Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807019290/hg2224sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807019290/hg2224Isup2.hkl |
CCDC reference: 651392
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.043
- wR factor = 0.135
- Data-to-parameter ratio = 18.3
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ? PLAT154_ALERT_1_C The su's on the Cell Angles are Equal (x 10000) 3000 Deg. PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C1 PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C2 PLAT420_ALERT_2_C D-H Without Acceptor N1 - H1A ... ?
Alert level G PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A mixture of 3,5-Dimethyl-phenylamine (0.02 mol) and 1-isothiocyanatobenzeneat (0.02 mol) was stirred in refluxing ethanol (30 ml) for 0.5 h to afford the title compound (4.35 g, yield 85%). Single crystals suitable for X-ray measurementswere obtained by recrystallization from ethanol at room temperature.
H atoms were fixed geometrically and allowed to ride on their parent atoms, with N—H and C—H distances of 0.86 and 0.93–0.96 Å, respectively, and with Uiso=1.2–1.5Ueq of the parent atoms.
Thiosemicarbazides are able to form complexes with biological activities (Shen et al., 1998). Thiourea derivatives have been successful screened for various biological activities (Antholine & Taketa,1982), and some of them have shown promising anti-HIV properties (Mao et al., 1999). The title compound was synthesized as part of our study of these ligands. Here we report the crystal structure of (I).
In (I) (Fig. 1),the bond lengths and angles are usual for this type of compound (Ji et al., 2002). The mean planes p1(S1,N1,N2,C8,C9,C10) and p2 (N1,C1,C2,C3,C4,C5,C6,C7) make a dihedral angle of 59.69 (1)°. The dihedral angles formed by phenyl ring (C3,C4,C5,C6,C7,C8) and phenyl ring (C10,C11,C12,C13,C14,C15) with p1 are 59.82 (2)and 52.72 (2)° respectively. The dihedral angles between the benzene rings is 48.77 (1)°. The crystal packing is stabilized by van der Waals forces.
For related literature, see: Antholine & Taketa (1982); Ji et al. (2002); Mao et al. (1999); Shen et al. (1998).
Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell refinement: CAD-4 Software; data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL/PC (Sheldrick, 1990); software used to prepare material for publication: WinGX (Farrugia, 1999).
Fig. 1. The molecular structure and atom-labeling scheme for (I), with displacement ellipsoids drawn at the 30% probability level. |
C15H16N2S | Z = 2 |
Mr = 256.36 | F(000) = 272 |
Triclinic, P1 | Dx = 1.197 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.3740 (17) Å | Cell parameters from 25 reflections |
b = 9.1870 (18) Å | θ = 4–14° |
c = 9.889 (2) Å | µ = 0.21 mm−1 |
α = 107.57 (3)° | T = 293 K |
β = 98.57 (3)° | Block, colourless |
γ = 94.42 (3)° | 0.20 × 0.18 × 0.15 mm |
V = 711.2 (2) Å3 |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.014 |
Radiation source: fine-focus sealed tube | θmax = 27.0°, θmin = 2.2° |
Graphite monochromator | h = 0→9 |
