supplementary materials


is2267 scheme

Acta Cryst. (2008). E64, o349    [ doi:10.1107/S1600536807067487 ]

4-(4-Chlorophenyl)-5-[1-(4-chlorophenyl)-2-methyl-2-nitropropyl]-1,2,3-selenadiazole

A. Marx, S. Saravanan, S. Muthusubramanian, V. Manivannan and N. P. Rath

Abstract top

In the title compound, C18H15Cl2N3O2Se, the selenadiazole ring makes dihedral angles of 49.87 (3) and 55.70 (3)° with the two benzene rings. The dihedral angle between the two benzene rings is 11.90 (5)°. In the crystal structure, intramolecular C-H...O and C-H...Se interactions and intermolecular C-H...O, C-H...Cl and C-H...N interactions are observed.

Comment top

Selenium containing compounds like 1,2,3-selenadiazole possess various beneficial activities like antifungal (Kuroda et al., 2001), antibacterial (El-Kashef et al., 1986), antimicrobial (El-Bahaie et al., 1990) and insecticidal (Padmavathi et al., 2002) activities. As naturally occurring nitro compounds exhibit broad antibiotic activity and certain alkyl nitro compounds exhibit antitumor activity, it was decided to synthesize and structurally characterize a set of 1,2,3-selenadiazoles with nitro group in the side chain (Saravanan et al., 2006).

The geometric parameters in the compound, (I) agree with the reported values of similar structure (Mellini & Merlino, 1976a,b; Bertini et al., 1984; Gunasekaran et al., 2007). The C3—C8 benzene ring makes a dihedral angle of 49.87 (3)° with the heterocyclic ring and the C10—C15 benzene ring makes a dihedral angle of 55.70 (3)° with the heterocyclic ring (Fig. 1).

The details of the hydrogen bonding are given in Table 1. The molecular structure is stabilized by weak intramolecular C—H···O and C—H···Se interactions and the crystal packing is stabilized by weak intermolecular C—H···O, C—H···Cl and C—H···N interactions (Fig. 2).

Related literature top

For related literature, see: Bertini et al. (1984); El-Bahaie et al. (1990); El-Kashef et al. (1986); Kuroda et al. (2001); Mellini & Merlino (1976a,b); Padmavathi et al. (2002); Saravanan et al. (2006). A similar compound with a chlorophenyl ring has been reported recently (Gunasekaran et al., 2007).

Experimental top

A solution of 2-[1,3-bis(4-chlorophenyl)-4-methyl-4-nitropentylidene]-1-hydrazine carboxamide (0.005 mol) and powdered selenium dioxide (0.05 mol) in dry THF was gently heated on a water bath for 2 h. The selenium deposited on cooling was removed by filtration, and the filtrate was poured into crushed ice, extracted with chloroform, and purified by column chromatography using silica gel (60–120 mesh) with 97:3 petroleum ether: ethyl acetate as eluent to give 4-(4-chlorophenyl)-5-[1-(4-chlorophenyl)-2-methyl-2- nitropropyl]-1,2,3-selenadiazole. Solvent used for crystallization is ethanol.

Refinement top

H atoms were positioned geometrically and refined using riding model, with C—H = 0.95 Å and Uiso(H) = 1.2Ueq(C) for aromatic C—H, C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C) for CH3, C—H = 1.00 Å and Uiso(H) = 1.2Ueq(C) for CH.

Computing details top

Data collection: APEX2 (Bruker, 2004); cell refinement: APEX2 (Bruker, 2004); data reduction: APEX2 (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).

