Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807027651/lh2416sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807027651/lh2416Isup2.hkl |
CCDC reference: 654920
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.002 Å
- R factor = 0.044
- wR factor = 0.119
- Data-to-parameter ratio = 14.7
checkCIF/PLATON results
No syntax errors found
Alert level A DIFF020_ALERT_1_A _diffrn_standards_interval_count and _diffrn_standards_interval_time are missing. Number of measurements between standards or time (min) between standards.
Author Response: CCD detector used |
Alert level B PLAT410_ALERT_2_B Short Intra H...H Contact H2 .. H9 .. 1.83 Ang.
Alert level C PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT063_ALERT_3_C Crystal Probably too Large for Beam Size ....... 0.70 mm PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.15 PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 6
Alert level G FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the _chemical_formula_sum and _chemical_formula_moiety. This is usually due to the moiety formula being in the wrong format. Atom count from _chemical_formula_sum: C18 H21 N3 O8 Atom count from _chemical_formula_moiety:C18 H21 N2 O8 PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 13
1 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 4 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Zinc nitrate hexahydrate and 5-hydroxyisophthalic acid were obtained commercially. 4,4'-dipyridylamine was prepared via a published procedure (GET, et al., GET). A mixture of zinc nitrate hexahydrate (110 mg, 0.37 mmol), 5-hydroxyisophthalic acid (67 mg, 0.37 mmol), 4,4'-dipyridylamine (127 mg, 0.74 mmol) and 10.0 g water (550 mmol) was placed into a 23 ml Teflon-lined Parr Acid Digestion bomb, which was then heated under autogenous pressure at 393 K for 72 h. Large white rhombs of the title compound were isolated after cooling, along with an amorphous white solid.
All H atoms bound to C atoms were placed in calculated positions, with C—H = 0.95 Å and refined in riding mode with Uiso = 1.2Ueq(C). All H atoms bound to O atoms were placed in calculated positions. The H atoms bound to N and O were found via Fourier difference map, restrained with N—H = 0.85 (2) Å or O—H = 0.89 (2) Å, and refined with Uiso = 1.2Ueq(O,N).
Co-crystals of carboxylic acids and amines or imines have been the focus of recent studies in part because of potentially useful physical properties such as ferroelectricity (Horiuchi et al., 2005). Also, the stability of pharmaceutically important formulations can be increased by co-crystal formation (Trask et al., 2005). Proton transfer between carboxylic acid and pyridine components has been observed in several co-crystals, with the resulting charge-separated hydrogen bonding interactions exerting strong structure directing effects (Bhogala & Nangia, 2003).
The hydrated title salt was obtained during an attempt to synthesize a zinc-based coordination polymer containing 4,4'-dipyridylamine (dpa) and 5-hydroxyisophthalate (hip). The asymmetric unit consists of a doubly protonated [H2dpa]2+ dication, a doubly deprotonated [hip]2- anion, and three water molecules of crystallization (Fig. 1). The similar C—O bond lengths at the carboxylate termini reflect the presence of delocalized π bonds (Table 1).
Adjacent [H2dpa]2+ and [hip]2- moieties interact via N—H···O hydrogen bonding to construct undulating one-dimensional chains that course parallel to the b crystal direction. These in turn interact through O—H···O and N—H···O supramolecular interactions mediated by the amine functional group of [H2dpa]2+, the hydroxy group within [hip]2- and water molecules of crystallization to form two-dimensional layer motifs coincident with the [101] crystal planes (Fig. 2). The [H2dpa]2+ cations exhibit a slight inter-ring torsion of ~0.8° in order to maximize the supramolecular contacts. The {[H2dpa][hip].3H2O} layers subsequently stack along the (101) crystal direction through O—H···O hydrogen bonding patterns between water molecules of type O2W and O3W to create the three-dimensional structure of (I) (Fig. 3). Interlayer connectivity is enhanced by π-π stacking mechanisms and non-classical C—H···O interactions. Metrical parameters for the classical hydrogen bonding interactions are given in the table.
A salt containing monoprotonated 4,4'-dipyridylamine and singly deprotonated isophthalic acid has been previously reported (Amoore & Kepert, 2005 or??2006). In contrast to the title compound, no water molecules of crystallization were observed.
