Jmol – a paradigm shift in crystallographic visualization
[Figure 15]
[Figure 15]

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Figure 15
A portion of a DNA–protein complex (PDB code 1d66 ; Marmorstein et al., 1992BB25) with the DNA van der Waals surface colored by relative orientation of bases. The sharp coloration change in the center right indicates a region of unusually low straightness (load =1d66; set quaternionFrame "C"; isosurface select(DNA) ignore(not DNA) vdw map property straightness).










The script commands and data file used by Jmol are available from Crystallography Journals Online as supplementary material for this article.

Figure 15
A portion of a DNA–protein complex (PDB code 1d66 ; Marmorstein et al., 1992BB25) with the DNA van der Waals surface colored by relative orientation of bases. The sharp coloration change in the center right indicates a region of unusually low straightness (load =1d66; set quaternionFrame "C"; isosurface select(DNA) ignore(not DNA) vdw map property straightness).

Journal logo JOURNAL OF
APPLIED
CRYSTALLOGRAPHY
ISSN: 1600-5767
Volume 43| Part 5| September 2010| Pages 1250-1260
doi:10.1107/S0021889810030256
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