organic compounds
2-[(Methoxycarbonothioyl)sulfanyl]acetic acid
aDept. of Chemical and Biochemical Engineering, Faculty of Engineering, The University of Western Ontario, London, Ontario, Canada N6A 5B9
*Correspondence e-mail: pcharpentier@eng.uwo.ca
The title compound, C4H6O3S2, features a characteristic xanthate group; the C=S double bond is shorter than the C—S single bond, and the methyl group is coplanar with the xanthate group. In the crystal pairs of molecules form dimers through intermolecular O—H⋯O hydrogen bonding.
Related literature
For a related structure, see: Xiao & Charpentier (2010). For the design and applications of the title compound, see: Moad et al. (2005, 2008); Stenzel et al. (2003); Coote & Radom (2004); Coote et al. (2006).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811003941/ng5085sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811003941/ng5085Isup2.hkl
Potassium hydroxide 5.6 g (50 mmol) was dissolved in methanol 30 ml at room temperature. The solution was cooled with an ice bath when carbon disulfide 20 ml was charged into the flask dropwise. After 1 day reaction at room temperature, a solution of 2-bromoacetic acid 6.9 g (50 mmol) / methanol 20 ml was added into the flask dropwise in an ice bath. The precipitates were removed by filtration after 2 days reaction at room temperature, and the solvent was evaporated with a rotary evaporator. The crude product was run through a silica gel column with a mixture of ethyl ether / hexanes (5:1). Colorless crystals were obtained from crystalization in hexanes/ cyclohexane (4:1). m.p.: 112.6 °C (DSC). MS: 165.9764.
The structure was solved and refined using the Bruker SHELXTL Software Package, using the
P 1 21/c 1, with Z = 4 for the formula unit, C4H6O3S2. All of the non-hydrogen atoms were refined with anisotropic thermal parameters. The hydrogen atom positions were calculated geometrically and were included as riding on their respective carbon/oxygen atoms. The final anisotropic full-matrix least-squares on F2 with 84 variables converged at R1 = 2.13%, for the observed data and wR2 = 5.55% for all data. The goodness-of-fit was 1.047. The largest peak in the final difference electron density synthesis was 0.288 e-/Å3 and the largest hole was -0.195 e-/Å3 with an RMS deviation of 0.040 e-/Å3. On the basis of the final model, the calculated density was 1.589 g/cm3 and 344 e-.Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. View of the title compound (50% probability displacement ellipsoids). | |
Fig. 2. Packing diagram of the structure with H-bonds. |
C4H6O3S2 | F(000) = 344 |
Mr = 166.21 | Dx = 1.589 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9941 reflections |
a = 7.1009 (3) Å | θ = 2.9–30.2° |
b = 10.6485 (5) Å | µ = 0.70 mm−1 |
c = 9.2022 (4) Å | T = 150 K |
β = 93.370 (1)° | Block, colourless |
V = 694.61 (5) Å3 | 0.10 × 0.07 × 0.06 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 1723 independent reflections |
Radiation source: fine-focus sealed tube | 1517 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.038 |
ϕ and ω scans | θmax = 28.3°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.931, Tmax = 0.963 | k = −14→13 |
33976 measured reflections | l = −12→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.021 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.056 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0234P)2 + 0.2541P] where P = (Fo2 + 2Fc2)/3 |
