supplementary materials

4,4'-[8b,8c-Bis(ethoxycarbonyl)-4,8-dioxo-2,3,5,6-tetrahydro-1H,4H-2,3a,4a,6,7a,8a-hexaazacyclopenta[def]fluorene-2,6-diyl]dipyridinium bis(tetrafluoridoborate)
- Related literature
- Experimental
- Refinement
- Computing details
- Figures
- 4,4'-[8b,8c-bis(ethoxycarbonyl)-4,8-dioxo-2,3,5,6-tetrahydro-
1H,4H-2,3a,4a,6,7a,8a-hexaazacyclopenta[def]fluorene-
2,6-diyl]dipyridinium bis(tetrafluoridoborate)
- Acknowledgements
- References
A suspension of di(ethoxycarbonyl) glycoluril (1.43 g, 5 mmol) in 37% aq
formaldehyde (3.5 ml) and MeOH (30 ml) was brought to reflux under magnetic
stirring. Pyridin-4-ylmethanamine (15 mmol) in MeOH (20 ml) was slowly added
dropwise (over 1 h) to the mixture. Then refluxing was continued. The reaction
was monitored by TLC. The solvent was removed under reduced pressure and the
products were separated by column chromatography (silica gel) with the yield
70%. X-ray quality crystals were grown from a Dichloromethane and Fluoboric
acid solution at room temperature.
Positional disorder in the molecule was resolved with occupancies
for the major and minor components refining to 0.62 (8) and 0.37 (2)
for O4-C13-C14, 0.58 (5) and 0.41 (5) for F1-F2-F3-F4, 0.59 (2) and 0.40 (8)
for F5-F6-F7-F8. All H atoms were positioned geometrically
(C—H = 0.93–0.97 Å, N—H = 0.86 Å)
and refined as riding, allowing for free rotation
of methyl groups. The constraint
Uiso (H) = 1.2Ueq (C, N) or 1.5Ueq (methyl C) was applied.
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
4,4'-[8b,8c-bis(ethoxycarbonyl)-4,8-dioxo-2,3,5,6-tetrahydro-
1H,4H-2,3a,4a,6,7a,8a-hexaazacyclopenta[
def]fluorene-
2,6-diyl]dipyridinium bis(tetrafluoridoborate)
top
Crystal data top
| C26H32N8O62+·2BF4– | F000 = 1496 |
| Mr = 726.22 | Dx = 1.497 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation λ = 0.71073 Å |
| Hall symbol: -P 2yn | Cell parameters from 3447 reflections |
| a = 17.9399 (17) Å | θ = 2.7–21.9º |
| b = 7.9673 (8) Å | µ = 0.14 mm−1 |
| c = 22.580 (2) Å | T = 298 (2) K |
| β = 93.089 (2)º | Block, yellow |
| V = 3222.7 (5) Å3 | 0.36 × 0.30 × 0.26 mm |
| Z = 4 | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 3356 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.079 |
| Monochromator: graphite | θmax = 25.0º |
| T = 298(2) K | θmin = 1.5º |
| phi and ω scans | h = −20→21 |
| Absorption correction: none | k = −9→9 |
| 17389 measured reflections | l = −26→25 |
| 5673 independent reflections | |
Refinement top
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.066 | H-atom parameters constrained |
| wR(F2) = 0.198 | w = 1/[σ2(Fo2) + (0.118P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 0.96 | (Δ/σ)max < 0.001 |
| 5673 reflections | Δρmax = 0.39 e Å−3 |
| 556 parameters | Δρmin = −0.21 e Å−3 |
| 45 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods | |
Crystal data top
| C26H32N8O62+·2BF4– | V = 3222.7 (5) Å3 |
| Mr = 726.22 | Z = 4 |
| Monoclinic, P21/n | Mo Kα |
| a = 17.9399 (17) Å | µ = 0.14 mm−1 |
| b = 7.9673 (8) Å | T = 298 (2) K |
| c = 22.580 (2) Å | 0.36 × 0.30 × 0.26 mm |