Figures top
[Figure 1] Fig. 1. The molecular structure of (I), with atom labels and 50% probability displacement ellipsoids for non-H atoms.
[Figure 2] Fig. 2. The packing of (I), viewed down the b axis. Hydrogen bonds are shown as dashed lines. H atoms not involved in hydrogen bonding have been omitted.
4-(4-Chlorophenyl)-5-[1-(4-chlorophenyl)-2-methyl-2-nitropropyl]-1,2,3- selenadiazole top
Crystal data top
C18H15Cl2N3O2SeZ = 2
Mr = 455.19F000 = 456
Triclinic, P1Dx = 1.592 Mg m3
Hall symbol: -P 1Mo Kα radiation
λ = 0.71073 Å
a = 7.8352 (2) ÅCell parameters from 8302 reflections
b = 10.9208 (3) Åθ = 2.7–34.5º
c = 11.5507 (3) ŵ = 2.28 mm1
α = 75.381 (1)ºT = 100 (2) K
β = 89.044 (1)ºRectangular, colourless
γ = 83.331 (1)º0.33 × 0.18 × 0.17 mm
V = 949.80 (4) Å3
Data collection top
Bruker Kappa-APEXII
diffractometer
9335 independent reflections
Radiation source: fine-focus sealed tube8074 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.028
T = 100(2) Kθmax = 36.7º
ω and φ scansθmin = 1.8º
Absorption correction: multi-scan
(SADABS; Bruker, 2004)
h = 13→13
Tmin = 0.507, Tmax = 0.679k = 18→18
44785 measured reflectionsl = 19→19
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.026H-atom parameters constrained
wR(F2) = 0.064  w = 1/[σ2(Fo2) + (0.031P)2 + 0.2243P]
where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
9335 reflectionsΔρmax = 0.57 e Å3
237 parametersΔρmin = 0.59 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Crystal data top
C18H15Cl2N3O2Seγ = 83.331 (1)º
Mr = 455.19V = 949.80 (4) Å3
Triclinic, P1Z = 2
a = 7.8352 (2) ÅMo Kα
b = 10.9208 (3) ŵ = 2.28 mm1
c = 11.5507 (3) ÅT = 100 (2) K
α = 75.381 (1)º0.33 × 0.18 × 0.17 mm
β = 89.044 (1)º
Data collection top
Bruker Kappa-APEXII
diffractometer
9335 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2004)
8074 reflections with I > 2σ(I)
Tmin = 0.507, Tmax = 0.679Rint = 0.028
44785 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.026237 parameters
wR(F2) = 0.064H-atom parameters constrained
S = 1.03Δρmax = 0.57 e Å3
9335 reflectionsΔρmin = 0.59 e Å3
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Se10.135681 (12)0.147694 (9)0.433060 (8)0.01400 (3)
Cl10.22480 (5)0.30162 (4)0.32615 (2)0.03885 (8)
Cl20.23404 (5)0.83872 (3)0.28700 (3)0.03592 (8)
O10.76068 (10)0.34633 (8)0.28931 (8)0.02212 (15)
O20.67115 (11)0.31526 (8)0.12446 (7)0.02317 (16)
N10.02318 (11)0.07149 (8)0.36434 (7)0.01542 (14)
