supplementary materials

Piperidinium 3-hydroxy-2-naphthoate
3-Hydroxy-2-naphthoic acid (94 mg, 0.5 mmol) and piperidine (43 mg, 0.5 mmol)
were dissolved in methanol (5 ml) and water (1 ml) at room temperature. The
single crystals of the title compound were obtained from the solution after
several days.
H atoms were placed in calculated positions with O—H = 0.82, N—H = 0.96,
C—H = 0.93 (aromatic) or 0.97 Å (methylene), and refined in riding mode
with Uiso(H) = 1.5Ueq(O,N) and 1.2Uiso(C).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Piperidinium 3-hydroxy-2-naphthoate
top
Crystal data top
| C5H12N+·C11H7O3− | F(000) = 584 |
| Mr = 273.32 | Dx = 1.210 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2yn | Cell parameters from 1627 reflections |
| a = 8.6683 (3) Å | θ = 2.5–20.5° |
| b = 19.4537 (5) Å | µ = 0.08 mm−1 |
| c = 9.5932 (3) Å | T = 298 K |
| β = 111.959 (2)° | Block, colourless |
| V = 1500.34 (8) Å3 | 0.40 × 0.30 × 0.20 mm |
| Z = 4 | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 1512 reflections with I > σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.035 |
| graphite | θmax = 27.4°, θmin = 2.1° |
| φ and ω scans | h = −9→11 |
| 10640 measured reflections | k = −25→22 |
| 3385 independent reflections | l = −12→12 |
Refinement top
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.160 | H-atom parameters constrained |
| S = 0.99 | w = 1/[σ2(Fo2) + (0.0733P)2] where P = (Fo2 + 2Fc2)/3 |
| 3385 reflections | (Δ/σ)max < 0.001 |
| 181 parameters | Δρmax = 0.13 e Å−3 |
| 0 restraints | Δρmin = −0.13 e Å−3 |
Crystal data top
| C5H12N+·C11H7O3− | V = 1500.34 (8) Å3 |
| Mr = 273.32 | Z = 4 |
| Monoclinic, P21/n | Mo Kα radiation |
| a = 8.6683 (3) Å | µ = 0.08 mm−1 |
| b = 19.4537 (5) Å | T = 298 K |
| c = 9.5932 (3) Å | 0.40 × 0.30 × 0.20 mm |
| β = 111.959 (2)° | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 1512 reflections with I > σ(I) |
| 10640 measured reflections | Rint = 0.035 |
| 3385 independent reflections | θmax = 27.4° |
Refinement top
| R[F2 > 2σ(F2)] = 0.048 | H-atom parameters constrained |
| wR(F2) = 0.160 | Δρmax = 0.13 e Å−3 |
| S = 0.99 | Δρmin = −0.13 e Å−3 |
| 3385 reflections | Absolute structure: ? |
| 181 parameters | Flack parameter: ? |
| 0 restraints | Rogers parameter: ? |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| N1 | −0.1726 (2) | 0.09197 (8) | 0.39856 (18) | 0.0718 (5) | |
| H1C | −0.1979 | 0.0491 | 0.4346 | 0.108* | |
| H1D | −0.0626 | 0.1054 | 0.4635 | 0.108* | |
| O1 | 0.31760 (19) | 0.22455 (7) | 0.73435 (18) | 0.0944 (5) | |
| H1B | 0.2331 | 0.2051 | 0.6786 | 0.142* | |
| O2 | 0.24997 (18) | 0.03674 (7) | 0.51894 (15) | 0.0832 (5) | |
| O3 | 0.14101 (19) | 0.13370 (8) | 0.56381 (18) | 0.0948 (5) | |
