supplementary materials


cs2086 scheme

Acta Cryst. (2008). E64, o1736    [ doi:10.1107/S1600536808024938 ]

Dimethyl 5-nitroisophthalate

M.-H. Xie, P. Zou, Y.-J. He, Y.-L. Liu and B. Huang

Abstract top

The nitro group in the title compound, C10H9NO6, is rotated by 10.9 (5)° out of the plane of the benzene ring.

Comment top

The title molecule (Fig.1), is useful as an important intermediate for the preparation of iodinated X-ray contrast media, in particular non-ionic ones such as Iopamidol, Iohexol and Ioversol, being used clinically all over the world (Cutroneo et al., 2007; Bjorsvik et al., 2001; Enzweiler et al., 2006). This crystal structure shows that the benzene ring and the nitro group are only slightly inclined, as shown by the torsion angles of O5—N—C7—C6 -10.6 (5)° and of O6—N—C7—C8 -11.2 (5)°.

Related literature top

For related literature, see: Bjorsvik et al. (2001); Cutroneo et al. (2007); Enzweiler et al. (2006).

Experimental top

5-nitroisophthalic acid (0.5 mmol,100.6 mg) was dissolved in hot methanol (5 ml), then a drop of concentrated sulfuric acid was added and refluxed for 4 h. The precipitate was filtered off, washed with water and dissolved in 95% ethanol(20 mL). The solution was evaporated in air affording colourless needle crystals suitable for X-ray analysis (yield: 85.2%).

Refinement top

Positional parameters of all the H atoms bonded to C atoms were calculated geometrically and were allowed to ride on the C atoms to which they are bonded, with C—H = 0.93 (aromatic) and with Uiso(H) = 1.2Ueq(C) or 0.96 (methyl) and Uiso(H) = 1.5Ueq(C), respectively.

