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Two new polymorphic forms of combretastatin A-4 {systematic name: 2-meth­oxy-5-[(E)-2-(3,4,5-tri­meth­oxy­phen­yl)ethen­yl]phenol, C18H20O5, CA-4}, an inhibitor of tubulin polymerization at the colchicine binding site, were identified. A number of crystallization attempts led to the ortho­rhom­bic form, with two mol­ecules in the asymmetric part of the unit cell; obtaining a different form required the experiment to be moved to another laboratory. None of the attempts resulted in the monoclinic form described earlier. The three different forms contain mol­ecules of significantly different geometries, which can be related to conformational freedom, postulated as the result of biological studies. In addition, the packing modes in all three forms are basically different. The structural differences at both the mol­ecular and the supra­molecular level have also been studied via calculations of energies and a topological analysis of the electron density. The results confirm the role of weak inter­actions in the determination of crystal architecture and additionally hint at an explanation for the results of crystallization attempts: the new monoclinic form has significantly lower energy than the form reported earlier.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S205322962001236X/vp3009sup1.cif
Contains datablocks global, 1, 2

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S205322962001236X/vp30091sup2.hkl
Contains datablock 1

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S205322962001236X/vp30092sup3.hkl
Contains datablock 2

pdf

Portable Document Format (PDF) file https://doi.org/10.1107/S205322962001236X/vp3009sup4.pdf
Addiitional Tables and Figures

CCDC references: 2030953; 2030952

Computing details top

For both structures, data collection: CrysAlis PRO (Rigaku OD, 2015); cell refinement: CrysAlis PRO (Rigaku OD, 2015); data reduction: CrysAlis PRO (Rigaku OD, 2015); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b); molecular graphics: Mercury (Macrae et al., 2020).

2-Methoxy-5-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenol (1) top
Crystal data top
C18H20O5F(000) = 672
Mr = 316.34Dx = 1.318 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 9.9167 (5) ÅCell parameters from 1286 reflections
b = 6.9587 (5) Åθ = 3.9–25.2°
c = 23.2803 (15) ŵ = 0.10 mm1
β = 96.988 (6)°T = 295 K
V = 1594.58 (17) Å3Block, colourless
Z = 40.25 × 0.2 × 0.1 mm
Data collection top
Rigaku Xcalibur EosS2
diffractometer
3277 independent reflections
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source1952 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.027
Detector resolution: 16.0338 pixels mm-1θmax = 27.7°, θmin = 3.4°
ω scansh = 1212
Absorption correction: multi-scan
(CrysAlis PRO; Rigaku OD, 2015)
k = 78
Tmin = 0.793, Tmax = 1.000l = 3012
5526 measured reflections
Refinement top
Refinement on F2Hydrogen site location: difference Fourier map
Least-squares matrix: fullAll H-atom parameters refined
R[F2 > 2σ(F2)] = 0.047 w = 1/[σ2(Fo2) + (0.0355P)2]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.108(Δ/σ)max = 0.001
S = 1.00Δρmax = 0.15 e Å3
3277 reflectionsΔρmin = 0.17 e Å3