ω scans | k = −10→10 |
3177 measured reflections | l = −11→11 |
2975 independent reflections | 3 standard reflections every 100 reflections |
2373 reflections with I > 2σ(I) | intensity decay: none |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.135 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0792P)2 + 0.1571P] where P = (Fo2 + 2Fc2)/3 |
2975 reflections | (Δ/σ)max < 0.001 |
163 parameters | Δρmax = 0.28 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
C15H16N2S | γ = 94.42 (3)° |
Mr = 256.36 | V = 711.2 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.3740 (17) Å | Mo Kα radiation |
b = 9.1870 (18) Å | µ = 0.21 mm−1 |
c = 9.889 (2) Å | T = 293 K |
α = 107.57 (3)° | 0.20 × 0.18 × 0.15 mm |
β = 98.57 (3)° |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.014 |
3177 measured reflections | 3 standard reflections every 100 reflections |
2975 independent reflections | intensity decay: none |
2373 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.135 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.28 e Å−3 |
2975 reflections | Δρmin = −0.26 e Å−3 |
163 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.38703 (6) | 0.61876 (6) | 0.35631 (5) | 0.05568 (19) | |
N1 | 0.17597 (19) | 0.76385 (18) | 0.51155 (16) | 0.0481 (4) | |
H1A | 0.1340 | 0.7829 | 0.5883 | 0.058* | |
N2 | 0.31741 (19) | 0.59706 (19) | 0.60148 (16) | 0.0499 (4) | |
H2A | 0.3850 | 0.5304 | 0.5884 | 0.060* | |
C1 | 0.2911 (3) | 1.1300 (3) | 0.2466 (3) | 0.0826 (8) | |
H1B | 0.3984 | 1.1334 | 0.2987 | 0.124* | |
H1C | 0.2584 | 1.2312 | 0.2728 | 0.124* | |
H1D | 0.2915 | 1.0943 | 0.1449 | 0.124* | |
C2 | −0.2810 (3) | 0.8645 (4) | 0.1871 (3) | 0.0815 (8) | |
H2B | −0.3012 | 0.9263 | 0.1251 | 0.122* | |
H2C | −0.3452 | 0.8911 | 0.2617 | 0.122* | |
H2D | −0.3101 | 0.7576 | 0.1318 | 0.122* | |
C3 | 0.2287 (2) | 0.9438 (2) | 0.3790 (2) | 0.0477 (4) | |
H3A | 0.3381 | 0.9609 | 0.4218 | 0.057* | |
C4 | 0.1728 (2) | 1.0214 (2) | 0.2835 (2) | 0.0513 (5) | |
C5 | 0.0072 (2) | 0.9943 (2) | 0.2225 (2) | 0.0507 (5) | |
H5A | −0.0310 | 1.0453 | 0.1584 | 0.061* | |
C6 | −0.1017 (2) | 0.8935 (2) | 0.2548 (2) | 0.0492 (4) | |
C7 | −0.0428 (2) | 0.8165 (2) | 0.34959 (19) | 0.0452 (4) | |
H7A | −0.1138 | 0.7483 | 0.3724 | 0.054* | |
C8 | 0.1213 (2) | 0.84127 (19) | 0.40996 (18) | 0.0419 (4) | |
C9 | 0.2877 (2) | 0.6635 (2) | 0.49727 (18) | 0.0417 (4) | |
C10 | 0.2511 (2) | 0.6231 (2) | 0.73090 (18) | 0.0418 (4) | |
C11 | 0.3591 (3) | 0.6609 (3) | 0.8603 (2) | 0.0635 (6) | |
H11A | 0.4707 | 0.6749 | 0.8619 | 0.076* | |
C12 | 0.3007 (3) | 0.6779 (3) | 0.9874 (2) | 0.0723 (7) | |
H12A | 0.3736 | 0.7021 | 1.0740 | 0.087* | |
C13 | 0.1356 (3) | 0.6592 (2) | 0.9868 (2) | 0.0579 (5) | |
H13A | 0.0973 | 0.6729 | 1.0728 | 0.069* | |
C14 | 0.0281 (2) | 0.6203 (2) | 0.8582 (2) | 0.0531 (5) | |
H14A | −0.0833 | 0.6064 | 0.8572 | 0.064* | |
C15 | 0.0849 (2) | 0.6016 (2) | 0.7296 (2) | 0.0461 (4) | |
H15A | 0.0117 | 0.5747 | 0.6429 | 0.055* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0619 (3) | 0.0785 (4) | 0.0472 (3) | 0.0398 (3) | 0.0248 (2) | 0.0356 (2) |
