In the crystal structure of the title compound, C
7H
10N
+·NO
3−, the cations and anions are linked by N—H
O and C—H
O hydrogen bonds to form a supramolecular structure.
Supporting information
CCDC reference: 206700
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.002 Å
- R factor = 0.034
- wR factor = 0.077
- Data-to-parameter ratio = 18.0
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
2,6-Dimethylpyridine and aqueous nitric acid in an equimolar ratio were mixed together. Crystals of (I) formed in the resulting solution by slow evaporation for a month at 293 K.
Atom H1 was located in a difference Fourier map and refined isotropically; all other H atoms were placed in calculated positions and allowed to ride on their parent atoms. A rotating group model was used for the methyl groups.
Data collection: SMART (Bruker, 2000); cell refinement: SMART; data reduction: SAINT-Plus (Bruker, 2000); program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
2,6-Dimethylpyridinium nitrate
top
Crystal data top
C7H10N+·NO3− | F(000) = 720 |
Mr = 170.17 | Dx = 1.294 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 782 reflections |
a = 15.918 (3) Å | θ = 2.8–19.8° |
b = 7.560 (1) Å | µ = 0.10 mm−1 |
c = 15.924 (3) Å | T = 293 K |
β = 114.26 (1)° | Prism, colourless |
V = 1747.1 (5) Å3 | 0.3 × 0.2 × 0.2 mm |
Z = 8 | |
Data collection top
Bruker SMART Apex CCD area-detector diffractometer | 1091 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.032 |
Graphite monochromator | θmax = 28.1°, θmin = 2.8° |
ϕ and ω scans | h = −13→20 |
5170 measured reflections | k = −9→9 |
2069 independent reflections | l = −20→20 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.077 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.86 | w = 1/[σ2(Fo2) + (0.0314P)2] where P = (Fo2 + 2Fc2)/3 |
2069 reflections | (Δ/σ)max < 0.001 |
115 parameters | Δρmax = 0.13 e Å−3 |
0 restraints | Δρmin = −0.07 e Å−3 |
Crystal data top
C7H10N+·NO3− | V = 1747.1 (5) Å3 |
Mr = 170.17 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 15.918 (3) Å | µ = 0.10 mm−1 |
b = 7.560 (1) Å | T = 293 K |
c = 15.924 (3) Å | 0.3 × 0.2 × 0.2 mm |
β = 114.26 (1)° | |
Data collection top
Bruker SMART Apex CCD area-detector diffractometer | 1091 reflections with I > 2σ(I) |
5170 measured reflections | Rint = 0.032 |
2069 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.077 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.86 | Δρmax = 0.13 e Å−3 |
2069 reflections | Δρmin = −0.07 e Å−3 |
115 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.14054 (9) | 0.86336 (16) | 0.06222 (9) | 0.0635 (4) | |
C2 | 0.10556 (10) | 0.87640 (15) | −0.03100 (10) | 0.0690 (4) | |
H2 | 0.0462 | 0.8369 | −0.0668 | 0.083* | |
C3 | 0.15770 (11) | 0.94718 (16) | −0.07153 (10) | 0.0706 (4) | |
H3 | 0.1340 | 0.9546 | −0.1354 | 0.085* | |
C4 | 0.24362 (10) | 1.00723 (16) | −0.02044 (9) | 0.0691 (4) | |
H4 | 0.2786 | 1.0567 | −0.0490 | 0.083* | |
C5 | 0.27894 (10) | 0.99510 (17) | 0.07338 (9) | 0.0656 (4) | |
C6 | 0.09119 (9) | 0.78637 (16) | 0.11475 (9) | 0.0717 (4) | |
H6A | 0.1232 | 0.6827 | 0.1469 | 0.108* | |
H6B | 0.0297 | 0.7549 | 0.0731 | 0.108* | |
H6C | 0.0887 | 0.8717 | 0.1583 | 0.108* | |
C7 | 0.37155 (9) | 1.05641 (16) | 0.13605 (9) | 0.0749 (4) | |
H7A | 0.3660 | 1.1502 | 0.1741 | 0.112* | |
H7B | 0.4037 | 1.0990 | 0.1006 | 0.112* | |
