In the mononuclear title compound, [PtCl4(C12H8N2O4)]·H2O, the PtIV atom is six-coordinated in octahedral configuration by two N atoms from the 2,2'-bipyridine-5,5'-dicarboxylic acid ligand and four terminal Cl atoms. In the crystal structure, the molecules are linked together through extensive intermolecular hydrogen bonding, forming a three-dimensional structure.
Supporting information
CCDC reference: 601248
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.006 Å
- R factor = 0.028
- wR factor = 0.070
- Data-to-parameter ratio = 15.2
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT029_ALERT_3_B _diffrn_measured_fraction_theta_full Low ....... 0.95
Alert level C
ABSTM02_ALERT_3_C The ratio of expected to reported Tmax/Tmin(RR) is > 1.10
Tmin and Tmax reported: 0.231 0.656
Tmin and Tmax expected: 0.153 0.631
RR = 1.459
Please check that your absorption correction is appropriate.
PLAT060_ALERT_3_C Ratio Tmax/Tmin (Exp-to-Rep) (too) Large ....... 1.46
PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.96
PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ?
PLAT164_ALERT_4_C Nr. of Refined C-H H-Atoms in Heavy-At Struct... 6
PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.68 Ratio
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C6
0 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
7 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
4 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Bruker, 1998); cell refinement: SMART; data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXL97.
(2,2'-Bipyridine-5,5'-dicarboxylic acid)tetrachloroplatinum(IV) monohydrate
top
Crystal data top
[PtCl4(C12H8N2O4)]·H2O | F(000) = 1128 |
Mr = 599.11 | Dx = 2.417 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5858 reflections |
a = 15.905 (3) Å | θ = 2.7–28.3° |
b = 8.9969 (18) Å | µ = 9.20 mm−1 |
c = 12.512 (3) Å | T = 298 K |
β = 113.12 (3)° | Cube, yellow |
V = 1646.6 (6) Å3 | 0.22 × 0.22 × 0.05 mm |
Z = 4 | |
Data collection top
Siemens SMART CCD diffractometer | 3903 independent reflections |
Radiation source: fine-focus sealed tube | 3318 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.049 |
ω scans | θmax = 28.3°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1997) | h = −20→20 |
Tmin = 0.231, Tmax = 0.656 | k = −12→7 |
10397 measured reflections | l = −16→15 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.070 | All H-atom parameters refined |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0282P)2] where P = (Fo2 + 2Fc2)/3 |
3903 reflections | (Δ/σ)max = 0.002 |
257 parameters | Δρmax = 1.53 e Å−3 |
0 restraints | Δρmin = −1.44 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Pt1 | 0.228299 (11) | 1.130034 (16) | 0.114022 (12) | 0.02309 (7) | |
