organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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(1S,5R)-1-(3,4-Di­chloro­phen­yl)-3-oxa­bi­cyclo­[3.1.0]hexan-2-one

aDepartment of Chemistry, University of Oslo, P.O.Box 1033 Blindern, N-0315 Oslo, Norway
*Correspondence e-mail: c.h.gorbitz@kjemi.uio.no

(Received 30 January 2009; accepted 2 March 2009; online 6 March 2009)

The absolute structure has been determined by X-ray analysis for the title compound, C11H8Cl2O2. The five-membered ring of the mol­ecule is best described as a flattened envelope conformation with the methyl­ene C atom located 0.208 (2) Å below the plane formed by the other four atoms. A weak intermolecular C—H⋯O hydrogen bond is present in the crystal structure

Related literature

The title compound was prepared as an inter­mediate in the search for potential triple neurotransmittor reuptake inhibitors, see: Milewska et al. (1996[Milewska, M. J., Gdaniec, M. & Poloński, T. (1996). Tetrahedron Asymmetry, 7, 3169-3180.]); Lin & Charette (2005[Lin, W. & Charette, A. B. (2005). Adv. Synth. Catal. 347, 1547-1552.]); Tsuji et al. (1999[Tsuji, T., Onishi, T. & Sakata, K. (1999). Tetrahedron Asymmetry, 10, 3819-3825.]); Džolić et al. (2003[Džolić, Z., Krištafor, V., Cetina, M., Nagl, A., Hergold-Brundić, A., Mrvoš-Sermek, D., Burgemeister, T., Grdiša, M., Slade, N., Pavelic, K., Balzarini, J., De Clercq, E. & Mintas, M. (2003). Nucleosides Nucleotides Nucleic Acids, 22, 373-389.]).

[Scheme 1]

Experimental

Crystal data
  • C11H8Cl2O2

  • Mr = 243.07

  • Orthorhombic, P 21 21 21

  • a = 7.0597 (4) Å

  • b = 11.1343 (7) Å

  • c = 12.6756 (8) Å

  • V = 996.36 (11) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.62 mm−1

  • T = 102 K

  • 0.58 × 0.36 × 0.18 mm

Data collection
  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 1996[Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.]) Tmin = 0.680, Tmax = 0.894

  • 8562 measured reflections

  • 2341 independent reflections

  • 2278 reflections with I > 2σ(I)

  • Rint = 0.018

Refinement
  • R[F2 > 2σ(F2)] = 0.024

  • wR(F2) = 0.063

  • S = 1.10

  • 2341 reflections

  • 160 parameters

  • Only H-atom coordinates refined

  • Δρmax = 0.43 e Å−3

  • Δρmin = −0.20 e Å−3

  • Absolute structure: Flack (1983[Flack, H. D. (1983). Acta Cryst. A39, 876-881.]), 952 Friedel pairs

  • Flack parameter: 0.04 (5)

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
C7—H71⋯O2i 0.880 (18) 2.366 (18) 3.2443 (16) 175.6 (16)
Symmetry code: (i) [-x+{\script{3\over 2}}, -y+1, z+{\script{1\over 2}}].

Data collection: APEX2 (Bruker, 2007[Bruker (2007). APEX2 and SAINT-Plus. Bruker AXS, Inc., Madison, Wisconsin, USA.]); cell refinement: SAINT-Plus (Bruker, 2007[Bruker (2007). APEX2 and SAINT-Plus. Bruker AXS, Inc., Madison, Wisconsin, USA.]); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supporting information


Comment top

The title compound was prepared as an intermediate in the search for potential triple neurotransmittor reuptake inhibitors (Milewska et al., 1996; Lin & Charette, 2005; Tsuji et al., 1999; Džolić et al., 2003); details will be published elsewhere.

The molecular structure is shown in Fig. 1. The five-membered ring of the molecule is best described as a flat envelope conformation with C1 located 0.208 (2) Å below the plane constituted by C2, C4, C5 and O1, on the opposite side of C3. In the crystal structure the weak C—H···O hydrogen bonding presents between benzene ring and the carbonyl O atom of the neighboring molecule (Table 1).

Related literature top

The title compound was prepared as an intermediate in the search for potential triple neurotransmittor reuptake inhibitors, see: Milewska et al. (1996); Lin & Charette (2005); Tsuji et al. (1999); Džolić et al. (2003).

Experimental top

Block-shaped single crystals were obtained from an acetonitrile solution by slow evaporation at room temperature.

Refinement top

Positional parameters were refined for all H atoms, Uiso(H) values were set to 1.2Ueq(C).