289 parametersExtinction correction: SHELXL2014 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0030 (6)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.64520 (19)0.5250 (3)0.66822 (8)0.0417 (5)
C20.6923 (2)0.3847 (3)0.63298 (8)0.0447 (5)
H20.6367 (19)0.280 (3)0.6220 (7)0.046 (6)*
C30.8193 (2)0.4025 (3)0.61426 (8)0.0444 (5)
O30.87314 (15)0.2769 (2)0.57784 (6)0.0630 (4)
C310.7950 (3)0.1154 (4)0.55791 (13)0.0676 (7)
H31A0.851 (3)0.051 (4)0.5314 (10)0.089 (8)*
H31B0.708 (3)0.155 (3)0.5380 (10)0.084 (9)*
H31C0.779 (2)0.034 (4)0.5893 (10)0.084 (9)*
C40.90185 (19)0.5578 (3)0.63217 (8)0.0417 (5)
O41.03300 (13)0.5646 (2)0.61755 (6)0.0521 (4)
C411.0506 (3)0.6887 (4)0.57004 (12)0.0637 (7)
H41A0.994 (3)0.652 (4)0.5350 (11)0.104 (10)*
H41B1.144 (3)0.681 (4)0.5616 (11)0.109 (10)*
H41C1.032 (2)0.829 (4)0.5808 (10)0.092 (9)*
C50.85588 (19)0.6977 (3)0.66787 (8)0.0408 (5)
O50.94493 (13)0.8433 (2)0.68289 (6)0.0518 (4)
C510.9053 (3)0.9916 (4)0.71985 (11)0.0559 (6)
H51A0.818 (3)1.057 (3)0.7021 (10)0.089 (8)*
H51B0.983 (2)1.080 (3)0.7234 (9)0.075 (7)*
H51C0.890 (2)0.939 (3)0.7587 (9)0.073 (7)*
C60.7269 (2)0.6821 (3)0.68547 (8)0.0429 (5)
H60.6927 (19)0.786 (3)0.7105 (8)0.059 (6)*
C70.5106 (2)0.5001 (3)0.68909 (9)0.0492 (5)
H70.500 (2)0.373 (3)0.7085 (8)0.060 (6)*
C80.4057 (2)0.6211 (3)0.68502 (9)0.0487 (5)
H80.326 (2)0.585 (3)0.7048 (8)0.057 (6)*
C90.38408 (18)0.8059 (3)0.65414 (8)0.0409 (5)
C100.2861 (2)0.9306 (3)0.67065 (8)0.0446 (5)
H100.2391 (18)0.902 (3)0.7030 (7)0.046 (5)*
C110.25260 (19)1.1000 (3)0.64108 (8)0.0439 (5)
O110.15689 (16)1.2179 (2)0.65950 (7)0.0642 (5)
H110.140 (3)1.323 (4)0.6358 (10)0.101 (10)*
C120.31594 (19)1.1449 (3)0.59253 (8)0.0424 (5)
O120.27104 (14)1.3122 (2)0.56505 (6)0.0598 (4)
C1210.3414 (3)1.3783 (5)0.51988 (12)0.0691 (8)
H12A0.331 (3)1.278 (4)0.4871 (11)0.101 (10)*
H12B0.440 (3)1.401 (4)0.5346 (11)0.109 (10)*
H12C0.301 (2)1.501 (4)0.5090 (9)0.083 (8)*
C130.4142 (2)1.0231 (3)0.57612 (8)0.0464 (5)
H130.4551 (18)1.055 (3)0.5417 (7)0.053 (6)*
C140.4478 (2)0.8562 (3)0.60633 (8)0.0459 (5)
H140.513 (2)0.774 (3)0.5935 (8)0.052 (6)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0379 (11)0.0417 (13)0.0455 (11)0.0045 (10)0.0049 (9)0.0074 (10)
C20.0387 (12)0.0405 (13)0.0535 (12)0.0002 (10)0.0004 (10)0.0026 (11)
C30.0435 (12)0.0426 (13)0.0465 (11)0.0101 (10)0.0029 (9)0.0029 (10)
O30.0575 (10)0.0585 (10)0.0746 (10)0.0022 (8)0.0146 (8)0.0248 (8)
C310.083 (2)0.0533 (18)0.0665 (17)0.0064 (16)0.0074 (17)0.0138 (15)
C40.0326 (10)0.0467 (13)0.0457 (11)0.0055 (10)0.0050 (9)0.0035 (10)
O40.0393 (8)0.0574 (10)0.0617 (9)0.0074 (7)0.0151 (7)0.0053 (7)
C410.0594 (17)0.074 (2)0.0603 (16)0.0001 (16)0.0178 (14)0.0075 (15)
C50.0391 (11)0.0383 (12)0.0447 (11)0.0001 (10)0.0036 (9)0.0005 (9)
O50.0440 (8)0.0514 (9)0.0620 (9)0.0086 (7)0.0145 (7)0.0107 (7)
C510.0640 (16)0.0519 (16)0.0537 (14)0.0091 (14)0.0146 (13)0.0105 (12)
C60.0404 (11)0.0420 (13)0.0474 (11)0.0018 (10)0.0096 (9)0.0002 (10)
C70.0443 (12)0.0456 (14)0.0590 (13)0.0027 (11)0.0118 (10)0.0066 (11)
C80.0394 (12)0.0539 (14)0.0551 (12)0.0032 (11)0.0150 (10)0.0031 (11)
C90.0333 (10)0.0465 (13)0.0432 (10)0.0023 (10)0.0061 (9)0.0026 (9)
C100.0373 (11)0.0550 (14)0.0438 (11)0.0001 (10)0.0149 (9)0.0008 (10)
C110.0369 (11)0.0507 (13)0.0462 (11)0.0038 (10)0.0130 (9)0.0030 (10)
O110.0664 (10)0.0659 (11)0.0672 (10)0.0260 (9)0.0356 (8)0.0132 (9)