1723 reflections | (Δ/σ)max = 0.001 |
84 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C4H6O3S2 | V = 694.61 (5) Å3 |
Mr = 166.21 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.1009 (3) Å | µ = 0.70 mm−1 |
b = 10.6485 (5) Å | T = 150 K |
c = 9.2022 (4) Å | 0.10 × 0.07 × 0.06 mm |
β = 93.370 (1)° |
Bruker APEXII CCD diffractometer | 1723 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1517 reflections with I > 2σ(I) |
Tmin = 0.931, Tmax = 0.963 | Rint = 0.038 |
33976 measured reflections |
R[F2 > 2σ(F2)] = 0.021 | 0 restraints |
wR(F2) = 0.056 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.29 e Å−3 |
1723 reflections | Δρmin = −0.20 e Å−3 |
84 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.15918 (5) | 0.31498 (3) | 0.78725 (4) | 0.02980 (9) | |
S2 | −0.11784 (5) | 0.12843 (3) | 0.90015 (4) | 0.03122 (9) | |
O1 | −0.10815 (13) | 0.37609 (8) | 0.93394 (10) | 0.0311 (2) | |
O2 | 0.41851 (14) | −0.01297 (9) | 0.81022 (10) | 0.0319 (2) | |
H2 | 0.4754 | −0.0511 | 0.8797 | 0.048* | |
O3 | 0.38409 (12) | 0.13435 (8) | 0.98001 (9) | 0.02570 (19) | |
C1 | −0.2814 (2) | 0.36782 (14) | 1.00825 (15) | 0.0354 (3) | |
H1A | −0.3839 | 0.3404 | 0.9395 | 0.053* | |
H1B | −0.3120 | 0.4504 | 1.0476 | 0.053* | |
H1C | −0.2659 | 0.3070 | 1.0880 | 0.053* | |
C2 | −0.03785 (16) | 0.27021 (11) | 0.88181 (13) | 0.0233 (2) | |
C3 | 0.25018 (18) | 0.16615 (12) | 0.73538 (13) | 0.0279 (3) | |
H3A | 0.1438 | 0.1134 | 0.6969 | 0.034* | |
H3B | 0.3354 | 0.1794 | 0.6554 | 0.034* | |
C4 | 0.35645 (16) | 0.09552 (11) | 0.85644 (13) | 0.0224 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.03072 (17) | 0.02100 (15) | 0.03800 (18) | 0.00050 (12) | 0.00457 (13) | 0.00871 (12) |
S2 | 0.03306 (17) | 0.02151 (16) | 0.03927 (19) | −0.00432 (12) | 0.00377 (13) | 0.00243 (12) |
O1 | 0.0293 (5) | 0.0230 (4) | 0.0407 (5) | 0.0011 (3) | 0.0005 (4) | −0.0062 (4) |
O2 | 0.0404 (5) | 0.0291 (5) | 0.0252 (4) | 0.0120 (4) | −0.0050 (4) | −0.0049 (4) |
O3 | 0.0264 (4) | 0.0255 (4) | 0.0248 (4) | 0.0046 (3) | −0.0011 (3) | −0.0034 (3) |
C1 | 0.0337 (7) | 0.0385 (7) | 0.0339 (7) | 0.0061 (6) | 0.0026 (6) | −0.0058 (6) |
C2 | 0.0245 (6) | 0.0223 (6) | 0.0224 (5) | 0.0007 (4) | −0.0060 (4) | 0.0009 (4) |
C3 | 0.0317 (6) | 0.0281 (6) | 0.0242 (6) | 0.0041 (5) | 0.0040 (5) | 0.0041 (5) |
C4 | 0.0195 (5) | 0.0226 (5) | 0.0254 (6) | −0.0001 (4) | 0.0040 (4) | 0.0005 (4) |
S1—C2 | 1.7564 (13) | O3—C4 | 1.2150 (14) |
S1—C3 | 1.7870 (13) | C1—H1A | 0.9800 |
S2—C2 | 1.6253 (12) | C1—H1B | 0.9800 |
O1—C2 | 1.3336 (15) | C1—H1C | 0.9800 |
O1—C1 | 1.4451 (17) | C3—C4 | 1.5091 (16) |
O2—C4 | 1.3159 (14) | C3—H3A | 0.9900 |
O2—H2 | 0.8400 | C3—H3B | 0.9900 |
C2—S1—C3 | 101.69 (6) | S2—C2—S1 | 126.65 (7) |
C2—O1—C1 | 117.76 (10) | C4—C3—S1 | 114.70 (9) |
C4—O2—H2 | 109.5 | C4—C3—H3A | 108.6 |
O1—C1—H1A | 109.5 | S1—C3—H3A | 108.6 |
O1—C1—H1B | 109.5 | C4—C3—H3B | 108.6 |
H1A—C1—H1B | 109.5 | S1—C3—H3B | 108.6 |
O1—C1—H1C | 109.5 | H3A—C3—H3B | 107.6 |
H1A—C1—H1C | 109.5 | O3—C4—O2 | 124.23 (11) |
H1B—C1—H1C | 109.5 | O3—C4—C3 | 124.58 (11) |
O1—C2—S2 | 127.40 (10) | O2—C4—C3 | 111.18 (10) |
O1—C2—S1 | 105.94 (8) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3i | 0.84 | 1.82 | 2.6540 (12) | 175 |