For related literature, see: Bhogala & Nangia (2003); Horiuchi et al. (2005); Trask et al. (2005); Zapf et al. (1998).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT-Plus (Bruker, 2003); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: CrystalMaker (CrystalMaker, 2005); software used to prepare material for publication: SHELXL97.
C10H11N2+·C8H4O5−·3H2O | F(000) = 856 |
Mr = 407.38 | Dx = 1.447 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 18586 reflections |
a = 7.266 (3) Å | θ = 2.5–28.2° |
b = 32.701 (12) Å | µ = 0.12 mm−1 |
c = 8.373 (3) Å | T = 293 K |
β = 109.971 (6)° | Rhomb, colourless |
V = 1869.7 (12) Å3 | 0.70 × 0.25 × 0.25 mm |
Z = 4 |
Bruker SMART 1K diffractometer | 4299 independent reflections |
Radiation source: fine-focus sealed tube | 3383 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
ω scans | θmax = 28.2°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.844, Tmax = 0.970 | k = −43→42 |
18586 measured reflections | l = −11→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0567P)2 + 0.5827P] where P = (Fo2 + 2Fc2)/3 |
4299 reflections | (Δ/σ)max < 0.001 |
292 parameters | Δρmax = 0.21 e Å−3 |
13 restraints | Δρmin = −0.23 e Å−3 |
C10H11N2+·C8H4O5−·3H2O | V = 1869.7 (12) Å3 |
Mr = 407.38 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.266 (3) Å | µ = 0.12 mm−1 |
b = 32.701 (12) Å | T = 293 K |
c = 8.373 (3) Å | 0.70 × 0.25 × 0.25 mm |
β = 109.971 (6)° |
Bruker SMART 1K diffractometer | 4299 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3383 reflections with I > 2σ(I) |
Tmin = 0.844, Tmax = 0.970 | Rint = 0.031 |
18586 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 13 restraints |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.21 e Å−3 |
4299 reflections | Δρmin = −0.23 e Å−3 |
292 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.17693 (18) | 0.21437 (3) | 0.25784 (15) | 0.0438 (3) | |
O1W | 0.1022 (2) | −0.07026 (4) | 0.21597 (15) | 0.0478 (3) | |
H1WA | 0.141 (3) | −0.0644 (6) | 0.130 (2) | 0.057* | |
H1WB | 0.056 (3) | −0.0470 (5) | 0.238 (3) | 0.057* | |
O2 | −0.08396 (17) | 0.18913 (3) | 0.05970 (14) | 0.0421 (3) | |
O2W | 0.3655 (2) | 0.26570 (5) | 0.52078 (19) | 0.0629 (4) | |
H2WA | 0.303 (3) | 0.2478 (7) | 0.447 (3) | 0.075* | |
H2WB | 0.299 (3) | 0.2692 (7) | 0.588 (3) | 0.075* | |
O3 | −0.19225 (18) | 0.03830 (3) | 0.05520 (14) | 0.0434 (3) | |
O3W | 0.5209 (2) | 0.33012 (5) | 0.3846 (2) | 0.0749 (5) | |
H3WA | 0.463 (4) | 0.3108 (7) | 0.418 (3) | 0.090* | |
H3WB | 0.643 (2) | 0.3273 (8) | 0.431 (3) | 0.090* | |