C120.0385 (11)0.0493 (13)0.0397 (10)0.0024 (10)0.0064 (9)0.0017 (10)
O120.0615 (9)0.0644 (10)0.0577 (9)0.0174 (8)0.0241 (7)0.0183 (8)
C1210.073 (2)0.069 (2)0.0689 (17)0.0104 (17)0.0256 (15)0.0271 (16)
C130.0421 (12)0.0598 (15)0.0395 (11)0.0025 (11)0.0139 (9)0.0000 (11)
C140.0404 (12)0.0530 (15)0.0463 (12)0.0073 (11)0.0133 (10)0.0052 (10)
Geometric parameters (Å, º) top
C1—C61.391 (3)C51—H51C1.00 (2)
C1—C21.392 (3)C6—H61.01 (2)
C1—C71.485 (3)C7—C81.332 (3)
C2—C31.388 (3)C7—H71.01 (2)
C2—H20.933 (19)C8—C91.477 (3)
C3—O31.370 (2)C8—H80.99 (2)
C3—C41.388 (3)C9—C141.390 (3)
O3—C311.411 (3)C9—C101.391 (3)
C31—H31A0.99 (3)C10—C111.385 (3)
C31—H31B0.96 (2)C10—H100.954 (18)
C31—H31C0.95 (2)C11—O111.363 (2)
C4—O41.385 (2)C11—C121.394 (3)
C4—C51.392 (3)O11—H110.92 (3)
O4—C411.431 (3)C12—O121.376 (2)
C41—H41A0.97 (3)C12—C131.380 (3)
C41—H41B0.97 (3)O12—C1211.408 (3)
C41—H41C1.03 (3)C121—H12A1.03 (3)
C5—O51.361 (2)C121—H12B1.01 (3)
C5—C61.394 (3)C121—H12C0.97 (3)
O5—C511.429 (2)C13—C141.377 (3)
C51—H51A1.02 (2)C13—H130.966 (18)
C51—H51B0.98 (2)C14—H140.94 (2)
C6—C1—C2119.73 (19)C1—C6—C5119.97 (19)
C6—C1—C7120.83 (18)C1—C6—H6120.2 (11)
C2—C1—C7119.38 (19)C5—C6—H6119.8 (11)
C3—C2—C1120.3 (2)C8—C7—C1128.9 (2)
C3—C2—H2120.9 (12)C8—C7—H7117.6 (12)
C1—C2—H2118.8 (12)C1—C7—H7113.5 (12)
O3—C3—C2125.01 (19)C7—C8—C9130.6 (2)
O3—C3—C4115.01 (18)C7—C8—H8117.8 (12)
C2—C3—C4119.98 (19)C9—C8—H8111.6 (11)
C3—O3—C31118.2 (2)C14—C9—C10117.71 (19)
O3—C31—H31A104.0 (15)C14—C9—C8123.79 (19)
O3—C31—H31B110.6 (15)C10—C9—C8118.28 (18)
H31A—C31—H31B111 (2)C11—C10—C9121.79 (19)
O3—C31—H31C111.0 (15)C11—C10—H10117.2 (11)
H31A—C31—H31C111 (2)C9—C10—H10121.0 (11)
H31B—C31—H31C108 (2)O11—C11—C10119.34 (18)
O4—C4—C3119.29 (17)O11—C11—C12121.36 (19)
O4—C4—C5120.57 (18)C10—C11—C12119.29 (19)
C3—C4—C5119.98 (18)C11—O11—H11112.0 (17)
C4—O4—C41114.67 (17)O12—C12—C13126.18 (18)
O4—C41—H41A112.3 (16)O12—C12—C11114.47 (17)
O4—C41—H41B109.5 (16)C13—C12—C11119.35 (19)
H41A—C41—H41B107 (2)C12—O12—C121117.51 (18)
O4—C41—H41C110.1 (13)O12—C121—H12A108.4 (15)
H41A—C41—H41C111 (2)O12—C121—H12B110.2 (15)
H41B—C41—H41C107 (2)H12A—C121—H12B111 (2)
O5—C5—C4115.11 (17)O12—C121—H12C104.8 (14)
O5—C5—C6124.91 (18)H12A—C121—H12C113.9 (19)
C4—C5—C6119.98 (19)H12B—C121—H12C108 (2)
C5—O5—C51118.36 (17)C14—C13—C12120.7 (2)
O5—C51—H51A111.1 (13)C14—C13—H13121.0 (11)
O5—C51—H51B103.6 (13)C12—C13—H13118.2 (11)
H51A—C51—H51B111.9 (19)C13—C14—C9121.1 (2)
O5—C51—H51C111.0 (13)C13—C14—H14119.1 (12)
H51A—C51—H51C108.5 (19)C9—C14—H14119.8 (12)
H51B—C51—H51C110.7 (17)
C6—C1—C2—C31.0 (3)C4—C5—C6—C11.2 (3)
C7—C1—C2—C3178.28 (18)C6—C1—C7—C855.8 (3)
C1—C2—C3—O3177.42 (17)C2—C1—C7—C8127.0 (2)
C1—C2—C3—C42.0 (3)C1—C7—C8—C96.9 (4)
C2—C3—O3—C310.6 (3)C7—C8—C9—C1424.8 (3)
C4—C3—O3—C31179.9 (2)C7—C8—C9—C10160.8 (2)
O3—C3—C4—O46.4 (2)C14—C9—C10—C110.3 (3)
C2—C3—C4—O4174.08 (16)C8—C9—C10—C11175.11 (18)
O3—C3—C4—C5178.08 (16)C9—C10—C11—O11179.29 (18)
C2—C3—C4—C51.4 (3)C9—C10—C11—C121.7 (3)
C3—C4—O4—C41101.4 (2)O11—C11—C12—O121.6 (3)
C5—C4—O4—C4183.1 (2)C10—C11—C12—O12177.38 (17)
O4—C4—C5—O54.4 (2)O11—C11—C12—C13178.74 (18)
C3—C4—C5—O5179.88 (16)C10—C11—C12—C132.3 (3)
O4—C4—C5—C6175.62 (16)C13—C12—O12—C1217.7 (3)
C3—C4—C5—C60.2 (3)C11—C12—O12—C121172.7 (2)
C4—C5—O5—C51179.52 (18)O12—C12—C13—C14178.10 (18)
