The title complex, 5-hydroxynaphthalen-1-aminium 2-carboxy-4,6-dinitrophenolate monohydrate, C10H10NO+·C7H3N2O7−·H2O, shows a three-dimensional hydrogen-bonded framework structure in which columns comprising π-stacked cations and anions are interconnected by conventional hydrogen bonds.
Supporting information
CCDC reference: 648068
Key indicators
- Single-crystal X-ray study
- T = 297 K
- Mean (C-C) = 0.008 Å
- R factor = 0.066
- wR factor = 0.228
- Data-to-parameter ratio = 11.5
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT230_ALERT_2_B Hirshfeld Test Diff for N3 - C3 .. 8.23 su
Alert level C
PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ?
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for N3
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for N5
PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 8
0 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
4 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: MSC/AFC Diffractmeter Control Software (Molecular Structure
Corporation, 1999); cell refinement: MSC/AFC Diffractmeter Control Software; data reduction: TEXSAN for Windows (Molecular Structure Corporation, 1999); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: PLATON.
5-hydroxynaphthalen-1-aminium 2-carboxy-4,6-dinitrophenolate monohydrate
top
Crystal data top
C10H10NO+·C7H3N2O7−·H2O | F(000) = 840 |
Mr = 405.32 | Dx = 1.583 Mg m−3 |
Monoclinic, P21/n | Melting point = 467.8–469.5 K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 27.324 (6) Å | Cell parameters from 22 reflections |
b = 8.879 (4) Å | θ = 12.9–17.5° |
c = 7.037 (4) Å | µ = 0.13 mm−1 |
β = 94.98 (3)° | T = 297 K |
V = 1700.8 (13) Å3 | Prismatic, dark brown |
Z = 4 | 0.50 × 0.34 × 0.15 mm |
Data collection top
Rigaku AFC-7R diffractometer | 2096 reflections with I > 2σ(I) |
Radiation source: Rigaku rotating anode | Rint = 0.025 |
Graphite monochromator | θmax = 25.0°, θmin = 2.7° |
ω–2θ scans | h = −32→32 |
Absorption correction: ψ scan (TEXSAN for Windows; Molecular Structure Corporation, 1999) | k = 0→10 |
Tmin = 0.938, Tmax = 0.981 | l = −8→4 |
3545 measured reflections | 3 standard reflections every 150 min |
3006 independent reflections | intensity decay: 2.4% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.066 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.228 | H-atom parameters not refined |
S = 1.14 | w = 1/[σ2(Fo2) + (0.1P)2 + 2.1667P] where P = (Fo2 + 2Fc2)/3 |
