Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S160053680704425X/lw2030sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S160053680704425X/lw2030Isup2.hkl |
CCDC reference: 642734
Key indicators
- Single-crystal X-ray study
- T = 120 K
- R factor = 0.046
- wR factor = 0.114
- Data-to-parameter ratio = 14.4
checkCIF/PLATON results
No syntax errors found No errors found in this datablock
4-nitrophenol (2.00 g, 0.01438 mol) was treated with a base K2CO3 (2.38 g, 0.01725 mol) in the presence of solvent DMF (15 ml) for 1 h at 70°C. The reaction mixture was cooled to room temperature and benzyl bromide (2.70 g, 0.015 mol) was added slowly and stirred at room temperature for 45 min. The reaction mixture was poured in to water (50 ml) and extracted with ethyl acetate (3 x 20 ml). Combined organic layer was washed with water (3 x 10 ml) dried with anhydrous Na2SO4 and concentrated in a rotavap to get solid (3.10 g) in 95% yield. The compound was recrystallized from ethyl alcohol.
All H atoms were positioned geometrically and were refined using a riding model. C—H distance is 0.93–0.97%/A with Uiso(H)=1.5Ueq.
Benzyl ethers and their derivatives are used as protecting group (Sharma et al., 2004) for alcohols and phenols in the synthesis of natural products (Evans et al., 2002). The title compound, a benzylether derivative, is an important intermediate in the synthesis of biologically active compounds such as irreversible inhibitors of tyrosine kinases (James, 2003). Similarly several nitro compounds are known to show anti-bacterial and other biological activity (Baker et al., 2000). During the course of synthesis of some biologically active compounds, we were interested in making use of 1-benzyloxy-4-nitrobenzene as an important intermediate.
There are at least two literature report on the preparation of the title compound (Bridges, 2003). However these methods involve use of expensive starting materials such as 1-fluoro-4-nitrobenzene and benzyl alcohol. We have developed a new and simple method for the synthesis of the title compound using readily available starting material 4-nitrophenol and benzylbromide. The title compound was obtained in very high yield compared to previously reported methods. The compound was recrystallized from ethyl alcohol. The title compound is shown in Fig 1.
The weak C—H···π interactions involving the benzyloxy group of hydrogen atoms of H8A & H11 [C8—H8A···Bz = 3.4327 (17) Å; C11—H11···Bz = 3.5547 (17) Å and 148° & 143°] stabilize the crystal structure.
For related literature, see: Baker et al. (2000); Bridges (2003); Evans et al. (2002); James (2003); Sharma et al. (2004).
Data collection: SMART (Bruker, 2001); cell refinement: SMART (Bruker, 2001); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: PLATON (Spek, 2003).
