Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807025160/hk2256sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807025160/hk2256Isup2.hkl |
CCDC reference: 651519
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.003 Å
- R factor = 0.046
- wR factor = 0.094
- Data-to-parameter ratio = 15.7
checkCIF/PLATON results
No syntax errors found
Alert level C REFLT03_ALERT_3_C Reflection count < 95% complete From the CIF: _diffrn_reflns_theta_max 28.29 From the CIF: _diffrn_reflns_theta_full 28.29 From the CIF: _reflns_number_total 2148 TEST2: Reflns within _diffrn_reflns_theta_max Count of symmetry unique reflns 2312 Completeness (_total/calc) 92.91% PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT180_ALERT_3_C Check Cell Rounding: # of Values Ending with 0 = 3
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The title compound, (I), is synthesized by the reaction of methyl ester of 3,4-dimethoxybenzoic acid with hdyrazine hydrate using the reported procedure (Furniss et al., 1978). For the preparation of (I), a mixture of methyl-3,4-dimethoxybenzoate (2.10 g, 10 mmol) and hydrazine hydrate (80%, 15 ml) in absolute ethanol (50 ml) was refluxed for 5 h at 413–423 K. The excess solvent was removed by distillation. The solid residue was filtered off, washed with water and recrystallized from ethanol (30%) to give the title compound (yield: 1.89 g, 90%, m.p. 391–392 K). Colorless single crystals of (I) were obtained by slow evaporation of an ethanol solution at room temperature.
H atoms of NH2 group were located in difference syntheses and refined isotropically [N—H = 0.90 (2) and 0.95 (2) Å and Uiso(H) = 0.040 (7) and 0.053 (8) Å2]. The remaining H atoms were positioned geometrically, with N—H = 0.88 Å (for NH) and C—H = 0.95 and 0.98 Å for aromatic and methyl H atoms, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,N), where x = 1.5 for methyl H, and x = 1.2 for all other H atoms.
Aromatic hydrazides are important intermediates in heterocyclic chemistry and have been used for the synthesis of various biologically active five-membered heterocycles such as 2,5-disubstituted-1,3,4-oxadiazoles (Zheng et al., 2003; Al-Talib et al., 1990) and 5-substituted-2-mercapto-1,3,4-oxadiazoles (Yousif et al., 1986; Ahmad et al., 2001; Al-Soud et al., 2004; El-Emam et al., 2004). In view of the versatility of these compounds, we have synthesized the title compound, (I), and reported its crystal structure.
In the molecule of the title compound, (I), (Fig. 1), the bond lengths and angles are within normal ranges (Allen et al., 1987). The dihedral angle between the planar hydrazidic group (C7/O1/N1/N2) and benzene ring (C1—C6) is 63.27 (3)°.
In the crystal structure, the intermolecular N—H···O hydrogen bonds (Table 1) link the molecules to form a supramolecular structure (Fig. 2).
For general backgroud, see: Zheng et al. (2003); Al-Talib et al. (1990); Yousif et al. (1986); Ahmad et al. (2001); Al-Soud et al. (2004); El-Emam et al. (2004); Allen et al. (1987); Furniss et al. (1978).
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1999); software used to prepare material for publication: SHELXTL.