N20.01345 (10)0.10161 (8)0.25070 (7)0.01371 (13)
N30.66526 (11)0.30096 (8)0.23302 (8)0.01522 (14)
C10.10681 (11)0.18154 (8)0.20053 (8)0.01114 (14)
C20.20509 (11)0.21946 (8)0.27992 (8)0.01124 (14)
C30.12393 (12)0.21352 (9)0.06915 (8)0.01239 (14)
C40.14006 (15)0.11629 (10)0.00999 (9)0.01870 (18)
H40.13260.03090.05390.022*
C50.16690 (16)0.14320 (11)0.11262 (9)0.0233 (2)
H50.17710.07710.15310.028*
C60.17854 (15)0.26821 (12)0.17466 (9)0.0219 (2)
C70.15700 (15)0.36712 (10)0.11909 (9)0.02036 (19)
H70.16120.45260.16370.024*
C80.12902 (13)0.33887 (9)0.00348 (8)0.01577 (16)
H80.11320.40580.04290.019*
C90.35407 (11)0.29627 (8)0.24434 (8)0.01096 (13)
H90.36640.30570.15630.013*
C100.32202 (12)0.43177 (9)0.25869 (8)0.01282 (14)
C110.35859 (14)0.53150 (9)0.16337 (9)0.01794 (17)
H110.40160.51330.09140.022*
C120.33342 (17)0.65705 (10)0.17148 (10)0.0229 (2)
H120.35860.72440.10590.027*
C130.27108 (16)0.68213 (10)0.27660 (10)0.0217 (2)
C140.23240 (16)0.58569 (10)0.37302 (10)0.0226 (2)
H140.18950.60450.44480.027*
C150.25739 (15)0.46091 (10)0.36297 (9)0.01862 (18)
H150.22990.39410.42840.022*
C160.52730 (12)0.22146 (9)0.30124 (8)0.01257 (14)
C170.55570 (13)0.09225 (9)0.27148 (10)0.01807 (17)
H17A0.67220.05200.29610.027*
H17B0.54120.10410.18510.027*
H17C0.47190.03770.31420.027*
C180.55381 (13)0.20944 (10)0.43339 (9)0.01800 (17)
H18A0.47040.15690.47950.027*
H18B0.53750.29430.44870.027*
H18C0.67060.16940.45750.027*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Se10.01575 (4)0.01765 (5)0.00888 (4)0.00696 (3)0.00236 (3)0.00175 (3)
Cl10.0533 (2)0.0539 (2)0.01020 (10)0.01394 (17)0.00528 (11)0.00641 (12)
Cl20.0664 (2)0.01200 (10)0.02912 (14)0.00353 (12)0.01822 (14)0.00708 (10)
O10.0197 (3)0.0181 (3)0.0286 (4)0.0094 (3)0.0035 (3)0.0024 (3)
O20.0213 (4)0.0293 (4)0.0161 (3)0.0055 (3)0.0053 (3)0.0003 (3)
N10.0150 (3)0.0163 (3)0.0150 (3)0.0058 (3)0.0021 (3)0.0024 (3)
N20.0135 (3)0.0140 (3)0.0138 (3)0.0042 (3)0.0012 (2)0.0027 (3)
N30.0130 (3)0.0131 (3)0.0177 (3)0.0032 (3)0.0011 (3)0.0003 (3)
C10.0116 (3)0.0109 (3)0.0108 (3)0.0018 (3)0.0004 (3)0.0022 (3)
C20.0123 (3)0.0116 (3)0.0095 (3)0.0024 (3)0.0007 (3)0.0017 (3)
C30.0143 (4)0.0128 (4)0.0102 (3)0.0031 (3)0.0005 (3)0.0025 (3)
C40.0277 (5)0.0149 (4)0.0149 (4)0.0051 (4)0.0010 (3)0.0050 (3)
C50.0345 (6)0.0236 (5)0.0146 (4)0.0046 (4)0.0005 (4)0.0094 (4)
C60.0267 (5)0.0298 (5)0.0097 (4)0.0075 (4)0.0004 (3)0.0042 (3)
C70.0276 (5)0.0191 (4)0.0130 (4)0.0084 (4)0.0025 (3)0.0010 (3)
