Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805030503/rz6121sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536805030503/rz6121Isup2.hkl |
CCDC reference: 287703
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (C-C) = 0.002 Å
- R factor = 0.031
- wR factor = 0.087
- Data-to-parameter ratio = 14.1
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT230_ALERT_2_C Hirshfeld Test Diff for S1 - C5 .. 5.68 su
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion
A mixture of 4-amino-3-(1,2,4-triazol-1-yl)-1H-1,2,4-triazole-5(4H)-thione (0.02 mol) and 2-hydroxybenzaldehyde (0.02 mol) were refluxed at 391 K for 15–20 min in glacial acetic acid. The mixture was then filtered and crystallized from ethanol to afford the title compound (5.7 g, yield 95%). Single crystals suitable for X-ray measurements were obtained by recrystallization from ethanol at room temperature.
H atoms bonded to C atoms were placed in calculated positions and constrained to ride on their parent atoms (C—H = 0.93–0.96 Å) with Uiso(H) = 1.2Ueq(C). The positions and isotropic displacement parameters of the H atoms attached to the N and O atoms were refined freely.
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1999); software used to prepare material for publication: SHELXTL.
C12H11N7OS | F(000) = 624 |
Mr = 301.34 | Dx = 1.470 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4407 reflections |
a = 8.3335 (9) Å | θ = 2.9–26.4° |
b = 14.9777 (16) Å | µ = 0.25 mm−1 |
c = 11.4724 (12) Å | T = 294 K |
β = 107.990 (2)° | Block, yellow |
V = 1361.9 (3) Å3 | 0.24 × 0.22 × 0.20 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 2794 independent reflections |
Radiation source: fine-focus sealed tube | 2360 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
ϕ and ω scans | θmax = 26.4°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −10→7 |
Tmin = 0.941, Tmax = 0.951 | k = −16→18 |
7581 measured reflections | l = −14→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.087 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0406P)2 + 0.4772P] where P = (Fo2 + 2Fc2)/3 |
2794 reflections | (Δ/σ)max = 0.001 |
198 parameters | Δρmax = 0.19 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C12H11N7OS | V = 1361.9 (3) Å3 |
Mr = 301.34 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.3335 (9) Å | µ = 0.25 mm−1 |
b = 14.9777 (16) Å | T = 294 K |
c = 11.4724 (12) Å | 0.24 × 0.22 × 0.20 mm |
β = 107.990 (2)° |
Bruker SMART CCD area-detector diffractometer | 2794 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2360 reflections with I > 2σ(I) |
Tmin = 0.941, Tmax = 0.951 | Rint = 0.019 |
7581 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 0 restraints |
wR(F2) = 0.087 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.19 e Å−3 |
2794 reflections | Δρmin = −0.20 e Å−3 |
198 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.24099 (6) | 0.05342 (3) | 1.03693 (4) | 0.04496 (14) | |
O1 | −0.04626 (15) | 0.37581 (7) | 0.80700 (11) | 0.0442 (3) | |
H1 | 0.013 (3) | 0.3616 (14) | 0.878 (2) | 0.063 (6)* | |
N1 | 0.40905 (17) | 0.53058 (9) | 1.13906 (13) | 0.0434 (3) | |