N1 | 0.0564 (9) | 0.0570 (9) | 0.0464 (8) | 0.0294 (7) | 0.0211 (7) | 0.0282 (7) |
N2 | 0.0534 (9) | 0.0676 (10) | 0.0466 (8) | 0.0331 (8) | 0.0205 (7) | 0.0327 (7) |
C1 | 0.0739 (16) | 0.0851 (17) | 0.114 (2) | 0.0088 (13) | 0.0233 (15) | 0.0667 (17) |
C2 | 0.0535 (13) | 0.102 (2) | 0.0914 (19) | 0.0119 (13) | −0.0059 (12) | 0.0430 (16) |
C3 | 0.0422 (9) | 0.0523 (10) | 0.0547 (10) | 0.0127 (8) | 0.0092 (8) | 0.0241 (8) |
C4 | 0.0566 (11) | 0.0489 (10) | 0.0591 (11) | 0.0140 (8) | 0.0172 (9) | 0.0280 (9) |
C5 | 0.0606 (12) | 0.0508 (10) | 0.0497 (10) | 0.0219 (9) | 0.0094 (8) | 0.0259 (8) |
C6 | 0.0462 (10) | 0.0501 (10) | 0.0525 (10) | 0.0155 (8) | 0.0061 (8) | 0.0169 (8) |
C7 | 0.0464 (10) | 0.0440 (9) | 0.0508 (10) | 0.0130 (7) | 0.0136 (8) | 0.0194 (8) |
C8 | 0.0473 (10) | 0.0430 (9) | 0.0436 (9) | 0.0193 (7) | 0.0144 (7) | 0.0193 (7) |
C9 | 0.0412 (9) | 0.0495 (9) | 0.0404 (8) | 0.0167 (7) | 0.0095 (7) | 0.0196 (7) |
C10 | 0.0472 (9) | 0.0451 (9) | 0.0417 (9) | 0.0138 (7) | 0.0131 (7) | 0.0220 (7) |
C11 | 0.0443 (10) | 0.1004 (17) | 0.0518 (11) | 0.0002 (10) | 0.0069 (8) | 0.0360 (11) |
C12 | 0.0680 (14) | 0.1048 (19) | 0.0416 (11) | −0.0103 (13) | 0.0039 (10) | 0.0279 (11) |
C13 | 0.0745 (14) | 0.0600 (12) | 0.0488 (11) | 0.0094 (10) | 0.0270 (10) | 0.0236 (9) |
C14 | 0.0512 (11) | 0.0538 (11) | 0.0683 (13) | 0.0142 (8) | 0.0252 (9) | 0.0313 (9) |
C15 | 0.0456 (10) | 0.0492 (10) | 0.0482 (10) | 0.0111 (7) | 0.0084 (7) | 0.0212 (8) |
S1—C9 | 1.6897 (17) | C4—C5 | 1.398 (3) |
N1—C9 | 1.356 (2) | C5—C6 | 1.388 (3) |
N1—C8 | 1.439 (2) | C5—H5A | 0.9300 |
N1—H1A | 0.8600 | C6—C7 | 1.393 (2) |
N2—C9 | 1.350 (2) | C7—C8 | 1.386 (3) |
N2—C10 | 1.432 (2) | C7—H7A | 0.9300 |
N2—H2A | 0.8600 | C10—C11 | 1.383 (3) |
C1—C4 | 1.512 (3) | C10—C15 | 1.388 (3) |
C1—H1B | 0.9600 | C11—C12 | 1.386 (3) |
C1—H1C | 0.9600 | C11—H11A | 0.9300 |
C1—H1D | 0.9600 | C12—C13 | 1.378 (3) |
C2—C6 | 1.518 (3) | C12—H12A | 0.9300 |
C2—H2B | 0.9600 | C13—C14 | 1.375 (3) |
C2—H2C | 0.9600 | C13—H13A | 0.9300 |
C2—H2D | 0.9600 | C14—C15 | 1.390 (3) |
C3—C8 | 1.384 (3) | C14—H14A | 0.9300 |
C3—C4 | 1.395 (2) | C15—H15A | 0.9300 |
C3—H3A | 0.9300 | ||
C9—N1—C8 | 125.94 (14) | C7—C6—C2 | 120.04 (19) |
C9—N1—H1A | 117.0 | C8—C7—C6 | 120.14 (17) |
C8—N1—H1A | 117.0 | C8—C7—H7A | 119.9 |
C9—N2—C10 | 128.50 (14) | C6—C7—H7A | 119.9 |
C9—N2—H2A | 115.8 | C3—C8—C7 | 120.93 (16) |
C10—N2—H2A | 115.8 | C3—C8—N1 | 120.63 (16) |
C4—C1—H1B | 109.5 | C7—C8—N1 | 118.36 (16) |
C4—C1—H1C | 109.5 | N2—C9—N1 | 117.07 (15) |
H1B—C1—H1C | 109.5 | N2—C9—S1 | 119.88 (12) |
C4—C1—H1D | 109.5 | N1—C9—S1 | 123.04 (13) |
H1B—C1—H1D | 109.5 | C11—C10—C15 | 119.58 (17) |
H1C—C1—H1D | 109.5 | C11—C10—N2 | 117.76 (16) |
C6—C2—H2B | 109.5 | C15—C10—N2 | 122.50 (16) |
C6—C2—H2C | 109.5 | C10—C11—C12 | 119.82 (19) |
H2B—C2—H2C | 109.5 | C10—C11—H11A | 120.1 |
C6—C2—H2D | 109.5 | C12—C11—H11A | 120.1 |
H2B—C2—H2D | 109.5 | C13—C12—C11 | 120.8 (2) |
H2C—C2—H2D | 109.5 | C13—C12—H12A | 119.6 |