C80.0214 (4)0.0132 (4)0.0123 (4)0.0033 (3)0.0020 (3)0.0017 (3)
C90.0124 (3)0.0111 (3)0.0092 (3)0.0030 (3)0.0004 (3)0.0016 (3)
C100.0156 (4)0.0110 (3)0.0113 (3)0.0024 (3)0.0012 (3)0.0013 (3)
C110.0264 (5)0.0128 (4)0.0137 (4)0.0052 (3)0.0011 (3)0.0006 (3)
C120.0365 (6)0.0120 (4)0.0186 (4)0.0052 (4)0.0042 (4)0.0003 (3)
C130.0328 (6)0.0111 (4)0.0212 (5)0.0001 (4)0.0095 (4)0.0044 (3)
C140.0352 (6)0.0155 (4)0.0178 (4)0.0002 (4)0.0016 (4)0.0068 (3)
C150.0285 (5)0.0138 (4)0.0134 (4)0.0028 (4)0.0017 (3)0.0031 (3)
C160.0122 (3)0.0118 (3)0.0133 (3)0.0045 (3)0.0007 (3)0.0011 (3)
C170.0155 (4)0.0130 (4)0.0259 (5)0.0022 (3)0.0007 (3)0.0049 (3)
C180.0172 (4)0.0223 (5)0.0127 (4)0.0040 (3)0.0029 (3)0.0003 (3)
Geometric parameters (Å, °) top
Se1—C21.8455 (9)C9—C101.5220 (13)
Se1—N11.8652 (9)C9—C161.5630 (12)
Cl1—C61.7360 (10)C9—H91.0000
Cl2—C131.7350 (10)C10—C111.3918 (13)
O1—N31.2216 (12)C10—C151.3944 (13)
O2—N31.2247 (11)C11—C121.3889 (15)
N1—N21.2734 (11)C11—H110.9500
N2—C11.3795 (12)C12—C131.3802 (16)
N3—C161.5451 (12)C12—H120.9500
C1—C21.3765 (12)C13—C141.3828 (16)
C1—C31.4762 (12)C14—C151.3877 (14)
C2—C91.5075 (13)C14—H140.9500
C3—C81.3923 (13)C15—H150.9500
C3—C41.3938 (13)C16—C181.5144 (13)
C4—C51.3895 (15)C16—C171.5259 (13)
C4—H40.9500C17—H17A0.9800
C5—C61.3851 (17)C17—H17B0.9800
C5—H50.9500C17—H17C0.9800
C6—C71.3826 (16)C18—H18A0.9800
C7—C81.3901 (14)C18—H18B0.9800
C7—H70.9500C18—H18C0.9800
C8—H80.9500
C2—Se1—N187.45 (4)C11—C10—C15118.31 (9)
N2—N1—Se1111.08 (6)C11—C10—C9118.61 (8)
N1—N2—C1117.26 (8)C15—C10—C9123.07 (8)
O1—N3—O2123.86 (9)C12—C11—C10121.26 (10)
O1—N3—C16118.80 (8)C12—C11—H11119.4
O2—N3—C16117.33 (8)C10—C11—H11119.4
C2—C1—N2115.83 (8)C13—C12—C11118.80 (10)
C2—C1—C3126.24 (8)C13—C12—H12120.6
N2—C1—C3117.87 (8)C11—C12—H12120.6
C1—C2—C9124.13 (8)C12—C13—C14121.63 (10)
C1—C2—Se1108.37 (6)C12—C13—Cl2119.39 (9)
C9—C2—Se1127.26 (6)C14—C13—Cl2118.95 (9)
C8—C3—C4119.31 (8)C13—C14—C15118.74 (10)
C8—C3—C1121.17 (8)C13—C14—H14120.6
C4—C3—C1119.50 (8)C15—C14—H14120.6
C5—C4—C3120.54 (10)C14—C15—C10121.25 (10)
C5—C4—H4119.7C14—C15—H15119.4
C3—C4—H4119.7C10—C15—H15119.4
C6—C5—C4118.75 (10)C18—C16—C17111.81 (8)
C6—C5—H5120.6C18—C16—N3107.47 (8)
C4—C5—H5120.6C17—C16—N3106.56 (7)
C7—C6—C5121.93 (9)C18—C16—C9116.40 (8)
C7—C6—Cl1118.93 (9)C17—C16—C9110.03 (7)
C5—C6—Cl1119.13 (9)N3—C16—C9103.77 (7)
C6—C7—C8118.62 (10)C16—C17—H17A109.5
C6—C7—H7120.7C16—C17—H17B109.5
C8—C7—H7120.7H17A—C17—H17B109.5