3006 reflections | (Δ/σ)max = 0.002 |
262 parameters | Δρmax = 0.38 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All su's are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O5A | 0.15967 (14) | −0.0536 (4) | 0.0383 (6) | 0.0529 (14) | |
N1A | 0.06875 (16) | 0.5404 (5) | 0.2620 (7) | 0.0456 (17) | |
C1A | 0.07015 (18) | 0.3815 (6) | 0.2115 (7) | 0.0374 (17) | |
C2A | 0.02821 (19) | 0.3000 (6) | 0.2044 (8) | 0.0418 (17) | |
C3A | 0.02903 (19) | 0.1453 (6) | 0.1597 (8) | 0.0425 (19) | |
C4A | 0.07194 (19) | 0.0796 (6) | 0.1206 (8) | 0.0407 (17) | |
C5A | 0.16135 (19) | 0.0954 (6) | 0.0837 (8) | 0.0406 (17) | |
C6A | 0.20357 (19) | 0.1797 (7) | 0.0920 (8) | 0.0457 (19) | |
C7A | 0.2026 (2) | 0.3316 (7) | 0.1381 (8) | 0.046 (2) | |
C8A | 0.16008 (18) | 0.4025 (6) | 0.1773 (8) | 0.0409 (17) | |
C9A | 0.11612 (17) | 0.3176 (6) | 0.1692 (7) | 0.0330 (17) | |
C10A | 0.11611 (19) | 0.1620 (6) | 0.1241 (7) | 0.0366 (17) | |
O2 | 0.13135 (17) | 0.4621 (5) | 0.6717 (7) | 0.0703 (17) | |
O31 | 0.0379 (2) | 0.4094 (6) | 0.6891 (10) | 0.103 (3) | |
O32 | 0.01000 (19) | 0.1875 (7) | 0.6763 (10) | 0.099 (3) | |
O51 | 0.1036 (2) | −0.2159 (6) | 0.4962 (8) | 0.089 (2) | |
O52 | 0.1812 (2) | −0.2007 (6) | 0.4740 (9) | 0.096 (2) | |
O71 | 0.26305 (17) | 0.2858 (6) | 0.5687 (7) | 0.079 (2) | |
O72 | 0.22299 (18) | 0.4808 (6) | 0.6577 (8) | 0.0819 (19) | |
N3 | 0.0430 (2) | 0.2804 (7) | 0.6727 (8) | 0.062 (2) | |
N5 | 0.1417 (2) | −0.1468 (6) | 0.5095 (8) | 0.0558 (19) | |
C1 | 0.1802 (2) | 0.2464 (6) | 0.6107 (7) | 0.0404 (17) | |
C2 | 0.1351 (2) | 0.3187 (6) | 0.6427 (8) | 0.0449 (19) | |
C3 | 0.0935 (2) | 0.2234 (7) | 0.6393 (8) | 0.0428 (19) | |
C4 | 0.09518 (18) | 0.0745 (6) | 0.5995 (7) | 0.0393 (17) | |
C5 | 0.1392 (2) | 0.0109 (5) | 0.5632 (7) | 0.0373 (17) | |
C6 | 0.18198 (18) | 0.0953 (7) | 0.5688 (7) | 0.0406 (19) | |
C7 | 0.2268 (2) | 0.3370 (8) | 0.6105 (9) | 0.054 (3) | |
O1W | 0.09512 (16) | 0.6862 (5) | 0.9408 (7) | 0.0678 (17) | |
H2A | −0.00180 | 0.34700 | 0.22950 | 0.0500* | |
H3A | −0.00030 | 0.08730 | 0.15680 | 0.0510* | |
H4A | 0.07220 | −0.02470 | 0.09020 | 0.0490* | |
H5A | 0.18600 | −0.10800 | 0.00200 | 0.0640* | |
H6A | 0.23370 | 0.13380 | 0.06610 | 0.0550* | |
H7A | 0.23220 | 0.38790 | 0.14260 | 0.0560* | |
H8A | 0.16010 | 0.50650 | 0.20920 | 0.0490* | |
H11A | 0.08790 | 0.58630 | 0.36030 | 0.0580* | |
H12A | 0.07700 | 0.58000 | 0.15400 | 0.0580* | |
