supplementary materials


pv2082 scheme

Acta Cryst. (2008). E64, o1117    [ doi:10.1107/S1600536808014591 ]

4-Bromo-8-methoxyquinoline

N. Vasdev, P. V. Kulkarni, A. A. Wilson, S. Houle and A. J. Lough

Abstract top

The non-H atoms of the title molecule, C10H8BrNO, are essentially coplanar. In the crystal structure, molecules are linked by weak intermolecular C-H...[pi](arene) interactions, forming one-dimensional chains along the a axis.

Comment top

Quinoline derivatatives are established chelating agents and also have applications as precursors for pesticides and pharmaceuticals (Michael, 2008). Our laboratories are pursuing the development of radiohalogenated 8-hydroxyquinoline derivatives for positron emission tomography (PET) and single photon emission computed tomography (SPECT), specifically to image extracellular glial deposition of amyloid plaque protein in Alzheimer's disease and matrix metalloproteinases in tumours (Kulkarni et al., 2006). 4-Bromo-8-methoxyquinoline, first reported by Irving & Pinnington (1957) may be used as a precursor for radiohalogenation reactions to prepare labelled 8-hydroxyquinoline-based PET or SPECT radiopharmaceuticals. To our surprise, neutral compounds bearing a 4-halogen substituted, 8-phenoxyquinoline core have not yet been studied by single-crystal X-ray crystallography. In the present study we report the crystal structure of the title compound at 150 K.

The non-hydrogen atoms of title molecule (Fig. 1), C10H8BrNO, are essentially co-planar (r.m.s. deviation of all non-H atoms = 0.0242 Å). In the crystal structure, molecules are linked by weak intermolecuar C—H···π(arene) interactions to form one-dimensional chains along the a axis (Fig. 2). There are no other hydrogen bonds or π···π stacking interactions.

Related literature top

For related literature, see: Michael (2008); Kulkarni et al. (2006); Irving & Pinnington (1957). Cg is the centroid of the C4–C9 ring.

Experimental top

X-ray quality crystals were obtained by evaporation of a solution of the title compound (ECA International Corporation, Palatine, Illinois, USA) in chloroform.

Refinement top

H atoms were placed in calculated positions with C—H = 0.95Å (aryl) and 0.98Å (methyl) and were included in the refinement in the riding-model approximation with Uiso(H) = 1.2Ueq(C) or Uiso(H) = 1.5Ueq(C) for methyl H atoms.