Computing details top

Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT-Plus (Bruker, 2007); data reduction: SAINT-Plus (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound. Displacement ellipsoids are shown at the 50% probability level and H atoms are shown as spheres of arbitrary size.
(1S,5R)-1-(3,4-dichlorophenyl)-3-oxabicyclo[3.1.0]hexan-2-one top
Crystal data top
C11H8Cl2O2Dx = 1.620 Mg m3
Mr = 243.07Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 6286 reflections
a = 7.0597 (4) Åθ = 2.4–27.9°
b = 11.1343 (7) ŵ = 0.62 mm1
c = 12.6756 (8) ÅT = 102 K
V = 996.36 (11) Å3Block, colourless
Z = 40.58 × 0.36 × 0.18 mm
F(000) = 496
Data collection top
Bruker APEXII CCD
diffractometer
2341 independent reflections
Radiation source: fine-focus sealed tube2278 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.018
Detector resolution: 8.3 pixels mm-1θmax = 27.9°, θmin = 2.4°
Sets of exposures each taken over 0.5° ω rotation scansh = 98
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
k = 1414
Tmin = 0.680, Tmax = 0.894l = 1616
8562 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.024Only H-atom coordinates refined
wR(F2) = 0.063 w = 1/[σ2(Fo2) + (0.0387P)2 + 0.112P]
where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
2341 reflectionsΔρmax = 0.43 e Å3
160 parametersΔρmin = 0.20 e Å3
0 restraintsAbsolute structure: Flack (1983), 952 Friedel pairs
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.04 (5)
Crystal data top
C11H8Cl2O2V = 996.36 (11) Å3
Mr = 243.07Z = 4
Orthorhombic, P212121Mo Kα radiation
a = 7.0597 (4) ŵ = 0.62 mm1
b = 11.1343 (7) ÅT = 102 K
c = 12.6756 (8) Å0.58 × 0.36 × 0.18 mm
Data collection top
Bruker APEXII CCD
diffractometer
2341 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
2278 reflections with I > 2σ(I)
Tmin = 0.680, Tmax = 0.894Rint = 0.018
8562 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.024Only H-atom coordinates refined
wR(F2) = 0.063Δρmax = 0.43 e Å3
S = 1.10Δρmin = 0.20 e Å3
2341 reflectionsAbsolute structure: Flack (1983), 952 Friedel pairs
160 parametersAbsolute structure parameter: 0.04 (5)
0 restraints
Special details top

