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Acta Cryst. (2004). E60, o216-o218 [ doi:10.1107/S1600536804000145 ]
(R,R)-(-)-trans-1,4-Dioxaspiro[4,4]nonane-2,3-diylbis(diphenylmethanol)-N-allyl-N-propyl-3-oxocyclohexene-1-carboxamide (2/1)
S. Ohba and H. Miyamoto
Online 17 January 2004
Key indicators
- Single-crystal X-ray study
- T = 248 K
- Mean
(C-C) = 0.013 Å
- R factor = 0.077
- wR factor = 0.222
- Data-to-parameter ratio = 7.0
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT022_ALERT_3_A Ratio Unique / Expected Reflections too Low .... 0.81
| Author Response: see publ_section_exptl_refinement.
|
PLAT027_ALERT_3_A _diffrn_reflns_theta_full (too) Low ............ 60.00 Deg.
| Author Response: see publ_section_exptl_refinement.
|
PLAT201_ALERT_2_A Isotropic non-H Atoms in Main Residue(s) ..... = 12
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_A Check High U(eq) as Compared to Neighbors .... C56
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_A Check High U(eq) as Compared to Neighbors .... C34
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_A Check High U(eq) as Compared to Neighbors .... C38
| Author Response: see publ_section_exptl_refinement.
|
Alert level B
PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.66 Ratio
PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 4.34 Ratio
PLAT222_ALERT_3_B Large Non-Solvent H Ueq(max)/Ueq(min) ... 4.06 Ratio
PLAT222_ALERT_3_B Large Non-Solvent H Ueq(max)/Ueq(min) ... 4.43 Ratio
PLAT241_ALERT_2_B Check High U(eq) as Compared to Neighbors .... C55
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_B Check High U(eq) as Compared to Neighbors .... C78
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_B Check High U(eq) as Compared to Neighbors .... C122
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_B Check High U(eq) as Compared to Neighbors .... C145
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_B Check High U(eq) as Compared to Neighbors .... C25
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_B Check High U(eq) as Compared to Neighbors .... C44
| Author Response: see publ_section_exptl_refinement.
|
PLAT242_ALERT_2_B Check Low U(eq) as Compared to Neighbors .... C54
PLAT242_ALERT_2_B Check Low U(eq) as Compared to Neighbors .... C57
PLAT242_ALERT_2_B Check Low U(eq) as Compared to Neighbors .... C31
PLAT242_ALERT_2_B Check Low U(eq) as Compared to Neighbors .... C39
PLAT340_ALERT_3_B Low Bond Precision on C-C bonds (x 1000) Ang ... 13
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT063_ALERT_3_C Crystal Probably too Large for Beam Size ....... 0.68 mm
| Author Response: The X-ray beam was generated by rotating anode with a normal
filament, and monochromated by a graphite plate. The diameter
of the collimator used was 1.0 mm. I think that the homogenious
region of the X-ray beam is 0.8 mm phai. The longest dimension
of the needle crystal of 0.68x0.30x0.20 mm is 0.77 mm.
|
PLAT089_ALERT_3_C Poor Data / Parameter Ratio (Zmax .LT. 18) ..... 7.02
PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ?
PLAT155_ALERT_4_C The Triclinic Unitcell is NOT Reduced .......... ?
| Author Response: This is a deficiency in the WinAFC Diffractometer Control Software
(Rigaku, 1999).
|
PLAT156_ALERT_4_C Axial System Input Cell not Standard ........... ?
| Author Response: This is a deficiency in the WinAFC Diffractometer Control Software
(Rigaku, 1999).
|
PLAT213_ALERT_2_C Atom C56 has ADP max/min Ratio ............. 3.50 prolat
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.04 Ratio
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.20 Ratio
PLAT230_ALERT_2_C Hirshfeld Test Diff for C79 - C80 = 5.03 su
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C79
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C107
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C132
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C146
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C173
| Author Response: see publ_section_exptl_refinement.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C46
| Author Response: see publ_section_exptl_refinement.
|
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C53
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C76
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C142
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C23
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C29
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C33
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... N22
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C36
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C42
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C47
PLAT360_ALERT_2_C Short C(sp3)-C(sp3) Bond C37 - C38 = 1.41 Ang.
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1
C33 H32 O4
| Author Response: The positions of the molecules are selected to form assemblies
of host...guest...host in an asymmetric unit.
|
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3
C33 H32 O4
| Author Response: The positions of the molecules are selected to form assemblies
of host...guest...host in an asymmetric unit.
|
Alert level G
REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is
correct. If it is not, please give the correct count in the
_publ_section_exptl_refinement section of the submitted CIF.
From the CIF: _diffrn_reflns_theta_max 75.00
From the CIF: _reflns_number_total 11148
Count of symmetry unique reflns 13780
Completeness (_total/calc) 80.90%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 0
Fraction of Friedel pairs measured 0.000
Are heavy atom types Z>Si present no
6 ALERT level A = In general: serious problem
15 ALERT level B = Potentially serious problem
29 ALERT level C = Check and explain
1 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
37 ALERT type 2 Indicator that the structure model may be wrong or deficient
7 ALERT type 3 Indicator that the structure quality may be low
6 ALERT type 4 Improvement, methodology, query or suggestion
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