C9H12N2O3 | F(000) = 416 |
Mr = 196.21 | Dx = 1.396 Mg m−3 Dm = 1.375 Mg m−3 Dm measured by not measured |
Monoclinic, P21/c | Melting point: 391(1) K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 13.610 (3) Å | Cell parameters from 927 reflections |
b = 8.9130 (19) Å | θ = 2.8–25.1° |
c = 7.9780 (17) Å | µ = 0.11 mm−1 |
β = 105.266 (4)° | T = 100 K |
V = 933.6 (3) Å3 | Block, colourless |
Z = 4 | 0.25 × 0.20 × 0.20 mm |
Bruker APEXII diffractometer | 2148 independent reflections |
Radiation source: fine-focus sealed tube | 1279 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.064 |
φ and ω scans | θmax = 28.3°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −15→17 |
Tmin = 0.974, Tmax = 0.979 | k = −7→11 |
5477 measured reflections | l = −10→10 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.094 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.83 | w = 1/[σ2(Fo2) + (0.035P)2] where P = (Fo2 + 2Fc2)/3 |
2148 reflections | (Δ/σ)max < 0.001 |
137 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C9H12N2O3 | V = 933.6 (3) Å3 |
Mr = 196.21 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.610 (3) Å | µ = 0.11 mm−1 |
b = 8.9130 (19) Å | T = 100 K |
c = 7.9780 (17) Å | 0.25 × 0.20 × 0.20 mm |
β = 105.266 (4)° |
Bruker APEXII diffractometer | 2148 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1279 reflections with I > 2σ(I) |
Tmin = 0.974, Tmax = 0.979 | Rint = 0.064 |
5477 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.094 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.83 | Δρmax = 0.29 e Å−3 |
2148 reflections | Δρmin = −0.23 e Å−3 |
137 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.15181 (14) | 0.9587 (2) | −0.0649 (2) | 0.0184 (4) | |
C2 | 0.19359 (15) | 0.9328 (2) | 0.1130 (2) | 0.0193 (4) | |
H2 | 0.1589 | 0.8700 | 0.1749 | 0.023* | |
C3 | 0.28501 (15) | 0.9982 (2) | 0.1984 (2) | 0.0184 (4) | |
C4 | 0.33684 (14) | 1.0898 (2) | 0.1051 (3) | 0.0193 (5) | |
C5 | 0.29693 (15) | 1.1115 (2) | −0.0706 (3) | 0.0210 (5) | |
H5 | 0.3329 | 1.1707 | −0.1339 | 0.025* | |
C6 | 0.20398 (14) | 1.0468 (2) | −0.1558 (3) | 0.0205 (5) | |
H6 | 0.1763 | 1.0633 | −0.2767 | 0.025* | |
C7 | 0.05527 (15) | 0.8802 (2) | −0.1522 (2) | 0.0188 (4) | |
C8 | 0.29096 (15) | 0.8730 (2) | 0.4659 (3) | 0.0238 (5) | |
H8A | 0.2210 | 0.9002 | 0.4646 | 0.036* | |
H8B | 0.3330 | 0.8693 | 0.5862 | 0.036* | |
H8C | 0.2912 | 0.7744 | 0.4117 | 0.036* | |
C9 | 0.48231 (15) | 1.2419 (3) | 0.1152 (3) | 0.0315 (5) | |
H9A | 0.5055 | 1.1820 | 0.0299 | 0.047* | |
H9B | 0.5414 | 1.2842 | 0.2000 | 0.047* | |
H9C | 0.4385 | 1.3235 | 0.0556 | 0.047* | |
N1 | −0.00531 (12) | 0.94684 (18) | −0.2911 (2) | 0.0200 (4) | |
H1 | 0.0109 | 1.0367 | −0.3209 | 0.024* | |
N2 | −0.09501 (13) | 0.8771 (2) | −0.3922 (2) | 0.0229 (4) | |