Computing details top

Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell refinement: CAD-4 Software (Enraf–Nonius, 1989); data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXL97 (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. A view of the title compound with the atomic numbering scheme. Displacement ellipsoids were drawn at the 30% probability level.
Dimethyl 5-nitrobenzene-1,3-dicarboxylate top
Crystal data top
C10H9NO6Z = 2
Mr = 239.18F000 = 248
Triclinic, P1Dx = 1.534 Mg m3
Hall symbol: -P 1Mo Kα radiation
λ = 0.71073 Å
a = 4.0130 (8) ÅCell parameters from 25 reflections
b = 10.660 (2) Åθ = 8–12º
c = 12.643 (3) ŵ = 0.13 mm1
α = 106.11 (3)ºT = 293 (2) K
β = 93.74 (3)ºNeedle, colourless
γ = 91.46 (3)º0.40 × 0.05 × 0.05 mm
V = 517.97 (18) Å3
Data collection top
Enraf–Nonius CAD-4
diffractometer
Rint = 0.041
Radiation source: fine-focus sealed tubeθmax = 25.3º
Monochromator: graphiteθmin = 1.7º
T = 293(2) Kh = 4→4
ω/2θ scansk = 12→12
Absorption correction: ψ scan
(North et al., 1968))
l = 0→15
Tmin = 0.950, Tmax = 0.9943 standard reflections
2178 measured reflections every 200 reflections
1885 independent reflections intensity decay: none
1144 reflections with I > 2σ(I)
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.073H-atom parameters constrained
wR(F2) = 0.172  w = 1/[σ2(Fo2) + (0.05P)2 + 0.6P]
where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
1885 reflectionsΔρmax = 0.28 e Å3
154 parametersΔρmin = 0.18 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Crystal data top
C10H9NO6γ = 91.46 (3)º
Mr = 239.18V = 517.97 (18) Å3
Triclinic, P1Z = 2
a = 4.0130 (8) ÅMo Kα
b = 10.660 (2) ŵ = 0.13 mm1
c = 12.643 (3) ÅT = 293 (2) K
α = 106.11 (3)º0.40 × 0.05 × 0.05 mm
β = 93.74 (3)º
Data collection top
Enraf–Nonius CAD-4
diffractometer
1144 reflections with I > 2σ(I)
Absorption correction: ψ scan
(North et al., 1968))
Rint = 0.041
Tmin = 0.950, Tmax = 0.9943 standard reflections
2178 measured reflections every 200 reflections
1885 independent reflections intensity decay: none
Refinement top
R[F2 > 2σ(F2)] = 0.073154 parameters
wR(F2) = 0.172H-atom parameters constrained
S = 1.01Δρmax = 0.28 e Å3
1885 reflectionsΔρmin = 0.18 e Å3
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N0.5209 (9)0.7040 (3)0.8012 (3)0.0572 (8)
O10.7307 (7)0.1642 (2)0.5059 (2)0.0642 (8)
C10.8443 (12)0.0907 (4)0.4027 (3)0.0717 (13)
H1A0.82150.00100.39650.108*
H1B1.07480.11450.39920.108*
H1C0.71260.10940.34310.108*
O20.8638 (9)0.3487 (3)0.4668 (2)0.0825 (10)
C20.7532 (9)0.2943 (3)0.5284 (3)0.0480 (9)
O30.2103 (7)0.1601 (2)0.8322 (2)0.0608 (8)
C30.0691 (12)0.0824 (4)0.8961 (4)0.0703 (12)
H3A0.08330.00860.85830.105*
H3B0.16100.10220.90540.105*
H3C0.19060.10160.96710.105*
O40.1018 (8)0.3426 (3)0.9595 (2)0.0739 (9)
C40.2108 (9)0.2883 (3)0.8735 (3)0.0482 (9)
C50.3639 (8)0.3588 (3)0.8013 (3)0.0424 (8)
O50.3683 (10)0.7593 (3)0.8783 (3)0.0957 (12)
C60.3703 (9)0.4947 (3)0.8341 (3)0.0465 (9)
H6A0.28390.54010.89960.056*
O60.6840 (9)0.7614 (3)0.7524 (3)0.0910 (11)
C70.5090 (8)0.5598 (3)0.7663 (3)0.0445 (8)
C80.6352 (8)0.4972 (3)0.6687 (3)0.0457 (8)