C7—C8—C3120.74 (9)C16—C17—H17C109.5
C7—C8—H8119.6H17A—C17—H17C109.5
C3—C8—H8119.6H17B—C17—H17C109.5
C2—C9—C10114.26 (7)C16—C18—H18A109.5
C2—C9—C16111.87 (7)C16—C18—H18B109.5
C10—C9—C16114.10 (7)H18A—C18—H18B109.5
C2—C9—H9105.2C16—C18—H18C109.5
C10—C9—H9105.2H18A—C18—H18C109.5
C16—C9—H9105.2H18B—C18—H18C109.5
C2—Se1—N1—N20.27 (7)Se1—C2—C9—C1656.27 (10)
Se1—N1—N2—C10.06 (10)C2—C9—C10—C11130.65 (9)
N1—N2—C1—C20.52 (12)C16—C9—C10—C1198.86 (10)
N1—N2—C1—C3177.82 (8)C2—C9—C10—C1549.27 (12)
N2—C1—C2—C9174.02 (8)C16—C9—C10—C1581.22 (11)
C3—C1—C2—C93.01 (14)C15—C10—C11—C120.63 (16)
N2—C1—C2—Se10.69 (10)C9—C10—C11—C12179.44 (10)
C3—C1—C2—Se1177.72 (7)C10—C11—C12—C130.08 (17)
N1—Se1—C2—C10.52 (7)C11—C12—C13—C140.43 (18)
N1—Se1—C2—C9173.98 (8)C11—C12—C13—Cl2178.47 (9)
C2—C1—C3—C850.52 (14)C12—C13—C14—C150.03 (18)
N2—C1—C3—C8132.50 (10)Cl2—C13—C14—C15178.09 (9)
C2—C1—C3—C4127.69 (11)C13—C14—C15—C100.72 (18)
N2—C1—C3—C449.29 (12)C11—C10—C15—C141.04 (16)
C8—C3—C4—C52.21 (16)C9—C10—C15—C14179.04 (10)
C1—C3—C4—C5176.03 (10)O1—N3—C16—C184.50 (11)
C3—C4—C5—C60.46 (18)O2—N3—C16—C18175.98 (8)
C4—C5—C6—C72.80 (19)O1—N3—C16—C17124.49 (9)
C4—C5—C6—Cl1176.20 (9)O2—N3—C16—C1755.98 (10)
C5—C6—C7—C82.35 (18)O1—N3—C16—C9119.35 (9)
Cl1—C6—C7—C8176.64 (9)O2—N3—C16—C960.17 (10)
C6—C7—C8—C30.43 (16)C2—C9—C16—C1874.54 (10)
C4—C3—C8—C72.67 (15)C10—C9—C16—C1857.11 (10)
C1—C3—C8—C7175.54 (9)C2—C9—C16—C1753.95 (10)
C1—C2—C9—C10111.01 (10)C10—C9—C16—C17174.40 (8)
Se1—C2—C9—C1075.30 (10)C2—C9—C16—N3167.63 (7)
C1—C2—C9—C16117.41 (9)C10—C9—C16—N360.71 (9)
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
C9—H9···O21.002.422.8271 (12)104
C15—H15···Se10.952.863.5496 (10)130
C18—H18A···Se10.982.703.4209 (10)130
C7—H7···O1i0.952.443.3757 (13)167
C15—H15···Cl1ii0.952.763.5923 (10)147
C17—H17A···N1iii0.982.573.4511 (13)149
C17—H17A···N2iii0.982.603.3919 (13)138
Symmetry codes: (i) −x+1, −y+1, −z; (ii) x, y, z+1; (iii) x+1, y, z.
Table 1
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
C9—H9···O21.002.422.8271 (12)104
C15—H15···Se10.952.863.5496 (10)130
C18—H18A···Se10.982.703.4209 (10)130
C7—H7···O1i0.952.443.3757 (13)167
C15—H15···Cl1ii0.952.763.5923 (10)147
C17—H17A···N1iii0.982.573.4511 (13)149
C17—H17A···N2iii0.982.603.3919 (13)138
Symmetry codes: (i) −x+1, −y+1, −z; (ii) x, y, z+1; (iii) x+1, y, z.
references
References top

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Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13.