N2 | 0.22775 (15) | 0.43147 (8) | 1.15774 (11) | 0.0314 (3) | |
N3 | 0.18802 (17) | 0.44585 (9) | 1.03499 (12) | 0.0381 (3) | |
N4 | 0.30746 (17) | 0.23425 (8) | 1.29213 (11) | 0.0360 (3) | |
N5 | 0.33087 (17) | 0.15302 (9) | 1.24430 (12) | 0.0367 (3) | |
H5 | 0.406 (2) | 0.1151 (13) | 1.2895 (18) | 0.054 (6)* | |
N6 | 0.14833 (15) | 0.22013 (8) | 1.10029 (10) | 0.0295 (3) | |
N7 | 0.04316 (15) | 0.25335 (8) | 0.98900 (11) | 0.0316 (3) | |
C1 | 0.2999 (2) | 0.50609 (11) | 1.02949 (15) | 0.0418 (4) | |
H1A | 0.3039 | 0.5302 | 0.9557 | 0.050* | |
C2 | 0.3588 (2) | 0.48184 (11) | 1.21707 (15) | 0.0390 (4) | |
H2 | 0.4081 | 0.4826 | 1.3017 | 0.047* | |
C3 | 0.13501 (19) | 0.36690 (10) | 1.20714 (14) | 0.0341 (3) | |
H3A | 0.0162 | 0.3698 | 1.1606 | 0.041* | |
H3B | 0.1465 | 0.3822 | 1.2915 | 0.041* | |
C4 | 0.19761 (18) | 0.27407 (10) | 1.20221 (12) | 0.0302 (3) | |
C5 | 0.23881 (18) | 0.14125 (9) | 1.12697 (13) | 0.0315 (3) | |
C6 | −0.06507 (18) | 0.19935 (10) | 0.92130 (13) | 0.0309 (3) | |
H6 | −0.0729 | 0.1412 | 0.9475 | 0.037* | |
C7 | −0.17580 (18) | 0.22927 (10) | 0.80306 (13) | 0.0303 (3) | |
C8 | −0.3023 (2) | 0.17068 (11) | 0.73623 (15) | 0.0388 (4) | |
H8 | −0.3132 | 0.1151 | 0.7692 | 0.047* | |
C9 | −0.4106 (2) | 0.19364 (12) | 0.62293 (15) | 0.0440 (4) | |
H9 | −0.4949 | 0.1544 | 0.5806 | 0.053* | |
C10 | −0.3927 (2) | 0.27575 (12) | 0.57264 (14) | 0.0446 (4) | |
H10 | −0.4645 | 0.2912 | 0.4957 | 0.054* | |
C11 | −0.2693 (2) | 0.33477 (11) | 0.63586 (14) | 0.0404 (4) | |
H11 | −0.2583 | 0.3895 | 0.6008 | 0.048* | |
C12 | −0.16075 (18) | 0.31324 (10) | 0.75192 (13) | 0.0320 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0579 (3) | 0.0314 (2) | 0.0392 (2) | 0.00696 (18) | 0.00580 (19) | −0.00365 (16) |
O1 | 0.0484 (7) | 0.0350 (6) | 0.0379 (6) | −0.0072 (5) | −0.0032 (5) | 0.0051 (5) |
N1 | 0.0392 (7) | 0.0385 (7) | 0.0485 (8) | −0.0093 (6) | 0.0075 (6) | −0.0053 (6) |
N2 | 0.0317 (6) | 0.0282 (6) | 0.0313 (6) | 0.0002 (5) | 0.0054 (5) | −0.0035 (5) |
N3 | 0.0370 (7) | 0.0384 (7) | 0.0329 (7) | −0.0048 (6) | 0.0019 (5) | 0.0027 (5) |
N4 | 0.0370 (7) | 0.0367 (7) | 0.0299 (6) | 0.0008 (5) | 0.0037 (5) | −0.0008 (5) |
N5 | 0.0368 (7) | 0.0353 (7) | 0.0314 (7) | 0.0059 (6) | 0.0007 (6) | 0.0029 (5) |
N6 | 0.0310 (6) | 0.0277 (6) | 0.0257 (6) | 0.0004 (5) | 0.0027 (5) | 0.0013 (5) |
N7 | 0.0331 (6) | 0.0296 (6) | 0.0263 (6) | 0.0016 (5) | 0.0006 (5) | 0.0031 (5) |
C1 | 0.0413 (9) | 0.0390 (9) | 0.0413 (9) | −0.0050 (7) | 0.0072 (7) | 0.0052 (7) |
C2 | 0.0376 (8) | 0.0373 (8) | 0.0368 (8) | −0.0027 (7) | 0.0037 (7) | −0.0092 (7) |
C3 | 0.0351 (8) | 0.0345 (8) | 0.0333 (7) | −0.0005 (6) | 0.0117 (6) | −0.0031 (6) |
C4 | 0.0299 (7) | 0.0323 (7) | 0.0266 (7) | −0.0033 (6) | 0.0062 (6) | −0.0008 (5) |
C5 | 0.0314 (7) | 0.0297 (7) | 0.0305 (7) | 0.0015 (6) | 0.0052 (6) | 0.0041 (6) |
C6 | 0.0306 (7) | 0.0293 (7) | 0.0318 (7) | 0.0000 (6) | 0.0082 (6) | 0.0011 (6) |
C7 | 0.0278 (7) | 0.0331 (7) | 0.0282 (7) | 0.0023 (6) | 0.0060 (6) | −0.0026 (6) |
C8 | 0.0344 (8) | 0.0384 (8) | 0.0400 (8) | −0.0030 (6) | 0.0065 (7) | −0.0051 (7) |
C9 | 0.0331 (8) | 0.0510 (10) | 0.0400 (9) | −0.0027 (7) | −0.0003 (7) | −0.0128 (7) |