Cl1 | 0.35974 (9) | 1.15458 (13) | 0.07720 (11) | 0.0383 (3) | |
Cl2 | 0.28462 (9) | 1.28363 (12) | 0.27300 (9) | 0.0382 (3) | |
Cl3 | 0.09638 (9) | 1.09048 (14) | 0.14705 (12) | 0.0411 (3) | |
Cl4 | 0.16589 (9) | 1.33482 (12) | 0.00032 (10) | 0.0367 (3) | |
C1 | 0.3341 (3) | 0.9314 (5) | 0.3188 (4) | 0.0261 (9) | |
C2 | 0.3686 (3) | 0.7975 (5) | 0.3716 (3) | 0.0270 (9) | |
C3 | 0.3487 (3) | 0.6677 (5) | 0.3052 (4) | 0.0315 (10) | |
C4 | 0.2944 (3) | 0.6775 (5) | 0.1875 (4) | 0.0314 (10) | |
C5 | 0.2624 (3) | 0.8140 (5) | 0.1384 (3) | 0.0237 (9) | |
C6 | 0.4238 (3) | 0.7931 (5) | 0.5004 (4) | 0.0328 (10) | |
C7 | 0.2063 (3) | 0.8358 (5) | 0.0146 (3) | 0.0223 (8) | |
C8 | 0.1804 (3) | 0.7229 (5) | −0.0663 (4) | 0.0276 (9) | |
C9 | 0.1306 (3) | 0.7566 (5) | −0.1830 (4) | 0.0273 (9) | |
C10 | 0.1081 (3) | 0.9025 (5) | −0.2153 (3) | 0.0253 (9) | |
C11 | 0.1331 (3) | 1.0142 (5) | −0.1315 (4) | 0.0280 (10) | |
C12 | 0.0585 (3) | 0.9454 (5) | −0.3396 (3) | 0.0274 (9) | |
N1 | 0.2827 (2) | 0.9386 (4) | 0.2050 (3) | 0.0241 (7) | |
N2 | 0.1819 (2) | 0.9802 (4) | −0.0194 (3) | 0.0240 (7) | |
O1 | 0.4350 (3) | 0.8990 (4) | 0.5604 (3) | 0.0628 (13) | |
O2 | 0.4552 (4) | 0.6614 (4) | 0.5340 (3) | 0.0615 (13) | |
O3 | 0.0162 (2) | 1.0667 (3) | −0.3635 (2) | 0.0340 (7) | |
O4 | 0.0627 (3) | 0.8526 (4) | −0.4139 (3) | 0.0405 (9) | |
O5W | 0.5151 (3) | 0.6034 (6) | 0.7510 (3) | 0.0546 (12) | |
H1 | 0.340 (3) | 1.024 (5) | 0.362 (3) | 0.019 (10)* | |
H2 | 0.372 (3) | 0.584 (5) | 0.342 (4) | 0.028 (12)* | |
H3 | 0.278 (3) | 0.597 (5) | 0.145 (4) | 0.028 (13)* | |
H4 | 0.464 (5) | 0.644 (7) | 0.601 (6) | 0.07 (2)* | |
H5 | 0.193 (3) | 0.630 (4) | −0.035 (4) | 0.027 (13)* | |
H6 | 0.112 (4) | 0.673 (6) | −0.238 (4) | 0.042 (14)* | |
H7 | 0.119 (3) | 1.113 (4) | −0.149 (4) | 0.021 (11)* | |
H8 | 0.037 (4) | 0.863 (6) | −0.478 (6) | 0.05 (2)* | |
H9 | 0.511 (5) | 0.537 (8) | 0.784 (6) | 0.08 (3)* | |
H10 | 0.556 (5) | 0.669 (7) | 0.788 (6) | 0.08 (2)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Pt1 | 0.02827 (11) | 0.01843 (10) | 0.02014 (10) | 0.00023 (6) | 0.00689 (7) | −0.00080 (5) |
Cl1 | 0.0363 (7) | 0.0421 (6) | 0.0388 (6) | −0.0034 (5) | 0.0172 (5) | −0.0010 (5) |
Cl2 | 0.0536 (7) | 0.0288 (5) | 0.0284 (5) | −0.0046 (5) | 0.0120 (5) | −0.0092 (4) |
Cl3 | 0.0400 (7) | 0.0347 (6) | 0.0547 (7) | 0.0023 (6) | 0.0252 (6) | 0.0052 (5) |
Cl4 | 0.0479 (7) | 0.0216 (5) | 0.0350 (6) | 0.0058 (5) | 0.0103 (5) | 0.0051 (4) |
C1 | 0.027 (2) | 0.025 (2) | 0.022 (2) | 0.0022 (18) | 0.0057 (17) | −0.0005 (17) |
C2 | 0.028 (2) | 0.031 (2) | 0.020 (2) | 0.0024 (19) | 0.0073 (17) | 0.0023 (17) |