O4 | −0.0280 (2) | 0.00170 (3) | 0.28294 (16) | 0.0501 (3) | |
O5 | 0.3678 (2) | 0.10164 (4) | 0.70746 (15) | 0.0517 (4) | |
H5O | 0.410 (3) | 0.1259 (5) | 0.750 (3) | 0.062* | |
N1 | 0.3734 (2) | 0.47531 (4) | 0.61321 (16) | 0.0352 (3) | |
H1N | 0.301 (2) | 0.4950 (5) | 0.537 (2) | 0.042* | |
N2 | 0.69030 (18) | 0.39251 (4) | 0.97808 (15) | 0.0296 (3) | |
H2N | 0.754 (2) | 0.4053 (5) | 1.0786 (18) | 0.035* | |
N3 | 0.8395 (2) | 0.27018 (4) | 1.02502 (17) | 0.0379 (3) | |
H3N | 0.872 (3) | 0.2428 (5) | 1.039 (2) | 0.045* | |
C1 | 0.3611 (2) | 0.43590 (5) | 0.5722 (2) | 0.0403 (4) | |
H1 | 0.2815 | 0.4280 | 0.4639 | 0.048* | |
C2 | 0.4631 (2) | 0.40653 (5) | 0.6854 (2) | 0.0376 (4) | |
H2 | 0.4528 | 0.3791 | 0.6535 | 0.045* | |
C3 | 0.5821 (2) | 0.41810 (4) | 0.84837 (18) | 0.0274 (3) | |
C4 | 0.5959 (2) | 0.45988 (5) | 0.88553 (19) | 0.0368 (4) | |
H4 | 0.6770 | 0.4690 | 0.9914 | 0.044* | |
C5 | 0.4905 (3) | 0.48740 (5) | 0.7667 (2) | 0.0398 (4) | |
H5 | 0.5005 | 0.5151 | 0.7932 | 0.048* | |
C6 | 0.9166 (3) | 0.29658 (5) | 1.1534 (2) | 0.0434 (4) | |
H6 | 1.0078 | 0.2873 | 1.2546 | 0.052* | |
C7 | 0.8632 (3) | 0.33660 (5) | 1.1376 (2) | 0.0387 (4) | |
H7 | 0.9159 | 0.3543 | 1.2287 | 0.046* | |
C8 | 0.7285 (2) | 0.35143 (4) | 0.98427 (18) | 0.0272 (3) | |
C9 | 0.6495 (3) | 0.32274 (5) | 0.8556 (2) | 0.0418 (4) | |
H9 | 0.5574 | 0.3308 | 0.7528 | 0.050* | |
C10 | 0.7077 (3) | 0.28279 (5) | 0.8809 (2) | 0.0429 (4) | |
H10 | 0.6533 | 0.2639 | 0.7944 | 0.052* | |
C11 | 0.0241 (2) | 0.07331 (4) | 0.29357 (18) | 0.0270 (3) | |
C12 | −0.0087 (2) | 0.11074 (4) | 0.20894 (17) | 0.0268 (3) | |
H12 | −0.0965 | 0.1125 | 0.0983 | 0.032* | |
C13 | 0.0899 (2) | 0.14548 (4) | 0.28976 (17) | 0.0260 (3) | |
C14 | 0.2193 (2) | 0.14313 (5) | 0.45664 (18) | 0.0298 (3) | |
H14 | 0.2876 | 0.1662 | 0.5098 | 0.036* | |
C15 | 0.2460 (2) | 0.10607 (5) | 0.54350 (18) | 0.0324 (3) | |
C16 | 0.1486 (2) | 0.07122 (4) | 0.46149 (18) | 0.0312 (3) | |
H16 | 0.1670 | 0.0464 | 0.5193 | 0.037* | |
C17 | 0.0591 (2) | 0.18573 (4) | 0.19650 (18) | 0.0295 (3) | |
C18 | −0.0714 (2) | 0.03461 (4) | 0.20551 (19) | 0.0316 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0534 (7) | 0.0261 (6) | 0.0406 (6) | −0.0103 (5) | 0.0013 (5) | 0.0009 (5) |
O1W | 0.0707 (9) | 0.0344 (6) | 0.0330 (6) | 0.0092 (6) | 0.0108 (6) | 0.0052 (5) |
O2 | 0.0473 (7) | 0.0253 (6) | 0.0385 (6) | 0.0005 (5) | −0.0051 (5) | 0.0047 (5) |
O2W | 0.0617 (9) | 0.0714 (10) | 0.0543 (9) | −0.0202 (8) | 0.0182 (7) | −0.0257 (7) |