H13A | 0.03750 | 0.56570 | 0.29490 | 0.0580* | |
H4 | 0.06630 | 0.01480 | 0.59670 | 0.0480* | |
H6 | 0.21220 | 0.04920 | 0.54400 | 0.0490* | |
H72 | 0.19000 | 0.48500 | 0.66300 | 0.0980* | |
H11W | 0.12000 | 0.73510 | 0.96080 | 0.0820* | |
H12W | 0.10400 | 0.61600 | 0.85700 | 0.0820* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O5A | 0.044 (2) | 0.045 (2) | 0.071 (3) | 0.0106 (19) | 0.012 (2) | −0.006 (2) |
N1A | 0.038 (3) | 0.041 (3) | 0.059 (3) | −0.001 (2) | 0.011 (2) | −0.015 (2) |
C1A | 0.037 (3) | 0.037 (3) | 0.038 (3) | 0.003 (2) | 0.003 (2) | −0.001 (2) |
C2A | 0.033 (3) | 0.043 (3) | 0.049 (3) | 0.002 (3) | 0.001 (2) | −0.002 (3) |
C3A | 0.031 (3) | 0.042 (3) | 0.054 (4) | −0.003 (2) | 0.001 (3) | −0.005 (3) |
C4A | 0.040 (3) | 0.037 (3) | 0.044 (3) | −0.006 (2) | −0.002 (2) | −0.004 (3) |
C5A | 0.036 (3) | 0.046 (3) | 0.040 (3) | 0.006 (3) | 0.005 (2) | −0.003 (3) |
C6A | 0.036 (3) | 0.060 (4) | 0.042 (3) | 0.010 (3) | 0.009 (3) | −0.001 (3) |
C7A | 0.034 (3) | 0.055 (4) | 0.050 (4) | −0.005 (3) | 0.008 (3) | 0.004 (3) |
C8A | 0.034 (3) | 0.044 (3) | 0.044 (3) | −0.002 (2) | 0.000 (2) | 0.001 (3) |
C9A | 0.029 (3) | 0.045 (3) | 0.025 (3) | −0.001 (2) | 0.003 (2) | 0.001 (2) |
C10A | 0.040 (3) | 0.040 (3) | 0.030 (3) | 0.005 (2) | 0.005 (2) | 0.000 (2) |
O2 | 0.081 (3) | 0.046 (3) | 0.086 (3) | −0.004 (2) | 0.020 (3) | −0.008 (2) |
O31 | 0.091 (4) | 0.065 (4) | 0.154 (6) | 0.019 (3) | 0.019 (4) | −0.031 (4) |
O32 | 0.049 (3) | 0.099 (4) | 0.152 (6) | −0.001 (3) | 0.031 (3) | 0.004 (4) |
O51 | 0.097 (4) | 0.055 (3) | 0.112 (5) | −0.022 (3) | −0.004 (3) | −0.015 (3) |
O52 | 0.104 (4) | 0.054 (3) | 0.132 (5) | 0.028 (3) | 0.029 (4) | −0.011 (3) |
O71 | 0.039 (3) | 0.107 (4) | 0.092 (4) | −0.010 (3) | 0.007 (3) | 0.028 (3) |
O72 | 0.071 (3) | 0.071 (3) | 0.104 (4) | −0.034 (3) | 0.010 (3) | −0.017 (3) |
N3 | 0.069 (4) | 0.064 (4) | 0.053 (3) | −0.003 (3) | 0.000 (3) | 0.001 (3) |
N5 | 0.072 (4) | 0.038 (3) | 0.056 (3) | −0.005 (3) | −0.003 (3) | −0.001 (2) |
C1 | 0.041 (3) | 0.044 (3) | 0.035 (3) | −0.019 (3) | −0.003 (2) | 0.007 (3) |
C2 | 0.068 (4) | 0.029 (3) | 0.037 (3) | 0.001 (3) | 0.001 (3) | −0.003 (2) |
C3 | 0.040 (3) | 0.053 (4) | 0.036 (3) | 0.016 (3) | 0.006 (2) | 0.006 (3) |
C4 | 0.033 (3) | 0.048 (3) | 0.037 (3) | −0.007 (3) | 0.004 (2) | 0.006 (3) |
C5 | 0.050 (3) | 0.022 (3) | 0.039 (3) | 0.000 (2) | −0.001 (2) | 0.000 (2) |