C3 | 0.040 (3) | 0.023 (2) | 0.028 (2) | 0.001 (2) | 0.009 (2) | 0.0020 (18) |
C4 | 0.040 (3) | 0.018 (2) | 0.031 (2) | 0.003 (2) | 0.008 (2) | −0.0003 (18) |
C5 | 0.031 (2) | 0.021 (2) | 0.0191 (19) | −0.0010 (18) | 0.0090 (17) | 0.0007 (15) |
C6 | 0.037 (3) | 0.037 (3) | 0.020 (2) | 0.000 (2) | 0.0061 (19) | 0.0040 (18) |
C7 | 0.025 (2) | 0.0232 (19) | 0.0175 (19) | −0.0022 (17) | 0.0071 (17) | −0.0017 (15) |
C8 | 0.036 (3) | 0.022 (2) | 0.022 (2) | −0.0023 (19) | 0.0086 (18) | −0.0011 (16) |
C9 | 0.031 (2) | 0.030 (2) | 0.022 (2) | −0.0021 (19) | 0.0105 (18) | −0.0040 (17) |
C10 | 0.028 (2) | 0.027 (2) | 0.019 (2) | −0.0030 (19) | 0.0076 (17) | −0.0040 (16) |
C11 | 0.030 (2) | 0.024 (2) | 0.024 (2) | 0.0009 (19) | 0.0046 (18) | 0.0034 (16) |
C12 | 0.024 (2) | 0.030 (2) | 0.024 (2) | −0.0027 (19) | 0.0053 (18) | −0.0027 (17) |
N1 | 0.0316 (19) | 0.0173 (16) | 0.0213 (17) | 0.0031 (15) | 0.0079 (15) | 0.0011 (13) |
N2 | 0.0304 (19) | 0.0215 (17) | 0.0163 (16) | 0.0008 (15) | 0.0050 (14) | −0.0037 (13) |
O1 | 0.095 (4) | 0.047 (2) | 0.0274 (19) | 0.014 (2) | 0.004 (2) | −0.0051 (16) |
O2 | 0.093 (4) | 0.041 (2) | 0.025 (2) | 0.013 (2) | −0.003 (2) | 0.0066 (16) |
O3 | 0.0381 (19) | 0.0345 (17) | 0.0259 (15) | 0.0096 (15) | 0.0087 (14) | 0.0024 (13) |
O4 | 0.044 (2) | 0.050 (2) | 0.0185 (17) | 0.0133 (16) | 0.0026 (16) | −0.0058 (14) |
O5W | 0.059 (3) | 0.060 (3) | 0.030 (2) | −0.020 (2) | 0.002 (2) | 0.0074 (19) |
Geometric parameters (Å, º) top
Pt1—N2 | 2.044 (3) | C6—O2 | 1.290 (6) |
Pt1—N1 | 2.058 (3) | C7—N2 | 1.374 (5) |
Pt1—Cl2 | 2.2955 (11) | C7—C8 | 1.378 (6) |
Pt1—Cl4 | 2.3010 (12) | C8—C9 | 1.394 (6) |
Pt1—Cl3 | 2.3196 (13) | C8—H5 | 0.91 (4) |
Pt1—Cl1 | 2.3212 (14) | C9—C10 | 1.379 (6) |
C1—N1 | 1.337 (5) | C9—H6 | 0.98 (5) |
C1—C2 | 1.380 (6) | C10—C11 | 1.393 (6) |
C1—H1 | 0.98 (4) | C10—C12 | 1.492 (6) |
C2—C3 | 1.396 (6) | C11—N2 | 1.345 (5) |
C2—C6 | 1.503 (5) | C11—H7 | 0.92 (4) |
C3—C4 | 1.387 (6) | C12—O3 | 1.255 (5) |
C3—H2 | 0.88 (5) | C12—O4 | 1.271 (5) |
C4—C5 | 1.378 (6) | O2—H4 | 0.81 (7) |
C4—H3 | 0.87 (5) | O4—H8 | 0.75 (6) |
C5—N1 | 1.357 (5) | O5W—H9 | 0.75 (7) |
C5—C7 | 1.467 (5) | O5W—H10 | 0.87 (7) |
C6—O1 | 1.183 (6) | | |
| | | |
N2—Pt1—N1 | 80.69 (13) | O1—C6—O2 | 126.2 (5) |
N2—Pt1—Cl2 | 175.75 (10) | O1—C6—C2 | 122.6 (5) |
N1—Pt1—Cl2 | 95.07 (10) | O2—C6—C2 | 111.2 (4) |
N2—Pt1—Cl4 | 95.36 (10) | N2—C7—C8 | 120.2 (4) |
N1—Pt1—Cl4 | 175.89 (9) | N2—C7—C5 | 115.7 (4) |
Cl2—Pt1—Cl4 | 88.89 (5) | C8—C7—C5 | 124.1 (4) |
N2—Pt1—Cl3 | 89.00 (11) | C7—C8—C9 | 119.5 (4) |
N1—Pt1—Cl3 | 89.21 (11) | C7—C8—H5 | 114 (3) |
Cl2—Pt1—Cl3 | 90.60 (5) | C9—C8—H5 | 126 (3) |
Cl4—Pt1—Cl3 | 91.84 (5) | C10—C9—C8 | 119.3 (4) |
N2—Pt1—Cl1 | 88.01 (11) | C10—C9—H6 | 123 (3) |