H7C | 0.4053 | 0.9600 | 0.1743 | 0.112* | |
N1 | 0.22590 (8) | 0.92208 (13) | 0.10996 (9) | 0.0617 (3) | |
H1 | 0.2464 (8) | 0.9080 (13) | 0.1664 (9) | 0.057 (4)* | |
N2 | 0.35705 (9) | 0.79802 (14) | 0.33269 (9) | 0.0661 (3) | |
O1 | 0.39264 (6) | 0.78106 (11) | 0.41608 (7) | 0.0760 (3) | |
O2 | 0.39045 (7) | 0.72683 (11) | 0.28549 (6) | 0.0802 (3) | |
O3 | 0.28628 (7) | 0.88737 (11) | 0.29672 (6) | 0.0729 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0610 (9) | 0.0600 (8) | 0.0612 (9) | 0.0070 (7) | 0.0166 (8) | 0.0029 (7) |
C2 | 0.0664 (9) | 0.0640 (8) | 0.0629 (9) | 0.0079 (7) | 0.0127 (8) | 0.0023 (7) |
C3 | 0.0786 (10) | 0.0665 (9) | 0.0571 (9) | 0.0104 (8) | 0.0182 (8) | 0.0044 (7) |
C4 | 0.0764 (10) | 0.0665 (8) | 0.0647 (9) | 0.0078 (8) | 0.0293 (8) | 0.0062 (7) |
C5 | 0.0663 (9) | 0.0640 (8) | 0.0624 (9) | 0.0059 (7) | 0.0223 (8) | 0.0039 (7) |
C6 | 0.0648 (9) | 0.0687 (8) | 0.0753 (9) | 0.0028 (7) | 0.0223 (8) | 0.0064 (7) |
C7 | 0.0674 (9) | 0.0743 (8) | 0.0780 (10) | −0.0011 (7) | 0.0248 (8) | 0.0022 (7) |
N1 | 0.0641 (8) | 0.0625 (7) | 0.0519 (8) | 0.0067 (6) | 0.0173 (7) | 0.0051 (6) |
N2 | 0.0666 (8) | 0.0660 (7) | 0.0594 (8) | 0.0063 (6) | 0.0194 (7) | 0.0019 (6) |
O1 | 0.0736 (6) | 0.0838 (6) | 0.0596 (6) | 0.0138 (5) | 0.0163 (5) | 0.0065 (5) |
O2 | 0.0859 (7) | 0.0813 (6) | 0.0692 (6) | 0.0182 (5) | 0.0277 (6) | 0.0012 (5) |
O3 | 0.0694 (6) | 0.0796 (6) | 0.0611 (6) | 0.0153 (5) | 0.0181 (5) | 0.0045 (4) |
Geometric parameters (Å, º) top
C1—N1 | 1.3313 (16) | C6—H6A | 0.96 |
C1—C2 | 1.3581 (17) | C6—H6B | 0.96 |
C1—C6 | 1.4817 (18) | C6—H6C | 0.96 |
C2—C3 | 1.3534 (19) | C7—H7A | 0.96 |
C2—H2 | 0.93 | C7—H7B | 0.96 |
C3—C4 | 1.3506 (18) | C7—H7C | 0.96 |
C3—H3 | 0.93 | N1—H1 | 0.827 (12) |
C4—C5 | 1.3661 (17) | N2—O2 | 1.2107 (13) |
C4—H4 | 0.93 | N2—O1 | 1.2176 (12) |
C5—N1 | 1.3271 (16) | N2—O3 | 1.2342 (13) |
C5—C7 | 1.4747 (17) | | |
| | | |
N1—C1—C2 | 117.63 (14) | H6A—C6—H6B | 109.5 |
N1—C1—C6 | 117.52 (12) | C1—C6—H6C | 109.5 |
C2—C1—C6 | 124.84 (13) | H6A—C6—H6C | 109.5 |
C3—C2—C1 | 119.58 (14) | H6B—C6—H6C | 109.5 |
C3—C2—H2 | 120.2 | C5—C7—H7A | 109.5 |
C1—C2—H2 | 120.2 | C5—C7—H7B | 109.5 |
C4—C3—C2 | 120.88 (14) | H7A—C7—H7B | 109.5 |
C4—C3—H3 | 119.6 | C5—C7—H7C | 109.5 |
C2—C3—H3 | 119.6 | H7A—C7—H7C | 109.5 |
C3—C4—C5 | 119.74 (15) | H7B—C7—H7C | 109.5 |
C3—C4—H4 | 120.1 | C5—N1—C1 | 124.90 (13) |
C5—C4—H4 | 120.1 | C5—N1—H1 | 119.5 (8) |
N1—C5—C4 | 117.24 (14) | C1—N1—H1 | 115.6 (8) |
N1—C5—C7 | 118.23 (12) | O2—N2—O1 | 120.26 (12) |
C4—C5—C7 | 124.53 (14) | O2—N2—O3 | 120.34 (12) |
C1—C6—H6A | 109.5 | O1—N2—O3 | 119.39 (12) |
C1—C6—H6B | 109.5 | | |
| | | |
N1—C1—C2—C3 | 0.06 (18) | C3—C4—C5—C7 | −179.86 (12) |
C6—C1—C2—C3 | −179.07 (11) | C4—C5—N1—C1 | −1.42 (18) |
C1—C2—C3—C4 | −0.90 (19) | C7—C5—N1—C1 | 178.91 (11) |
C2—C3—C4—C5 | 0.62 (19) | C2—C1—N1—C5 | 1.15 (19) |
C3—C4—C5—N1 | 0.50 (18) | C6—C1—N1—C5 | −179.66 (11) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3 | 0.827 (12) | 1.912 (13) | 2.7364 (17) | 175.5 (11) |
C2—H2···O1i | 0.93 | 2.51 | 3.3567 (19) | 152 |
C4—H4···O1ii | 0.93 | 2.44 | 3.3438 (18) | 165 |
C4—H4···O3ii | 0.93 | 2.54 | 3.3463 (18) | 145 |
C6—H6B···O1i | 0.96 | 2.57 | 3.4700 (17) | 156 |
C7—H7C···O2 | 0.96 | 2.58 | 3.3723 (16) | 140 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x, −y+2, z−1/2. |