O1 | 0.03265 (10) | 0.75694 (15) | −0.09871 (17) | 0.0232 (3) | |
O2 | 0.33148 (10) | 0.98293 (14) | 0.37109 (16) | 0.0222 (3) | |
O3 | 0.42607 (10) | 1.14850 (14) | 0.20274 (17) | 0.0235 (4) | |
H2A | −0.0736 (16) | 0.802 (3) | −0.449 (3) | 0.040 (7)* | |
H2B | −0.1309 (18) | 0.845 (3) | −0.311 (3) | 0.053 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0218 (11) | 0.0121 (10) | 0.0222 (10) | 0.0025 (8) | 0.0076 (9) | −0.0011 (8) |
C2 | 0.0239 (11) | 0.0127 (10) | 0.0231 (11) | 0.0013 (8) | 0.0091 (9) | 0.0016 (8) |
C3 | 0.0240 (11) | 0.0141 (10) | 0.0174 (10) | 0.0032 (9) | 0.0060 (9) | −0.0015 (8) |
C4 | 0.0199 (11) | 0.0129 (10) | 0.0256 (11) | 0.0001 (8) | 0.0067 (9) | −0.0018 (8) |
C5 | 0.0244 (11) | 0.0158 (11) | 0.0243 (11) | −0.0008 (9) | 0.0088 (9) | 0.0027 (9) |
C6 | 0.0225 (11) | 0.0179 (11) | 0.0208 (10) | 0.0030 (9) | 0.0051 (9) | 0.0008 (8) |
C7 | 0.0224 (11) | 0.0151 (11) | 0.0208 (11) | 0.0018 (9) | 0.0093 (9) | −0.0024 (9) |
C8 | 0.0267 (12) | 0.0216 (12) | 0.0232 (11) | −0.0002 (9) | 0.0070 (9) | 0.0061 (9) |
C9 | 0.0248 (12) | 0.0327 (13) | 0.0353 (13) | −0.0076 (10) | 0.0048 (10) | 0.0095 (11) |
N1 | 0.0202 (9) | 0.0135 (9) | 0.0250 (9) | −0.0036 (7) | 0.0036 (8) | 0.0005 (7) |
N2 | 0.0212 (10) | 0.0203 (10) | 0.0263 (10) | −0.0020 (8) | 0.0046 (8) | −0.0035 (8) |
O1 | 0.0282 (8) | 0.0133 (7) | 0.0277 (8) | −0.0023 (6) | 0.0064 (6) | 0.0015 (6) |
O2 | 0.0266 (8) | 0.0201 (8) | 0.0185 (8) | −0.0034 (6) | 0.0036 (6) | 0.0023 (6) |
O3 | 0.0216 (8) | 0.0220 (8) | 0.0252 (8) | −0.0051 (6) | 0.0031 (6) | 0.0041 (6) |
C1—C6 | 1.385 (3) | C7—N1 | 1.334 (2) |
C1—C2 | 1.402 (2) | C8—O2 | 1.434 (2) |
C1—C7 | 1.490 (3) | C8—H8A | 0.9800 |
C2—C3 | 1.381 (3) | C8—H8B | 0.9800 |
C2—H2 | 0.9500 | C8—H8C | 0.9800 |
C3—O2 | 1.363 (2) | C9—O3 | 1.431 (2) |
C3—C4 | 1.413 (3) | C9—H9A | 0.9800 |
C4—O3 | 1.363 (2) | C9—H9B | 0.9800 |
C4—C5 | 1.377 (2) | C9—H9C | 0.9800 |
C5—C6 | 1.393 (3) | N1—N2 | 1.417 (2) |
C5—H5 | 0.9500 | N1—H1 | 0.8800 |
C6—H6 | 0.9500 | N2—H2A | 0.90 (2) |
C7—O1 | 1.247 (2) | N2—H2B | 0.95 (2) |
C6—C1—C2 | 119.75 (18) | O2—C8—H8A | 109.5 |
C6—C1—C7 | 122.13 (18) | O2—C8—H8B | 109.5 |
C2—C1—C7 | 117.97 (17) | H8A—C8—H8B | 109.5 |
C3—C2—C1 | 120.18 (18) | O2—C8—H8C | 109.5 |
C3—C2—H2 | 119.9 | H8A—C8—H8C | 109.5 |
C1—C2—H2 | 119.9 | H8B—C8—H8C | 109.5 |
O2—C3—C2 | 125.08 (17) | O3—C9—H9A | 109.5 |
O2—C3—C4 | 115.31 (17) | O3—C9—H9B | 109.5 |
C2—C3—C4 | 119.61 (18) | H9A—C9—H9B | 109.5 |
O3—C4—C5 | 125.55 (17) | O3—C9—H9C | 109.5 |
O3—C4—C3 | 114.45 (17) | H9A—C9—H9C | 109.5 |
C5—C4—C3 | 119.99 (18) | H9B—C9—H9C | 109.5 |
C4—C5—C6 | 120.17 (18) | C7—N1—N2 | 121.93 (17) |
C4—C5—H5 | 119.9 | C7—N1—H1 | 119.0 |
C6—C5—H5 | 119.9 | N2—N1—H1 | 119.0 |
C1—C6—C5 | 120.27 (19) | N1—N2—H2A | 105.5 (14) |
C1—C6—H6 | 119.9 | N1—N2—H2B | 105.3 (14) |