O3 | 0.0573 (7) | 0.0304 (6) | 0.0346 (6) | −0.0140 (5) | 0.0055 (5) | −0.0067 (4) |
O3W | 0.0541 (9) | 0.0675 (11) | 0.0819 (12) | 0.0072 (8) | −0.0040 (8) | 0.0278 (9) |
O4 | 0.0779 (9) | 0.0212 (6) | 0.0485 (7) | −0.0009 (6) | 0.0183 (6) | 0.0022 (5) |
O5 | 0.0616 (8) | 0.0461 (8) | 0.0292 (6) | −0.0090 (6) | −0.0081 (5) | 0.0076 (5) |
N1 | 0.0388 (7) | 0.0313 (7) | 0.0320 (7) | 0.0102 (6) | 0.0075 (5) | 0.0083 (5) |
N2 | 0.0344 (7) | 0.0240 (6) | 0.0253 (6) | 0.0024 (5) | 0.0038 (5) | 0.0012 (5) |
N3 | 0.0455 (8) | 0.0231 (6) | 0.0403 (7) | 0.0057 (6) | 0.0086 (6) | 0.0056 (5) |
C1 | 0.0429 (9) | 0.0384 (9) | 0.0299 (8) | 0.0056 (7) | −0.0003 (7) | 0.0015 (6) |
C2 | 0.0444 (9) | 0.0250 (8) | 0.0339 (8) | 0.0045 (6) | 0.0012 (7) | −0.0003 (6) |
C3 | 0.0278 (7) | 0.0260 (7) | 0.0282 (7) | 0.0037 (5) | 0.0090 (6) | 0.0036 (5) |
C4 | 0.0458 (9) | 0.0286 (8) | 0.0281 (7) | 0.0037 (7) | 0.0024 (6) | −0.0005 (6) |
C5 | 0.0495 (10) | 0.0264 (8) | 0.0377 (9) | 0.0071 (7) | 0.0075 (7) | 0.0015 (6) |
C6 | 0.0527 (10) | 0.0334 (9) | 0.0333 (8) | 0.0094 (7) | 0.0007 (7) | 0.0079 (6) |
C7 | 0.0495 (10) | 0.0298 (8) | 0.0282 (8) | 0.0035 (7) | 0.0020 (7) | 0.0009 (6) |
C8 | 0.0274 (7) | 0.0248 (7) | 0.0290 (7) | 0.0018 (5) | 0.0092 (6) | 0.0040 (5) |
C9 | 0.0475 (10) | 0.0300 (8) | 0.0334 (8) | 0.0060 (7) | −0.0049 (7) | 0.0007 (6) |
C10 | 0.0495 (10) | 0.0282 (8) | 0.0400 (9) | 0.0024 (7) | 0.0009 (7) | −0.0035 (7) |
C11 | 0.0299 (7) | 0.0219 (7) | 0.0288 (7) | 0.0007 (5) | 0.0098 (6) | −0.0007 (5) |
C12 | 0.0285 (7) | 0.0235 (7) | 0.0243 (7) | 0.0012 (5) | 0.0037 (5) | −0.0009 (5) |
C13 | 0.0278 (7) | 0.0223 (7) | 0.0272 (7) | 0.0018 (5) | 0.0084 (6) | −0.0008 (5) |
C14 | 0.0303 (7) | 0.0269 (7) | 0.0291 (7) | −0.0034 (6) | 0.0062 (6) | −0.0046 (5) |
C15 | 0.0324 (8) | 0.0349 (8) | 0.0249 (7) | −0.0001 (6) | 0.0034 (6) | 0.0025 (6) |
C16 | 0.0357 (8) | 0.0246 (7) | 0.0312 (8) | 0.0027 (6) | 0.0086 (6) | 0.0059 (6) |
C17 | 0.0357 (8) | 0.0211 (7) | 0.0286 (7) | 0.0009 (6) | 0.0070 (6) | −0.0016 (5) |
C18 | 0.0398 (8) | 0.0243 (7) | 0.0329 (8) | −0.0027 (6) | 0.0150 (6) | −0.0032 (6) |
O1—C17 | 1.2546 (18) | C2—H2 | 0.9300 |
O1W—H1WA | 0.878 (15) | C3—C4 | 1.397 (2) |
O1W—H1WB | 0.872 (15) | C4—C5 | 1.366 (2) |
O2—C17 | 1.2614 (18) | C4—H4 | 0.9300 |
O2W—H2WA | 0.861 (16) | C5—H5 | 0.9300 |
O2W—H2WB | 0.871 (16) | C6—C7 | 1.358 (2) |
O3—C18 | 1.2706 (19) | C6—H6 | 0.9300 |
O3W—H3WA | 0.855 (16) | C7—C8 | 1.408 (2) |
O3W—H3WB | 0.841 (17) | C7—H7 | 0.9300 |
O4—C18 | 1.2402 (19) | C8—C9 | 1.396 (2) |