C13H11NO3 | F(000) = 480 |
Mr = 229.23 | Dx = 1.342 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 14.0913 (18) Å | θ = 1.5–26.0° |
b = 10.7640 (14) Å | µ = 0.10 mm−1 |
c = 7.6056 (10) Å | T = 120 K |
β = 100.349 (2)° | Sheet, colorless |
V = 1134.8 (3) Å3 | 0.27 × 0.10 × 0.07 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 1747 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.021 |
Graphite monochromator | θmax = 26.0°, θmin = 1.5° |
φ & ω scans | h = −17→17 |
6209 measured reflections | k = −13→12 |
2221 independent reflections | l = −7→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0486P)2 + 0.2657P] where P = (Fo2 + 2Fc2)/3 |
2221 reflections | (Δ/σ)max = 0.001 |
154 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
C13H11NO3 | V = 1134.8 (3) Å3 |
Mr = 229.23 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.0913 (18) Å | µ = 0.10 mm−1 |
b = 10.7640 (14) Å | T = 120 K |
c = 7.6056 (10) Å | 0.27 × 0.10 × 0.07 mm |
β = 100.349 (2)° |
Bruker SMART CCD area-detector diffractometer | 1747 reflections with I > 2σ(I) |
6209 measured reflections | Rint = 0.021 |
2221 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.15 e Å−3 |
2221 reflections | Δρmin = −0.17 e Å−3 |
154 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All e.s.d.'s are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | −0.04574 (11) | 0.20677 (18) | 0.4021 (3) | 0.1064 (8) | |
O2 | −0.05990 (11) | 0.02631 (18) | 0.2800 (3) | 0.1123 (8) | |
O3 | 0.37607 (8) | 0.13805 (10) | 0.28478 (15) | 0.0479 (4) | |
N1 | −0.01246 (12) | 0.11769 (19) | 0.3344 (3) | 0.0773 (8) | |
C2 | 0.08975 (12) | 0.12064 (18) | 0.3181 (3) | 0.0544 (6) | |
C3 | 0.14322 (13) | 0.22473 (17) | 0.3745 (3) | 0.0556 (6) | |
C4 | 0.23923 (12) | 0.22642 (16) | 0.3611 (2) | 0.0502 (6) | |
C5 | 0.28081 (11) | 0.12556 (14) | 0.2906 (2) | 0.0403 (5) | |
C6 | 0.22564 (12) | 0.02160 (16) | 0.2337 (2) | 0.0507 (6) | |
C7 | 0.12917 (13) | 0.01972 (17) | 0.2477 (3) | 0.0580 (7) | |
C8 | 0.42374 (11) | 0.03767 (15) | 0.2114 (2) | 0.0464 (5) | |
C9 | 0.52496 (11) | 0.07715 (14) | 0.2045 (2) | 0.0396 (5) | |
C10 | 0.54179 (11) | 0.18143 (14) | 0.1078 (2) | 0.0439 (5) | |
C11 | 0.63458 (12) | 0.21673 (16) | 0.0975 (2) | 0.0491 (6) | |
C12 | 0.71203 (12) | 0.14829 (17) | 0.1832 (2) | 0.0522 (6) | |
C13 | 0.69640 (12) | 0.04353 (17) | 0.2779 (2) | 0.0516 (6) | |
C14 | 0.60320 (12) | 0.00838 (15) | 0.2882 (2) | 0.0469 (6) | |
H3 | 0.11500 | 0.29260 | 0.42080 | 0.0670* | |
H4 | 0.27660 | 0.29580 | 0.39960 | 0.0600* | |
H6 | 0.25330 | −0.04630 | 0.18640 | 0.0610* | |
H7 | 0.09130 | −0.04930 | 0.20970 | 0.0700* | |
H8A | 0.38980 | 0.01780 | 0.09210 | 0.0560* | |
H8B | 0.42430 | −0.03570 | 0.28550 | 0.0560* | |
H10 | 0.49000 | 0.22800 | 0.04950 | 0.0530* | |
H11 | 0.64510 | 0.28700 | 0.03250 | 0.0590* | |
