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Acta Cryst. (2004). E60, o647-o650 [ doi:10.1107/S1600536804006518 ]
L-Leucyl-L-isoleucine 0.75 hydrate
C. H. Görbitz
Online 27 March 2004
Key indicators
- Single-crystal X-ray study
- T = 105 K
- Mean
(C-C) = 0.007 Å
- Disorder in solvent or counterion
- R factor = 0.053
- wR factor = 0.139
- Data-to-parameter ratio = 10.4
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT201_ALERT_2_A Isotropic non-H Atoms in Main Residue(s) ....... 16
| Author Response: These are disordered C atoms with occupancy < 0.7 for
which an anisotropic refinement was not permissable. The
reflections-to-parameters ratio is also quite low already
and should not be impaired by adding further thermal parameters.
|
PLAT220_ALERT_2_A Large Non-Solvent C Ueq(max)/Ueq(min) ... 5.18 Ratio
| Author Response: Some terminal C atoms in disordered side chains have high
isotropic U-values, see Fig. 1.
|
PLAT222_ALERT_3_A Large Non-Solvent H Ueq(max)/Ueq(min) ... 6.00 Ratio
| Author Response: Same as above for H atoms.
|
PLAT305_ALERT_2_A Isolated Hydrogen Atom (Outside Bond Range ??) >H12D
| Author Response: Checking error, the C10D-H12D distance is fixed to 0.98 Ang.
|
PLAT432_ALERT_2_A Short Inter X...Y Contact C9D .. C20C .. 2.79 Ang.
| Author Response: Both atoms belong to disordered side chains.
|
PLAT432_ALERT_2_A Short Inter X...Y Contact C10D .. C20C .. 1.98 Ang.
| Author Response: Both atoms belong to disordered side chains.
|
Alert level B
PLAT063_ALERT_3_B Crystal Probably too Large for Beam Size ....... 0.95 mm
| Author Response: This is no problem for a light atom structure, see Gorbitz, Acta
Cryst. B55 (1999) 1090-98.
|
PLAT222_ALERT_3_B Large Non-Solvent H Ueq(max)/Ueq(min) ... 4.11 Ratio
| Author Response: Same as above for H atoms.
|
PLAT222_ALERT_3_B Large Non-Solvent H Ueq(max)/Ueq(min) ... 4.30 Ratio
| Author Response: Same as above for H atoms.
|
PLAT301_ALERT_3_B Main Residue Disorder ......................... 29.00 Perc.
PLAT432_ALERT_2_B Short Inter X...Y Contact C10B .. C35B .. 2.90 Ang.
| Author Response: Both atoms belong to disordered side chains.
|
Alert level C
ABSTM02_ALERT_3_C The ratio of expected to reported Tmax/Tmin(RR') is < 0.90
Tmin and Tmax reported: 0.822 0.992
Tmin' and Tmax expected: 0.924 0.992
RR' = 0.890
Please check that your absorption correction is appropriate.
PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ?
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............ 0.25 Ratio
PLAT061_ALERT_3_C Tmax/Tmin Range Test RR' too Large ............. 0.89
PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... ?
PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ?
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.25 Ratio
| Author Response: Some terminal C atoms in disordered side chains have high
isotropic U-values, see Fig. 1.
|
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.42 Ratio
| Author Response: Some terminal C atoms in disordered side chains have high
isotropic U-values, see Fig. 1.
|
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.02 Ratio
| Author Response: Some terminal C atoms in disordered side chains have high
isotropic U-values, see Fig. 1.
|
PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.72 Ratio
| Author Response: Same as above for H atoms.
|
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C29A
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.13
PLAT302_ALERT_4_C Anion/Solvent Disorder ......................... 1.00 Perc.
PLAT311_ALERT_2_C Isolated Disordered Oxygen Atom (No H's ?) ..... <O1H
PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 7
PLAT417_ALERT_2_C Short Inter D-H..H-D H1C .. H2G .. 2.13 Ang.
PLAT417_ALERT_2_C Short Inter D-H..H-D H2E .. H4A .. 2.10 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact C4A .. O1H .. 2.93 Ang.
| Author Response: Both atoms belong to disordered side chains.
|
PLAT433_ALERT_4_C Short Inter X...Y Contact C34D .. C35D .. 2.78 Ang.
PLAT721_ALERT_1_C Bond Calc 0.99102, Rep 0.98000 Dev... 0.01 Ang.
C35D -H55D 1.555 1.555
PLAT722_ALERT_1_C Angle Calc 108.42, Rep 109.50 Dev... 1.08 Deg.
C33D -C35D -H55D 1.555 1.555 1.555
PLAT722_ALERT_1_C Angle Calc 110.73, Rep 109.50 Dev... 1.23 Deg.
H54D -C35D -H56D 1.555 1.555 1.555
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3
C12 H23.50 N2 O3
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 8
O
Alert level G
CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected.
CELLZ01_ALERT_1_G ALERT: check formula stoichiometry or atom site occupancies.
From the CIF: _cell_formula_units_Z 24
From the CIF: _chemical_formula_sum C12 H25.50 N2 O3.76
TEST: Compare cell contents of formula and atom_site data
atom Z*formula cif sites diff
C 288.00 288.06 -0.06
H 612.00 612.12 -0.12
N 48.00 48.00 0.00
O 90.24 90.28 -0.04
REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is
correct. If it is not, please give the correct count in the
_publ_section_exptl_refinement section of the submitted CIF.
From the CIF: _diffrn_reflns_theta_max 27.10
From the CIF: _reflns_number_total 7027
Count of symmetry unique reflns 7057
Completeness (_total/calc) 99.57%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 0
Fraction of Friedel pairs measured 0.000
Are heavy atom types Z>Si present no
6 ALERT level A = In general: serious problem
5 ALERT level B = Potentially serious problem
25 ALERT level C = Check and explain
3 ALERT level G = General alerts; check
9 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
15 ALERT type 2 Indicator that the structure model may be wrong or deficient
9 ALERT type 3 Indicator that the structure quality may be low
6 ALERT type 4 Improvement, methodology, query or suggestion
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