7) | 0.0257 (9) | 0.0212 (7) | 0.0002 (6) | 0.0108 (6) | −0.0007 (6) |
Geometric parameters (Å, º) top
Zn1—N1i | 2.0742 (15) | N1—N2 | 1.329 (2) |
Zn1—N1 | 2.0742 (15) | O3—H31 | 0.86 (4) |
Zn1—O2 | 2.0744 (14) | O3—H32 | 0.75 (5) |
Zn1—O2i | 2.0744 (14) | N2—C3 | 1.325 (3) |
Zn1—O3i | 2.1934 (17) | C7—C6i | 1.520 (2) |
Zn1—O3 | 2.1934 (17) | C4—C5 | 1.368 (3) |
O2—C7 | 1.266 (2) | C4—C3 | 1.389 (3) |
O1—C7 | 1.228 (2) | C4—H4 | 0.95 (4) |
C6—N1 | 1.326 (2) | C5—H5 | 0.98 (4) |
C6—C5 | 1.388 (3) | C3—H3 | 1.00 (3) |
C6—C7i | 1.520 (2) | | |
| | | |
N1i—Zn1—N1 | 180.0 | C6—N1—N2 | 122.41 (15) |
N1i—Zn1—O2 | 79.28 (6) | C6—N1—Zn1 | 113.47 (11) |
N1—Zn1—O2 | 100.72 (6) | N2—N1—Zn1 | 124.09 (12) |
N1i—Zn1—O2i | 100.72 (6) | Zn1—O3—H31 | 112 (3) |
N1—Zn1—O2i | 79.28 (6) | Zn1—O3—H32 | 114 (4) |
O2—Zn1—O2i | 180.0 | H31—O3—H32 | 109 (5) |
N1i—Zn1—O3i | 89.44 (6) | C3—N2—N1 | 117.58 (16) |
N1—Zn1—O3i | 90.56 (6) | O1—C7—O2 | 126.39 (18) |
O2—Zn1—O3i | 89.30 (6) | O1—C7—C6i | 117.79 (17) |
O2i—Zn1—O3i | 90.70 (6) | O2—C7—C6i | 115.82 (15) |
N1i—Zn1—O3 | 90.56 (6) | C5—C4—C3 | 118.11 (18) |
N1—Zn1—O3 | 89.44 (6) | C5—C4—H4 | 117 (2) |
O2—Zn1—O3 | 90.70 (6) | C3—C4—H4 | 125 (2) |
O2i—Zn1—O3 | 89.30 (6) | C4—C5—C6 | 117.02 (17) |
O3i—Zn1—O3 | 180.0 | C4—C5—H5 | 121 (2) |
C7—O2—Zn1 | 115.72 (12) | C6—C5—H5 | 122 (2) |
N1—C6—C5 | 121.51 (16) | N2—C3—C4 | 123.35 (18) |
N1—C6—C7i | 115.68 (15) | N2—C3—H3 | 114.3 (19) |
C5—C6—C7i | 122.81 (16) | C4—C3—H3 | 122.3 (19) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H31···O2ii | 0.86 (4) | 1.92 (4) | 2.784 (2) | 178 (4) |
O3—H32···O1iii | 0.75 (3) | 2.20 (5) | 2.896 (2) | 155 (5) |
Symmetry codes: (ii) −x, −y+1, −z+1; (iii) x, −y+3/2, z−1/2. |