H12 | 0.77460 | 0.17280 | 0.17690 | 0.0630* | |
H13 | 0.74840 | −0.00340 | 0.33470 | 0.0620* | |
H14 | 0.59290 | −0.06240 | 0.35230 | 0.0560* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0582 (10) | 0.1091 (14) | 0.1601 (18) | 0.0135 (9) | 0.0413 (10) | −0.0171 (12) |
O2 | 0.0469 (9) | 0.1010 (13) | 0.190 (2) | −0.0160 (9) | 0.0236 (11) | −0.0177 (13) |
O3 | 0.0399 (6) | 0.0478 (7) | 0.0588 (7) | −0.0044 (5) | 0.0161 (5) | −0.0123 (5) |
N1 | 0.0436 (10) | 0.0806 (13) | 0.1084 (16) | 0.0035 (9) | 0.0152 (10) | 0.0036 (11) |
C2 | 0.0371 (9) | 0.0631 (11) | 0.0637 (12) | 0.0014 (8) | 0.0106 (8) | 0.0066 (9) |
C3 | 0.0493 (10) | 0.0578 (11) | 0.0622 (12) | 0.0061 (9) | 0.0167 (8) | −0.0050 (9) |
C4 | 0.0482 (10) | 0.0492 (10) | 0.0547 (10) | −0.0043 (8) | 0.0131 (8) | −0.0076 (8) |
C5 | 0.0380 (8) | 0.0446 (9) | 0.0385 (9) | −0.0012 (7) | 0.0075 (7) | 0.0013 (7) |
C6 | 0.0457 (10) | 0.0447 (9) | 0.0622 (11) | −0.0006 (7) | 0.0111 (8) | −0.0044 (8) |
C7 | 0.0441 (10) | 0.0522 (11) | 0.0765 (13) | −0.0085 (8) | 0.0075 (9) | −0.0009 (9) |
C8 | 0.0436 (9) | 0.0414 (9) | 0.0558 (10) | −0.0004 (7) | 0.0131 (8) | −0.0070 (7) |
C9 | 0.0407 (8) | 0.0396 (8) | 0.0390 (8) | 0.0005 (7) | 0.0088 (7) | −0.0056 (7) |
C10 | 0.0441 (9) | 0.0400 (8) | 0.0475 (9) | 0.0062 (7) | 0.0077 (7) | 0.0000 (7) |
C11 | 0.0549 (10) | 0.0416 (9) | 0.0539 (10) | −0.0047 (8) | 0.0180 (8) | −0.0002 (8) |
C12 | 0.0400 (9) | 0.0588 (11) | 0.0595 (11) | −0.0055 (8) | 0.0139 (8) | −0.0128 (9) |
C13 | 0.0423 (9) | 0.0562 (10) | 0.0537 (11) | 0.0100 (8) | 0.0013 (8) | −0.0053 (8) |
C14 | 0.0523 (10) | 0.0424 (9) | 0.0460 (10) | 0.0039 (7) | 0.0086 (8) | 0.0033 (7) |
O1—N1 | 1.221 (3) | C11—C12 | 1.380 (2) |
O2—N1 | 1.219 (3) | C12—C13 | 1.377 (2) |
O3—C5 | 1.358 (2) | C13—C14 | 1.382 (2) |
O3—C8 | 1.4370 (19) | C3—H3 | 0.9307 |
N1—C2 | 1.468 (2) | C4—H4 | 0.9302 |
C2—C3 | 1.375 (3) | C6—H6 | 0.9305 |
C2—C7 | 1.372 (3) | C7—H7 | 0.9300 |
C3—C4 | 1.375 (3) | C8—H8A | 0.9705 |
C4—C5 | 1.386 (2) | C8—H8B | 0.9694 |
C5—C6 | 1.387 (2) | C10—H10 | 0.9296 |
C6—C7 | 1.383 (3) | C11—H11 | 0.9300 |
C8—C9 | 1.498 (2) | C12—H12 | 0.9298 |
C9—C10 | 1.386 (2) | C13—H13 | 0.9300 |
C9—C14 | 1.384 (2) | C14—H14 | 0.9298 |
C10—C11 | 1.377 (2) | ||
O1···H3 | 2.4266 | H3···O1 | 2.4266 |
O1···H12i | 2.8140 | H4···C13vii | 3.0434 |
O1···H7ii | 2.7988 | H4···C5iv | 3.0822 |
O2···H7 | 2.4284 | H6···C8 | 2.5411 |
O2···H12i | 2.8077 | H6···H8A | 2.2772 |
O2···H13i | 2.8242 | H6···H8B | 2.3947 |
O3···H10 | 2.7837 | H7···O2 | 2.4284 |
O3···H14iii | 2.8354 | H7···O1ix | 2.7988 |
O3···H10iv | 2.7475 | H8A···C6 | 2.7217 |
C4···C5iv | 3.587 (2) | H8A···H6 | 2.2772 |
C5···C4v | 3.587 (2) | H8A···C9vi | 2.9240 |
C8···C10vi | 3.481 (2) | H8A···C10vi | 2.8924 |
C8···C9vi | 3.588 (2) | H8A···C11vi | 2.8970 |
C9···C9vi | 3.485 (2) | H8A···C12vi | 2.9257 |