C6—C5—O5—C510.5 (3)C11—C12—C13—C141.6 (3)
C2—C1—C6—C50.6 (3)C12—C13—C14—C90.2 (3)
C7—C1—C6—C5176.64 (18)C10—C9—C14—C130.5 (3)
O5—C5—C6—C1178.89 (16)C8—C9—C14—C13174.00 (18)
2-Methoxy-5-[(E)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenol (2) top
Crystal data top
C18H20O5Dx = 1.274 Mg m3
Mr = 316.34Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pca21Cell parameters from 6871 reflections
a = 25.9293 (7) Åθ = 3.7–26.0°
b = 8.8657 (3) ŵ = 0.09 mm1
c = 14.3503 (5) ÅT = 295 K
V = 3298.87 (18) Å3Prism, colourless
Z = 80.3 × 0.2 × 0.2 mm
F(000) = 1344
Data collection top
Xcalibur, Eos
diffractometer
6241 independent reflections
Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source5060 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
Detector resolution: 16.2413 pixels mm-1θmax = 27.0°, θmin = 3.1°
ω scansh = 3228
Absorption correction: multi-scan
(CrysAlis PRO; Rigaku OD, 2015)
k = 1111
Tmin = 0.837, Tmax = 1.000l = 1618
19387 measured reflections
Refinement top
Refinement on F21 restraint
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.038H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.093 w = 1/[σ2(Fo2) + (0.0484P)2 + 0.1541P]
where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.002
6241 reflectionsΔρmax = 0.12 e Å3
431 parametersΔρmin = 0.13 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C1A0.37378 (10)0.0390 (3)0.4398 (2)0.0472 (6)
C2A0.41006 (10)0.0977 (3)0.50153 (19)0.0475 (6)
H2A0.42300.03750.54920.057*
C3A0.42693 (10)0.2454 (3)0.4922 (2)0.0473 (6)
O3A0.46376 (8)0.3119 (2)0.54636 (15)0.0620 (5)
C31A0.48146 (14)0.2328 (5)0.6256 (3)0.0835 (11)
H31A0.45260.20470.66370.125*
H31B0.50430.29610.66070.125*
H31C0.49950.14370.60610.125*
C4A0.40716 (10)0.3364 (3)0.42173 (19)0.0440 (6)
O4A0.42370 (8)0.48385 (19)0.41356 (14)0.0532 (5)
C41A0.45741 (14)0.5132 (4)0.3367 (2)0.0696 (9)
H41A0.48880.45730.34460.104*
H41B0.46510.61910.33420.104*
H41C0.44090.48300.27980.104*
C5A0.36913 (10)0.2801 (3)0.36276 (19)0.0462 (6)
O5A0.35117 (8)0.3797 (2)0.29787 (15)0.0589 (5)
C51A0.31995 (13)0.3229 (4)0.2244 (2)0.0696 (9)
H51A0.33710.23960.19510.104*
H51B0.31410.40110.17940.104*
H51C0.28750.28960.24920.104*
C6A0.35230 (10)0.1325 (3)0.3724 (2)0.0477 (6)
H6A0.32650.09580.33360.057*
C7A0.36021 (10)0.1226 (3)0.4482 (2)0.0551 (7)
H7A0.36180.16220.50810.066*
C8A0.34598 (10)0.2192 (3)0.3818 (2)0.0566 (7)
H8A0.33750.31550.40260.068*
C9A0.34163 (10)0.1962 (3)0.2804 (2)0.0508 (7)
C10A0.37862 (11)0.1136 (3)0.2305 (2)0.0554 (7)
H10A0.40770.07770.26120.067*
C11A0.37257 (11)0.0853 (3)0.1379 (2)0.0570 (7)
O11A0.40896 (10)0.0001 (3)0.0928 (2)0.0841 (8)
H11A0.396 (2)0.011 (6)0.034 (4)0.14 (2)*
C12A0.33059 (11)0.1421 (4)0.0899 (2)0.0591 (7)
O12A0.32956 (9)0.1045 (3)0.00288 (18)0.0832 (7)
C1210.28899 (17)0.1595 (7)0.0572 (3)0.1145 (16)
H12D0.28670.26690.05000.172*
H12E0.29520.13560.12150.172*
H12F0.25730.11380.03750.172*
C13A0.29515 (11)0.2296 (4)0.1363 (2)0.0650 (8)
H13A0.26730.27080.10430.078*
C14A0.30097 (11)0.2564 (3)0.2316 (2)0.0598 (8)
H14A0.27690.31600.26250.072*
C1B0.42763 (9)0.1464 (3)0.87618 (19)0.0430 (5)
C2B0.38647 (10)0.1113 (3)0.81668 (19)0.0469 (6)
H2B0.38950.03190.77470.056*
C3B0.34166 (9)0.1937 (3)0.82019 (19)0.0460 (6)
O3B0.29932 (7)0.1659 (2)0.76591 (15)0.0600 (5)
C31B0.30430 (13)0.0570 (4)0.6937 (3)0.0731 (10)