| β = 93.089 (2)º | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 5673 independent reflections |
| Absorption correction: none | 3356 reflections with I > 2σ(I) |
| 17389 measured reflections | Rint = 0.079 |
Refinement top
| R[F2 > 2σ(F2)] = 0.066 | 45 restraints |
| wR(F2) = 0.198 | H-atom parameters constrained |
| S = 0.96 | Δρmax = 0.39 e Å−3 |
| 5673 reflections | Δρmin = −0.21 e Å−3 |
| 556 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | Occ. (<1) |
| C1 | 0.5001 (2) | 0.2921 (4) | 1.03044 (15) | 0.0681 (9) | |
| H1 | 0.4825 | 0.3271 | 1.0664 | 0.082* | |
| C2 | 0.57382 (18) | 0.3098 (4) | 1.01969 (14) | 0.0614 (8) | |
| H2 | 0.6062 | 0.3596 | 1.0480 | 0.074* | |
| C3 | 0.60061 (16) | 0.2541 (4) | 0.96692 (13) | 0.0525 (7) | |
| C4 | 0.54954 (19) | 0.1868 (5) | 0.92583 (15) | 0.0774 (11) | |
| H4 | 0.5653 | 0.1498 | 0.8895 | 0.093* | |
| C5 | 0.4769 (2) | 0.1739 (6) | 0.93781 (16) | 0.0849 (12) | |
| H5 | 0.4430 | 0.1288 | 0.9095 | 0.102* | |
| C6 | 0.68192 (16) | 0.2666 (5) | 0.95544 (13) | 0.0603 (8) | |
| H6A | 0.7019 | 0.3691 | 0.9732 | 0.072* | |
| H6B | 0.7082 | 0.1728 | 0.9744 | 0.072* | |
| C7 | 0.67801 (16) | 0.4271 (4) | 0.86354 (13) | 0.0609 (9) | |
| H7A | 0.6740 | 0.4110 | 0.8209 | 0.073* | |
| H7B | 0.6299 | 0.4657 | 0.8758 | 0.073* | |
| C8 | 0.77071 (17) | 0.2133 (4) | 0.87916 (14) | 0.0607 (8) | |
| H8A | 0.7714 | 0.1844 | 0.8375 | 0.073* | |
| H8B | 0.7835 | 0.1132 | 0.9020 | 0.073* | |
| C9 | 0.86504 (15) | 0.3565 (4) | 0.94858 (13) | 0.0533 (8) | |
| C10 | 0.72970 (16) | 0.6712 (4) | 0.92212 (12) | 0.0544 (8) | |
| C11 | 0.81079 (15) | 0.5083 (4) | 0.86883 (12) | 0.0522 (8) | |
| C12 | 0.8258 (2) | 0.5248 (5) | 0.80193 (15) | 0.0698 (10) | |
| O4 | 0.8874 (7) | 0.4592 (18) | 0.7910 (3) | 0.084 (3) | 0.372 (12) |
| C13 | 0.9117 (10) | 0.4813 (18) | 0.7335 (5) | 0.102 (5) | 0.372 (12) |
| H13A | 0.9653 | 0.4988 | 0.7352 | 0.122* | 0.372 (12) |
| H13B | 0.8879 | 0.5794 | 0.7154 | 0.122* | 0.372 (12) |
| C14 | 0.8922 (18) | 0.329 (2) | 0.6973 (6) | 0.172 (13) | 0.372 (12) |
| H14A | 0.8924 | 0.2319 | 0.7226 | 0.258* | 0.372 (12) |
| H14B | 0.9283 | 0.3136 | 0.6678 | 0.258* | 0.372 (12) |
| H14C | 0.8435 | 0.3424 | 0.6781 | 0.258* | 0.372 (12) |
| C13' | 0.8736 (5) | 0.3895 (17) | 0.7186 (3) | 0.119 (4) | 0.628 (12) |
| H13C | 0.8497 | 0.4859 | 0.6994 | 0.143* | 0.628 (12) |
| H13D | 0.8545 | 0.2888 | 0.6989 | 0.143* | 0.628 (12) |
| C14' | 0.9554 (5) | 0.3997 (17) | 0.7141 (4) | 0.135 (5) | 0.628 (12) |
| H14D | 0.9719 | 0.5121 | 0.7228 | 0.203* | 0.628 (12) |
| H14E | 0.9680 | 0.3701 | 0.6747 | 0.203* | 0.628 (12) |
| H14F | 0.9795 | 0.3235 | 0.7420 | 0.203* | 0.628 (12) |
| O4' | 0.8572 (4) | 0.3859 (10) | 0.7797 (2) | 0.0828 (19) | 0.628 (12) |
| C15 | 0.85621 (15) | 0.6300 (4) | 0.91047 (12) | 0.0524 (7) | |
| C16 | 0.9183 (2) | 0.7291 (5) | 0.88022 (16) | 0.0695 (9) | |
| C17 | 0.9536 (4) | 0.9832 (7) | 0.8373 (3) | 0.150 (2) | |
| H17A | 0.9780 | 0.9152 | 0.8084 | 0.180* | |
| H17B | 0.9277 | 1.0744 | 0.8164 | 0.180* | |
| C18 | 1.0099 (4) | 1.0520 (9) | 0.8811 (4) | 0.213 (4) | |