Experimental details
Crystal data |
Chemical formula | C7H10N+·NO3− |
Mr | 170.17 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 15.918 (3), 7.560 (1), 15.924 (3) |
β (°) | 114.26 (1) |
V (Å3) | 1747.1 (5) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.3 × 0.2 × 0.2 |
|
Data collection |
Diffractometer | Bruker SMART Apex CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5170, 2069, 1091 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.662 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.077, 0.86 |
No. of reflections | 2069 |
No. of parameters | 115 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.13, −0.07 |
Selected geometric parameters (Å, º) topC1—N1 | 1.3313 (16) | C5—N1 | 1.3271 (16) |
C1—C2 | 1.3581 (17) | C5—C7 | 1.4747 (17) |
C1—C6 | 1.4817 (18) | N2—O2 | 1.2107 (13) |
C2—C3 | 1.3534 (19) | N2—O1 | 1.2176 (12) |
C3—C4 | 1.3506 (18) | N2—O3 | 1.2342 (13) |
C4—C5 | 1.3661 (17) | | |
| | | |
N1—C1—C2 | 117.63 (14) | N1—C5—C7 | 118.23 (12) |
N1—C1—C6 | 117.52 (12) | C4—C5—C7 | 124.53 (14) |
C2—C1—C6 | 124.84 (13) | C5—N1—C1 | 124.90 (13) |
N1—C5—C4 | 117.24 (14) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3 | 0.827 (12) | 1.912 (13) | 2.7364 (17) | 175.5 (11) |
C2—H2···O1i | 0.93 | 2.51 | 3.3567 (19) | 152 |
C4—H4···O1ii | 0.93 | 2.44 | 3.3438 (18) | 165 |
C4—H4···O3ii | 0.93 | 2.54 | 3.3463 (18) | 145 |
C6—H6B···O1i | 0.96 | 2.57 | 3.4700 (17) | 156 |
C7—H7C···O2 | 0.96 | 2.58 | 3.3723 (16) | 140 |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x, −y+2, z−1/2. |
Crystal structures of a few 2,6-dimethylpyridinium complexes have been reported previously (Jin et al., 2000; Pan et al. 2001). We report here the structure of the title salt, (I), obtained from 2,6-dimethylpyridine and nitric acid.
The asymmetric unit of (I), consists of one 2,6-dimethylpyridinium cation and one nitrate anion linked by N1—H1···O3 hydrogen bond and C7—H7CO2 interaction (Fig.1 & Table 2). In the crystal, the cations and anions are linked by a number of C—H···O interactions to form a network structure. A part of the network around a nitrate anion is shown in Fig. 2. In the network, the nitrate anion is arranged nearly parallel to two symmetry related cations [dihedral angle 12.33 (6)°] but it is inclined to the other cation (N1/C1—C7) with a dihedral angle of 60.42 (3)°. The network is further stabilized by π–π-stacking interactions involving pyridinium rings at (x, y, z) and (1/2 − x, 3/2 − y, −z), respectively, with a centroid–centroid separation of 3.558 (1) Å.
The bond lengths in (I) have normal values. In comparison with pyridine, the C—N—C angle in the pyridinium ring is always widened. For example, the C—N—C angle in 2,6-dimethylpyridine (Bond et al., 2001) is 119.0 (3)°, and 120° in its 1:1 complex with urea (Lee & Wallwork, 1965). In the 1:1 complex of 4-methylpyridine and pentachlorophenol, which has been crystallized as a salt at 80 K and a neutral adduct at 295 K, the C—N—C angles are 119.9 (2) and 118.0 (4)°, respectively (Malarski et al., 1987, 1996). In the salts of 2,6-dimethylpyridinium hydrogen phthalate and 2,6-dimethylpyridinium fumarate (Jin et al. 2000; Pan et al., 2001), this angle is widened to 123.83 (2) and 123.92 (17)°, respectively. Similar feature is also observed in the title salt, with a C1—N1—C5 angle of 124.90 (13)°.