short communications
Multiple solutions in data fitting: a trap in
structural analysis and some ideas to avoid itaDepartment of Physics, University of Paris XII, 61 Avenue De Gaulle, 94010 Creteil, France, bDepartment of Chemical Sciences, Via L. Giorgieri 1, 34127 Trieste, Italy, and cSincrotrone Trieste SCpA, Experimental Division, Padriciano 99, 34012 Trieste, Italy
*Correspondence e-mail: vlaic@elettra.trieste.it
A possible source of error on interatomic distance determination in
multishell data analysis is described on the basis of fitting a simulated signal for a cluster of Rh atoms with an interaction of O atoms; a fit of an experimental signal is also presented. The origin of this type of mistake is briefly discussed.Keywords: EXAFS data analysis.
1. Introduction
During the last decade a number of articles have been published in the field of M—O) distances (Martens et al., 1988; Vaarkamp et al., 1993; Purnell et al., 1994; Kawi et al., 1994; Koningsberger & Vaarkamp, 1995; Muñoz-Paez & Koningsberger, 1995; Zhao & Gates, 1996).
applied to catalysis which report exceptionally long metal—oxygen (In all of these papers a series of compounds were studied and normal M—O distances were found (2–2.2 Å), except in some special cases where the determined distances were as long as 2.70 Å. In a few of the cited papers a mixing of the two kinds of M—O distances are refined together; all the fits presented in these papers were made by using the Fourier filtering method with experimental phases and amplitudes extracted from reference samples.
We have found a very curious behaviour in these papers: each time the E0 values are reported and a long M—O distance is found, there is a very important difference in shift of E0 between the shell with the long M—O bond and that with the short one. The difference between the two E0 values is in the range 10–20 eV.
There are other papers where these distances are reported (see, for instance, Miller et al., 1993; Triantafillou & Gates, 1994) but the fitted E0 values are not quoted.
Since this exceptional distance was discussed in terms of chemical properties of the catalytic systems, it is important to address the issue. Some aspects of this problem have already been discussed in , 1992, and references therein) and it was quoted that the above results could not be obtained by any other group working in the same field. However, the question is still open since, up to now, to our knowledge, nobody has proposed a simple explanation of these unusual results.
and catalysis meetings (Joyner, 1990The purpose of this short contribution is to describe as carefully as possible one of the traps that may lead to unrealistic distance and E0 values with apparently good fits. Although one could find this trap trivial and easy to avoid, the fact that some important papers exhibit strange R and E0 values stimulated us to study the issue in order to alert users, especially the new ones.
This problem has also been briefly discussed during the data analysis session of the
IX Conference, Grenoble, in August 1996, where the necessity to obtain more insight into the problem was envisaged.2. Methods and discussion
For this study we have chosen to simulate an
signal due to a cluster of rhodium atoms in which each central Rh atom is surrounded by six Rh neighbours at a distance of 2.7 Å and two O neighbours at a distance of 2.5 Å. formula (Teo, 1981The structural parameters of the simulated curve are listed in Table 1. |fi(k, Ri)| and Φi(k, Ri) were taken from spherical-wave theoretical amplitude and phase functions for the Rh—Rh and Rh—O shells (McKale et al., 1988). The λ(k), was taken to be λ(k) = k/Γ (Teo, 1981) with Γ = 1 Å−2.
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The corresponding signal is shown in Fig. 1(a), together with the single Rh—Rh shell contribution. The Fourier transforms of the signals were calculated in the interval 3–16 Å. Before calculating the Fourier transform, χ(k) data were multiplied by k and a Kaiser–Bessel apodization window (smoothness parameter τ = 2.5). The moduli and imaginary parts of the Fourier transforms are shown in Fig. 1(b).
The oxygen contribution is clearly visible as the shoulder on the left-hand side of the Fourier transform peak. Although this light-atom contribution is not negligible, the signal is largely dominated by Rh.