H31D0.33250.08420.65380.110*
H31E0.27300.05370.65790.110*
H31F0.31070.04040.72050.110*
C4B0.33683 (9)0.3157 (3)0.8817 (2)0.0482 (6)
O4B0.29291 (7)0.4038 (2)0.87813 (16)0.0634 (5)
C41B0.25780 (13)0.3781 (5)0.9519 (3)0.0887 (12)
H41D0.24910.27300.95410.133*
H41E0.22710.43650.94180.133*
H41F0.27340.40741.00980.133*
C5B0.37766 (10)0.3509 (3)0.9396 (2)0.0476 (6)
O5B0.36984 (7)0.4737 (2)0.99656 (16)0.0641 (6)
C51B0.41135 (13)0.5169 (4)1.0551 (3)0.0841 (12)
H51D0.42150.43271.09290.126*
H51E0.40060.59861.09450.126*
H51F0.44000.54871.01750.126*
C6B0.42259 (10)0.2677 (3)0.93711 (19)0.0458 (6)
H6B0.44970.29280.97650.055*
C7B0.47708 (9)0.0655 (3)0.8765 (2)0.0490 (6)
H7B0.50280.11120.91190.059*
C8B0.49146 (10)0.0625 (3)0.83475 (19)0.0496 (6)
H8B0.52600.08820.84170.059*
C9B0.46040 (9)0.1688 (3)0.77915 (18)0.0439 (6)
C10B0.47509 (10)0.2003 (3)0.68782 (19)0.0464 (6)
H10B0.50460.15530.66340.056*
C11B0.44673 (10)0.2968 (3)0.63325 (19)0.0468 (6)
O11B0.46226 (8)0.3222 (3)0.54421 (15)0.0660 (6)
H11B0.4434 (19)0.401 (6)0.525 (4)0.129 (17)*
C12B0.40256 (10)0.3655 (3)0.6695 (2)0.0477 (6)
O12B0.37597 (8)0.4529 (3)0.60644 (16)0.0677 (6)
C1220.33565 (14)0.5404 (5)0.6377 (3)0.0877 (12)
H12A0.34760.60550.68670.132*
H12B0.32260.60030.58730.132*
H12C0.30870.47650.66110.132*
C13B0.38878 (11)0.3395 (3)0.7603 (2)0.0536 (7)
H13B0.36000.38750.78530.064*
C14B0.41767 (10)0.2415 (3)0.8152 (2)0.0531 (7)
H14B0.40810.22480.87680.064*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C1A0.0491 (14)0.0432 (14)0.0492 (16)0.0015 (12)0.0059 (12)0.0023 (12)
C2A0.0525 (14)0.0475 (15)0.0427 (15)0.0012 (12)0.0032 (12)0.0047 (12)
C3A0.0501 (14)0.0499 (15)0.0419 (15)0.0001 (12)0.0015 (12)0.0016 (12)
O3A0.0728 (12)0.0598 (13)0.0533 (12)0.0116 (10)0.0167 (10)0.0052 (9)
C31A0.091 (2)0.097 (3)0.063 (2)0.025 (2)0.027 (2)0.021 (2)
C4A0.0542 (14)0.0351 (13)0.0426 (14)0.0004 (11)0.0040 (12)0.0039 (11)
O4A0.0709 (11)0.0407 (10)0.0480 (11)0.0042 (9)0.0027 (9)0.0042 (8)
C41A0.086 (2)0.0601 (19)0.063 (2)0.0154 (16)0.0132 (17)0.0016 (15)
C5A0.0526 (14)0.0402 (14)0.0458 (16)0.0064 (11)0.0003 (12)0.0017 (11)
O5A0.0712 (12)0.0427 (10)0.0628 (13)0.0001 (9)0.0200 (10)0.0044 (9)
C51A0.083 (2)0.065 (2)0.062 (2)0.0056 (17)0.0217 (17)0.0086 (16)
C6A0.0483 (13)0.0427 (13)0.0521 (16)0.0009 (11)0.0028 (13)0.0031 (12)
C7A0.0593 (16)0.0469 (17)0.0590 (19)0.0049 (13)0.0030 (14)0.0082 (14)
C8A0.0576 (15)0.0396 (14)0.072 (2)0.0050 (12)0.0058 (15)0.0082 (14)
C9A0.0507 (15)0.0368 (14)0.0648 (19)0.0015 (11)0.0062 (13)0.0027 (13)
C10A0.0516 (15)0.0530 (17)0.062 (2)0.0059 (13)0.0045 (13)0.0050 (14)
C11A0.0545 (15)0.0520 (17)0.064 (2)0.0048 (13)0.0102 (14)0.0046 (14)
O11A0.0778 (16)0.107 (2)0.0674 (17)0.0348 (14)0.0092 (13)0.0084 (14)
C12A0.0558 (16)0.0620 (18)0.0594 (19)0.0025 (14)0.0056 (15)0.0078 (15)
O12A0.0787 (14)0.109 (2)0.0617 (16)0.0134 (14)0.0012 (12)0.0011 (14)
C1210.102 (3)0.168 (5)0.074 (3)0.032 (3)0.022 (2)0.004 (3)
C13A0.0535 (16)0.067 (2)0.074 (2)0.0096 (14)0.0038 (15)0.0146 (17)
C14A0.0598 (17)0.0480 (16)0.071 (2)0.0106 (14)0.0084 (15)0.0032 (15)
C1B0.0458 (12)0.0419 (13)0.0412 (14)0.0018 (10)0.0050 (12)0.0021 (11)
C2B0.0486 (14)0.0457 (14)0.0463 (16)0.0015 (11)0.0051 (11)0.0064 (12)
C3B0.0431 (13)0.0489 (15)0.0462 (15)0.0045 (11)0.0057 (12)0.0022 (12)
O3B0.0483 (10)0.0689 (13)0.0628 (13)0.0001 (9)0.0137 (9)0.0130 (10)