| C1 | 0.6069 (3) | 0.20988 (10) | 0.8318 (2) | 0.0692 (6) | |
| H1A | 0.6176 | 0.2530 | 0.8763 | 0.083* | |
| C2 | 0.4523 (3) | 0.18561 (9) | 0.7481 (2) | 0.0636 (5) | |
| C3 | 0.4321 (2) | 0.12071 (9) | 0.67629 (19) | 0.0561 (5) | |
| C4 | 0.5718 (3) | 0.08253 (9) | 0.69633 (19) | 0.0604 (5) | |
| H4A | 0.5597 | 0.0398 | 0.6498 | 0.072* | |
| C5 | 0.7325 (3) | 0.10544 (10) | 0.7844 (2) | 0.0629 (5) | |
| C6 | 0.8758 (3) | 0.06627 (12) | 0.8062 (3) | 0.0930 (7) | |
| H6A | 0.8654 | 0.0229 | 0.7626 | 0.112* | |
| C7 | 1.0287 (3) | 0.09073 (16) | 0.8897 (3) | 0.1178 (10) | |
| H7A | 1.1223 | 0.0642 | 0.9027 | 0.141* | |
| C8 | 1.0468 (3) | 0.15586 (15) | 0.9569 (3) | 0.1102 (9) | |
| H8A | 1.1524 | 0.1724 | 1.0137 | 0.132* | |
| C9 | 0.9119 (3) | 0.19463 (12) | 0.9394 (2) | 0.0838 (6) | |
| H9A | 0.9256 | 0.2375 | 0.9852 | 0.101* | |
| C10 | 0.7497 (3) | 0.17107 (10) | 0.8523 (2) | 0.0623 (5) | |
| C11 | 0.2638 (3) | 0.09412 (11) | 0.5796 (2) | 0.0669 (6) | |
| C12 | −0.2927 (3) | 0.14545 (10) | 0.4042 (2) | 0.0772 (6) | |
| H12A | −0.2619 | 0.1895 | 0.3749 | 0.093* | |
| H12B | −0.2893 | 0.1495 | 0.5061 | 0.093* | |
| C13 | −0.4652 (3) | 0.12680 (12) | 0.3005 (3) | 0.0900 (7) | |
| H13A | −0.5412 | 0.1634 | 0.3004 | 0.108* | |
| H13B | −0.5001 | 0.0853 | 0.3366 | 0.108* | |
| C14 | −0.4732 (3) | 0.11527 (13) | 0.1424 (3) | 0.0995 (8) | |
| H14A | −0.5837 | 0.0996 | 0.0798 | 0.119* | |
| H14B | −0.4525 | 0.1583 | 0.1015 | 0.119* | |
| C15 | −0.3471 (3) | 0.06288 (13) | 0.1397 (2) | 0.0857 (7) | |
| H15A | −0.3759 | 0.0184 | 0.1690 | 0.103* | |
| H15B | −0.3490 | 0.0589 | 0.0383 | 0.103* | |
| C16 | −0.1763 (3) | 0.08263 (11) | 0.2440 (3) | 0.0852 (7) | |
| H16A | −0.0979 | 0.0471 | 0.2439 | 0.102* | |
| H16B | −0.1434 | 0.1251 | 0.2097 | 0.102* | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| N1 | 0.0655 (12) | 0.0642 (11) | 0.0731 (11) | −0.0064 (8) | 0.0116 (9) | 0.0044 (8) |
| O1 | 0.0755 (11) | 0.0761 (10) | 0.1167 (13) | 0.0101 (8) | 0.0186 (9) | −0.0260 (8) |
| O2 | 0.0942 (12) | 0.0604 (9) | 0.0768 (10) | −0.0154 (7) | 0.0110 (8) | −0.0074 (7) |
| O3 | 0.0677 (11) | 0.0869 (11) | 0.1111 (13) | −0.0032 (9) | 0.0121 (9) | −0.0172 (9) |
| C1 | 0.0774 (16) | 0.0539 (11) | 0.0683 (13) | −0.0059 (11) | 0.0182 (12) | −0.0120 (9) |
| C2 | 0.0689 (15) | 0.0538 (12) | 0.0641 (12) | 0.0031 (11) | 0.0203 (11) | −0.0032 (9) |
| C3 | 0.0682 (14) | 0.0483 (10) | 0.0481 (10) | −0.0035 (9) | 0.0176 (9) | 0.0014 (8) |
| C4 | 0.0753 (15) | 0.0505 (11) | 0.0529 (11) | −0.0009 (10) | 0.0211 (10) | −0.0031 (8) |
| C5 | 0.0656 (14) | 0.0660 (13) | 0.0545 (11) | 0.0015 (11) | 0.0192 (10) | −0.0012 (9) |
| C6 | 0.0789 (19) | 0.0897 (16) | 0.0979 (17) | 0.0125 (14) | 0.0187 (14) | −0.0205 (13) |