O5—C15 | 1.3632 (18) | C9—C10 | 1.367 (2) |
O5—H5O | 0.882 (15) | C9—H9 | 0.9300 |
N1—C1 | 1.329 (2) | C10—H10 | 0.9300 |
N1—C5 | 1.336 (2) | C11—C16 | 1.390 (2) |
N1—H1N | 0.934 (14) | C11—C12 | 1.393 (2) |
N2—C8 | 1.3691 (19) | C11—C18 | 1.509 (2) |
N2—C3 | 1.3836 (18) | C12—C13 | 1.3895 (19) |
N2—H2N | 0.912 (14) | C12—H12 | 0.9300 |
N3—C10 | 1.325 (2) | C13—C14 | 1.395 (2) |
N3—C6 | 1.343 (2) | C13—C17 | 1.507 (2) |
N3—H3N | 0.922 (14) | C14—C15 | 1.392 (2) |
C1—C2 | 1.375 (2) | C14—H14 | 0.9300 |
C1—H1 | 0.9300 | C15—C16 | 1.393 (2) |
C2—C3 | 1.396 (2) | C16—H16 | 0.9300 |
H1WA—O1W—H1WB | 103.5 (18) | N2—C8—C9 | 127.28 (13) |
H2WA—O2W—H2WB | 107 (2) | N2—C8—C7 | 116.18 (13) |
H3WA—O3W—H3WB | 109 (2) | C9—C8—C7 | 116.53 (14) |
C15—O5—H5O | 109.3 (14) | C10—C9—C8 | 119.94 (14) |
C1—N1—C5 | 120.00 (14) | C10—C9—H9 | 120.0 |
C1—N1—H1N | 121.3 (11) | C8—C9—H9 | 120.0 |
C5—N1—H1N | 118.7 (11) | N3—C10—C9 | 121.84 (15) |
C8—N2—C3 | 132.57 (13) | N3—C10—H10 | 119.1 |
C8—N2—H2N | 112.5 (11) | C9—C10—H10 | 119.1 |
C3—N2—H2N | 114.8 (11) | C16—C11—C12 | 119.78 (13) |
C10—N3—C6 | 120.21 (14) | C16—C11—C18 | 119.01 (13) |
C10—N3—H3N | 119.6 (12) | C12—C11—C18 | 121.20 (13) |
C6—N3—H3N | 120.1 (12) | C13—C12—C11 | 120.04 (13) |
N1—C1—C2 | 121.76 (15) | C13—C12—H12 | 120.0 |
N1—C1—H1 | 119.1 | C11—C12—H12 | 120.0 |
C2—C1—H1 | 119.1 | C12—C13—C14 | 120.11 (13) |
C1—C2—C3 | 119.54 (15) | C12—C13—C17 | 120.06 (13) |
C1—C2—H2 | 120.2 | C14—C13—C17 | 119.82 (13) |
C3—C2—H2 | 120.2 | C15—C14—C13 | 119.83 (13) |
N2—C3—C2 | 126.87 (14) | C15—C14—H14 | 120.1 |
N2—C3—C4 | 115.99 (13) | C13—C14—H14 | 120.1 |
C2—C3—C4 | 117.14 (13) | O5—C15—C14 | 123.04 (14) |
C5—C4—C3 | 120.15 (14) | O5—C15—C16 | 117.08 (14) |
C5—C4—H4 | 119.9 | C14—C15—C16 | 119.87 (13) |
C3—C4—H4 | 119.9 | C11—C16—C15 | 120.28 (13) |
N1—C5—C4 | 121.35 (15) | C11—C16—H16 | 119.9 |
N1—C5—H5 | 119.3 | C15—C16—H16 | 119.9 |
C4—C5—H5 | 119.3 | O1—C17—O2 | 122.78 (13) |
N3—C6—C7 | 120.96 (15) | O1—C17—C13 | 118.67 (13) |
N3—C6—H6 | 119.5 | O2—C17—C13 | 118.55 (13) |
C7—C6—H6 | 119.5 | O4—C18—O3 | 124.50 (14) |
C6—C7—C8 | 120.46 (15) | O4—C18—C11 | 118.68 (14) |
C6—C7—H7 | 119.8 | O3—C18—C11 | 116.82 (13) |
C8—C7—H7 | 119.8 | ||
C5—N1—C1—C2 | 1.5 (3) | C16—C11—C12—C13 | 2.9 (2) |
N1—C1—C2—C3 | 0.4 (3) | C18—C11—C12—C13 | −176.23 (13) |
C8—N2—C3—C2 | 6.9 (3) | C11—C12—C13—C14 | −1.1 (2) |
C8—N2—C3—C4 | −172.55 (15) | C11—C12—C13—C17 | 178.20 (13) |
C1—C2—C3—N2 | 178.42 (15) | C12—C13—C14—C15 | −1.5 (2) |
C1—C2—C3—C4 | −2.2 (2) | C17—C13—C14—C15 | 179.22 (13) |