Experimental. Crystallized from acetonitrile solution

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Data were collected by measuring three sets of exposures with the detector set at 2θ = 29°, crystal-to-detector distance 6.00 cm. Refinement of F2 against ALL reflections.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cl10.76710 (6)1.02347 (3)0.53880 (3)0.02383 (10)
Cl20.76768 (6)0.86335 (3)0.33094 (3)0.02003 (10)
O10.89020 (18)0.30003 (10)0.51020 (9)0.0219 (2)
O20.7597 (2)0.41878 (9)0.38886 (8)0.0258 (3)
C10.9599 (2)0.30985 (14)0.61831 (12)0.0195 (3)
H111.095 (3)0.3243 (17)0.6145 (14)0.023*
H120.928 (3)0.2377 (17)0.6515 (15)0.023*
C20.8628 (2)0.41790 (14)0.66439 (13)0.0162 (3)
H210.921 (2)0.4618 (19)0.7169 (15)0.019*
C30.6531 (2)0.41869 (15)0.65659 (14)0.0183 (3)
H310.586 (3)0.469 (2)0.6993 (15)0.022*
H320.590 (3)0.3471 (17)0.6365 (14)0.022*
C40.7718 (2)0.48380 (12)0.57217 (10)0.0153 (3)
C50.8034 (2)0.40360 (13)0.47933 (12)0.0191 (3)
C60.7654 (2)0.61725 (12)0.56086 (11)0.0154 (3)
C70.7598 (2)0.68907 (12)0.65134 (10)0.0174 (3)
H710.756 (3)0.6558 (15)0.7143 (14)0.021*
C80.7586 (2)0.81285 (12)0.64365 (11)0.0183 (3)
H810.746 (3)0.8709 (14)0.7047 (13)0.022*
C90.7631 (2)0.86805 (11)0.54561 (11)0.0167 (3)
C100.7664 (2)0.79786 (12)0.45517 (10)0.0155 (3)
C110.7674 (2)0.67269 (12)0.46254 (11)0.0156 (3)
H1110.776 (3)0.6262 (14)0.4035 (14)0.019*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cl10.0310 (2)0.01352 (15)0.02696 (19)0.00112 (17)0.00448 (17)0.00012 (12)
Cl20.02456 (18)0.01897 (16)0.01656 (16)0.00227 (16)0.00294 (15)0.00519 (12)
O10.0341 (6)0.0156 (5)0.0160 (5)0.0008 (5)0.0016 (5)0.0023 (4)
O20.0423 (7)0.0211 (5)0.0141 (5)0.0054 (6)0.0031 (6)0.0004 (4)
C10.0258 (8)0.0161 (7)0.0165 (7)0.0021 (6)0.0009 (6)0.0023 (6)
C20.0203 (7)0.0157 (7)0.0126 (7)0.0001 (6)0.0008 (6)0.0010 (6)
C30.0216 (7)0.0158 (7)0.0175 (8)0.0008 (6)0.0022 (6)0.0030 (6)
C40.0186 (7)0.0153 (6)0.0120 (6)0.0015 (6)0.0015 (5)0.0013 (5)
C50.0255 (8)0.0142 (6)0.0176 (7)0.0050 (6)0.0003 (6)0.0004 (5)
C60.0142 (6)0.0156 (6)0.0165 (6)0.0012 (6)0.0012 (6)0.0015 (5)
C70.0194 (7)0.0192 (6)0.0137 (6)0.0003 (7)0.0009 (6)0.0018 (5)
C80.0179 (7)0.0194 (6)0.0176 (6)0.0010 (7)0.0016 (6)0.0029 (5)
C90.0157 (6)0.0129 (6)0.0215 (7)0.0006 (6)0.0034 (6)0.0003 (5)
C100.0140 (7)0.0171 (6)0.0153 (6)0.0010 (6)0.0019 (6)0.0045 (5)
C110.0154 (7)0.0168 (6)0.0144 (6)0.0012 (6)0.0010 (6)0.0003 (5)
Geometric parameters (Å, º) top
Cl1—C91.7329 (13)C3—H320.949 (19)
Cl2—C101.7353 (13)C4—C61.4934 (18)
O1—C51.3631 (19)C4—C51.4940 (19)
O1—C11.4602 (19)C6—C111.3909 (18)
O2—C51.1996 (18)C6—C71.3988 (19)
C1—C21.503 (2)C7—C81.3817 (19)
C1—H110.97 (2)C7—H710.880 (17)
C1—H120.93 (2)C8—C91.3868 (19)
C2—C31.484 (2)C8—H811.012 (17)
C2—C41.522 (2)C9—C101.3877 (19)
C2—H210.92 (2)C10—C111.3968 (19)
C3—C41.541 (2)C11—H1110.912 (17)
C3—H310.91 (2)
C5—O1—C1110.94 (12)C5—C4—C3110.31 (12)
O1—C1—C2105.73 (13)C2—C4—C357.96 (9)
O1—C1—H11107.3 (11)O2—C5—O1120.62 (14)
C2—C1—H11109.6 (12)O2—C5—C4129.07 (14)
O1—C1—H12106.0 (12)O1—C5—C4110.28 (13)
C2—C1—H12113.7 (11)C11—C6—C7118.77 (12)
H11—C1—H12113.8 (16)C11—C6—C4121.82 (12)
C3—C2—C1115.72 (15)C7—C6—C4119.40 (12)
C3—C2—C461.65 (11)C8—C7—C6120.84 (13)
C1—C2—C4106.25 (13)C8—C7—H71118.9 (11)
C3—C2—H21119.1 (11)C6—C7—H71120.3 (11)
C1—C2—H21120.2 (12)C7—C8—C9120.34 (12)
C4—C2—H21119.1 (13)C7—C8—H81125.7 (9)
C2—C3—C460.40 (11)C9—C8—H81113.8 (9)
C2—C3—H31118.9 (12)C8—C9—C10119.42 (12)
C4—C3—H31113.9 (13)C8—C9—Cl1119.18 (10)
C2—C3—H32118.9 (11)C10—C9—Cl1121.40 (10)
C4—C3—H32117.8 (11)C9—C10—C11120.45 (12)
H31—C3—H32115.4 (18)C9—C10—Cl2120.87 (10)
C6—C4—C5121.57 (12)C11—C10—Cl2118.68 (10)
C6—C4—C2124.48 (12)C6—C11—C10120.18 (13)
C5—C4—C2104.70 (11)C6—C11—H111118.9 (10)
C6—C4—C3121.22 (12)C10—C11—H111120.8 (10)
C1—C2—C4—C55.85 (15)C3—C4—C5—O157.45 (16)
O1—C1—C2—C412.38 (16)C2—C4—C6—C11148.81 (15)
C2—C4—C5—O13.36 (16)C3—C4—C6—C11140.85 (15)
C5—C4—C6—C117.2 (2)C5—C4—C6—C7171.84 (15)
C5—O1—C1—C215.19 (17)C2—C4—C6—C730.3 (2)
O1—C1—C2—C353.50 (19)C3—C4—C6—C740.1 (2)
C1—C2—C3—C495.34 (15)C11—C6—C7—C80.7 (3)
C3—C2—C4—C6108.17 (17)C4—C6—C7—C8178.38 (15)
C1—C2—C4—C6140.96 (15)C6—C7—C8—C90.1 (3)
C3—C2—C4—C5105.02 (14)C7—C8—C9—C100.8 (3)
C1—C2—C4—C55.85 (15)C7—C8—C9—Cl1178.46 (14)
C1—C2—C4—C3110.87 (16)C8—C9—C10—C110.7 (2)
C2—C3—C4—C6113.68 (15)Cl1—C9—C10—C11178.55 (12)
C2—C3—C4—C595.02 (14)C8—C9—C10—Cl2178.79 (13)
C1—O1—C5—O2169.94 (16)Cl1—C9—C10—Cl21.94 (19)
C1—O1—C5—C411.76 (17)C7—C6—C11—C100.8 (2)
C6—C4—C5—O230.5 (3)C4—C6—C11—C10178.25 (14)
C2—C4—C5—O2178.54 (17)C9—C10—C11—C60.1 (2)
C3—C4—C5—O2120.66 (19)Cl2—C10—C11—C6179.64 (12)
C6—C4—C5—O1151.37 (14)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C7—H71···O2i0.880 (18)2.366 (18)3.2443 (16)175.6 (16)
Symmetry code: (i) x+3/2, y+1, z+1/2.