C31B0.0688 (19)0.077 (2)0.073 (2)0.0023 (17)0.0217 (17)0.0240 (18)
C4B0.0439 (13)0.0514 (15)0.0492 (16)0.0019 (11)0.0020 (12)0.0016 (13)
O4B0.0513 (10)0.0742 (14)0.0648 (13)0.0136 (9)0.0008 (10)0.0094 (11)
C41B0.0528 (17)0.122 (3)0.092 (3)0.002 (2)0.0125 (18)0.020 (2)
C5B0.0509 (14)0.0452 (15)0.0465 (15)0.0028 (12)0.0002 (12)0.0087 (12)
O5B0.0588 (11)0.0631 (13)0.0704 (15)0.0048 (10)0.0053 (11)0.0291 (11)
C51B0.074 (2)0.078 (2)0.101 (3)0.0065 (18)0.020 (2)0.050 (2)
C6B0.0454 (13)0.0473 (15)0.0446 (15)0.0040 (12)0.0061 (11)0.0064 (12)
C7B0.0476 (13)0.0523 (15)0.0472 (15)0.0025 (12)0.0106 (13)0.0078 (12)
C8B0.0478 (13)0.0515 (15)0.0494 (16)0.0036 (12)0.0096 (12)0.0039 (13)
C9B0.0477 (13)0.0400 (14)0.0440 (15)0.0050 (11)0.0016 (11)0.0003 (11)
C10B0.0489 (14)0.0418 (14)0.0484 (16)0.0026 (12)0.0014 (12)0.0013 (11)
C11B0.0546 (14)0.0443 (15)0.0415 (15)0.0049 (12)0.0038 (12)0.0044 (11)
O11B0.0718 (13)0.0760 (16)0.0503 (12)0.0270 (12)0.0151 (10)0.0173 (11)
C12B0.0508 (14)0.0412 (14)0.0510 (16)0.0075 (12)0.0029 (12)0.0058 (12)
O12B0.0720 (12)0.0715 (14)0.0596 (14)0.0302 (11)0.0081 (10)0.0132 (11)
C1220.084 (2)0.106 (3)0.074 (2)0.050 (2)0.001 (2)0.003 (2)
C13B0.0580 (15)0.0469 (16)0.0560 (18)0.0075 (13)0.0120 (14)0.0008 (13)
C14B0.0644 (16)0.0510 (16)0.0439 (16)0.0009 (13)0.0057 (13)0.0057 (13)
Geometric parameters (Å, º) top
C1A—C6A1.390 (4)C1B—C6B1.392 (4)
C1A—C2A1.393 (4)C1B—C2B1.402 (3)
C1A—C7A1.480 (4)C1B—C7B1.469 (3)
C2A—C3A1.387 (4)C2B—C3B1.374 (4)
C2A—H2A0.9300C2B—H2B0.9300
C3A—O3A1.365 (3)C3B—O3B1.369 (3)
C3A—C4A1.392 (4)C3B—C4B1.401 (4)
O3A—C31A1.412 (4)O3B—C31B1.423 (4)
C31A—H31A0.9600C31B—H31D0.9600
C31A—H31B0.9600C31B—H31E0.9600
C31A—H31C0.9600C31B—H31F0.9600
C4A—O4A1.381 (3)C4B—C5B1.382 (4)
C4A—C5A1.392 (4)C4B—O4B1.382 (3)
O4A—C41A1.431 (4)O4B—C41B1.415 (4)
C41A—H41A0.9600C41B—H41D0.9600
C41A—H41B0.9600C41B—H41E0.9600
C41A—H41C0.9600C41B—H41F0.9600
C5A—O5A1.365 (3)C5B—O5B1.376 (3)
C5A—C6A1.386 (4)C5B—C6B1.380 (4)
O5A—C51A1.421 (4)O5B—C51B1.418 (4)
C51A—H51A0.9600C51B—H51D0.9600
C51A—H51B0.9600C51B—H51E0.9600
C51A—H51C0.9600C51B—H51F0.9600
C6A—H6A0.9300C6B—H6B0.9300
C7A—C8A1.333 (4)C7B—C8B1.337 (4)
C7A—H7A0.9300C7B—H7B0.9300
C8A—C9A1.474 (4)C8B—C9B1.474 (4)
C8A—H8A0.9300C8B—H8B0.9300
C9A—C14A1.374 (4)C9B—C14B1.382 (4)
C9A—C10A1.403 (4)C9B—C10B1.393 (4)
C10A—C11A1.361 (4)C10B—C11B1.374 (4)
C10A—H10A0.9300C10B—H10B0.9300
C11A—O11A1.372 (4)C11B—O11B1.359 (3)
C11A—C12A1.384 (4)C11B—C12B1.397 (4)
O11A—H11A0.92 (6)O11B—H11B0.89 (5)
C12A—O12A1.373 (4)C12B—C13B1.371 (4)
C12A—C13A1.374 (4)C12B—O12B1.376 (3)
O12A—C1211.398 (4)O12B—C1221.377 (4)
C121—H12D0.9600C122—H12A0.9600
C121—H12E0.9600C122—H12B0.9600
C121—H12F0.9600C122—H12C0.9600
C13A—C14A1.396 (5)C13B—C14B1.391 (4)
C13A—H13A0.9300C13B—H13B0.9300
C14A—H14A0.9300C14B—H14B0.9300
C6A—C1A—C2A119.4 (2)C6B—C1B—C2B118.9 (2)
C6A—C1A—C7A122.6 (3)C6B—C1B—C7B117.2 (2)
C2A—C1A—C7A118.0 (2)C2B—C1B—C7B123.9 (2)
C3A—C2A—C1A120.3 (3)C3B—C2B—C1B120.2 (2)
C3A—C2A—H2A119.9C3B—C2B—H2B119.9
C1A—C2A—H2A119.9C1B—C2B—H2B119.9
O3A—C3A—C2A125.0 (3)O3B—C3B—C2B124.2 (2)
O3A—C3A—C4A114.9 (2)O3B—C3B—C4B115.2 (2)
C2A—C3A—C4A120.1 (2)C2B—C3B—C4B120.6 (2)
C3A—O3A—C31A118.1 (2)C3B—O3B—C31B117.7 (2)
O3A—C31A—H31A109.5O3B—C31B—H31D109.5
O3A—C31A—H31B109.5O3B—C31B—H31E109.5