The fitting procedure was performed on the original theoretical signal (without any Fourier transform or filtering). The original theoretical curve will be called `simulation' (χsim) and the curve fitted with varying parameters will hereafter be called `fitting' (χfit). We used Round Midnight, the fitting program of the EXAFS pour le Mac package (Michalowicz, 1991). The Rh contribution parameters were kept fixed at the initial values while the O parameters (N, σ, R and ΔE0) were allowed to vary. Since the present problem is not directly connected with the statistical analysis of the error bars (the simulation is purely theoretical and free from experimental noise), we used the residual ρ, where
as the `best-fit' criterion.
If the starting point of the fitted parameters is chosen not too far from the theoretical solution, obviously the residual falls directly into the expected true minimum, and its value is exactly at ρ(minimum) = 0. Now, if we choose a starting point sufficiently far from this true solution, two different minima are reached, depending on the chosen starting point. The corresponding values of these fits are listed in Table 2 and the corresponding curves are displayed in Figs. 2(a), 2(b) and Figs. 3(a), 3(b). Although these two fits are obviously worse than the true theoretical solution, they look fairly good `by eye'. The false solution with the long Rh—O distance (R = 2.78 Å) seems better than that with the short Rh—O distance. Both could be accepted as the `true solution' prior to any discussion.
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At this point it is important to understand why it is possible to find several residual minima, including the true one, and also two false solutions which are `not so bad'.
During the fit the value of the E0) was allowed to vary together with the parameters involving oxygen. We recall that this procedure is absolutely necessary while fitting real experimental signals because the experimental E0 must always be corrected. A variation of E0 can be understood as a phase shift of the fitted signal. One should remember that both simulation and fitting are damped sine-wave functions. Obviously the fit is perfect if the phase shift is exactly zero. If this phase shift corresponds to ±2π, again a good match between the simulation and the fitted curves is obtained. The values ±2π correspond exactly to ΔE0 = +20 and −23 eV found in the false fits of Table 2.
(Another way to show the position of these minima is represented by the analysis of the hypersurface ρ(N, σ, R, ΔE0). We show in Fig. 4 the surface ρ(R, ΔE0), where the values of N and σ for the O atoms are kept constant (N = 2, σ = 0.07 Å). In spite of this restriction the resulting figure is very convincing: the three minima described above are evident. Using this figure it is easy to understand that the final result depends on the starting point chosen by the user.
Quite obvious for a theoretical simulation, the `multiple minima' trap can also be observed in true experimental spectra. The following analysis refers to an RhCl3/MgO (4%wt Rh) catalyst. The sample was impregnated, calcined and only partially reduced under hydrogen. The data presented in this paper were collected at the ESRF (GILDA beamline) at the K edge of rhodium. As the reduction was only partial, this sample is a good example of an signal containing Rh—Rh and Rh—O contributions.
We present the unfiltered (a) and its k3χ(k) Fourier transform in Fig. 5(b). Fits on the filtered (1.27–3.00 Å region) spectrum were performed by using experimental phases and amplitudes functions deduced from reference compounds, i.e. metallic Rh foil (for the Rh—Rh contribution) and Rh2O3 powder (for the Rh—O contribution); all the structural parameters (N, R and σ) and ΔE0 were free to vary during the fit.
spectrum in Fig. 5In Figs. 5(c) and 5(d) and in Table 3 we present the results of two different fits of the Rh—Rh and Rh—O contributions. The differences between the two fits lie in the starting values of the Rh—O parameters. Correlations between Rh—Rh and Rh—O fitting parameters are low: while the Rh—O results of the two fits are dramatically different, the Rh—Rh parameters are identical.
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We notice that the Rh—O distance is found to be 2.07 Å or 2.44 Å and the ΔE0 value is 3.7 eV and −18.3 eV, respectively. The variations between the two sets of values are of the same order as those obtained in our simulated spectrum (Table 2) and also very similar to the numbers found in the papers cited in the introduction.