Experimental details

Crystal data
Chemical formulaC11H8Cl2O2
Mr243.07
Crystal system, space groupOrthorhombic, P212121
Temperature (K)102
a, b, c (Å)7.0597 (4), 11.1343 (7), 12.6756 (8)
V3)996.36 (11)
Z4
Radiation typeMo Kα
µ (mm1)0.62
Crystal size (mm)0.58 × 0.36 × 0.18
Data collection
DiffractometerBruker APEXII CCD
diffractometer
Absorption correctionMulti-scan
(SADABS; Sheldrick, 1996)
Tmin, Tmax0.680, 0.894
No. of measured, independent and
observed [I > 2σ(I)] reflections
8562, 2341, 2278
Rint0.018
(sin θ/λ)max1)0.658
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.024, 0.063, 1.10
No. of reflections2341
No. of parameters160
H-atom treatmentOnly H-atom coordinates refined
Δρmax, Δρmin (e Å3)0.43, 0.20
Absolute structureFlack (1983), 952 Friedel pairs
Absolute structure parameter0.04 (5)

Computer programs: APEX2 (Bruker, 2007), SAINT-Plus (Bruker, 2007), SHELXTL (Sheldrick, 2008).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C7—H71···O2i0.880 (18)2.366 (18)3.2443 (16)175.6 (16)
Symmetry code: (i) x+3/2, y+1, z+1/2.
 

References

First citationBruker (2007). APEX2 and SAINT-Plus. Bruker AXS, Inc., Madison, Wisconsin, USA.
First citationDžolić, Z., Krištafor, V., Cetina, M., Nagl, A., Hergold-Brundić, A., Mrvoš-Sermek, D., Burgemeister, T., Grdiša, M., Slade, N., Pavelic, K., Balzarini, J., De Clercq, E. & Mintas, M. (2003). Nucleosides Nucleotides Nucleic Acids, 22, 373–389.  Web of Science PubMed
First citationFlack, H. D. (1983). Acta Cryst. A39, 876–881.  CrossRef CAS Web of Science IUCr Journals
First citationLin, W. & Charette, A. B. (2005). Adv. Synth. Catal. 347, 1547–1552.  Web of Science CSD CrossRef CAS
First citationMilewska, M. J., Gdaniec, M. & Poloński, T. (1996). Tetrahedron Asymmetry, 7, 3169–3180.  CSD CrossRef CAS Web of Science
First citationSheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals
First citationTsuji, T., Onishi, T. & Sakata, K. (1999). Tetrahedron Asymmetry, 10, 3819–3825.  Web of Science CSD CrossRef CAS

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ISSN: 2056-9890
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