| H18A | 1.0478 | 0.9691 | 0.8899 | 0.320* | |
| H18B | 0.9862 | 1.0811 | 0.9168 | 0.320* | |
| H18C | 1.0324 | 1.1502 | 0.8651 | 0.320* | |
| C19 | 0.91213 (16) | 0.5955 (5) | 1.01245 (13) | 0.0619 (9) | |
| H19A | 0.9270 | 0.5080 | 1.0406 | 0.074* | |
| H19B | 0.9550 | 0.6675 | 1.0077 | 0.074* | |
| C20 | 0.82271 (18) | 0.8131 (4) | 0.99351 (13) | 0.0599 (8) | |
| H20A | 0.8600 | 0.8985 | 0.9873 | 0.072* | |
| H20B | 0.7798 | 0.8680 | 1.0093 | 0.072* | |
| C21 | 0.79600 (17) | 0.5878 (5) | 1.06348 (12) | 0.0634 (9) | |
| H21A | 0.7865 | 0.4890 | 1.0392 | 0.076* | |
| H21B | 0.7496 | 0.6499 | 1.0651 | 0.076* | |
| C22 | 0.82226 (16) | 0.5353 (4) | 1.12506 (13) | 0.0562 (8) | |
| C23 | 0.8290 (2) | 0.6502 (5) | 1.17015 (14) | 0.0771 (10) | |
| H23 | 0.8202 | 0.7633 | 1.1623 | 0.092* | |
| C24 | 0.8490 (2) | 0.5984 (6) | 1.22743 (16) | 0.0879 (12) | |
| H24 | 0.8535 | 0.6752 | 1.2584 | 0.105* | |
| C25 | 0.8385 (2) | 0.3710 (5) | 1.13763 (16) | 0.0801 (10) | |
| H25 | 0.8359 | 0.2917 | 1.1073 | 0.096* | |
| C26 | 0.8587 (2) | 0.3221 (6) | 1.19426 (19) | 0.0905 (12) | |
| H26 | 0.8702 | 0.2106 | 1.2028 | 0.109* | |
| F1 | 0.4030 (7) | 0.5250 (14) | 0.7710 (4) | 0.224 (8) | 0.585 (14) |
| F2 | 0.4475 (4) | 0.2852 (6) | 0.8070 (3) | 0.107 (3) | 0.585 (14) |
| F3 | 0.3902 (5) | 0.4596 (10) | 0.8656 (3) | 0.159 (4) | 0.585 (14) |
| F4 | 0.5018 (5) | 0.5213 (11) | 0.8372 (6) | 0.181 (5) | 0.585 (14) |
| F1' | 0.4694 (10) | 0.5329 (16) | 0.8592 (5) | 0.179 (7) | 0.415 (14) |
| F2' | 0.4928 (11) | 0.334 (2) | 0.7966 (5) | 0.222 (10) | 0.415 (14) |
| F3' | 0.4150 (6) | 0.5340 (13) | 0.7668 (4) | 0.106 (4) | 0.415 (14) |
| F4' | 0.3802 (7) | 0.348 (3) | 0.8322 (9) | 0.250 (12) | 0.415 (14) |
| F5 | 0.2541 (3) | 0.9974 (8) | 0.8457 (3) | 0.112 (2) | 0.592 (9) |
| F6 | 0.2869 (4) | 0.8083 (8) | 0.9145 (3) | 0.130 (3) | 0.592 (9) |
| F7 | 0.3729 (2) | 0.9319 (5) | 0.86238 (15) | 0.0743 (16) | 0.592 (9) |
| F8 | 0.3161 (5) | 1.0776 (12) | 0.9308 (4) | 0.168 (5) | 0.592 (9) |
| F5' | 0.3113 (7) | 0.7954 (11) | 0.8864 (7) | 0.236 (10) | 0.408 (9) |
| F6' | 0.3243 (5) | 1.0241 (10) | 0.9440 (2) | 0.068 (2) | 0.408 (9) |
| F7' | 0.3375 (9) | 1.047 (3) | 0.8487 (3) | 0.399 (19) | 0.408 (9) |
| F8' | 0.2252 (4) | 0.9914 (10) | 0.8809 (5) | 0.122 (4) | 0.408 (9) |
| B1 | 0.4375 (3) | 0.4445 (7) | 0.8168 (2) | 0.114 (2) | |
| B2 | 0.3046 (2) | 0.9579 (6) | 0.88888 (19) | 0.0864 (14) | |
| N1 | 0.45360 (15) | 0.2244 (4) | 0.98903 (13) | 0.0729 (8) | |
| H1A | 0.4072 | 0.2135 | 0.9960 | 0.088* | |
| N2 | 0.69559 (13) | 0.2664 (3) | 0.89217 (10) | 0.0581 (7) | |
| N3 | 0.82774 (12) | 0.3438 (3) | 0.89293 (10) | 0.0527 (6) | |
| N4 | 0.73395 (12) | 0.5557 (3) | 0.87778 (10) | 0.0534 (6) | |
| N5 | 0.89045 (13) | 0.5179 (3) | 0.95504 (10) | 0.0543 (7) | |
| N6 | 0.79994 (13) | 0.7353 (3) | 0.93560 (10) | 0.0531 (6) | |
| N7 | 0.85262 (13) | 0.6938 (3) | 1.03643 (10) | 0.0577 (7) | |
| N8 | 0.86144 (19) | 0.4371 (5) | 1.23672 (13) | 0.0894 (10) | |
| H8 | 0.8720 | 0.4045 | 1.2725 | 0.107* | |
