In this present study, the crystal structure of 2,2,2-trifluoroacetophenone (TFAP) is determined using in situ cryocrystallization techniques. The main objective of this work is to study its crystal packing associated with the various intermolecular interactions, along with a detailed comparison with the features of substituted analogs. It is interesting to note how the chemical substitution of different functional groups influences the crystal packing, the electronic environment of the molecule and the nature of the various intermolecular interactions.
Supporting information
CCDC reference: 1578858
Key indicators
- Single-crystal X-ray study
- T = 110 K
- Mean (C-C) = 0.002 Å
- R factor = 0.024
- wR factor = 0.064
- Data-to-parameter ratio = 9.6
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT029_ALERT_3_A _diffrn_measured_fraction_theta_full value Low . 0.708 Why?
| Author Response: Discussed in the text
|
Alert level B
PLAT480_ALERT_4_B Long H...A H-Bond Reported H6 ..F3 2.94 Ang.
PLAT480_ALERT_4_B Long H...A H-Bond Reported H5 ..F3 2.98 Ang.
Alert level C
PLAT088_ALERT_3_C Poor Data / Parameter Ratio .................... 9.59 Note
PLAT480_ALERT_4_C Long H...A H-Bond Reported H5 ..F2 2.63 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H4 ..O1 2.74 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H6 ..F2 2.69 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H3 ..O1 2.95 Ang.
PLAT481_ALERT_4_C Long D...A H-Bond Reported C3 ..O1 3.88 Ang.
PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 48 Report
Alert level G
PLAT952_ALERT_5_G Calculated (ThMax) and CIF-Reported Lmax Differ 5 Units
PLAT958_ALERT_1_G Calculated (ThMax) and Actual (FCF) Lmax Differ 5 Units
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 1 Info
1 ALERT level A = Most likely a serious problem - resolve or explain
2 ALERT level B = A potentially serious problem, consider carefully
7 ALERT level C = Check. Ensure it is not caused by an omission or oversight
3 ALERT level G = General information/check it is not something unexpected
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
7 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
Data collection: APEX2 (Bruker, 2012); cell refinement: SAINT (Bruker, 2012); data reduction: SAINT (Bruker, 2012); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL2016/6 (Sheldrick, 2015); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: CIFTAB (Sheldrick, 2008) and
PLATON (Spek, 2009).
2,2,2-Trifluoroacetophenone
top
Crystal data top
C8H5F3O | F(000) = 704 |
Mr = 174.12 | Dx = 1.589 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 13.8129 (3) Å | Cell parameters from 5549 reflections |
b = 12.6034 (2) Å | θ = 2.2–30.2° |
c = 8.3595 (2) Å | µ = 0.16 mm−1 |
β = 90.396 (1)° | T = 110 K |
V = 1455.27 (5) Å3 | Block, colorless |
Z = 8 | 0.30 × 0.30 × 0.30 mm |
Data collection top
Bruker APEXII CCD diffractometer | 944 reflections with I > 2σ(I) |