N1—Pt1—Cl1 | 88.50 (11) | C8—C9—H6 | 117 (3) |
Cl2—Pt1—Cl1 | 92.25 (5) | C9—C10—C11 | 120.2 (4) |
Cl4—Pt1—Cl1 | 90.26 (5) | C9—C10—C12 | 121.4 (4) |
Cl3—Pt1—Cl1 | 176.48 (4) | C11—C10—C12 | 118.4 (4) |
N1—C1—C2 | 120.9 (4) | N2—C11—C10 | 119.9 (4) |
N1—C1—H1 | 116 (2) | N2—C11—H7 | 117 (3) |
C2—C1—H1 | 123 (2) | C10—C11—H7 | 123 (3) |
C1—C2—C3 | 119.4 (4) | O3—C12—O4 | 125.0 (4) |
C1—C2—C6 | 119.4 (4) | O3—C12—C10 | 119.2 (4) |
C3—C2—C6 | 121.1 (4) | O4—C12—C10 | 115.8 (4) |
C4—C3—C2 | 118.7 (4) | C1—N1—C5 | 120.8 (4) |
C4—C3—H2 | 125 (3) | C1—N1—Pt1 | 125.3 (3) |
C2—C3—H2 | 117 (3) | C5—N1—Pt1 | 113.9 (3) |
C5—C4—C3 | 119.8 (4) | C11—N2—C7 | 121.0 (3) |
C5—C4—H3 | 120 (3) | C11—N2—Pt1 | 125.2 (3) |
C3—C4—H3 | 121 (3) | C7—N2—Pt1 | 113.8 (3) |
N1—C5—C4 | 120.4 (4) | C6—O2—H4 | 114 (5) |
N1—C5—C7 | 115.9 (4) | C12—O4—H8 | 122 (4) |
C4—C5—C7 | 123.7 (4) | H9—O5W—H10 | 117 (7) |
| | | |
N1—C1—C2—C3 | −0.7 (7) | C2—C1—N1—Pt1 | −178.9 (3) |
N1—C1—C2—C6 | −178.2 (4) | C4—C5—N1—C1 | 0.3 (7) |
C1—C2—C3—C4 | −0.1 (7) | C7—C5—N1—C1 | −179.4 (4) |
C6—C2—C3—C4 | 177.4 (4) | C4—C5—N1—Pt1 | 179.9 (4) |
C2—C3—C4—C5 | 0.9 (8) | C7—C5—N1—Pt1 | 0.2 (5) |
C3—C4—C5—N1 | −1.0 (7) | N2—Pt1—N1—C1 | 178.9 (4) |
C3—C4—C5—C7 | 178.6 (4) | Cl2—Pt1—N1—C1 | −1.5 (4) |
C1—C2—C6—O1 | 4.3 (8) | Cl3—Pt1—N1—C1 | −92.0 (4) |
C3—C2—C6—O1 | −173.2 (5) | Cl1—Pt1—N1—C1 | 90.7 (4) |
C1—C2—C6—O2 | −176.2 (5) | N2—Pt1—N1—C5 | −0.7 (3) |
C3—C2—C6—O2 | 6.4 (7) | Cl3—Pt1—N1—C5 | 88.4 (3) |
N1—C5—C7—N2 | 0.7 (6) | Cl1—Pt1—N1—C5 | −88.9 (3) |
C4—C5—C7—N2 | −178.9 (4) | C10—C11—N2—C7 | −1.1 (7) |
N1—C5—C7—C8 | 178.8 (4) | C10—C11—N2—Pt1 | 177.8 (3) |
C4—C5—C7—C8 | −0.8 (7) | C8—C7—N2—C11 | −0.5 (7) |
N2—C7—C8—C9 | 1.1 (7) | C5—C7—N2—C11 | 177.7 (4) |
C5—C7—C8—C9 | −177.0 (4) | C8—C7—N2—Pt1 | −179.5 (3) |
C7—C8—C9—C10 | −0.1 (7) | C5—C7—N2—Pt1 | −1.3 (5) |
C8—C9—C10—C11 | −1.5 (7) | N1—Pt1—N2—C11 | −177.9 (4) |
C8—C9—C10—C12 | 177.2 (4) | Cl4—Pt1—N2—C11 | 1.0 (4) |
C9—C10—C11—N2 | 2.1 (7) | Cl3—Pt1—N2—C11 | 92.8 (4) |
C12—C10—C11—N2 | −176.7 (4) | Cl1—Pt1—N2—C11 | −89.1 (4) |
C9—C10—C12—O3 | 159.3 (4) | N1—Pt1—N2—C7 | 1.1 (3) |
C11—C10—C12—O3 | −21.9 (6) | Cl4—Pt1—N2—C7 | 179.9 (3) |
C9—C10—C12—O4 | −20.4 (6) | Cl3—Pt1—N2—C7 | −88.3 (3) |
C11—C10—C12—O4 | 158.3 (4) | Cl1—Pt1—N2—C7 | 89.9 (3) |
C2—C1—N1—C5 | 0.6 (7) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H4···O5W | 0.81 (7) | 1.76 (7) | 2.553 (5) | 164 (8) |
O5W—H10···Cl1i | 0.87 (7) | 2.32 (7) | 3.157 (5) | 163 (6) |
O4—H8···O3ii | 0.75 (6) | 1.93 (6) | 2.667 (5) | 167 (6) |
O5W—H9···O1iii | 0.75 (7) | 2.18 (7) | 2.848 (6) | 150 (7) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x, −y+2, −z−1; (iii) −x+1, y−1/2, −z+3/2. |