| O1 | 0.87551 (12) | 0.2428 (3) | 0.98316 (10) | 0.0709 (7) | |
| O2 | 0.67268 (12) | 0.7166 (3) | 0.94438 (9) | 0.0708 (7) | |
| O3 | 0.8013 (2) | 0.6342 (5) | 0.77298 (12) | 0.1221 (12) | |
| O5 | 0.97363 (18) | 0.6629 (4) | 0.86828 (18) | 0.1354 (14) | |
| O6 | 0.89909 (15) | 0.8793 (4) | 0.86841 (14) | 0.1023 (9) | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| C1 | 0.073 (2) | 0.074 (2) | 0.059 (2) | 0.0090 (18) | 0.0190 (18) | −0.0043 (17) |
| C2 | 0.0612 (19) | 0.071 (2) | 0.0521 (18) | 0.0020 (16) | 0.0021 (15) | −0.0069 (16) |
| C3 | 0.0543 (17) | 0.061 (2) | 0.0429 (16) | −0.0001 (14) | 0.0046 (13) | 0.0026 (14) |
| C4 | 0.066 (2) | 0.116 (3) | 0.0503 (19) | −0.024 (2) | 0.0123 (16) | −0.0186 (19) |
| C5 | 0.065 (2) | 0.130 (4) | 0.059 (2) | −0.028 (2) | −0.0003 (18) | −0.006 (2) |
| C6 | 0.0514 (17) | 0.087 (2) | 0.0423 (16) | −0.0085 (16) | 0.0040 (13) | 0.0037 (15) |
| C7 | 0.0502 (17) | 0.091 (3) | 0.0416 (16) | 0.0003 (17) | 0.0004 (13) | 0.0024 (16) |
| C8 | 0.0595 (19) | 0.068 (2) | 0.0561 (18) | −0.0004 (16) | 0.0131 (15) | −0.0044 (16) |
| C9 | 0.0419 (15) | 0.065 (2) | 0.0537 (18) | 0.0102 (15) | 0.0086 (13) | 0.0078 (16) |
| C10 | 0.0477 (18) | 0.073 (2) | 0.0424 (16) | 0.0111 (15) | 0.0033 (13) | 0.0159 (15) |
| C11 | 0.0475 (16) | 0.071 (2) | 0.0394 (15) | 0.0035 (14) | 0.0119 (12) | 0.0059 (14) |
| C12 | 0.070 (2) | 0.096 (3) | 0.0443 (19) | −0.004 (2) | 0.0097 (16) | 0.010 (2) |
| O4 | 0.073 (7) | 0.141 (10) | 0.041 (4) | 0.005 (6) | 0.029 (4) | −0.013 (4) |
| C13 | 0.109 (11) | 0.135 (13) | 0.065 (8) | −0.019 (9) | 0.037 (8) | −0.029 (7) |
| C14 | 0.33 (4) | 0.151 (16) | 0.047 (9) | −0.120 (18) | 0.080 (13) | −0.056 (9) |
| C13' | 0.155 (9) | 0.171 (12) | 0.037 (5) | 0.000 (8) | 0.043 (5) | −0.027 (6) |
| C14' | 0.131 (8) | 0.181 (12) | 0.100 (7) | 0.013 (7) | 0.058 (6) | 0.019 (7) |
| O4' | 0.084 (4) | 0.116 (5) | 0.051 (3) | 0.008 (3) | 0.024 (3) | −0.009 (3) |
| C15 | 0.0444 (15) | 0.068 (2) | 0.0463 (16) | 0.0054 (14) | 0.0121 (12) | 0.0079 (14) |
| C16 | 0.066 (2) | 0.077 (3) | 0.067 (2) | 0.0007 (19) | 0.0210 (17) | 0.0095 (19) |
| C17 | 0.131 (4) | 0.119 (4) | 0.207 (7) | −0.017 (4) | 0.073 (5) | 0.059 (4) |
| C18 | 0.157 (6) | 0.196 (7) | 0.298 (10) | −0.108 (6) | 0.110 (7) | −0.109 (7) |
| C19 | 0.0492 (17) | 0.082 (2) | 0.0541 (18) | −0.0028 (16) | −0.0047 (14) | 0.0069 (17) |
| C20 | 0.0609 (18) | 0.068 (2) | 0.0511 (18) | 0.0042 (16) | 0.0077 (14) | 0.0024 (16) |
| C21 | 0.0565 (18) | 0.090 (3) | 0.0429 (16) | −0.0060 (17) | −0.0017 (13) | 0.0052 (16) |
| C22 | 0.0568 (18) | 0.066 (2) | 0.0456 (17) | −0.0060 (15) | 0.0015 (13) | 0.0033 (16) |
| C23 | 0.102 (3) | 0.077 (3) | 0.051 (2) | 0.005 (2) | −0.0010 (18) | 0.0020 (18) |
| C24 | 0.120 (3) | 0.090 (3) | 0.052 (2) | 0.002 (3) | −0.005 (2) | −0.002 (2) |
| C25 | 0.098 (3) | 0.077 (3) | 0.064 (2) | −0.010 (2) | −0.0044 (19) | 0.0000 (19) |
| C26 | 0.109 (3) | 0.076 (3) | 0.085 (3) | −0.003 (2) | −0.012 (2) | 0.019 (2) |
| F1 | 0.336 (19) | 0.150 (13) | 0.173 (12) | 0.027 (11) | −0.087 (12) | −0.006 (10) |