H31A—C31A—H31B109.5H31D—C31B—H31E109.5
O3A—C31A—H31C109.5O3B—C31B—H31F109.5
H31A—C31A—H31C109.5H31D—C31B—H31F109.5
H31B—C31A—H31C109.5H31E—C31B—H31F109.5
O4A—C4A—C3A119.7 (2)C5B—C4B—O4B121.7 (2)
O4A—C4A—C5A120.6 (2)C5B—C4B—C3B119.0 (2)
C3A—C4A—C5A119.6 (2)O4B—C4B—C3B119.1 (2)
C4A—O4A—C41A115.3 (2)C4B—O4B—C41B114.3 (3)
O4A—C41A—H41A109.5O4B—C41B—H41D109.5
O4A—C41A—H41B109.5O4B—C41B—H41E109.5
H41A—C41A—H41B109.5H41D—C41B—H41E109.5
O4A—C41A—H41C109.5O4B—C41B—H41F109.5
H41A—C41A—H41C109.5H41D—C41B—H41F109.5
H41B—C41A—H41C109.5H41E—C41B—H41F109.5
O5A—C5A—C6A124.8 (2)O5B—C5B—C6B124.3 (2)
O5A—C5A—C4A115.1 (2)O5B—C5B—C4B115.0 (2)
C6A—C5A—C4A120.1 (2)C6B—C5B—C4B120.7 (2)
C5A—O5A—C51A118.1 (2)C5B—O5B—C51B117.0 (2)
O5A—C51A—H51A109.5O5B—C51B—H51D109.5
O5A—C51A—H51B109.5O5B—C51B—H51E109.5
H51A—C51A—H51B109.5H51D—C51B—H51E109.5
O5A—C51A—H51C109.5O5B—C51B—H51F109.5
H51A—C51A—H51C109.5H51D—C51B—H51F109.5
H51B—C51A—H51C109.5H51E—C51B—H51F109.5
C5A—C6A—C1A120.4 (2)C5B—C6B—C1B120.6 (2)
C5A—C6A—H6A119.8C5B—C6B—H6B119.7
C1A—C6A—H6A119.8C1B—C6B—H6B119.7
C8A—C7A—C1A129.0 (3)C8B—C7B—C1B131.0 (2)
C8A—C7A—H7A115.5C8B—C7B—H7B114.5
C1A—C7A—H7A115.5C1B—C7B—H7B114.5
C7A—C8A—C9A129.6 (3)C7B—C8B—C9B129.3 (2)
C7A—C8A—H8A115.2C7B—C8B—H8B115.4
C9A—C8A—H8A115.2C9B—C8B—H8B115.4
C14A—C9A—C10A117.8 (3)C14B—C9B—C10B118.5 (2)
C14A—C9A—C8A120.6 (3)C14B—C9B—C8B122.2 (2)
C10A—C9A—C8A121.6 (3)C10B—C9B—C8B119.2 (2)
C11A—C10A—C9A121.0 (3)C11B—C10B—C9B121.0 (2)
C11A—C10A—H10A119.5C11B—C10B—H10B119.5
C9A—C10A—H10A119.5C9B—C10B—H10B119.5
C10A—C11A—O11A118.9 (3)O11B—C11B—C10B118.7 (2)
C10A—C11A—C12A120.7 (3)O11B—C11B—C12B121.4 (2)
O11A—C11A—C12A120.4 (3)C10B—C11B—C12B119.9 (3)
C11A—O11A—H11A104 (3)C11B—O11B—H11B105 (3)
O12A—C12A—C13A126.4 (3)C13B—C12B—O12B126.1 (2)
O12A—C12A—C11A114.2 (3)C13B—C12B—C11B119.6 (2)
C13A—C12A—C11A119.3 (3)O12B—C12B—C11B114.3 (2)
C12A—O12A—C121118.1 (3)C12B—O12B—C122118.9 (3)
O12A—C121—H12D109.5O12B—C122—H12A109.5
O12A—C121—H12E109.5O12B—C122—H12B109.5
H12D—C121—H12E109.5H12A—C122—H12B109.5
O12A—C121—H12F109.5O12B—C122—H12C109.5
H12D—C121—H12F109.5H12A—C122—H12C109.5
H12E—C121—H12F109.5H12B—C122—H12C109.5
C12A—C13A—C14A119.9 (3)C12B—C13B—C14B120.2 (3)
C12A—C13A—H13A120.1C12B—C13B—H13B119.9
C14A—C13A—H13A120.1C14B—C13B—H13B119.9
C9A—C14A—C13A121.1 (3)C9B—C14B—C13B120.7 (3)
C9A—C14A—H14A119.5C9B—C14B—H14B119.6
C13A—C14A—H14A119.5C13B—C14B—H14B119.6
C6A—C1A—C2A—C3A3.9 (4)C6B—C1B—C2B—C3B1.3 (4)
C7A—C1A—C2A—C3A175.2 (2)C7B—C1B—C2B—C3B179.3 (3)
C1A—C2A—C3A—O3A177.2 (2)C1B—C2B—C3B—O3B178.9 (3)
C1A—C2A—C3A—C4A0.8 (4)C1B—C2B—C3B—C4B1.3 (4)
C2A—C3A—O3A—C31A8.9 (4)C2B—C3B—O3B—C31B8.0 (4)
C4A—C3A—O3A—C31A173.1 (3)C4B—C3B—O3B—C31B171.7 (3)
O3A—C3A—C4A—O4A2.6 (4)O3B—C3B—C4B—C5B179.5 (3)
C2A—C3A—C4A—O4A179.3 (2)C2B—C3B—C4B—C5B0.7 (4)
O3A—C3A—C4A—C5A179.6 (2)O3B—C3B—C4B—O4B5.1 (4)
C2A—C3A—C4A—C5A2.2 (4)C2B—C3B—C4B—O4B174.7 (2)
C3A—C4A—O4A—C41A106.9 (3)C5B—C4B—O4B—C41B79.8 (4)
C5A—C4A—O4A—C41A76.0 (3)C3B—C4B—O4B—C41B104.9 (3)
O4A—C4A—C5A—O5A1.0 (4)O4B—C4B—C5B—O5B3.7 (4)
C3A—C4A—C5A—O5A178.0 (2)C3B—C4B—C5B—O5B179.0 (2)
O4A—C4A—C5A—C6A179.1 (2)O4B—C4B—C5B—C6B175.3 (3)
C3A—C4A—C5A—C6A2.1 (4)C3B—C4B—C5B—C6B0.0 (4)
C6A—C5A—O5A—C51A11.8 (4)C6B—C5B—O5B—C51B0.8 (5)
C4A—C5A—O5A—C51A168.1 (3)C4B—C5B—O5B—C51B178.1 (3)
O5A—C5A—C6A—C1A178.8 (3)O5B—C5B—C6B—C1B178.9 (3)