N2—C3—C4—C5 | −178.40 (15) | C13—C14—C15—O5 | −179.00 (14) |
C2—C3—C4—C5 | 2.1 (2) | C13—C14—C15—C16 | 2.2 (2) |
C1—N1—C5—C4 | −1.6 (3) | C12—C11—C16—C15 | −2.3 (2) |
C3—C4—C5—N1 | −0.3 (3) | C18—C11—C16—C15 | 176.95 (14) |
C10—N3—C6—C7 | −0.8 (3) | O5—C15—C16—C11 | −179.19 (14) |
N3—C6—C7—C8 | −1.4 (3) | C14—C15—C16—C11 | −0.3 (2) |
C3—N2—C8—C9 | −5.9 (3) | C12—C13—C17—O1 | −165.67 (14) |
C3—N2—C8—C7 | 173.86 (15) | C14—C13—C17—O1 | 13.6 (2) |
C6—C7—C8—N2 | −177.25 (16) | C12—C13—C17—O2 | 14.1 (2) |
C6—C7—C8—C9 | 2.5 (2) | C14—C13—C17—O2 | −166.62 (14) |
N2—C8—C9—C10 | 178.13 (16) | C16—C11—C18—O4 | −3.7 (2) |
C7—C8—C9—C10 | −1.6 (2) | C12—C11—C18—O4 | 175.53 (14) |
C6—N3—C10—C9 | 1.7 (3) | C16—C11—C18—O3 | 176.31 (14) |
C8—C9—C10—N3 | −0.5 (3) | C12—C11—C18—O3 | −4.5 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O3i | 0.88 (2) | 1.92 (2) | 2.7732 (19) | 165 (2) |
O1W—H1WB···O4 | 0.87 (2) | 1.79 (2) | 2.6661 (19) | 178 (2) |
O2W—H2WA···O1 | 0.86 (2) | 1.88 (2) | 2.7351 (18) | 170 (2) |
O2W—H2WB···O1ii | 0.87 (2) | 1.99 (2) | 2.846 (2) | 170 (2) |
O3W—H3WA···O2W | 0.86 (2) | 1.96 (2) | 2.809 (2) | 172 (3) |
O3W—H3WB···O2iii | 0.84 (2) | 1.98 (2) | 2.813 (2) | 169 (3) |
O5—H5O···O3Wii | 0.88 (2) | 1.83 (2) | 2.700 (2) | 167 (2) |
N1—H1N···O3iv | 0.93 (1) | 1.67 (2) | 2.5876 (17) | 165 (2) |
N2—H2N···O1Wv | 0.91 (1) | 1.86 (1) | 2.7712 (19) | 177 (2) |
N3—H3N···O2vi | 0.92 (1) | 1.78 (2) | 2.7034 (19) | 176 (2) |
Symmetry codes: (i) −x, −y, −z; (ii) x, −y+1/2, z+1/2; (iii) x+1, −y+1/2, z+1/2; (iv) −x, y+1/2, −z+1/2; (v) −x+1, y+1/2, −z+3/2; (vi) x+1, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H11N2+·C8H4O5−·3H2O |
Mr | 407.38 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 7.266 (3), 32.701 (12), 8.373 (3) |
β (°) | 109.971 (6) |
V (Å3) | 1869.7 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.70 × 0.25 × 0.25 |
Data collection | |
Diffractometer | Bruker SMART 1K |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.844, 0.970 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18586, 4299, 3383 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.664 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.119, 1.05 |
No. of reflections | 4299 |
No. of parameters | 292 |
No. of restraints | 13 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.21, −0.23 |
Computer programs: SMART (Bruker, 2001), SAINT-Plus (Bruker, 2003), SAINT-Plus, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), CrystalMaker (CrystalMaker, 2005), SHELXL97.