Radiation source: fine focus sealed tube | Rint = 0.014 |
ω scans | θmax = 26.7°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −17→17 |
Tmin = 0.697, Tmax = 0.746 | k = −15→15 |
9958 measured reflections | l = −5→5 |
1045 independent reflections | |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.024 | H-atom parameters constrained |
wR(F2) = 0.064 | w = 1/[σ2(Fo2) + (0.0305P)2 + 0.8314P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max < 0.001 |
1045 reflections | Δρmax = 0.19 e Å−3 |
109 parameters | Δρmin = −0.20 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
F1 | 0.27357 (5) | 0.43371 (5) | 0.83259 (12) | 0.0310 (3) | |
F2 | 0.33321 (6) | 0.40770 (6) | 1.06711 (16) | 0.0376 (4) | |
F3 | 0.42716 (5) | 0.44771 (5) | 0.87193 (13) | 0.0331 (3) | |
O1 | 0.36355 (6) | 0.21263 (7) | 0.98806 (15) | 0.0268 (3) | |
C4 | 0.39488 (8) | 0.16370 (10) | 0.3960 (2) | 0.0278 (5) | |
H4 | 0.402903 | 0.138083 | 0.290060 | 0.033* | |
C5 | 0.38764 (9) | 0.27193 (10) | 0.4248 (2) | 0.0273 (5) | |
H5 | 0.390579 | 0.320406 | 0.337898 | 0.033* | |
C6 | 0.37625 (8) | 0.30955 (9) | 0.5781 (2) | 0.0223 (5) | |
H6 | 0.371252 | 0.383735 | 0.596420 | 0.027* | |
C1 | 0.37202 (7) | 0.23921 (9) | 0.7068 (2) | 0.0176 (5) | |
C7 | 0.36188 (7) | 0.27209 (9) | 0.8742 (2) | 0.0200 (5) | |
C8 | 0.34856 (9) | 0.39204 (9) | 0.9128 (3) | 0.0241 (5) | |
C3 | 0.39028 (9) | 0.09306 (9) | 0.5237 (2) | 0.0259 (5) | |
H3 | 0.395028 | 0.018927 | 0.504787 | 0.031* | |
C2 | 0.37893 (8) | 0.12990 (9) | 0.6766 (2) | 0.0235 (5) | |
H2 | 0.375707 | 0.081052 | 0.762999 | 0.028* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
F1 | 0.0323 (4) | 0.0267 (4) | 0.0339 (10) | 0.0079 (3) | 0.0017 (4) | 0.0015 (3) |
F2 | 0.0604 (5) | 0.0314 (4) | 0.0210 (13) | 0.0015 (3) | 0.0051 (5) | −0.0069 (4) |
F3 | 0.0336 (4) | 0.0239 (3) | 0.0420 (9) | −0.0065 (3) | 0.0030 (4) | −0.0046 (3) |
O1 | 0.0382 (5) | 0.0281 (4) | 0.0142 (12) | −0.0003 (3) | 0.0004 (4) | 0.0047 (5) |
C4 | 0.0263 (6) | 0.0403 (7) | 0.0169 (16) | −0.0026 (5) | 0.0001 (6) | −0.0063 (7) |
C5 | 0.0330 (6) | 0.0347 (7) | 0.0141 (19) | −0.0028 (5) | 0.0007 (6) | 0.0079 (7) |
C6 | 0.0281 (6) | 0.0234 (6) | 0.0156 (18) | −0.0001 (4) | 0.0004 (6) | 0.0031 (6) |
C1 | 0.0193 (5) | 0.0217 (5) | 0.0118 (17) | −0.0007 (4) | −0.0007 (5) | 0.0013 (6) |
C7 | 0.0207 (5) | 0.0220 (6) | 0.0171 (17) | −0.0011 (4) | −0.0002 (5) | 0.0032 (7) |
C8 | 0.0296 (6) | 0.0248 (6) | 0.018 (2) | −0.0003 (4) | 0.0021 (6) | −0.0021 (6) |
C3 | 0.0338 (6) | 0.0253 (6) | 0.0187 (17) | −0.0013 (4) | 0.0001 (6) | −0.0048 (7) |
C2 | 0.0293 (6) | 0.0215 (6) | 0.0197 (18) | −0.0011 (4) | −0.0012 (6) | 0.0026 (6) |
Geometric parameters (Å, º) top
F1—C8 | 1.3373 (17) | C6—C1 | 1.396 (2) |
F2—C8 | 1.324 (2) | C6—H6 | 0.9500 |
F3—C8 | 1.3389 (15) | C1—C2 | 1.4040 (15) |
O1—C7 | 1.2112 (18) | C1—C7 | 1.467 (2) |
C4—C5 | 1.3888 (19) | C7—C8 | 1.5569 (16) |
C4—C3 | 1.392 (2) | C3—C2 | 1.370 (2) |