Computing details top

Data collection: COLLECT (Nonius, 2002); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003) and SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. Molecular structure showing 30% probability displacement ellipsoids (arbitrary spheres for H atoms).
[Figure 2] Fig. 2. Part of the crystal structure showing weak C—H···π(arene) interactions as dashed lines.
4-Bromo-8-methoxyquinoline top
Crystal data top
C10H8BrNOF000 = 472
Mr = 238.08Dx = 1.773 Mg m3
Orthorhombic, P212121Mo Kα radiation
λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 6134 reflections
a = 5.1615 (1) Åθ = 2.9–27.5º
b = 12.1337 (6) ŵ = 4.56 mm1
c = 14.2436 (7) ÅT = 150 (1) K
V = 892.05 (6) Å3Needle, colourless
Z = 40.30 × 0.12 × 0.11 mm
Data collection top
Nonius KappaCCD
diffractometer
2026 independent reflections
Radiation source: fine-focus sealed tube1872 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.036
Detector resolution: 9 pixels mm-1θmax = 27.5º
T = 150(2) Kθmin = 2.9º
φ scans and ω scans with κ offsetsh = 5→6
Absorption correction: multi-scan
(SORTAV; Blessing 1995)
k = 14→15
Tmin = 0.545, Tmax = 0.607l = 18→18
6134 measured reflections
Refinement top
Refinement on F2H-atom parameters constrained
Least-squares matrix: full  w = 1/[σ2(Fo2) + (0.0306P)2 + 0.0333P]
where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.028(Δ/σ)max = 0.001
wR(F2) = 0.059Δρmax = 0.38 e Å3
S = 1.01Δρmin = 0.40 e Å3
2026 reflectionsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
120 parametersExtinction coefficient: 0.0062 (8)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 815 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.017 (11)
Hydrogen site location: inferred from neighbouring sites
Crystal data top
C10H8BrNOV = 892.05 (6) Å3
Mr = 238.08Z = 4
Orthorhombic, P212121Mo Kα
a = 5.1615 (1) ŵ = 4.56 mm1
b = 12.1337 (6) ÅT = 150 (1) K
c = 14.2436 (7) Å0.30 × 0.12 × 0.11 mm
Data collection top
Nonius KappaCCD
diffractometer
2026 independent reflections
Absorption correction: multi-scan
(SORTAV; Blessing 1995)
1872 reflections with I > 2σ(I)
Tmin = 0.545, Tmax = 0.607Rint = 0.036
6134 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.028H-atom parameters constrained
wR(F2) = 0.059Δρmax = 0.38 e Å3
S = 1.01Δρmin = 0.40 e Å3
2026 reflectionsAbsolute structure: Flack (1983), 815 Friedel pairs
120 parametersFlack parameter: 0.017 (11)
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Br11.02034 (5)0.36147 (2)0.509948 (18)0.02940 (11)
O10.1007 (3)0.62674 (16)0.72708 (14)0.0259 (4)
N10.4260 (4)0.64140 (17)0.58326 (14)0.0233 (4)
C10.5884 (5)0.6481 (2)0.51287 (18)0.0278 (6)
H1A0.58190.71260.47520.033*
C20.7717 (5)0.5671 (2)0.48878 (19)0.0268 (6)
H2A0.88420.57680.43660.032*
C30.7833 (5)0.4746 (2)0.54217 (19)0.0239 (6)
C40.6190 (5)0.4611 (2)0.62176 (17)0.0188 (5)
C50.6239 (5)0.3694 (2)0.68244 (18)0.0232 (6)
H5A0.74290.31090.67180.028*
C60.4556 (5)0.3650 (2)0.75705 (17)0.0243 (6)
H6A0.46240.30380.79860.029*
C70.2739 (5)0.4487 (2)0.77325 (18)0.0235 (6)
H7A0.15580.44240.82410.028*
C80.2656 (5)0.5400 (2)0.71586 (17)0.0195 (5)
C90.4408 (5)0.54916 (19)0.63810 (16)0.0199 (5)
C100.0731 (5)0.6201 (2)0.80535 (18)0.0271 (7)
H10C0.17840.68720.80830.041*
H10D0.02690.61260.86350.041*
H10A0.18650.55590.79780.041*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Br10.02472 (15)0.03108 (16)0.03239 (16)0.00303 (10)0.00306 (11)0.00756 (11)
O10.0264 (10)0.0255 (11)0.0259 (10)0.0030 (8)0.0047 (7)0.0004 (8)
N10.0281 (10)0.0212 (11)0.0206 (11)0.0009 (9)0.0021 (8)0.0001 (10)
C10.0339 (13)0.0259 (14)0.0237 (14)0.0019 (10)0.0030 (10)0.0087 (14)
C20.0265 (12)0.0299 (14)0.0240 (14)0.0065 (10)0.0049 (12)0.0001 (13)
C30.0215 (13)0.0257 (14)0.0246 (15)0.0015 (10)0.0025 (10)0.0078 (12)
C40.0210 (13)0.0184 (13)0.0169 (13)0.0037 (9)0.0018 (9)0.0016 (11)
C50.0224 (12)0.0215 (14)0.0257 (14)0.0016 (11)0.0064 (10)0.0019 (12)
C60.0328 (15)0.0176 (13)0.0225 (13)0.0037 (13)0.0074 (11)0.0035 (11)
C70.0257 (14)0.0258 (15)0.0191 (14)0.0088 (11)0.0018 (11)0.0010 (11)
C80.0208 (13)0.0185 (13)0.0193 (13)0.0003 (10)0.0021 (10)0.0014 (11)
C90.0207 (12)0.0204 (13)0.0186 (12)0.0042 (10)0.0046 (10)0.0010 (10)
C100.0240 (14)0.0314 (17)0.0258 (15)0.0015 (12)0.0047 (11)0.0028 (12)
Geometric parameters (Å, °) top
Br1—C31.895 (2)C4—C91.429 (3)
O1—C81.362 (3)C5—C61.374 (4)
O1—C101.433 (3)C5—H5A0.9500
N1—C11.309 (3)C6—C71.402 (4)
N1—C91.367 (3)C6—H6A0.9500
C1—C21.407 (4)C7—C81.378 (4)
C1—H1A0.9500C7—H7A0.9500
C2—C31.357 (3)C8—C91.434 (3)
C2—H2A0.9500C10—H10C0.9800
C3—C41.425 (3)C10—H10D0.9800
C4—C51.409 (4)C10—H10A0.9800
C8—O1—C10116.0 (2)C5—C6—H6A119.3
C1—N1—C9116.9 (2)C7—C6—H6A119.3
N1—C1—C2125.0 (2)C8—C7—C6120.4 (2)
N1—C1—H1A117.5C8—C7—H7A119.8
C2—C1—H1A117.5C6—C7—H7A119.8
C3—C2—C1118.1 (2)O1—C8—C7124.8 (2)
C3—C2—H2A121.0O1—C8—C9115.1 (2)
C1—C2—H2A121.0C7—C8—C9120.0 (2)
C2—C3—C4121.0 (2)N1—C9—C4123.7 (2)
C2—C3—Br1119.4 (2)N1—C9—C8118.0 (2)
C4—C3—Br1119.58 (19)C4—C9—C8118.3 (2)
C5—C4—C3124.6 (2)O1—C10—H10C109.5
C5—C4—C9120.1 (2)O1—C10—H10D109.5
C3—C4—C9115.3 (2)H10C—C10—H10D109.5
C6—C5—C4119.6 (3)O1—C10—H10A109.5
C6—C5—H5A120.2H10C—C10—H10A109.5
C4—C5—H5A120.2H10D—C10—H10A109.5
C5—C6—C7121.5 (2)
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
C10—H10A···Cgi0.982.663.531 (3)148
Symmetry codes: (i) x−1, y, z.
Table 1
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
C10—H10A···Cgi0.982.663.531 (3)148
Symmetry codes: (i) x−1, y, z.
Acknowledgements top

We thank Dr Peter P. Antich and Dr Frederick J. Bonte for helpful discussions and support. Financial support for this work was provided by the Natural Sciences and Engineering Research Council of Canada (NSERC).

references
References top

Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst. 27, 435.

Blessing, R. H. (1995). Acta Cryst. A51, 33–38.

Flack, H. D. (1983). Acta Cryst. A39, 876–881.

Irving, H. & Pinnington, A. R. (1957). J. Chem. Soc. pp. 285–290.

Kulkarni, P., Arora, V., Bennett, M., Roney, C., Partridge, K., Lewis, M., Antich, P. & Bonte, F. (2006). J. Nucl. Med. 47, 509P–510P.

Michael, J. P. (2008). Nat. Prod. Rep. 25, 166–187.

Nonius (2002). COLLECT. Nonius BV, Delft, The Netherlands.

Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A edited by C. W. Carter Jr & R. M. Sweet pp. 307–326. London: Academic press.

Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.

Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13.