C10 | 0.0387 (9) | 0.0581 (11) | 0.0277 (8) | 0.0116 (8) | −0.0034 (7) | −0.0046 (7) |
C11 | 0.0461 (9) | 0.0390 (8) | 0.0323 (8) | 0.0080 (7) | 0.0066 (7) | 0.0042 (6) |
C12 | 0.0299 (7) | 0.0339 (8) | 0.0297 (7) | 0.0028 (6) | 0.0054 (6) | −0.0033 (6) |
S1—C5 | 1.6762 (15) | C1—H1A | 0.9300 |
O1—C12 | 1.3474 (18) | C2—H2 | 0.9300 |
O1—H1 | 0.83 (2) | C3—C4 | 1.492 (2) |
N1—C2 | 1.320 (2) | C3—H3A | 0.9700 |
N1—C1 | 1.355 (2) | C3—H3B | 0.9700 |
N2—C2 | 1.329 (2) | C6—C7 | 1.456 (2) |
N2—N3 | 1.3606 (17) | C6—H6 | 0.9300 |
N2—C3 | 1.4575 (19) | C7—C8 | 1.403 (2) |
N3—C1 | 1.313 (2) | C7—C12 | 1.410 (2) |
N4—C4 | 1.2941 (19) | C8—C9 | 1.378 (2) |
N4—N5 | 1.3730 (18) | C8—H8 | 0.9300 |
N5—C5 | 1.3392 (19) | C9—C10 | 1.386 (3) |
N5—H5 | 0.89 (2) | C9—H9 | 0.9300 |
N6—C4 | 1.3755 (18) | C10—C11 | 1.380 (2) |
N6—C5 | 1.3839 (18) | C10—H10 | 0.9300 |
N6—N7 | 1.3981 (16) | C11—C12 | 1.397 (2) |
N7—C6 | 1.2799 (18) | C11—H11 | 0.9300 |
C12—O1—H1 | 113.4 (15) | N4—C4—C3 | 124.66 (13) |
C2—N1—C1 | 102.49 (13) | N6—C4—C3 | 124.29 (12) |
C2—N2—N3 | 109.82 (13) | N5—C5—N6 | 102.35 (12) |
C2—N2—C3 | 128.91 (13) | N5—C5—S1 | 127.65 (11) |
N3—N2—C3 | 121.25 (12) | N6—C5—S1 | 129.98 (11) |
C1—N3—N2 | 102.07 (12) | N7—C6—C7 | 119.74 (13) |
C4—N4—N5 | 104.04 (12) | N7—C6—H6 | 120.1 |
C5—N5—N4 | 114.22 (12) | C7—C6—H6 | 120.1 |
C5—N5—H5 | 125.9 (13) | C8—C7—C12 | 118.61 (13) |
N4—N5—H5 | 119.8 (13) | C8—C7—C6 | 118.01 (13) |
C4—N6—C5 | 108.31 (11) | C12—C7—C6 | 123.38 (13) |
C4—N6—N7 | 120.37 (11) | C9—C8—C7 | 121.47 (15) |
C5—N6—N7 | 130.61 (12) | C9—C8—H8 | 119.3 |
C6—N7—N6 | 117.05 (12) | C7—C8—H8 | 119.3 |
N3—C1—N1 | 115.14 (15) | C8—C9—C10 | 119.41 (15) |
N3—C1—H1A | 122.4 | C8—C9—H9 | 120.3 |
N1—C1—H1A | 122.4 | C10—C9—H9 | 120.3 |
N1—C2—N2 | 110.46 (14) | C11—C10—C9 | 120.53 (15) |
N1—C2—H2 | 124.8 | C11—C10—H10 | 119.7 |
N2—C2—H2 | 124.8 | C9—C10—H10 | 119.7 |
N2—C3—C4 | 111.71 (12) | C10—C11—C12 | 120.75 (15) |
N2—C3—H3A | 109.3 | C10—C11—H11 | 119.6 |
C4—C3—H3A | 109.3 | C12—C11—H11 | 119.6 |
N2—C3—H3B | 109.3 | O1—C12—C11 | 116.29 (14) |
C4—C3—H3B | 109.3 | O1—C12—C7 | 124.50 (13) |
H3A—C3—H3B | 107.9 | C11—C12—C7 | 119.21 (14) |
N4—C4—N6 | 111.03 (13) | ||
C2—N2—N3—C1 | −0.66 (16) | N4—N5—C5—N6 | −1.39 (17) |
C3—N2—N3—C1 | −179.13 (13) | N4—N5—C5—S1 | 176.86 (11) |
C4—N4—N5—C5 | 0.11 (18) | C4—N6—C5—N5 | 2.08 (15) |
C4—N6—N7—C6 | −144.62 (14) | N7—N6—C5—N5 | 172.20 (14) |
C5—N6—N7—C6 | 46.3 (2) | C4—N6—C5—S1 | −176.11 (12) |
N2—N3—C1—N1 | 0.68 (19) | N7—N6—C5—S1 | −6.0 (2) |
C2—N1—C1—N3 | −0.4 (2) | N6—N7—C6—C7 | −178.65 (12) |
C1—N1—C2—N2 | −0.02 (18) | N7—C6—C7—C8 | −174.66 (14) |
N3—N2—C2—N1 | 0.44 (18) | N7—C6—C7—C12 | 6.3 (2) |
C3—N2—C2—N1 | 178.76 (13) | C12—C7—C8—C9 | 0.0 (2) |
C2—N2—C3—C4 | −95.93 (17) | C6—C7—C8—C9 | −179.13 (14) |
N3—N2—C3—C4 | 82.22 (16) | C7—C8—C9—C10 | 1.1 (2) |
N5—N4—C4—N6 | 1.29 (16) | C8—C9—C10—C11 | −0.9 (3) |
N5—N4—C4—C3 | −177.52 (13) | C9—C10—C11—C12 | −0.4 (3) |
C5—N6—C4—N4 | −2.22 (17) | C10—C11—C12—O1 | −178.99 (15) |
N7—N6—C4—N4 | −173.54 (13) | C10—C11—C12—C7 | 1.5 (2) |
C5—N6—C4—C3 | 176.59 (13) | C8—C7—C12—O1 | 179.25 (14) |