C9···C8vi | 3.588 (2) | H8A···C13vi | 2.9329 |
C10···C8vi | 3.481 (2) | H8A···C14vi | 2.9254 |
C5···H4v | 3.0822 | H8B···C6 | 2.8242 |
C5···H14iii | 3.0445 | H8B···H6 | 2.3947 |
C6···H8B | 2.8242 | H8B···H14 | 2.3561 |
C6···H8A | 2.7217 | H8B···C11viii | 2.9744 |
C8···H6 | 2.5411 | H10···O3 | 2.7837 |
C9···H8Avi | 2.9240 | H10···O3v | 2.7475 |
C10···H8Avi | 2.8924 | H11···C12v | 3.0549 |
C11···H8Bvii | 2.9744 | H11···C13v | 2.8465 |
C11···H8Avi | 2.8970 | H11···C14v | 2.8737 |
C12···H8Avi | 2.9257 | H12···O1x | 2.8140 |
C12···H11iv | 3.0549 | H12···O2x | 2.8077 |
C13···H4viii | 3.0434 | H13···O2x | 2.8242 |
C13···H8Avi | 2.9329 | H14···H8B | 2.3561 |
C13···H11iv | 2.8465 | H14···O3iii | 2.8354 |
C14···H8Avi | 2.9254 | H14···C5iii | 3.0445 |
C14···H11iv | 2.8737 | ||
C5—O3—C8 | 118.17 (12) | C2—C3—H3 | 120.68 |
O1—N1—O2 | 123.23 (18) | C4—C3—H3 | 120.71 |
O1—N1—C2 | 118.40 (18) | C3—C4—H4 | 119.75 |
O2—N1—C2 | 118.38 (19) | C5—C4—H4 | 119.72 |
N1—C2—C3 | 118.83 (18) | C5—C6—H6 | 120.28 |
N1—C2—C7 | 119.21 (17) | C7—C6—H6 | 120.28 |
C3—C2—C7 | 121.96 (17) | C2—C7—H7 | 120.26 |
C2—C3—C4 | 118.62 (17) | C6—C7—H7 | 120.33 |
C3—C4—C5 | 120.54 (16) | O3—C8—H8A | 110.04 |
O3—C5—C4 | 115.09 (14) | O3—C8—H8B | 110.02 |
O3—C5—C6 | 124.88 (14) | C9—C8—H8A | 110.01 |
C4—C5—C6 | 120.03 (15) | C9—C8—H8B | 110.06 |
C5—C6—C7 | 119.45 (16) | H8A—C8—H8B | 108.37 |
C2—C7—C6 | 119.41 (17) | C9—C10—H10 | 119.70 |
O3—C8—C9 | 108.34 (12) | C11—C10—H10 | 119.74 |
C8—C9—C10 | 120.21 (14) | C10—C11—H11 | 119.88 |
C8—C9—C14 | 121.12 (14) | C12—C11—H11 | 119.83 |
C10—C9—C14 | 118.63 (15) | C11—C12—H12 | 120.08 |
C9—C10—C11 | 120.56 (15) | C13—C12—H12 | 120.11 |
C10—C11—C12 | 120.29 (15) | C12—C13—H13 | 120.07 |
C11—C12—C13 | 119.81 (16) | C14—C13—H13 | 120.15 |
C12—C13—C14 | 119.78 (16) | C9—C14—H14 | 119.52 |
C9—C14—C13 | 120.92 (15) | C13—C14—H14 | 119.56 |
C8—O3—C5—C4 | −179.30 (13) | C4—C5—C6—C7 | 0.1 (2) |
C8—O3—C5—C6 | 1.2 (2) | O3—C5—C6—C7 | 179.55 (16) |
C5—O3—C8—C9 | 175.12 (12) | C5—C6—C7—C2 | −0.2 (3) |
O2—N1—C2—C3 | 178.2 (2) | O3—C8—C9—C10 | −58.81 (18) |
O1—N1—C2—C3 | −1.9 (3) | O3—C8—C9—C14 | 123.63 (15) |
O2—N1—C2—C7 | −2.0 (3) | C8—C9—C10—C11 | −178.53 (14) |
O1—N1—C2—C7 | 177.9 (2) | C10—C9—C14—C13 | 0.8 (2) |
C7—C2—C3—C4 | −0.7 (3) | C14—C9—C10—C11 | −0.9 (2) |
N1—C2—C3—C4 | 179.17 (19) | C8—C9—C14—C13 | 178.44 (14) |
N1—C2—C7—C6 | −179.37 (19) | C9—C10—C11—C12 | 0.2 (2) |
C3—C2—C7—C6 | 0.5 (3) | C10—C11—C12—C13 | 0.7 (2) |
C2—C3—C4—C5 | 0.6 (3) | C11—C12—C13—C14 | −0.7 (2) |
C3—C4—C5—C6 | −0.3 (2) | C12—C13—C14—C9 | 0.0 (2) |
C3—C4—C5—O3 | −179.81 (16) |
Symmetry codes: (i) x−1, y, z; (ii) −x, y+1/2, −z+1/2; (iii) −x+1, −y, −z+1; (iv) x, −y+1/2, z+1/2; (v) x, −y+1/2, z−1/2; (vi) −x+1, −y, −z; (vii) −x+1, y+1/2, −z+1/2; (viii) −x+1, y−1/2, −z+1/2; (ix) −x, y−1/2, −z+1/2; (x) x+1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8A···Cg2vi | 0.95 | 2.57 | 3.4323 (17) | 148 |