C6 | 0.029 (3) | 0.057 (4) | 0.036 (3) | 0.008 (3) | 0.004 (2) | 0.007 (3) |
C7 | 0.045 (4) | 0.069 (5) | 0.045 (4) | −0.013 (3) | −0.004 (3) | 0.009 (3) |
O1W | 0.065 (3) | 0.058 (3) | 0.082 (3) | −0.005 (2) | 0.015 (2) | −0.004 (3) |
Geometric parameters (Å, º) top
O5A—C5A | 1.361 (6) | C4A—C10A | 1.410 (7) |
O5A—H5A | 0.9200 | C5A—C6A | 1.372 (8) |
O2—C2 | 1.295 (7) | C5A—C10A | 1.421 (7) |
O31—N3 | 1.161 (8) | C6A—C7A | 1.388 (9) |
O32—N3 | 1.224 (8) | C7A—C8A | 1.370 (8) |
O51—N5 | 1.205 (8) | C8A—C9A | 1.415 (7) |
O52—N5 | 1.226 (8) | C9A—C10A | 1.418 (8) |
O71—C7 | 1.151 (8) | C2A—H2A | 0.9500 |
O72—C7 | 1.326 (9) | C3A—H3A | 0.9500 |
O72—H72 | 0.9100 | C4A—H4A | 0.9500 |
O1W—H12W | 0.9100 | C6A—H6A | 0.9500 |
O1W—H11W | 0.8100 | C7A—H7A | 0.9500 |
N1A—C1A | 1.456 (7) | C8A—H8A | 0.9500 |
N1A—H13A | 0.9300 | C1—C7 | 1.506 (8) |
N1A—H12A | 0.8800 | C1—C6 | 1.375 (8) |
N1A—H11A | 0.9200 | C1—C2 | 1.425 (8) |
N3—C3 | 1.507 (8) | C2—C3 | 1.416 (8) |
N5—C5 | 1.454 (7) | C3—C4 | 1.353 (8) |
C1A—C9A | 1.433 (7) | C4—C5 | 1.373 (7) |
C1A—C2A | 1.353 (7) | C5—C6 | 1.386 (7) |
C2A—C3A | 1.410 (8) | C4—H4 | 0.9500 |
C3A—C4A | 1.359 (7) | C6—H6 | 0.9500 |
| | | |
C5A—O5A—H5A | 124.00 | C1A—C2A—H2A | 120.00 |
C7—O72—H72 | 99.00 | C3A—C2A—H2A | 120.00 |
H11W—O1W—H12W | 102.00 | C4A—C3A—H3A | 120.00 |
H11A—N1A—H13A | 100.00 | C2A—C3A—H3A | 120.00 |
C1A—N1A—H11A | 126.00 | C10A—C4A—H4A | 119.00 |
C1A—N1A—H12A | 99.00 | C3A—C4A—H4A | 119.00 |
C1A—N1A—H13A | 110.00 | C7A—C6A—H6A | 120.00 |
H11A—N1A—H12A | 107.00 | C5A—C6A—H6A | 120.00 |
H12A—N1A—H13A | 115.00 | C6A—C7A—H7A | 119.00 |
O31—N3—C3 | 117.8 (6) | C8A—C7A—H7A | 119.00 |
O32—N3—C3 | 117.6 (6) | C7A—C8A—H8A | 121.00 |
O31—N3—O32 | 124.6 (6) | C9A—C8A—H8A | 121.00 |
O51—N5—C5 | 116.8 (5) | C2—C1—C7 | 120.2 (5) |
O52—N5—C5 | 119.4 (5) | C6—C1—C7 | 118.4 (5) |
O51—N5—O52 | 123.7 (6) | C2—C1—C6 | 121.4 (5) |
N1A—C1A—C9A | 118.5 (4) | C1—C2—C3 | 115.6 (5) |
C2A—C1A—C9A | 122.4 (5) | O2—C2—C3 | 121.1 (5) |
N1A—C1A—C2A | 119.2 (5) | O2—C2—C1 | 123.3 (5) |
C1A—C2A—C3A | 120.0 (5) | N3—C3—C2 | 122.8 (5) |
C2A—C3A—C4A | 119.6 (5) | C2—C3—C4 | 123.1 (5) |
C3A—C4A—C10A | 121.7 (5) | N3—C3—C4 | 114.1 (5) |
C6A—C5A—C10A | 120.5 (5) | C3—C4—C5 | 119.1 (5) |
O5A—C5A—C6A | 123.5 (5) | N5—C5—C6 | 118.0 (5) |
O5A—C5A—C10A | 116.1 (5) | N5—C5—C4 | 120.4 (5) |
C5A—C6A—C7A | 120.5 (5) | C4—C5—C6 | 121.5 (5) |
C6A—C7A—C8A | 121.8 (5) | C1—C6—C5 | 119.2 (5) |
C7A—C8A—C9A | 118.6 (5) | O72—C7—C1 | 115.4 (5) |
