Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100012105/qa0382sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270100012105/qa0382Isup2.hkl |
CCDC reference: 152653
2,6-Diaminopyridine (0.01 mol, 1.09 g) and CuBr2 (0.005 mol, 1.12 g) were dissolved in dilute HBr (100 ml, ca 0.1M) and the resultant solution was slowly evaporated at ca 323 K. The compound was obtained as small nearly opaque purple crystals after two days.
H atoms were found on difference Fourier syntheses and positional parameters and isotropic displacement parameters refined. The X—H distances were restrained to a distance of 0.96 (5) Å. The largest residual electron-density peaks all lie within 1.06 Å of Br atoms.
Data collection: SMART (Bruker, 1997); cell refinement: SMART; data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); software used to prepare material for publication: SHELXL97.
(C5H6N3Br2)2[CuBr4] | F(000) = 1692 |
Mr = 919.08 | Dx = 2.741 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 20.612 (10) Å | Cell parameters from 5523 reflections |
b = 10.053 (5) Å | θ = 2.4–24.7° |
c = 13.507 (7) Å | µ = 15.34 mm−1 |
β = 127.264 (7)° | T = 293 K |
V = 2227.3 (19) Å3 | Plates, purple |
Z = 4 | 0.38 × 0.18 × 0.03 mm |
Bruker CCD area-detector diffractometer | 1849 independent reflections |
Radiation source: normal-focus sealed tube | 1274 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.056 |
ϕ and ω scans | θmax = 24.7°, θmin = 2.4° |
Absorption correction: empirical (using intensity measurements) (SADABS; Bruker, 1998) | h = −16→24 |
Tmin = 0.045, Tmax = 0.681 | k = −11→11 |
5523 measured reflections | l = −15→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.129 | All H-atom parameters refined |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0744P)2] where P = (Fo2 + 2Fc2)/3 |
1849 reflections | (Δ/σ)max < 0.001 |
138 parameters | Δρmax = 1.31 e Å−3 |
6 restraints | Δρmin = −0.96 e Å−3 |
(C5H6N3Br2)2[CuBr4] | V = 2227.3 (19) Å3 |
Mr = 919.08 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 20.612 (10) Å | µ = 15.34 mm−1 |
b = 10.053 (5) Å | T = 293 K |
c = 13.507 (7) Å | 0.38 × 0.18 × 0.03 mm |
β = 127.264 (7)° |
Bruker CCD area-detector diffractometer | 1849 independent reflections |
Absorption correction: empirical (using intensity measurements) (SADABS; Bruker, 1998) | 1274 reflections with I > 2σ(I) |
Tmin = 0.045, Tmax = 0.681 | Rint = 0.056 |
5523 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 6 restraints |
wR(F2) = 0.129 | All H-atom parameters refined |
S = 1.02 | Δρmax = 1.31 e Å−3 |
1849 reflections | Δρmin = −0.96 e Å−3 |
138 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu | 0.5000 | −0.32918 (15) | 0.2500 | 0.0435 (4) | |
Br1 | 0.39440 (7) | −0.43115 (10) | 0.24630 (10) | 0.0546 (3) | |
Br2 | 0.57585 (7) | −0.23991 (9) | 0.45615 (9) | 0.0523 (3) | |
