supplementary materials


cv2404 scheme

Acta Cryst. (2008). E64, o992    [ doi:10.1107/S1600536808012592 ]

Low-temperature redetermination of trans-cyclohexane-1,2-dicarboxylic acid

M. R. Rizal and S. W. Ng

Abstract top

The molecule of the title compound, C8H12O4, lies on a twofold rotation axis that passes through the mid-points of two opposite C-C bonds of the ring. Carboxyl groups of adjacent molecules are linked by pairs of hydrogen bonds around a centre of inversion; this interaction gives rise to a chain that runs along [101].

Comment top

Crystallographic studies of the metal derivatives of trans-1,2-cyclohexanedicarboxylic acid occasionally refer to the room-temperature crystal structure of the dicarboxylic acid, which was reported in 1969. The report (Benedetti et al., 1969) contains typographical errors that have since been corrected in the Cambridge Structural Database (Version 5.29, Nov. 2007). The reported monoclinic cell dimensions can be transformed to 5.65 (1), b 13.34 (3), c 10.22 (3) Å; β 97.2 (2)°.

Whereas the low-temperature unit cell has a slightly larger volume compared with the room-temperature cell, the low-temperature cell has a much longer b-axis [13.840 (3) Å]. The bond distances and angles of room-temperature structure are normal; those of the present study are not significantly different despite the longer axis. Possibly, the expansion of this axis is a genuine observation. Moreover, the present study is able to establish the hydrogen bonding scheme of the compound (Scheme I, Fig. 1). Adjacent molecules are linked by a linear O–H···O hydrogen bond [2.662 (2) Å] into a chain (Fig. 2).

The crystal structures of 1,3- and 1,4-cyclohexanedicarboxylic acids have already been reported (van Koningsveld, 1984; Luger et al., 1972).

Related literature top

Studies on the metal derivatives of trans-1,2-cyclohexanedicarboxylic acid refer to the room temperature structure of Benedetti et al. (1969). The absence of a preferred orientation (either axial or equatorial) of the carboxyl groups in cyclohexanedicarboxylic acids is discussed in the case of the 1,3-cyclohexanedicarboxylic acid, see: van Koningsveld (1984). For the crystal structure of 1,4-cyclohexanedicarboxylic acid, see: Luger et al. (1972).

Experimental top

The commercially available acid was recrystallized from ethanol.

Refinement top

Carbon-bound H-atoms were placed in calculated positions (C—H 0.99 to 1.00 Å) and were included in the refinement in the riding model approximation, with U(H) set to 1.2 U(C). The acid H-atom was located in a difference Fourier map, and was isotropically refined with a distance restraint of O–H 0.85 (1) Å.