| F2 | 0.159 (6) | 0.071 (3) | 0.085 (4) | −0.006 (3) | −0.032 (4) | −0.028 (2) |
| F3 | 0.193 (9) | 0.149 (6) | 0.136 (5) | 0.006 (5) | 0.004 (5) | −0.070 (4) |
| F4 | 0.154 (6) | 0.135 (6) | 0.243 (12) | 0.009 (5) | −0.098 (8) | −0.046 (7) |
| F1' | 0.232 (18) | 0.161 (10) | 0.140 (8) | −0.009 (11) | −0.036 (9) | −0.106 (7) |
| F2' | 0.34 (2) | 0.216 (16) | 0.103 (7) | 0.143 (15) | −0.038 (12) | −0.037 (9) |
| F3' | 0.142 (8) | 0.093 (9) | 0.080 (7) | 0.024 (6) | −0.034 (6) | −0.010 (6) |
| F4' | 0.162 (11) | 0.31 (2) | 0.28 (2) | −0.112 (15) | −0.040 (13) | 0.107 (18) |
| F5 | 0.102 (4) | 0.128 (4) | 0.102 (4) | 0.020 (3) | −0.023 (3) | 0.024 (3) |
| F6 | 0.100 (4) | 0.181 (7) | 0.105 (4) | −0.050 (4) | −0.017 (3) | 0.065 (4) |
| F7 | 0.088 (3) | 0.096 (3) | 0.040 (2) | 0.007 (2) | 0.0069 (17) | −0.0170 (18) |
| F8 | 0.079 (4) | 0.241 (10) | 0.185 (8) | −0.010 (6) | 0.017 (5) | −0.132 (8) |
| F5' | 0.176 (14) | 0.169 (13) | 0.35 (2) | 0.089 (11) | −0.129 (14) | −0.149 (14) |
| F6' | 0.078 (5) | 0.087 (4) | 0.040 (3) | −0.001 (3) | 0.019 (3) | −0.005 (3) |
| F7' | 0.38 (2) | 0.75 (4) | 0.066 (5) | −0.40 (3) | −0.036 (9) | 0.084 (13) |
| F8' | 0.115 (6) | 0.096 (5) | 0.152 (9) | −0.011 (4) | −0.041 (6) | −0.016 (5) |
| B1 | 0.144 (6) | 0.121 (6) | 0.073 (4) | 0.010 (5) | −0.030 (4) | −0.020 (4) |
| B2 | 0.075 (3) | 0.104 (4) | 0.079 (3) | −0.022 (3) | −0.010 (3) | 0.001 (3) |
| N1 | 0.0493 (15) | 0.094 (2) | 0.076 (2) | −0.0020 (14) | 0.0089 (14) | 0.0145 (17) |
| N2 | 0.0514 (14) | 0.0809 (19) | 0.0426 (14) | −0.0030 (13) | 0.0077 (11) | 0.0029 (12) |
| N3 | 0.0486 (13) | 0.0657 (17) | 0.0446 (13) | 0.0046 (12) | 0.0099 (10) | 0.0045 (12) |
| N4 | 0.0462 (14) | 0.0745 (18) | 0.0398 (13) | 0.0085 (12) | 0.0047 (10) | 0.0058 (12) |
| N5 | 0.0453 (13) | 0.0681 (18) | 0.0495 (14) | 0.0053 (12) | 0.0027 (11) | 0.0071 (12) |
| N6 | 0.0493 (14) | 0.0675 (17) | 0.0432 (13) | 0.0062 (12) | 0.0081 (10) | 0.0060 (11) |
| N7 | 0.0521 (14) | 0.0757 (18) | 0.0452 (14) | 0.0003 (13) | 0.0016 (11) | 0.0054 (13) |
| N8 | 0.110 (3) | 0.104 (3) | 0.0519 (18) | −0.011 (2) | −0.0121 (16) | 0.0194 (19) |
| O1 | 0.0749 (15) | 0.0727 (16) | 0.0645 (14) | 0.0119 (12) | −0.0024 (11) | 0.0169 (12) |
| O2 | 0.0494 (12) | 0.1031 (19) | 0.0607 (13) | 0.0187 (12) | 0.0108 (10) | −0.0037 (12) |
| O3 | 0.174 (3) | 0.138 (3) | 0.0563 (16) | 0.045 (2) | 0.0260 (18) | 0.0357 (18) |
| O5 | 0.084 (2) | 0.127 (3) | 0.202 (4) | 0.016 (2) | 0.079 (2) | 0.053 (3) |
| O6 | 0.0888 (18) | 0.091 (2) | 0.131 (2) | −0.0037 (16) | 0.0438 (17) | 0.0360 (18) |
Geometric parameters (Å, °) top
| C1—N1 | 1.334 (4) | C15—C16 | 1.553 (4) |
| C1—C2 | 1.364 (5) | C16—O5 | 1.169 (4) |
| C1—H1 | 0.9300 | C16—O6 | 1.269 (4) |
| C2—C3 | 1.382 (4) | C17—C18 | 1.482 (9) |
| C2—H2 | 0.9300 | C17—O6 | 1.487 (5) |
| C3—C4 | 1.377 (4) | C17—H17A | 0.9700 |
| C3—C6 | 1.499 (4) | C17—H17B | 0.9700 |
| C4—C5 | 1.348 (5) | C18—H18A | 0.9600 |
| C4—H4 | 0.9300 | C18—H18B | 0.9600 |
| C5—N1 | 1.314 (5) | C18—H18C | 0.9600 |
| C5—H5 | 0.9300 | C19—N7 | 1.452 (4) |
| C6—N2 | 1.462 (4) | C19—N5 | 1.470 (4) |