| C7 | 0.071 (2) | 0.130 (2) | 0.131 (2) | 0.0165 (16) | 0.0138 (17) | −0.0327 (19) |
| C8 | 0.0669 (19) | 0.126 (2) | 0.119 (2) | −0.0029 (16) | 0.0122 (15) | −0.0265 (18) |
| C9 | 0.0794 (17) | 0.0836 (15) | 0.0786 (15) | −0.0114 (13) | 0.0181 (13) | −0.0138 (12) |
| C10 | 0.0655 (14) | 0.0637 (13) | 0.0536 (11) | −0.0056 (10) | 0.0174 (10) | −0.0023 (9) |
| C11 | 0.0755 (16) | 0.0566 (13) | 0.0604 (12) | −0.0084 (12) | 0.0160 (11) | 0.0031 (10) |
| C12 | 0.1010 (19) | 0.0594 (13) | 0.0748 (14) | −0.0006 (12) | 0.0371 (14) | 0.0028 (10) |
| C13 | 0.0788 (18) | 0.0879 (16) | 0.1040 (19) | 0.0125 (13) | 0.0351 (15) | 0.0085 (14) |
| C14 | 0.0805 (18) | 0.116 (2) | 0.0847 (17) | 0.0087 (15) | 0.0112 (13) | 0.0173 (15) |
| C15 | 0.0853 (19) | 0.1038 (18) | 0.0645 (13) | −0.0124 (14) | 0.0239 (13) | −0.0070 (12) |
| C16 | 0.0800 (18) | 0.0910 (16) | 0.0915 (16) | −0.0034 (13) | 0.0401 (14) | −0.0088 (13) |
Geometric parameters (Å, °) top
| N1—C12 | 1.487 (2) | C7—C8 | 1.403 (3) |
| N1—C16 | 1.482 (3) | C7—H7A | 0.9300 |
| N1—H1C | 0.9601 | C8—C9 | 1.348 (3) |
| N1—H1D | 0.9600 | C8—H8A | 0.9300 |
| O1—C2 | 1.357 (2) | C9—C10 | 1.417 (3) |
| O1—H1B | 0.8200 | C9—H9A | 0.9300 |
| O2—C11 | 1.244 (2) | C12—C13 | 1.498 (3) |
| O3—C11 | 1.276 (2) | C12—H12A | 0.9700 |
| C1—C2 | 1.363 (3) | C12—H12B | 0.9700 |
| C1—C10 | 1.400 (3) | C13—C14 | 1.509 (3) |
| C1—H1A | 0.9300 | C13—H13A | 0.9700 |
| C2—C3 | 1.417 (2) | C13—H13B | 0.9700 |
| C3—C4 | 1.372 (3) | C14—C15 | 1.502 (3) |
| C3—C11 | 1.498 (3) | C14—H14A | 0.9700 |
| C4—C5 | 1.404 (3) | C14—H14B | 0.9700 |
| C4—H4A | 0.9300 | C15—C16 | 1.494 (3) |
| C5—C6 | 1.404 (3) | C15—H15A | 0.9700 |
| C5—C10 | 1.416 (2) | C15—H15B | 0.9700 |
| C6—C7 | 1.353 (3) | C16—H16A | 0.9700 |
| C6—H6A | 0.9300 | C16—H16B | 0.9700 |
| | | |
| C12—N1—C16 | 111.63 (16) | C1—C10—C9 | 122.6 (2) |
| C12—N1—H1C | 109.7 | C5—C10—C9 | 118.3 (2) |
| C16—N1—H1C | 109.4 | O2—C11—O3 | 123.8 (2) |
| C12—N1—H1D | 108.9 | O2—C11—C3 | 120.0 (2) |
| C16—N1—H1D | 109.2 | O3—C11—C3 | 116.16 (19) |
| H1C—N1—H1D | 108.0 | N1—C12—C13 | 110.18 (17) |
| C2—O1—H1B | 109.5 | N1—C12—H12A | 109.6 |
| C2—C1—C10 | 121.22 (18) | C13—C12—H12A | 109.6 |
| C2—C1—H1A | 119.4 | N1—C12—H12B | 109.6 |
| C10—C1—H1A | 119.4 | C13—C12—H12B | 109.6 |
| O1—C2—C1 | 118.97 (18) | H12A—C12—H12B | 108.1 |
| O1—C2—C3 | 120.30 (19) | C12—C13—C14 | 111.27 (19) |
| C1—C2—C3 | 120.74 (19) | C12—C13—H13A | 109.4 |
| C4—C3—C2 | 118.14 (18) | C14—C13—H13A | 109.4 |
| C4—C3—C11 | 120.27 (18) | C12—C13—H13B | 109.4 |
| C2—C3—C11 | 121.58 (19) | C14—C13—H13B | 109.4 |
| C3—C4—C5 | 122.53 (18) | H13A—C13—H13B | 108.0 |
| C3—C4—H4A | 118.7 | C15—C14—C13 | 110.99 (19) |