Fig. 6 illustrates why it may be easy to fall into the `false' minimum and why a simple visual inspection of the fits is insufficient to escape from this trap: in this figure we have plotted together the filtered experimental curve, the Rh—O contribution with the short (2.07 Å) distance and the long Rh—O contribution (2.44 Å). It appears clearly that the important difference in distances is almost compensated by the large difference in ΔE0 in the 3–7 Å−1 range. On the other hand, the two Rh—O signals are strongly shifted in the 7–13 Å−1 range, but then these contributions are largely hidden by the strong Rh—Rh signal.
3. Conclusions
We should emphasize that the first part of this analysis was performed on a pure noise-free signal. Moreover, in the theoretical simulation case we have simplified the problem by allowing only the parameters describing one of the two studied shells to vary, and the ρ surface was studied only for two correlated parameters.
For the true experimental signal presented in this work we have obtained the same kind of result: the possibility to fall into a false solution is clear.
Fortunately, it is possible to follow some simple rules in order to avoid this trap.
(i) Even if theoretical phases and amplitudes functions are used in the fitted model, it is necessary to use at least one model compound in order to estimate a reasonable ΔE0 value. In a multishell analysis, different ΔE0 values could be used for each type of scatterer, but this should be tested on a model compound. The use of different ΔE0 for two shells of the same absorber–scatterer pair seems to us a dangerous choice.
(ii) E0 of the unknown compound can be varied, but only in a reasonably limited range, never 15 eV.
(iii) In the case of finding an `exotic' absorber–scatterer distance far from known values obtained from ρ or χ2 surface before claiming that this distance has a chemical meaning.
analysis, it is useful to explore theIn this paper we do not want to discuss if a long metal—oxygen distance could have a chemical meaning. Our opinion is that the energy shift value should be taken as the crucial criterion to decide which fit is chemically reasonable.
We do not suggest that the authors cited in our introduction are systematically wrong, but we think that their results should be reexamined taking into account our remarks.
References
Joyner, R. W. (1990). Faraday Discuss. Chem. Soc. 89, 146.
Joyner, R. W. (1992). Elementary Reaction Steps in Heterogeneous Catalysis, pp. 249–265. Dordrecht: Kluwer.
Kawi, S., Chang, J.-R. & Gates, B. C. (1994). J. Phys. Chem. 98, 12978–12988. CrossRef CAS Web of Science
Koninsberger, D. C. & Vaarkamp, M. (1995). Physica B, 208/209, 633–636.
McKale, A. G., Veal, B. W., Paulikas, A. P., Chan, S.-K. & Knapp, G. S. (1988). J. Am. Chem. Soc. 110, 3763–3768. CrossRef CAS Web of Science
Martens, J. H. A., Prins, R., Zandbergen, H. & Koningsberger, D. C. (1988). J. Phys. Chem. 92, 1903–1916. CrossRef CAS Web of Science
Michalovicz, A. (1991). Logiciels pour la Chimie, pp. 102–112. Paris: Societé Française de Chimie.
Miller, J. T., Meyers, B. L., Modica, F. S., Lane, G. S., Vaarkamp, M. & Koningsberger, D. C. (1993). J. Catal. 143, 395–408. CrossRef CAS Web of Science
Muñoz-Paez, A. & Koningsberger, D. C. (1995). J. Phys. Chem. 99, 4193–4204.
Purnell, S. K., Sanchez, K. M., Patrini, R., Chang, J.-R. & Gates, B. C. (1994). J. Phys. Chem. 98, 1205–1212. CrossRef CAS Web of Science
Teo, B. K. (1981). EXAFS Spectroscopy Techniques and Applications, pp. 17–21. New York: Plenum.
Triantafillou, N. D. & Gates, B. C. (1994). J. Phys. Chem. 98, 8431–8441. CrossRef CAS Web of Science
Vaarkamp, M., Modica, F. S., Miller, J. T. & Koningsberger, D. C. (1993). J. Catal. 144, 611–626. CrossRef CAS Web of Science
Zhao, A. & Gates, B. C. (1996). J. Am. Chem. Soc. 118, 2458–2469. CrossRef CAS Web of Science
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