Computing details top

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound with atomic numbering and 70% probability displacement ellipsoids. Hydrogen atoms are drawn as spheres of arbitrary radiius. The unlabeled atoms are related to the labeled ones by 1 - x, y, 1/2 - z.
[Figure 2] Fig. 2. A portion of the crystal packing showing the hydrogen-bonded (dashed lines) chain.
trans-cyclohexane-1,2-dicarboxylic acid top
Crystal data top
C8H12O4F000 = 368
Mr = 172.18Dx = 1.483 Mg m3
Monoclinic, C2/cMo Kα radiation
λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 739 reflections
a = 5.585 (1) Åθ = 3.6–28.2º
b = 13.840 (3) ŵ = 0.12 mm1
c = 10.035 (2) ÅT = 100 (2) K
β = 96.114 (3)ºStrip, colourless
V = 771.3 (3) Å30.38 × 0.06 × 0.04 mm
Z = 4
Data collection top
Bruker SMART APEX
diffractometer
715 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.035
Monochromator: graphiteθmax = 27.5º
T = 100(2) Kθmin = 2.9º
ω scansh = 7→7
Absorption correction: Nonek = 17→17
2320 measured reflectionsl = 13→8
883 independent reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H atoms treated by a mixture of
independent and constrained refinement
wR(F2) = 0.115  w = 1/[σ2(Fo2) + (0.0635P)2 + 0.2009P]
where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max = 0.001
883 reflectionsΔρmax = 0.31 e Å3
59 parametersΔρmin = 0.28 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
Crystal data top
C8H12O4V = 771.3 (3) Å3
Mr = 172.18Z = 4
Monoclinic, C2/cMo Kα
a = 5.585 (1) ŵ = 0.12 mm1
b = 13.840 (3) ÅT = 100 (2) K
c = 10.035 (2) Å0.38 × 0.06 × 0.04 mm
β = 96.114 (3)º
Data collection top
Bruker SMART APEX
diffractometer
883 independent reflections
Absorption correction: None715 reflections with I > 2σ(I)
2320 measured reflectionsRint = 0.035
Refinement top
R[F2 > 2σ(F2)] = 0.0421 restraint
wR(F2) = 0.115H atoms treated by a mixture of
independent and constrained refinement
S = 1.07Δρmax = 0.31 e Å3
883 reflectionsΔρmin = 0.28 e Å3
59 parameters
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.0840 (2)0.1596 (1)0.0902 (1)0.0173 (3)
O20.4725 (2)0.1968 (1)0.0869 (1)0.0166 (3)
C10.3157 (3)0.1471 (1)0.1279 (2)0.0122 (3)
C20.3668 (2)0.0626 (1)0.2220 (2)0.0122 (4)
C30.2893 (3)0.0314 (1)0.1475 (2)0.0139 (4)
C40.3647 (3)0.1208 (1)0.2303 (2)0.0159 (4)
H1o0.068 (4)0.206 (1)0.035 (2)0.036 (6)*
H20.26760.07040.29860.015*
H3a0.11210.03150.12610.017*
H3b0.36260.03390.06200.017*
H4a0.27990.12180.31200.019*
H4b0.31840.17960.17760.019*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0124 (6)0.0179 (6)0.0205 (7)0.0008 (4)0.0027 (5)0.0074 (5)
O20.0149 (6)0.0153 (6)0.0186 (6)0.0017 (4)0.0028 (4)0.0048 (4)
C10.0140 (7)0.0112 (7)0.0107 (8)0.0012 (5)0.0025 (6)0.0034 (6)
C20.0115 (7)0.0118 (7)0.0126 (8)0.0003 (5)0.0025 (6)0.0004 (6)
C30.0138 (7)0.0141 (7)0.0134 (8)0.0013 (5)0.0012 (6)0.0014 (6)
C40.0170 (8)0.0109 (7)0.0190 (9)0.0011 (5)0.0012 (6)0.0003 (6)
Geometric parameters (Å, °) top
O1—C11.321 (2)O1—H1o0.85 (1)
O2—C11.220 (2)C2—H21.0000
C1—C21.511 (2)C3—H3a0.9900
C2—C2i1.533 (3)C3—H3b0.9900
C2—C31.5397 (19)C4—H4a0.9900
C3—C41.523 (2)C4—H4b0.9900
C4—C4i1.521 (3)
O2—C1—O1123.1 (1)C3—C2—H2108.3
O2—C1—C2123.6 (1)C4—C3—H3a109.2
O1—C1—C2113.3 (1)C2—C3—H3a109.2
C1—C2—C2i109.9 (1)C4—C3—H3b109.2
C1—C2—C3109.0 (1)C2—C3—H3b109.2
C2i—C2—C3112.9 (1)H3a—C3—H3b107.9
C4—C3—C2112.0 (1)C4i—C4—H4a109.5
C4i—C4—C3110.5 (1)C3—C4—H4a109.5
C1—O1—H1o109 (1)C4i—C4—H4b109.5
C1—C2—H2108.3C3—C4—H4b109.5
C2i—C2—H2108.3H4a—C4—H4b108.1
O2—C1—C2—C2i11.2 (2)C1—C2—C3—C4172.7 (1)
O1—C1—C2—C2i171.2 (1)C2i—C2—C3—C450.2 (2)
O2—C1—C2—C3113.0 (2)C2—C3—C4—C4i56.6 (2)
O1—C1—C2—C364.6 (2)
Symmetry codes: (i) −x+1, y, −z+1/2.
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
O1—H1o···O2ii0.85 (1)1.81 (1)2.662 (2)178 (2)
Symmetry codes: (ii) −x+1/2, −y+1/2, −z.
Table 1
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
O1—H1o···O2i0.85 (1)1.81 (1)2.662 (2)178 (2)
Symmetry codes: (i) −x+1/2, −y+1/2, −z.
Acknowledgements top

We thank the University of Malaya for the purchase of the diffractometer.

references
References top

Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.

Benedetti, E., Corradini, P., Perrone, C. & Post, B. (1969). J. Am. Chem. Soc. 91, 4072–4074.

Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.

Koningsveld, H. van (1984). Acta Cryst. C40, 1857–1863.

Luger, P., Plieth, K. & Ruban, G. (1972). Acta Cryst. B28, 706–710.

Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.

Westrip, S. P. (2008). publCIF. In preparation.