| C6—H6A | 0.9700 | C19—H19A | 0.9700 |
| C6—H6B | 0.9700 | C19—H19B | 0.9700 |
| C7—N4 | 1.458 (4) | C20—N7 | 1.441 (4) |
| C7—N2 | 1.461 (4) | C20—N6 | 1.485 (4) |
| C7—H7A | 0.9700 | C20—H20A | 0.9700 |
| C7—H7B | 0.9700 | C20—H20B | 0.9700 |
| C8—N2 | 1.457 (4) | C21—N7 | 1.478 (4) |
| C8—N3 | 1.480 (4) | C21—C22 | 1.503 (4) |
| C8—H8A | 0.9700 | C21—H21A | 0.9700 |
| C8—H8B | 0.9700 | C21—H21B | 0.9700 |
| C9—O1 | 1.205 (3) | C22—C25 | 1.368 (5) |
| C9—N5 | 1.369 (4) | C22—C23 | 1.370 (5) |
| C9—N3 | 1.395 (4) | C23—C24 | 1.386 (5) |
| C10—O2 | 1.219 (3) | C23—H23 | 0.9300 |
| C10—N4 | 1.365 (4) | C24—N8 | 1.319 (5) |
| C10—N6 | 1.379 (4) | C24—H24 | 0.9300 |
| C11—N3 | 1.445 (4) | C25—C26 | 1.367 (5) |
| C11—N4 | 1.454 (4) | C25—H25 | 0.9300 |
| C11—C15 | 1.551 (4) | C26—N8 | 1.325 (5) |
| C11—C12 | 1.554 (4) | C26—H26 | 0.9300 |
| C12—O3 | 1.161 (4) | F1—B1 | 1.341 (7) |
| C12—O4 | 1.258 (11) | F2—B1 | 1.302 (7) |
| C12—O4' | 1.351 (8) | F3—B1 | 1.431 (7) |
| O4—C13 | 1.402 (9) | F4—B1 | 1.363 (7) |
| C13—C14 | 1.497 (10) | F1'—B1 | 1.296 (8) |
| C13—H13A | 0.9700 | F2'—B1 | 1.418 (8) |
| C13—H13B | 0.9700 | F3'—B1 | 1.379 (7) |
| C14—H14A | 0.9600 | F4'—B1 | 1.345 (8) |
| C14—H14B | 0.9600 | F5—B2 | 1.332 (5) |
| C14—H14C | 0.9600 | F6—B2 | 1.370 (6) |
| C13'—O4' | 1.427 (7) | F7—B2 | 1.409 (5) |
| C13'—C14' | 1.480 (9) | F8—B2 | 1.352 (6) |
| C13'—H13C | 0.9700 | F5'—B2 | 1.301 (8) |
| C13'—H13D | 0.9700 | F6'—B2 | 1.380 (7) |
| C14'—H14D | 0.9600 | F7'—B2 | 1.319 (7) |
| C14'—H14E | 0.9600 | F8'—B2 | 1.451 (7) |
| C14'—H14F | 0.9600 | N1—H1A | 0.8600 |
| C15—N6 | 1.451 (4) | N8—H8 | 0.8600 |
| C15—N5 | 1.456 (4) | | |
| | | |
| N1—C1—C2 | 119.5 (3) | H20A—C20—H20B | 107.8 |
| N1—C1—H1 | 120.2 | N7—C21—C22 | 110.7 (2) |
| C2—C1—H1 | 120.2 | N7—C21—H21A | 109.5 |
| C1—C2—C3 | 120.4 (3) | C22—C21—H21A | 109.5 |
| C1—C2—H2 | 119.8 | N7—C21—H21B | 109.5 |
| C3—C2—H2 | 119.8 | C22—C21—H21B | 109.5 |
| C4—C3—C2 | 117.2 (3) | H21A—C21—H21B | 108.1 |
| C4—C3—C6 | 121.9 (3) | C25—C22—C23 | 118.4 (3) |
| C2—C3—C6 | 121.0 (3) | C25—C22—C21 | 120.7 (3) |
| C5—C4—C3 | 120.6 (3) | C23—C22—C21 | 120.8 (3) |
| C5—C4—H4 | 119.7 | C22—C23—C24 | 120.2 (4) |
| C3—C4—H4 | 119.7 | C22—C23—H23 | 119.9 |
| N1—C5—C4 | 120.7 (3) | C24—C23—H23 | 119.9 |
| N1—C5—H5 | 119.7 | N8—C24—C23 | 118.1 (4) |
| C4—C5—H5 | 119.7 | N8—C24—H24 | 120.9 |
| N2—C6—C3 | 112.6 (2) | C23—C24—H24 | 120.9 |
| N2—C6—H6A | 109.1 | C26—C25—C22 | 120.6 (4) |
| C3—C6—H6A | 109.1 | C26—C25—H25 | 119.7 |
| N2—C6—H6B | 109.1 | C22—C25—H25 | 119.7 |
| C3—C6—H6B | 109.1 | N8—C26—C25 | 118.5 (4) |
| H6A—C6—H6B | 107.8 | N8—C26—H26 | 120.7 |
| N4—C7—N2 | 112.9 (2) | C25—C26—H26 | 120.7 |
| N4—C7—H7A | 109.0 | F1'—B1—F2 | 126.6 (8) |
| N2—C7—H7A | 109.0 | F1'—B1—F1 | 118.5 (11) |
| N4—C7—H7B | 109.0 | F2—B1—F1 | 113.4 (6) |
| N2—C7—H7B | 109.0 | F1'—B1—F4' | 115.7 (8) |
| H7A—C7—H7B | 107.8 | F2—B1—F4' | 66.5 (10) |
| N2—C8—N3 | 112.9 (2) | F1—B1—F4' | 98.4 (9) |
| N2—C8—H8A | 109.0 | F1'—B1—F4 | 34.4 (7) |
| N3—C8—H8A | 109.0 | F2—B1—F4 | 111.9 (6) |