N1 | 0.1810 (5) | 0.0220 (8) | 0.0548 (7) | 0.0433 (19) | |
H1 | 0.141 (4) | −0.038 (7) | 0.021 (8) | 0.04 (3)* | |
C2 | 0.2598 (6) | −0.0111 (9) | 0.1253 (8) | 0.040 (2) | |
N2 | 0.2777 (6) | −0.1393 (8) | 0.1300 (9) | 0.054 (2) | |
H2A | 0.329 (3) | −0.161 (8) | 0.165 (7) | 0.02 (2)* | |
H2B | 0.232 (6) | −0.191 (13) | 0.101 (13) | 0.13 (6)* | |
C3 | 0.3147 (6) | 0.0932 (9) | 0.1849 (8) | 0.041 (2) | |
Br3 | 0.42727 (7) | 0.05131 (11) | 0.28619 (10) | 0.0610 (4) | |
C4 | 0.2868 (7) | 0.2212 (9) | 0.1690 (10) | 0.047 (3) | |
H4 | 0.318 (6) | 0.299 (8) | 0.209 (9) | 0.09 (4)* | |
C5 | 0.2059 (7) | 0.2499 (8) | 0.0931 (8) | 0.040 (2) | |
Br5 | 0.16690 (8) | 0.42578 (9) | 0.06204 (10) | 0.0579 (4) | |
C6 | 0.1478 (7) | 0.1468 (9) | 0.0331 (9) | 0.044 (2) | |
N6 | 0.0681 (6) | 0.1620 (9) | −0.0454 (9) | 0.061 (3) | |
H6A | 0.044 (7) | 0.234 (8) | −0.031 (11) | 0.08 (4)* | |
H6B | 0.031 (7) | 0.089 (9) | −0.079 (11) | 0.10 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu | 0.0432 (11) | 0.0436 (9) | 0.0421 (9) | 0.000 | 0.0250 (9) | 0.000 |
Br1 | 0.0594 (8) | 0.0534 (6) | 0.0599 (7) | −0.0096 (5) | 0.0407 (6) | −0.0035 (5) |
Br2 | 0.0581 (7) | 0.0395 (5) | 0.0477 (6) | 0.0029 (5) | 0.0259 (6) | −0.0071 (4) |
N1 | 0.045 (6) | 0.036 (4) | 0.043 (5) | 0.000 (4) | 0.024 (5) | −0.003 (4) |
C2 | 0.052 (7) | 0.036 (5) | 0.033 (5) | 0.004 (5) | 0.028 (5) | −0.001 (4) |
N2 | 0.047 (7) | 0.045 (5) | 0.068 (6) | 0.005 (5) | 0.034 (6) | −0.005 (4) |
C3 | 0.035 (6) | 0.053 (6) | 0.033 (5) | 0.004 (4) | 0.019 (5) | −0.001 (4) |
Br3 | 0.0457 (7) | 0.0738 (8) | 0.0606 (7) | 0.0017 (5) | 0.0307 (6) | −0.0097 (5) |
C4 | 0.070 (8) | 0.036 (5) | 0.048 (6) | −0.006 (5) | 0.043 (6) | −0.007 (4) |
C5 | 0.062 (7) | 0.029 (5) | 0.038 (5) | 0.006 (4) | 0.034 (5) | 0.002 (4) |
Br5 | 0.0830 (9) | 0.0376 (5) | 0.0605 (7) | 0.0093 (5) | 0.0473 (7) | 0.0014 (4) |
C6 | 0.055 (7) | 0.043 (5) | 0.035 (5) | 0.008 (5) | 0.027 (5) | 0.007 (4) |
N6 | 0.064 (8) | 0.045 (5) | 0.061 (6) | 0.011 (5) | 0.031 (6) | 0.001 (4) |
Cu—Br1 | 2.3790 (16) | N2—H2B | 0.93 (5) |
Cu—Br1i | 2.3790 (16) | C3—C4 | 1.373 (13) |
Cu—Br2 | 2.3939 (15) | C3—Br3 | 1.894 (9) |
Cu—Br2i | 2.3939 (15) | C4—C5 | 1.358 (15) |
N1—C2 | 1.335 (12) | C4—H4 | 0.95 (5) |
N1—C6 | 1.374 (12) | C5—C6 | 1.410 (14) |
N1—H1 | 0.90 (5) | C5—Br5 | 1.881 (9) |
C2—N2 | 1.331 (12) | C6—N6 | 1.317 (13) |
C2—C3 | 1.388 (13) | N6—H6A | 0.96 (5) |
N2—H2A | 0.88 (4) | N6—H6B | 0.95 (5) |
Br1—Cu—Br1i | 128.95 (9) | C4—C3—C2 | 120.0 (9) |
Br1—Cu—Br2 | 97.52 (5) | C4—C3—Br3 | 122.4 (8) |
Br1i—Cu—Br2 | 101.08 (5) | C2—C3—Br3 | 117.6 (7) |
Br1—Cu—Br2i | 101.08 (4) | C5—C4—C3 | 121.6 (9) |
Br1i—Cu—Br2i | 97.52 (4) | C5—C4—H4 | 111 (7) |
Br2—Cu—Br2i | 135.97 (9) | C3—C4—H4 | 128 (7) |
C2—N1—C6 | 127.9 (9) | C4—C5—C6 | 120.3 (8) |
C2—N1—H1 | 123 (6) | C4—C5—Br5 | 122.1 (7) |