C11—H11···Cg2v | 0.95 | 2.76 | 3.5547 (17) | 143 |
Symmetry codes: (v) x, −y+1/2, z−1/2; (vi) −x+1, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | C13H11NO3 |
Mr | 229.23 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 120 |
a, b, c (Å) | 14.0913 (18), 10.7640 (14), 7.6056 (10) |
β (°) | 100.349 (2) |
V (Å3) | 1134.8 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.27 × 0.10 × 0.07 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6209, 2221, 1747 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.618 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.114, 1.02 |
No. of reflections | 2221 |
No. of parameters | 154 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.17 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2003).
O1—N1 | 1.221 (3) | O3—C8 | 1.4370 (19) |
O2—N1 | 1.219 (3) | N1—C2 | 1.468 (2) |
O3—C5 | 1.358 (2) | ||
C5—O3—C8 | 118.17 (12) | N1—C2—C7 | 119.21 (17) |
O1—N1—O2 | 123.23 (18) | O3—C5—C4 | 115.09 (14) |
O1—N1—C2 | 118.40 (18) | O3—C5—C6 | 124.88 (14) |
O2—N1—C2 | 118.38 (19) | O3—C8—C9 | 108.34 (12) |
N1—C2—C3 | 118.83 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8A···Cg2i | 0.95 | 2.569 | 3.4323 (17) | 148 |
C11—H11···Cg2ii | 0.95 | 2.761 | 3.5547 (17) | 143 |
Symmetry codes: (i) −x+1, −y, −z; (ii) x, −y+1/2, z−1/2. |
Benzyl ethers and their derivatives are used as protecting group (Sharma et al., 2004) for alcohols and phenols in the synthesis of natural products (Evans et al., 2002). The title compound, a benzylether derivative, is an important intermediate in the synthesis of biologically active compounds such as irreversible inhibitors of tyrosine kinases (James, 2003). Similarly several nitro compounds are known to show anti-bacterial and other biological activity (Baker et al., 2000). During the course of synthesis of some biologically active compounds, we were interested in making use of 1-benzyloxy-4-nitrobenzene as an important intermediate.
There are at least two literature report on the preparation of the title compound (Bridges, 2003). However these methods involve use of expensive starting materials such as 1-fluoro-4-nitrobenzene and benzyl alcohol. We have developed a new and simple method for the synthesis of the title compound using readily available starting material 4-nitrophenol and benzylbromide. The title compound was obtained in very high yield compared to previously reported methods. The compound was recrystallized from ethyl alcohol. The title compound is shown in Fig 1.
The weak C—H···π interactions involving the benzyloxy group of hydrogen atoms of H8A & H11 [C8—H8A···Bz = 3.4327 (17) Å; C11—H11···Bz = 3.5547 (17) Å and 148° & 143°] stabilize the crystal structure.