C8A—C9A—C10A | 120.8 (5) | O71—C7—O72 | 122.2 (6) |
C1A—C9A—C10A | 116.7 (4) | O71—C7—C1 | 122.4 (6) |
C1A—C9A—C8A | 122.5 (5) | C3—C4—H4 | 120.00 |
C4A—C10A—C9A | 119.6 (5) | C5—C4—H4 | 120.00 |
C5A—C10A—C9A | 117.8 (5) | C1—C6—H6 | 120.00 |
C4A—C10A—C5A | 122.6 (5) | C5—C6—H6 | 120.00 |
| | | |
O32—N3—C3—C2 | −176.4 (6) | C7A—C8A—C9A—C10A | 0.9 (8) |
O32—N3—C3—C4 | 5.8 (8) | C7A—C8A—C9A—C1A | 178.8 (5) |
O31—N3—C3—C2 | 5.2 (9) | C8A—C9A—C10A—C5A | −1.3 (7) |
O31—N3—C3—C4 | −172.6 (6) | C1A—C9A—C10A—C4A | 0.8 (7) |
O51—N5—C5—C4 | 1.1 (8) | C8A—C9A—C10A—C4A | 178.8 (5) |
O52—N5—C5—C6 | 1.1 (8) | C1A—C9A—C10A—C5A | −179.3 (5) |
O51—N5—C5—C6 | −176.3 (5) | C6—C1—C2—C3 | 3.5 (8) |
O52—N5—C5—C4 | 178.6 (6) | C6—C1—C2—O2 | −175.9 (5) |
N1A—C1A—C2A—C3A | −178.7 (5) | C2—C1—C6—C5 | −1.9 (8) |
C2A—C1A—C9A—C10A | −1.7 (7) | C7—C1—C2—O2 | 0.4 (8) |
N1A—C1A—C9A—C8A | 0.9 (7) | C7—C1—C2—C3 | 179.8 (5) |
C2A—C1A—C9A—C8A | −179.7 (5) | C2—C1—C7—O72 | 5.6 (8) |
C9A—C1A—C2A—C3A | 2.0 (8) | C6—C1—C7—O71 | 3.4 (9) |
N1A—C1A—C9A—C10A | 178.9 (4) | C6—C1—C7—O72 | −178.0 (5) |
C1A—C2A—C3A—C4A | −1.2 (8) | C7—C1—C6—C5 | −178.3 (5) |
C2A—C3A—C4A—C10A | 0.3 (8) | C2—C1—C7—O71 | −173.0 (6) |
C3A—C4A—C10A—C9A | −0.1 (8) | C1—C2—C3—N3 | 179.3 (5) |
C3A—C4A—C10A—C5A | 180.0 (5) | O2—C2—C3—N3 | −1.3 (9) |
C10A—C5A—C6A—C7A | −0.7 (8) | O2—C2—C3—C4 | 176.4 (5) |
O5A—C5A—C6A—C7A | 179.6 (5) | C1—C2—C3—C4 | −3.1 (8) |
C6A—C5A—C10A—C9A | 1.2 (8) | C2—C3—C4—C5 | 1.0 (8) |
C6A—C5A—C10A—C4A | −178.9 (5) | N3—C3—C4—C5 | 178.9 (5) |
O5A—C5A—C10A—C4A | 0.9 (8) | C3—C4—C5—N5 | −176.5 (5) |
O5A—C5A—C10A—C9A | −179.1 (5) | C3—C4—C5—C6 | 0.8 (8) |
C5A—C6A—C7A—C8A | 0.2 (9) | C4—C5—C6—C1 | −0.4 (8) |
C6A—C7A—C8A—C9A | −0.3 (8) | N5—C5—C6—C1 | 177.1 (5) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O72—H72···O2 | 0.91 | 1.62 | 2.520 (7) | 170 |
O5A—H5A···O71i | 0.92 | 1.79 | 2.708 (6) | 180 |
O1W—H11W···O5Aii | 0.81 | 2.21 | 2.951 (6) | 152 |
O1W—H12W···O2 | 0.91 | 2.07 | 2.975 (7) | 174 |
N1A—H11A···O51iii | 0.92 | 2.03 | 2.834 (7) | 145 |
N1A—H12A···O1Wiv | 0.88 | 1.87 | 2.754 (7) | 173 |
N1A—H13A···O31v | 0.93 | 2.0800 | 2.997 (7) | 166 |
N1A—H13A···O32v | 0.93 | 2.56 | 3.289 (8) | 135 |
C2A—H2A···O31v | 0.95 | 2.47 | 3.274 (8) | 143 |
C6A—H6A···O72i | 0.95 | 2.46 | 3.293 (8) | 146 |
Symmetry codes: (i) −x+1/2, y−1/2, −z+1/2; (ii) x, y+1, z+1; (iii) x, y+1, z; (iv) x, y, z−1; (v) −x, −y+1, −z+1. |