C5—C6—H6 | 119.9 | H2A—N2—H2B | 114.3 (19) |
O1—C7—N1 | 121.50 (18) | C3—O2—C8 | 117.45 (14) |
O1—C7—C1 | 121.37 (18) | C4—O3—C9 | 117.05 (15) |
N1—C7—C1 | 117.13 (17) | ||
C6—C1—C2—C3 | 1.8 (3) | C4—C5—C6—C1 | −0.9 (3) |
C7—C1—C2—C3 | 177.49 (17) | C6—C1—C7—O1 | 147.43 (18) |
C1—C2—C3—O2 | 178.76 (16) | C2—C1—C7—O1 | −28.1 (3) |
C1—C2—C3—C4 | −0.9 (3) | C6—C1—C7—N1 | −31.9 (3) |
O2—C3—C4—O3 | 0.3 (2) | C2—C1—C7—N1 | 152.58 (17) |
C2—C3—C4—O3 | 179.92 (17) | O1—C7—N1—N2 | −4.3 (3) |
O2—C3—C4—C5 | 179.36 (16) | C1—C7—N1—N2 | 175.03 (17) |
C2—C3—C4—C5 | −1.0 (3) | C2—C3—O2—C8 | 10.0 (3) |
O3—C4—C5—C6 | −179.15 (18) | C4—C3—O2—C8 | −170.31 (15) |
C3—C4—C5—C6 | 1.9 (3) | C5—C4—O3—C9 | 0.7 (3) |
C2—C1—C6—C5 | −1.0 (3) | C3—C4—O3—C9 | 179.77 (16) |
C7—C1—C6—C5 | −176.43 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.88 | 2.10 | 2.894 (2) | 150 |
N2—H2A···O1ii | 0.90 (2) | 2.17 (2) | 2.944 (2) | 144.0 (18) |
Symmetry codes: (i) −x, y+1/2, −z−1/2; (ii) x, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C9H12N2O3 |
Mr | 196.21 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 13.610 (3), 8.9130 (19), 7.9780 (17) |
β (°) | 105.266 (4) |
V (Å3) | 933.6 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.25 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.974, 0.979 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5477, 2148, 1279 |
Rint | 0.064 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.094, 0.83 |
No. of reflections | 2148 |
No. of parameters | 137 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.29, −0.23 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1999), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1999), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.88 | 2.10 | 2.894 (2) | 149.6 |
N2—H2A···O1ii | 0.90 (2) | 2.17 (2) | 2.944 (2) | 144.0 (18) |
Symmetry codes: (i) −x, y+1/2, −z−1/2; (ii) x, −y+3/2, z−1/2. |
Aromatic hydrazides are important intermediates in heterocyclic chemistry and have been used for the synthesis of various biologically active five-membered heterocycles such as 2,5-disubstituted-1,3,4-oxadiazoles (Zheng et al., 2003; Al-Talib et al., 1990) and 5-substituted-2-mercapto-1,3,4-oxadiazoles (Yousif et al., 1986; Ahmad et al., 2001; Al-Soud et al., 2004; El-Emam et al., 2004). In view of the versatility of these compounds, we have synthesized the title compound, (I), and reported its crystal structure.
In the molecule of the title compound, (I), (Fig. 1), the bond lengths and angles are within normal ranges (Allen et al., 1987). The dihedral angle between the planar hydrazidic group (C7/O1/N1/N2) and benzene ring (C1—C6) is 63.27 (3)°.
In the crystal structure, the intermolecular N—H···O hydrogen bonds (Table 1) link the molecules to form a supramolecular structure (Fig. 2).