C4—H4 | 0.9500 | C3—H3 | 0.9500 |
C5—C6 | 1.377 (2) | C2—H2 | 0.9500 |
C5—H5 | 0.9500 | | |
| | | |
C5—C4—C3 | 119.46 (17) | C1—C7—C8 | 118.93 (13) |
C5—C4—H4 | 120.3 | F2—C8—F1 | 107.54 (12) |
C3—C4—H4 | 120.3 | F2—C8—F3 | 107.82 (12) |
C6—C5—C4 | 120.53 (15) | F1—C8—F3 | 107.05 (12) |
C6—C5—H5 | 119.7 | F2—C8—C7 | 111.48 (12) |
C4—C5—H5 | 119.7 | F1—C8—C7 | 111.71 (12) |
C5—C6—C1 | 120.32 (13) | F3—C8—C7 | 111.03 (11) |
C5—C6—H6 | 119.8 | C2—C3—C4 | 120.33 (13) |
C1—C6—H6 | 119.8 | C2—C3—H3 | 119.8 |
C6—C1—C2 | 118.78 (16) | C4—C3—H3 | 119.8 |
C6—C1—C7 | 124.10 (12) | C3—C2—C1 | 120.58 (14) |
C2—C1—C7 | 117.11 (13) | C3—C2—H2 | 119.7 |
O1—C7—C1 | 124.96 (12) | C1—C2—H2 | 119.7 |
O1—C7—C8 | 116.10 (16) | | |
| | | |
C3—C4—C5—C6 | 0.17 (18) | C1—C7—C8—F2 | 175.26 (9) |
C4—C5—C6—C1 | 0.12 (17) | O1—C7—C8—F1 | −125.49 (14) |
C5—C6—C1—C2 | −0.42 (16) | C1—C7—C8—F1 | 54.91 (16) |
C5—C6—C1—C7 | 178.79 (10) | O1—C7—C8—F3 | 115.10 (15) |
C6—C1—C7—O1 | −175.62 (11) | C1—C7—C8—F3 | −64.50 (17) |
C2—C1—C7—O1 | 3.60 (16) | C5—C4—C3—C2 | −0.15 (18) |
C6—C1—C7—C8 | 3.94 (15) | C4—C3—C2—C1 | −0.15 (17) |
C2—C1—C7—C8 | −176.84 (10) | C6—C1—C2—C3 | 0.43 (16) |
O1—C7—C8—F2 | −5.15 (14) | C7—C1—C2—C3 | −178.83 (10) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···F1 | 0.95 | 2.48 | 3.004 (2) | 115 |
C6—H6···F3 | 0.95 | 2.55 | 3.088 (2) | 116 |
C5—H5···F2i | 0.95 | 2.63 | 3.522 (2) | 156 |
C4—H4···O1i | 0.95 | 2.74 | 3.490 (2) | 136 |
C6—H6···F2ii | 0.95 | 2.69 | 3.614 (2) | 163 |
C6—H6···F3ii | 0.95 | 2.94 | 3.584 (2) | 126 |
C5—H5···F3ii | 0.95 | 2.98 | 3.603 (2) | 124 |
C3—H3···O1iii | 0.95 | 2.95 | 3.882 (2) | 166 |
Symmetry codes: (i) x, y, z−1; (ii) x, −y+1, z−1/2; (iii) x, −y, z−1/2. |
Stabilization energies (in kJ mol-1) of the individual molecular pairs topCD = centroid–centroid distance. |
Motif | Symmetry | CD (Å) | ECoul | EPol | EDisp | ERep | ETot | Possible Interactions | Geometry (Å, °) |
I | -x + 1, y, -z + 3/2 | 3.731 | -5.6 | -1.7 | -26.2 | 14.6 | -18.8 | C7···C6 | 3.6668 (1) |
| | | | | | | | C1···C1 | 3.6035 (1) |
| | | | | | | | C2···C2 | 3.5545 (1) |
| | | | | | | | C8—F3···F3-C8 | 2.8743 (1), 139, 139 |
II | -x + 1/2, -y + 1/2, -z + 1 | 5.470 | -3.5 | -0.9 | -20.4 | 10.2 | -14.5 | π–π stacking | 3.7869 (1) |
| | | | | | | | C8—F1···C4 | 3.2425 (1), 134 |
III | -x + 1/2, -y + 1/2, -z + 2 | 5.274 | -5.2 | -1.5 | -12.6 | 6.7 | -12.7 | C7-O1···F2-C8 | 3.1436 (1), 100, 96 |
| | | | | | | | C7—O1···F1-C8 | 3.0457, 139, 90 |
IV | x, y, z + 1 | 8.360 | -6.4 | -1.6 | -6.8 | 4.8 | -10.0 | C4-H4···O1 | 2.75, 134 |
| | | | | | | | C5—H5···F2 | 2.63, 154 |
V | x, -y, z + 1/2 | 8.524 | -1.3 | -2.3 | -10.0 | 6.8 | -6.9 | H3···H2 | 2.40 |
| | | | | | | | C3—H3···O1 | 2.95, 165 |
VI | x, -y + 1, z + 1/2 | 6.652 | -0.7 | -0.8 | -8.2 | 3.7 | -6.0 | C6—H6···F2 | 2.69, 163 |
| | | | | | | | C6—H6···F3 | 2.94, 124 |
| | | | | | | | C8—F1···F2-C8 | 3.1023, 114, 147 |