C6—N1—H1 | 108 (6) | C6—C5—Br5 | 117.6 (8) |
N2—C2—N1 | 117.2 (9) | N6—C6—N1 | 119.7 (9) |
N2—C2—C3 | 126.7 (10) | N6—C6—C5 | 126.0 (9) |
N1—C2—C3 | 116.0 (8) | N1—C6—C5 | 114.1 (9) |
C2—N2—H2A | 118 (5) | C6—N6—H6A | 118 (7) |
C2—N2—H2B | 110 (10) | C6—N6—H6B | 123 (8) |
H2A—N2—H2B | 131 (10) | H6A—N6—H6B | 108 (10) |
C6—N1—C2—N2 | −178.4 (9) | C3—C4—C5—C6 | 3.3 (14) |
C6—N1—C2—C3 | 0.7 (14) | C3—C4—C5—Br5 | −175.8 (7) |
N2—C2—C3—C4 | 178.7 (9) | C2—N1—C6—N6 | 176.1 (10) |
N1—C2—C3—C4 | −0.3 (13) | C2—N1—C6—C5 | 0.8 (13) |
N2—C2—C3—Br3 | −1.1 (13) | C4—C5—C6—N6 | −177.6 (10) |
N1—C2—C3—Br3 | 180.0 (6) | Br5—C5—C6—N6 | 1.5 (13) |
C2—C3—C4—C5 | −1.7 (14) | C4—C5—C6—N1 | −2.7 (12) |
Br3—C3—C4—C5 | 178.1 (7) | Br5—C5—C6—N1 | 176.4 (6) |
Symmetry code: (i) −x+1, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | (C5H6N3Br2)2[CuBr4] |
Mr | 919.08 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 20.612 (10), 10.053 (5), 13.507 (7) |
β (°) | 127.264 (7) |
V (Å3) | 2227.3 (19) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 15.34 |
Crystal size (mm) | 0.38 × 0.18 × 0.03 |
Data collection | |
Diffractometer | Bruker CCD area-detector diffractometer |
Absorption correction | Empirical (using intensity measurements) (SADABS; Bruker, 1998) |
Tmin, Tmax | 0.045, 0.681 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5523, 1849, 1274 |
Rint | 0.056 |
(sin θ/λ)max (Å−1) | 0.588 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.129, 1.02 |
No. of reflections | 1849 |
No. of parameters | 138 |
No. of restraints | 6 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 1.31, −0.96 |
Computer programs: SMART (Bruker, 1997), SMART, SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXL97.
The catalytic halogenation of activated pyridine rings by copper(II) halides is a common phenomenon. The bromination step presubably involves reduction of CuII to CuI, with the subsequent re-oxidation to CuII by atmospheric oxygen. In our attempts to prepare various substituted pyridinium salts of copper(II) halides, we have frequently isolated the corresponding halogenated salts (Willett & West, 1987; Willett, 1988, 2000; Place & Willett, 1987; Willett & Halvorson, 1988). With 2,6-diaminopyridine, we have previously reported the formation and isolation of the corresponding 3,5-dichloro derivative (Willett & West, 1987) as the [CuCl4]2− salt. However, the compound crystallizes in a different space group.
In the title compound, (I), the cation is nearly planar. However, the Br5 atom lies 0.116 Å out of the plane of the pyridine ring. This is probably due to steric repulsion with the adjacent NH2 group. The [CuBr4]2− anion has a slightly compressed tetrahedral geometry with a substantial (but not unusual) distortion from idealized D2 d symmetry (Place & Willett, 1988).