H8A0.72760.54470.62540.055*
C90.6236 (9)0.3612 (3)0.6351 (3)0.0448 (8)
C100.4871 (8)0.2942 (3)0.7022 (3)0.0450 (8)
H10A0.47810.20330.68020.054*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N0.065 (2)0.0474 (18)0.061 (2)0.0053 (16)0.0112 (17)0.0155 (16)
O10.091 (2)0.0508 (15)0.0511 (15)0.0022 (14)0.0238 (14)0.0100 (12)
C10.099 (4)0.062 (2)0.054 (2)0.013 (2)0.027 (2)0.009 (2)
O20.124 (3)0.0604 (17)0.0677 (19)0.0108 (17)0.0448 (18)0.0181 (15)
C20.049 (2)0.0464 (19)0.050 (2)0.0043 (16)0.0047 (17)0.0156 (17)
O30.085 (2)0.0465 (14)0.0549 (16)0.0031 (13)0.0257 (14)0.0166 (12)
C30.089 (3)0.057 (2)0.072 (3)0.002 (2)0.027 (2)0.025 (2)
O40.105 (2)0.0593 (17)0.0644 (18)0.0145 (16)0.0411 (17)0.0209 (14)
C40.049 (2)0.049 (2)0.048 (2)0.0061 (16)0.0103 (17)0.0131 (17)
C50.0417 (19)0.0443 (18)0.0420 (19)0.0034 (15)0.0021 (15)0.0139 (15)
O50.134 (3)0.0523 (17)0.107 (3)0.0219 (18)0.057 (2)0.0198 (17)
C60.050 (2)0.0473 (19)0.0437 (19)0.0042 (16)0.0029 (16)0.0145 (16)
O60.131 (3)0.0527 (17)0.089 (2)0.0210 (18)0.036 (2)0.0148 (16)
C70.0388 (19)0.0405 (17)0.054 (2)0.0001 (15)0.0011 (16)0.0137 (16)
C80.045 (2)0.0507 (19)0.0432 (19)0.0005 (16)0.0012 (16)0.0174 (16)
C90.047 (2)0.0464 (19)0.0412 (18)0.0013 (16)0.0028 (16)0.0127 (15)
C100.044 (2)0.0449 (18)0.046 (2)0.0032 (15)0.0042 (16)0.0130 (16)
Geometric parameters (Å, °) top
N—O61.194 (4)C3—H3B0.9600
N—O51.204 (4)C3—H3C0.9600
N—C71.475 (4)O4—C41.198 (4)
O1—C21.336 (4)C4—C51.485 (5)
O1—C11.433 (4)C5—C101.381 (4)
C1—H1A0.9600C5—C61.391 (5)
C1—H1B0.9600C6—C71.378 (5)
C1—H1C0.9600C6—H6A0.9300
O2—C21.193 (4)C7—C81.366 (5)
C2—C91.475 (5)C8—C91.392 (5)
O3—C41.320 (4)C8—H8A0.9300
O3—C31.438 (4)C9—C101.381 (5)
C3—H3A0.9600C10—H10A0.9300
O6—N—O5122.5 (3)O4—C4—C5123.3 (3)
O6—N—C7118.6 (3)O3—C4—C5112.4 (3)
O5—N—C7118.9 (3)C10—C5—C6119.7 (3)
C2—O1—C1116.9 (3)C10—C5—C4122.3 (3)
O1—C1—H1A109.5C6—C5—C4117.9 (3)
O1—C1—H1B109.5C7—C6—C5117.8 (3)
H1A—C1—H1B109.5C7—C6—H6A121.1
O1—C1—H1C109.5C5—C6—H6A121.1
H1A—C1—H1C109.5C8—C7—C6123.1 (3)
H1B—C1—H1C109.5C8—C7—N118.7 (3)
O2—C2—O1122.5 (3)C6—C7—N118.2 (3)
O2—C2—C9124.5 (3)C7—C8—C9119.0 (3)
O1—C2—C9112.9 (3)C7—C8—H8A120.5
C4—O3—C3116.9 (3)C9—C8—H8A120.5
O3—C3—H3A109.5C10—C9—C8118.7 (3)
O3—C3—H3B109.5C10—C9—C2122.6 (3)
H3A—C3—H3B109.5C8—C9—C2118.7 (3)
O3—C3—H3C109.5C5—C10—C9121.6 (3)
H3A—C3—H3C109.5C5—C10—H10A119.2
H3B—C3—H3C109.5C9—C10—H10A119.2
O4—C4—O3124.3 (3)
C1—O1—C2—O20.4 (6)O6—N—C7—C6168.8 (4)
C1—O1—C2—C9178.7 (3)O5—N—C7—C610.6 (5)
C3—O3—C4—O40.1 (6)C6—C7—C8—C90.2 (5)
C3—O3—C4—C5179.7 (3)N—C7—C8—C9179.7 (3)
O4—C4—C5—C10179.8 (4)C7—C8—C9—C100.6 (5)
O3—C4—C5—C100.4 (5)C7—C8—C9—C2178.6 (3)
O4—C4—C5—C62.1 (5)O2—C2—C9—C10177.7 (4)
O3—C4—C5—C6178.1 (3)O1—C2—C9—C101.4 (5)
C10—C5—C6—C71.5 (5)O2—C2—C9—C81.4 (6)
C4—C5—C6—C7179.3 (3)O1—C2—C9—C8179.5 (3)
C5—C6—C7—C80.8 (5)C6—C5—C10—C91.2 (5)
C5—C6—C7—N179.2 (3)C4—C5—C10—C9178.9 (3)
O6—N—C7—C811.2 (5)C8—C9—C10—C50.1 (5)
O5—N—C7—C8169.4 (4)C2—C9—C10—C5179.3 (3)
Acknowledgements top

The Key Laboratory of Nuclear Medicine of Ministry Health of China are thanked for supporting this work.

references
References top

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