C4A—C5A—C6A—C1A1.1 (4)C4B—C5B—C6B—C1B0.0 (4)
C2A—C1A—C6A—C5A4.1 (4)C2B—C1B—C6B—C5B0.7 (4)
C7A—C1A—C6A—C5A175.0 (3)C7B—C1B—C6B—C5B178.8 (3)
C6A—C1A—C7A—C8A30.6 (4)C6B—C1B—C7B—C8B171.6 (3)
C2A—C1A—C7A—C8A148.6 (3)C2B—C1B—C7B—C8B10.3 (5)
C1A—C7A—C8A—C9A2.9 (5)C1B—C7B—C8B—C9B4.4 (6)
C7A—C8A—C9A—C14A139.2 (3)C7B—C8B—C9B—C14B59.4 (4)
C7A—C8A—C9A—C10A41.2 (4)C7B—C8B—C9B—C10B122.2 (3)
C14A—C9A—C10A—C11A4.4 (4)C14B—C9B—C10B—C11B2.6 (4)
C8A—C9A—C10A—C11A175.9 (3)C8B—C9B—C10B—C11B179.0 (2)
C9A—C10A—C11A—O11A177.9 (3)C9B—C10B—C11B—O11B179.1 (2)
C9A—C10A—C11A—C12A2.4 (4)C9B—C10B—C11B—C12B0.3 (4)
C10A—C11A—C12A—O12A180.0 (3)O11B—C11B—C12B—C13B178.6 (3)
O11A—C11A—C12A—O12A0.3 (4)C10B—C11B—C12B—C13B2.0 (4)
C10A—C11A—C12A—C13A0.8 (4)O11B—C11B—C12B—O12B2.8 (4)
O11A—C11A—C12A—C13A178.8 (3)C10B—C11B—C12B—O12B176.5 (3)
C13A—C12A—O12A—C1210.3 (5)C13B—C12B—O12B—C1229.6 (5)
C11A—C12A—O12A—C121178.8 (4)C11B—C12B—O12B—C122171.9 (3)
O12A—C12A—C13A—C14A179.0 (3)O12B—C12B—C13B—C14B176.3 (3)
C11A—C12A—C13A—C14A1.9 (5)C11B—C12B—C13B—C14B2.1 (4)
C10A—C9A—C14A—C13A3.3 (4)C10B—C9B—C14B—C13B2.5 (4)
C8A—C9A—C14A—C13A177.0 (3)C8B—C9B—C14B—C13B179.1 (3)
C12A—C13A—C14A—C9A0.2 (5)C12B—C13B—C14B—C9B0.2 (4)
Relevant geometrical data (Å, °) top
12A2BTIJYERFIYJAYQESRUC
C3—C4—O4—C41101.4 (2)106.9 (3)104.9 (3)93.6-100.389.1
C5—C4—O4–C41-83.2 (2)-76.0 (3)-79.8 (4)-98.382.5-92.7
O4—C4—C5—O54.5 (2)1.0 (4)3.7 (4)12.4-2.5-2.9
C6—C1—C7—C855.8 (3)30.6 (4)-10.3 (5)18.9-58.1-31.2
C2—C1—C7—C8-127.0 (2)-148.6 (3)171.6 (3)165.3126.7152.1
C1—C7—C8—C96.9 (4)2.9 (5)-4.4 (6)9.4-6.5-7.1
C7—C8—C9—C10-160.8 (2)41.2 (4)122.2 (3)40.1169.9147.7
C7—C8—C9—C1424.8 (3)-139.2 (3)-59.4 (4)-144.0-15.8-37.2
A/B58.56 (10)32.83 (13)11.72 (19)22.459.634.2
B/C26.47 (15)42.40 (15)60.99 (12)43.217.539.0
A/C65.21 (7)41.27 (12)61.45 (8)53.066.052.5
A/OMe31.9 (2)8.6 (3)1.9 (4)8.72.19.3
A/OMe480.44 (12)74.58 (15)77.22 (18)87.780.987.8
A/OMe50.7 (2)11.0 (3)8.3 (4)7.82.134.0
Values of torsion angles (°) used to describe conformations for CA-4 molecule in crystal structures 1, 2 and TIJYER (X-ray) and optimized at the MP2/TZ and M06-2X/TZ level top
X-rayMP2/TZM06-2X/TZ
1
C8—C7—C1—C655.834.737.2
C7—C8–C9—C10-160.8-129.4-139.5
2A
C8—C7—C1—C630.533.332.6
C7–C8–C9—C1041.244.037.1
2B
C8—C7—C1—C6-10.4-34.7-37.2
C7—C8–C9—C10122.2129.4139.5
TIJYER
C8—C7—C1—C6-18.9-33.3-32.6
C7—C8—C9—C10-40.1-44.0-37.2
Calculated relative energies for combretastatin A-4 conformations (in kcal mol-1) top
ConformationMP2/TZ Torsion angles C6—C1—C7—C8/C7—C8—C9—C10MP2/TZ EnergyM06-2X/TZ Torsion angles C6—C1—C7—C8/C7—C8—C9—C10M06-2X/TZ Energy
1-34.9/129.6 (34.9/-129.6)0.00-36.7/139.4 (36.7/-139.4)0.00
233.3/44.0 (-33.3/-44.0)0.1532.6/37.1 (-32.6/-37.2)0.15
3-30.1/-44.1 (30.1/44.1)0.27-31.5/-37.2 (31.5/37.2)0.20
434.7/-129.4 (-34.7/129.4)0.2037.2/-139.5 (-37.2/139.5)0.23
For each of the conformations in the Table, there is its centrosymmetric counterpart (1′, 2′, etc.) with opposite signs of the torsion angles and exactly the same energy.
Hydrogen-bond data (Å, °) top
D—H···AD—HH···AD···AD—H···A
1
O11—H11···O4i0.92 (3)2.00 (3)2.827 (2)148 (2)
2
O11B—H11B···O4Aii0.89 (5)1.96 (5)2.733 (3)143 (5)
TIJYER
O11—H11···O3iii0.832.272.905134
Symmetry codes: (i) x-1, y+1, z; (ii) x, y-1, z; (iii) x-1, y, z-1.
 

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