C8—C3—C4 | 119.93 (17) | C11—C12—H12A | 119.6 |
C8—C3—H3A | 120.0 | C14—C13—C12 | 119.49 (18) |
C4—C3—H3A | 120.0 | C14—C13—H13A | 120.3 |
C3—C4—C5 | 118.50 (17) | C12—C13—H13A | 120.3 |
C3—C4—C1 | 119.87 (19) | C13—C14—C15 | 120.41 (18) |
C5—C4—C1 | 121.63 (18) | C13—C14—H14A | 119.8 |
C6—C5—C4 | 121.90 (16) | C15—C14—H14A | 119.8 |
C6—C5—H5A | 119.1 | C10—C15—C14 | 119.91 (17) |
C4—C5—H5A | 119.1 | C10—C15—H15A | 120.0 |
C5—C6—C7 | 118.59 (17) | C14—C15—H15A | 120.0 |
C5—C6—C2 | 121.36 (18) | ||
C8—C3—C4—C5 | 0.8 (3) | C10—N2—C9—N1 | −3.0 (3) |
C8—C3—C4—C1 | −178.3 (2) | C10—N2—C9—S1 | 177.62 (15) |
C3—C4—C5—C6 | 0.2 (3) | C8—N1—C9—N2 | −176.96 (17) |
C1—C4—C5—C6 | 179.3 (2) | C8—N1—C9—S1 | 2.4 (3) |
C4—C5—C6—C7 | −0.7 (3) | C9—N2—C10—C11 | −126.3 (2) |
C4—C5—C6—C2 | −179.7 (2) | C9—N2—C10—C15 | 58.1 (3) |
C5—C6—C7—C8 | 0.2 (3) | C15—C10—C11—C12 | −0.4 (3) |
C2—C6—C7—C8 | 179.1 (2) | N2—C10—C11—C12 | −176.1 (2) |
C4—C3—C8—C7 | −1.3 (3) | C10—C11—C12—C13 | −0.8 (4) |
C4—C3—C8—N1 | −178.10 (17) | C11—C12—C13—C14 | 1.3 (4) |
C6—C7—C8—C3 | 0.9 (3) | C12—C13—C14—C15 | −0.8 (3) |
C6—C7—C8—N1 | 177.69 (16) | C11—C10—C15—C14 | 0.9 (3) |
C9—N1—C8—C3 | −63.1 (3) | N2—C10—C15—C14 | 176.39 (16) |
C9—N1—C8—C7 | 120.0 (2) | C13—C14—C15—C10 | −0.4 (3) |
Experimental details
Crystal data | |
Chemical formula | C15H16N2S |
Mr | 256.36 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 8.3740 (17), 9.1870 (18), 9.889 (2) |
α, β, γ (°) | 107.57 (3), 98.57 (3), 94.42 (3) |
V (Å3) | 711.2 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.21 |
Crystal size (mm) | 0.20 × 0.18 × 0.15 |
Data collection | |
Diffractometer | Enraf–Nonius CAD-4 |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3177, 2975, 2373 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.638 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.135, 1.05 |
No. of reflections | 2975 |
No. of parameters | 163 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.28, −0.26 |
Computer programs: CAD-4 Software (Enraf–Nonius, 1989), CAD-4 Software, NRCVAX (Gabe et al., 1989), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL/PC (Sheldrick, 1990), WinGX (Farrugia, 1999).
Thiosemicarbazides are able to form complexes with biological activities (Shen et al., 1998). Thiourea derivatives have been successful screened for various biological activities (Antholine & Taketa,1982), and some of them have shown promising anti-HIV properties (Mao et al., 1999). The title compound was synthesized as part of our study of these ligands. Here we report the crystal structure of (I).
In (I) (Fig. 1),the bond lengths and angles are usual for this type of compound (Ji et al., 2002). The mean planes p1(S1,N1,N2,C8,C9,C10) and p2 (N1,C1,C2,C3,C4,C5,C6,C7) make a dihedral angle of 59.69 (1)°. The dihedral angles formed by phenyl ring (C3,C4,C5,C6,C7,C8) and phenyl ring (C10,C11,C12,C13,C14,C15) with p1 are 59.82 (2)and 52.72 (2)° respectively. The dihedral angles between the benzene rings is 48.77 (1)°. The crystal packing is stabilized by van der Waals forces.