| N2—C8—H8B | 109.0 | F1—B1—F4 | 113.1 (7) |
| N3—C8—H8B | 109.0 | F4'—B1—F4 | 144.5 (8) |
| H8A—C8—H8B | 107.8 | F1'—B1—F3' | 115.0 (8) |
| O1—C9—N5 | 126.7 (3) | F2—B1—F3' | 113.7 (7) |
| O1—C9—N3 | 125.4 (3) | F1—B1—F3' | 10.4 (10) |
| N5—C9—N3 | 107.8 (3) | F4'—B1—F3' | 108.2 (6) |
| O2—C10—N4 | 125.7 (3) | F4—B1—F3' | 104.5 (8) |
| O2—C10—N6 | 125.2 (3) | F1'—B1—F2' | 106.6 (7) |
| N4—C10—N6 | 109.0 (2) | F2—B1—F2' | 40.3 (9) |
| N3—C11—N4 | 111.4 (2) | F1—B1—F2' | 110.4 (9) |
| N3—C11—C15 | 104.2 (2) | F4'—B1—F2' | 106.7 (8) |
| N4—C11—C15 | 103.0 (2) | F4—B1—F2' | 78.0 (8) |
| N3—C11—C12 | 113.5 (3) | F3'—B1—F2' | 103.6 (7) |
| N4—C11—C12 | 109.2 (2) | F1'—B1—F3 | 69.1 (7) |
| C15—C11—C12 | 115.0 (3) | F2—B1—F3 | 107.8 (5) |
| O3—C12—O4 | 120.7 (6) | F1—B1—F3 | 106.6 (7) |
| O3—C12—O4' | 124.0 (4) | F4'—B1—F3 | 49.9 (9) |
| O4—C12—O4' | 36.7 (5) | F4—B1—F3 | 103.2 (5) |
| O3—C12—C11 | 122.0 (4) | F3'—B1—F3 | 115.3 (7) |
| O4—C12—C11 | 110.9 (5) | F2'—B1—F3 | 139.0 (9) |
| O4'—C12—C11 | 112.9 (4) | F5'—B2—F7' | 117.6 (8) |
| C12—O4—C13 | 116.8 (11) | F5'—B2—F5 | 105.4 (7) |
| O4—C13—C14 | 109.2 (9) | F7'—B2—F5 | 71.4 (6) |
| O4—C13—H13A | 109.8 | F5'—B2—F8 | 136.1 (8) |
| C14—C13—H13A | 109.8 | F7'—B2—F8 | 92.5 (8) |
| O4—C13—H13B | 109.8 | F5—B2—F8 | 114.7 (6) |
| C14—C13—H13B | 109.8 | F5'—B2—F6 | 34.6 (8) |
| H13A—C13—H13B | 108.3 | F7'—B2—F6 | 152.2 (9) |
| O4'—C13'—C14' | 108.9 (7) | F5—B2—F6 | 110.6 (5) |
| O4'—C13'—H13C | 109.9 | F8—B2—F6 | 110.3 (6) |
| C14'—C13'—H13C | 109.9 | F5'—B2—F6' | 113.5 (7) |
| O4'—C13'—H13D | 109.9 | F7'—B2—F6' | 108.1 (6) |
| C14'—C13'—H13D | 109.9 | F5—B2—F6' | 134.5 (6) |
| H13C—C13'—H13D | 108.3 | F8—B2—F6' | 22.6 (6) |
| C13'—C14'—H14D | 109.5 | F6—B2—F6' | 90.3 (5) |
| C13'—C14'—H14E | 109.5 | F5'—B2—F7 | 75.6 (8) |
| H14D—C14'—H14E | 109.5 | F7'—B2—F7 | 49.8 (10) |
| C13'—C14'—H14F | 109.5 | F5—B2—F7 | 107.3 (4) |
| H14D—C14'—H14F | 109.5 | F8—B2—F7 | 107.3 (5) |
| H14E—C14'—H14F | 109.5 | F6—B2—F7 | 106.2 (5) |
| C12—O4'—C13' | 117.0 (7) | F6'—B2—F7 | 104.6 (5) |
| N6—C15—N5 | 111.1 (2) | F5'—B2—F8' | 105.7 (6) |
| N6—C15—C11 | 104.2 (2) | F7'—B2—F8' | 106.7 (7) |
| N5—C15—C11 | 102.9 (2) | F5—B2—F8' | 40.6 (4) |
| N6—C15—C16 | 114.1 (3) | F8—B2—F8' | 94.0 (6) |
| N5—C15—C16 | 109.3 (2) | F6—B2—F8' | 88.0 (5) |
| C11—C15—C16 | 114.6 (2) | F6'—B2—F8' | 104.1 (6) |
| O5—C16—O6 | 126.9 (3) | F7—B2—F8' | 147.7 (6) |
| O5—C16—C15 | 120.7 (4) | C5—N1—C1 | 121.6 (3) |
| O6—C16—C15 | 112.3 (3) | C5—N1—H1A | 119.2 |
| C18—C17—O6 | 109.4 (6) | C1—N1—H1A | 119.2 |
| C18—C17—H17A | 109.8 | C8—N2—C7 | 110.2 (2) |
| O6—C17—H17A | 109.8 | C8—N2—C6 | 113.8 (2) |
| C18—C17—H17B | 109.8 | C7—N2—C6 | 112.8 (3) |
| O6—C17—H17B | 109.8 | C9—N3—C11 | 110.8 (2) |
| H17A—C17—H17B | 108.2 | C9—N3—C8 | 122.2 (2) |
| C17—C18—H18A | 109.5 | C11—N3—C8 | 115.4 (2) |
| C17—C18—H18B | 109.5 | C10—N4—C11 | 111.6 (2) |
| H18A—C18—H18B | 109.5 | C10—N4—C7 | 124.8 (2) |
| C17—C18—H18C | 109.5 | C11—N4—C7 | 115.7 (2) |
| H18A—C18—H18C | 109.5 | C9—N5—C15 | 112.1 (2) |
| H18B—C18—H18C | 109.5 | C9—N5—C19 | 124.0 (3) |