N7—N6—C4—C3 | 5.3 (2) | C6—C7—C12—O1 | −1.7 (2) |
N2—C3—C4—N4 | 95.70 (17) | C8—C7—C12—C11 | −1.3 (2) |
N2—C3—C4—N6 | −82.95 (17) | C6—C7—C12—C11 | 177.78 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5···N1i | 0.89 (2) | 1.97 (2) | 2.8389 (19) | 168.2 (18) |
O1—H1···N3 | 0.83 (2) | 2.32 (2) | 2.9324 (17) | 131.1 (19) |
O1—H1···N7 | 0.83 (2) | 2.03 (2) | 2.7051 (17) | 137 (2) |
C3—H3B···S1ii | 0.97 | 2.85 | 3.8020 (16) | 168 |
C6—H6···S1 | 0.93 | 2.82 | 3.3094 (15) | 114 |
Symmetry codes: (i) −x+1, y−1/2, −z+5/2; (ii) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C12H11N7OS |
Mr | 301.34 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 294 |
a, b, c (Å) | 8.3335 (9), 14.9777 (16), 11.4724 (12) |
β (°) | 107.990 (2) |
V (Å3) | 1361.9 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.25 |
Crystal size (mm) | 0.24 × 0.22 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.941, 0.951 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7581, 2794, 2360 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.626 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.087, 1.03 |
No. of reflections | 2794 |
No. of parameters | 198 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.19, −0.20 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1999), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1999), SHELXTL.
S1—C5 | 1.6762 (15) | N5—C5 | 1.3392 (19) |
N4—C4 | 1.2941 (19) | N6—N7 | 1.3981 (16) |
N4—N5 | 1.3730 (18) | N7—C6 | 1.2799 (18) |
C6—N7—N6 | 117.05 (12) | N2—C3—C4 | 111.71 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5···N1i | 0.89 (2) | 1.97 (2) | 2.8389 (19) | 168.2 (18) |
O1—H1···N3 | 0.83 (2) | 2.32 (2) | 2.9324 (17) | 131.1 (19) |
O1—H1···N7 | 0.83 (2) | 2.03 (2) | 2.7051 (17) | 137 (2) |
C3—H3B···S1ii | 0.97 | 2.85 | 3.8020 (16) | 168 |
C6—H6···S1 | 0.93 | 2.82 | 3.3094 (15) | 114 |
Symmetry codes: (i) −x+1, y−1/2, −z+5/2; (ii) x, −y+1/2, z+1/2. |
Recently, compounds containing the 1H-1,2,4-triazole group have attracted much interest because compounds containing a triazole ring system are well known as effcient fungicides in pesticides, and have good plant-growth regulatory activity for a wide variety of crops (Xu et al., 2002). In addition, amine- and thione-substituted triazoles have been studied as anti-inflammatory and antimicrobial agents (Eweiss et al., 1986; Awad et al., 1991). In a search for new triazole compounds with better biological activity, the title compound, (I), was synthesized. We report here the crystal structure of (I).
Bond lengths and angles of the triazole rings (Table 1) are in agreement with those in previous reports (Li et al., 2005; Xu et al., 2005). The molecule exists in the thione tautomeric form, with an S═ C distance of 1.6762 (15) Å, which indicates substantial double-bond character (Escobar-Valderrama et al., 1989). The planes C1–C3/N1/N2/N3 and C6–C12/N7/O1 make dihedral angles of 71.56 (2) and 47.89 (3)° with the thione-substituted triazole plane C4/C5/N4/N5/N6/S1. There are some intra- and intermolecular hydrogen-bond interactions which stabilize the crystal structure (Table 2).