| C5—C4—H4A | 118.7 | C15—C14—H14A | 109.4 |
| C6—C5—C4 | 122.70 (19) | C13—C14—H14A | 109.4 |
| C6—C5—C10 | 119.1 (2) | C15—C14—H14B | 109.4 |
| C4—C5—C10 | 118.21 (18) | C13—C14—H14B | 109.4 |
| C7—C6—C5 | 120.9 (2) | H14A—C14—H14B | 108.0 |
| C7—C6—H6A | 119.6 | C16—C15—C14 | 111.0 (2) |
| C5—C6—H6A | 119.6 | C16—C15—H15A | 109.4 |
| C6—C7—C8 | 120.4 (2) | C14—C15—H15A | 109.4 |
| C6—C7—H7A | 119.8 | C16—C15—H15B | 109.4 |
| C8—C7—H7A | 119.8 | C14—C15—H15B | 109.4 |
| C9—C8—C7 | 120.3 (2) | H15A—C15—H15B | 108.0 |
| C9—C8—H8A | 119.8 | N1—C16—C15 | 110.30 (17) |
| C7—C8—H8A | 119.8 | N1—C16—H16A | 109.6 |
| C8—C9—C10 | 121.0 (2) | C15—C16—H16A | 109.6 |
| C8—C9—H9A | 119.5 | N1—C16—H16B | 109.6 |
| C10—C9—H9A | 119.5 | C15—C16—H16B | 109.6 |
| C1—C10—C5 | 119.13 (19) | H16A—C16—H16B | 108.1 |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1B···O3 | 0.82 | 1.77 | 2.504 (2) | 149 |
| N1—H1C···O2i | 0.96 | 1.83 | 2.783 (2) | 173 |
| N1—H1D···O3 | 0.96 | 1.75 | 2.709 (2) | 173 |
| C12—H12A···O1ii | 0.97 | 2.40 | 3.336 (3) | 161 |
| Symmetry codes: (i) −x, −y, −z+1; (ii) x−1/2, −y+1/2, z−1/2. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1B···O3 | 0.82 | 1.77 | 2.504 (2) | 149 |
| N1—H1C···O2i | 0.96 | 1.83 | 2.783 (2) | 173 |
| N1—H1D···O3 | 0.96 | 1.75 | 2.709 (2) | 173 |
| C12—H12A···O1ii | 0.97 | 2.40 | 3.336 (3) | 161 |
| Symmetry codes: (i) −x, −y, −z+1; (ii) x−1/2, −y+1/2, z−1/2. |
Y-TW thanks the Starting Fund of Shandong Institute of Light Industry for
financial support.
Bruker (2001). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
Shen, H., Nie, J.-J. & Xu, D.-J. (2008). Acta Cryst. E64, o1146–o1147.
Wang, Y.-T., Tang, G.-M. & Qin, D.-W. (2005a). Acta Cryst. E61, o3623–o3624.
Wang, Y.-T., Tang, G.-M. & Qin, D.-W. (2005b). Acta Cryst. E61, o3979–o3980.
Wang, Y.-T., Tang, G.-M. & Qin, X.-Y. (2006). Acta Cryst. E62, o1496–o1497.
In some biological system, intermolecular interactions play the important role (Shen et al., 2008), these interactions have attracted our much attention in past years. A series of compounds with weak intermolecular interactions have been synthesized and their crystal structures have been characterized (Wang et al., 2005a,b, 2006). As part of our investigation, we recently prepared the title compound and present here its crystal structure.
The molecular structure of the title compound is shown in Fig. 1. The asymmetric unit contains one 3-hydroxy-2-naphthoate anion and one piperidinium cation. The piperidinium cation displays a typical chair conformation. The carboxylate group is coplanar with the naphthalene ring. Intermolecular N—H···O and C—H···O hydrogen bonding presents in the crystal structure (Table 1).