| N7—C19—N5 | 113.0 (2) | C15—N5—C19 | 115.7 (3) |
| N7—C19—H19A | 109.0 | C10—N6—C15 | 110.3 (2) |
| N5—C19—H19A | 109.0 | C10—N6—C20 | 123.7 (2) |
| N7—C19—H19B | 109.0 | C15—N6—C20 | 114.9 (2) |
| N5—C19—H19B | 109.0 | C20—N7—C19 | 111.1 (2) |
| H19A—C19—H19B | 107.8 | C20—N7—C21 | 114.6 (2) |
| N7—C20—N6 | 113.1 (3) | C19—N7—C21 | 112.4 (3) |
| N7—C20—H20A | 109.0 | C24—N8—C26 | 124.0 (3) |
| N6—C20—H20A | 109.0 | C24—N8—H8 | 118.0 |
| N7—C20—H20B | 109.0 | C26—N8—H8 | 118.0 |
| N6—C20—H20B | 109.0 | C16—O6—C17 | 116.6 (3) |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| C5—H5···F7i | 0.93 | 2.24 | 3.124 (6) | 158 |
| N1—H1A···O2ii | 0.86 | 2.09 | 2.825 (4) | 143 |
| C1—H1···F1'ii | 0.93 | 2.16 | 2.882 (8) | 134 |
| C2—H2···F3ii | 0.93 | 2.42 | 3.213 (8) | 143 |
| C20—H20B···F8iii | 0.97 | 2.29 | 3.215 (8) | 160 |
| C21—H21B···F8iii | 0.97 | 2.47 | 3.345 (10) | 149 |
| C23—H23···F5iii | 0.93 | 2.33 | 3.191 (7) | 154 |
| C24—H24···F3'iv | 0.93 | 2.57 | 3.264 (10) | 132 |
| C26—H26···F1v | 0.93 | 2.48 | 3.337 (14) | 154 |
| C7—H7B···F4 | 0.97 | 2.46 | 3.273 (9) | 142 |
| Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y+1, −z+2; (iii) −x+1, −y+2, −z+2; (iv) x+1/2, −y+3/2, z+1/2; (v) x+1/2, −y+1/2, z+1/2. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| C5—H5···F7i | 0.93 | 2.24 | 3.124 (6) | 158 |
| N1—H1A···O2ii | 0.86 | 2.09 | 2.825 (4) | 143 |
| C1—H1···F1'ii | 0.93 | 2.16 | 2.882 (8) | 134 |
| C2—H2···F3ii | 0.93 | 2.42 | 3.213 (8) | 143 |
| C20—H20B···F8iii | 0.97 | 2.29 | 3.215 (8) | 160 |
| C21—H21B···F8iii | 0.97 | 2.47 | 3.345 (10) | 149 |
| C23—H23···F5iii | 0.93 | 2.33 | 3.191 (7) | 154 |
| C24—H24···F3'iv | 0.93 | 2.57 | 3.264 (10) | 132 |
| C26—H26···F1v | 0.93 | 2.48 | 3.337 (14) | 154 |
| C7—H7B···F4 | 0.97 | 2.46 | 3.273 (9) | 142 |
| Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y+1, −z+2; (iii) −x+1, −y+2, −z+2; (iv) x+1/2, −y+3/2, z+1/2; (v) x+1/2, −y+1/2, z+1/2. |
The authors thank Dr Meng Xiang-Gao for the X-ray data collection, and Gansu
Province Key Technology R&D Program (No. 0708GKCA041) for financial support.
Bruker (2001). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
Wei, F.-Q. & Wu, A.-X. (2005). Acta Cryst. E61, o1453–o1455.
Wu, A., Fettinger, J. C. & Isaacs, L. (2002). Tetrahedron, 58, 9769–9777.
Glycoluril derivatives have many areas of applications, such as explosives, slow-release fertilizers, crosslinkers, iodogens, stabilisers of organic compounds against photodegradation, and reagent in combinatorial chemistry (Wu et al., 2002). In continuation of our previous studies in this area (Wei & Wu, 2005), we present the crystal structure of the title compound, (I) (Fig. 1).
All the geometrical parameters for (I) are normal - the distance between the two carbonyl oxygen atoms (O1 and O2) of the glycoluril moiety is 5.238 (5) Å. The distance between the centers of the two pyridyl rings is 7.386 (7) Å. Two pyridyl rings form a dihedral angle of 86.9 (3)°. The crystal packing is stabilized by intermolecular N—H···O, C—H···F and N—H···F interactions (Table 1).