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Acta Cryst. (2006). E62, m3333-m3335 [ doi:10.1107/S1600536806047143 ]
An Eu-based metal-organic framework: poly[[tris(
4-benzene-1,4-dicarboxylato)bis(
2-N,N-diethylformamide)dieuropium(III)] 0.7-hydrate]
Online 15 November 2006
Key indicators
- Single-crystal synchrotron study
- T = 100 K
- Mean
(C-C) = 0.002 Å
- H-atom completeness 97%
- Disorder in main residue
- R factor = 0.037
- wR factor = 0.090
- Data-to-parameter ratio = 76.9
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT220_ALERT_2_A Large Non-Solvent C Ueq(max)/Ueq(min) ... 10.00 Ratio
| Author Response: The DEF molecule is only loosely attached to the framework and
is placed in large voids, which makes it prone to significant thermal motion
and disorder.
|
PLAT222_ALERT_3_A Large Non-Solvent H Ueq(max)/Ueq(min) ... 9.39 Ratio
| Author Response: The DEF molecule is only loosely attached to the framework and
is placed in large voids, which makes it prone to significant thermal motion
and disorder.
|
Alert level B
PLAT432_ALERT_2_B Short Inter X...Y Contact C19B .. O99 .. 2.73 Ang.
| Author Response: There is a hydrogen bond between C19B-H19D and O99, with a
hydrogen bond length of 2.01 \%A. Note =99 is part of a disordered water
molecule.
|
Alert level C
RINTA01_ALERT_3_C The value of Rint is greater than 0.10
Rint given 0.126
| Author Response: The data set consists of 22166 unique reflections measured in average
18.9 times. This huge redundancy leads to a high internal R-value.
|
PLAT020_ALERT_3_C The value of Rint is greater than 0.10 ......... 0.13
| Author Response: The data set consists of 22166 unique reflections measured in average
18.9 times. This huge redundancy leads to a high internal R-value.
|
PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.98
| Author Response: The experimental setup was geometrically limited at the synchrotron
source, hence it did not give full coverage.
|
PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ?
| Author Response: The reported SumFormula is correct, as the void is occupied
by a disordered water molecule and not a oxygen molecule. However the
disordered hydrogen atoms could not be found.
|
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
| Author Response: The moiety formula reported is correct, as the void is occupied
by a disordered water molecule and not a oxygen molecule.
|
PLAT213_ALERT_2_C Atom O9 has ADP max/min Ratio ............. 3.40 prola
| Author Response: This might be due to unresolved disorder.
|
PLAT213_ALERT_2_C Atom C19B has ADP max/min Ratio ............. 3.70 prola
| Author Response: This might be due to unresolved disorder.
|
PLAT220_ALERT_2_C Large Non-Solvent O Ueq(max)/Ueq(min) ... 3.50 Ratio
| Author Response: The DEF molecule is only loosely attached to the framework and
is placed in large voids, which makes it prone to significant thermal motion
and disorder.
|
PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C15
| Author Response: Disordered solvent molecule.
|
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C16B
| Author Response: Disordered solvent molecule.
|
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C17B
| Author Response: Disordered solvent molecule.
|
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C16A
| Author Response: Disordered solvent molecule.
|
PLAT301_ALERT_3_C Main Residue Disorder ......................... 13.00 Perc.
| Author Response: Disordered solvent molecules.
|
PLAT302_ALERT_4_C Anion/Solvent Disorder ......................... 35.00 Perc.
| Author Response: Disordered solvent molecules.
|
Alert level G
FORMU01_ALERT_2_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and the formula from the _atom_site* data.
Atom count from _chemical_formula_sum:C17 H17.7 Eu1 N1 O7.35
Atom count from the _atom_site data: C17 H17 Eu1 N1 O7.35
ABSMU_01 Radiation type not identified. Calculation of
_exptl_absorpt_correction_mu not performed.
| Author Response: The hydrogen atoms of the water molecule could not be found,
hence the _chemical_formula_sum differ from the formula from the
_atom_site* data.
|
CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected.
| Author Response: The hydrogen atoms of the water molecule could not be found,
hence there is a difference between formula and atom_site contents detected.
Therefore it is intentional that these atoms are missing in the atom site list.
|
CELLZ01_ALERT_1_G WARNING: H atoms missing from atom site list. Is this intentional?
From the CIF: _cell_formula_units_Z 8
From the CIF: _chemical_formula_sum C17 H17.7 Eu N O7.35
TEST: Compare cell contents of formula and atom_site data
atom Z*formula cif sites diff
C 136.00 136.00 0.00
H 141.60 136.00 5.60
Eu 8.00 8.00 0.00
N 8.00 8.00 0.00
O 58.80 58.80 0.00
| Author Response: The hydrogen atoms of the water molecule could not be found,
hence there is a difference between formula and atom_site contents detected.
Therefore it is intentional that these atoms are missing in the atom site list.
|
2 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
14 ALERT level C = Check and explain
3 ALERT level G = General alerts; check
4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
10 ALERT type 2 Indicator that the structure model may be wrong or deficient
5 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
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