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O3i | 0.878 (15) | 1.917 (16) | 2.7732 (19) | 164.8 (19) |
O1W—H1WB···O4 | 0.872 (15) | 1.794 (15) | 2.6661 (19) | 178 (2) |
O2W—H2WA···O1 | 0.861 (16) | 1.883 (16) | 2.7351 (18) | 170 (2) |
O2W—H2WB···O1ii | 0.871 (16) | 1.985 (16) | 2.846 (2) | 170 (2) |
O3W—H3WA···O2W | 0.855 (16) | 1.960 (17) | 2.809 (2) | 172 (3) |
O3W—H3WB···O2iii | 0.841 (17) | 1.984 (18) | 2.813 (2) | 169 (3) |
O5—H5O···O3Wii | 0.882 (15) | 1.834 (16) | 2.700 (2) | 167 (2) |
N1—H1N···O3iv | 0.934 (14) | 1.674 (15) | 2.5876 (17) | 164.9 (17) |
N2—H2N···O1Wv | 0.912 (14) | 1.860 (14) | 2.7712 (19) | 176.5 (16) |
N3—H3N···O2vi | 0.922 (14) | 1.783 (15) | 2.7034 (19) | 175.6 (18) |
Symmetry codes: (i) −x, −y, −z; (ii) x, −y+1/2, z+1/2; (iii) x+1, −y+1/2, z+1/2; (iv) −x, y+1/2, −z+1/2; (v) −x+1, y+1/2, −z+3/2; (vi) x+1, y, z+1. |
Co-crystals of carboxylic acids and amines or imines have been the focus of recent studies in part because of potentially useful physical properties such as ferroelectricity (Horiuchi et al., 2005). Also, the stability of pharmaceutically important formulations can be increased by co-crystal formation (Trask et al., 2005). Proton transfer between carboxylic acid and pyridine components has been observed in several co-crystals, with the resulting charge-separated hydrogen bonding interactions exerting strong structure directing effects (Bhogala & Nangia, 2003).
The hydrated title salt was obtained during an attempt to synthesize a zinc-based coordination polymer containing 4,4'-dipyridylamine (dpa) and 5-hydroxyisophthalate (hip). The asymmetric unit consists of a doubly protonated [H2dpa]2+ dication, a doubly deprotonated [hip]2- anion, and three water molecules of crystallization (Fig. 1). The similar C—O bond lengths at the carboxylate termini reflect the presence of delocalized π bonds (Table 1).
Adjacent [H2dpa]2+ and [hip]2- moieties interact via N—H···O hydrogen bonding to construct undulating one-dimensional chains that course parallel to the b crystal direction. These in turn interact through O—H···O and N—H···O supramolecular interactions mediated by the amine functional group of [H2dpa]2+, the hydroxy group within [hip]2- and water molecules of crystallization to form two-dimensional layer motifs coincident with the [101] crystal planes (Fig. 2). The [H2dpa]2+ cations exhibit a slight inter-ring torsion of ~0.8° in order to maximize the supramolecular contacts. The {[H2dpa][hip].3H2O} layers subsequently stack along the (101) crystal direction through O—H···O hydrogen bonding patterns between water molecules of type O2W and O3W to create the three-dimensional structure of (I) (Fig. 3). Interlayer connectivity is enhanced by π-π stacking mechanisms and non-classical C—H···O interactions. Metrical parameters for the classical hydrogen bonding interactions are given in the table.