Symmetry code: (i) −x+1, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C4H6O3S2 |
Mr | 166.21 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 150 |
a, b, c (Å) | 7.1009 (3), 10.6485 (5), 9.2022 (4) |
β (°) | 93.370 (1) |
V (Å3) | 694.61 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.70 |
Crystal size (mm) | 0.10 × 0.07 × 0.06 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.931, 0.963 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 33976, 1723, 1517 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.021, 0.056, 1.05 |
No. of reflections | 1723 |
No. of parameters | 84 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.20 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3i | 0.84 | 1.82 | 2.6540 (12) | 175 |
Symmetry code: (i) −x+1, −y, −z+2. |
Acknowledgements
This work was supported by the Canadian Natural Sciences and Engineering Research Council (NSERC) Idea to Innovation (I2I) Program. The authors are grateful to Dr Guerman Popov of the Department of Chemistry, the University of Western Ontario, for the XRD data acquisition and interpretation.
References
Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Coote, M. L., Izgorodina, E. I., Cavigliasso, G. E., Roth, M., Busch, M. & Barner-Kowollik, C. (2006). Macromolecules, 39, 4585–4591. Web of Science CrossRef CAS Google Scholar
Coote, M. L. & Radom, L. (2004). Macromolecules, 37, 590–596. Web of Science CrossRef CAS Google Scholar
Moad, G., Rizzardo, E. & Thang, S. H. (2005). Aust. J. Chem. 58, 379–410. Web of Science CrossRef CAS Google Scholar
Moad, G., Rizzardo, E. & Thang, S. H. (2008). Polymer, 49, 1079–1131. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Stenzel, M. H., Cummins, L., Roberts, G. E., Davis, T. P., Vana, P. & Barner-Kowollik, C. (2003). Macromol. Chem. Phys. 204, 1160–1168. Web of Science CrossRef CAS Google Scholar
Xiao, S. & Charpentier, P. A. (2010). Acta Cryst. E66, o3103. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Carbonothioylthio (S=C—S) compounds are used as chain transfer agents (CTA) in addition-fragmentation chain-transfer (RAFT) polymerization. In the addition-fragmentation equilibria, addition of the propagating radicals to the S=C group followed by fragmentation of the intermediate radical at the C—S bond generates a new radical and a polymeric carbonothioylthio compound (Moad et al., 2005, 2008). O-alkyl xanthates show low reactivity in RAFT equilibria due to the conjugation of the O lone pair electrons and the C=S bond which is favorable to the zwitterionic canonical forms of xanthates (Moad et al., 2005; Coote et al., 2006). However, xanthates can promote fragmentation of unstable radicals, such as vinyl acetate radicals that undergo fast addition and slow fragmentation (Coote et al., 2006). Though studies have been done on RAFT polymerization of vinyl acetate with methyl 2-(methoxycarbonothioylthio)acetate (Stenzel et al., 2003; Coote & Radom, 2004), 2-(methoxycarbonothioylthio)acetic acid has not been used in RAFT polymerization. Therefore, efforts were made to use 2-(methoxycarbonothioylthio)acetic acid as the CTA in RAFT polymerization, and poly(vinyl acetate)s containing carboxylic acid end groups were successfully prepared. A similar compound, 2-(isopropoxycarbonothioylthio)acetic acid, has been reported for the same application (Xiao & Charpentier, 2010).