- 1. Introduction
- 2. Synthesis and crystallization
- 3. Database survey
- 4. X-ray refinement
- 5. Features of the FAP and TAP crystal structures
- 6. DFT calculations on molecules in isolation
- 7. Comparison of conformers observed in the crystal state and conformers calculated with DFT for molecules in isolation
- 8. Why is FAP an ordered structure while TAP is disordered?
- 9. Hirshfeld surfaces and close contacts
- 10. Molecular interaction energy (MIE) analysis in FAP and TAP
- 11. Summary
- Supporting information
- References
- 1. Introduction
- 2. Synthesis and crystallization
- 3. Database survey
- 4. X-ray refinement
- 5. Features of the FAP and TAP crystal structures
- 6. DFT calculations on molecules in isolation
- 7. Comparison of conformers observed in the crystal state and conformers calculated with DFT for molecules in isolation
- 8. Why is FAP an ordered structure while TAP is disordered?
- 9. Hirshfeld surfaces and close contacts
- 10. Molecular interaction energy (MIE) analysis in FAP and TAP
- 11. Summary
- Supporting information
- References
research papers
An energetic study of differences in crystallization of N-(furan-3-yl)benzamide and N-(thiophen-3-yl)benzamide
aChemistry Department, United States Naval Academy, 572 Holloway Rd, Annapolis, MD 21402, USA
*Correspondence e-mail: [email protected]
The crystal structures of N-(furan-3-yl)benzamide, C11H9NOS, FAP, and N-(thiophen-3-yl)benzamide, C11H9NO2, TAP, were determined by single-crystal X-ray diffraction at 173 K. The molecular units in both structures consist of three planar regions: a five-membered aryl ring, an amide linkage, and a phenyl ring. Both compounds crystallize in the space group P1 with no solvent in the There are two crystallographically unique, but geometrically similar, molecules in the of FAP. N—H⋯O hydrogen bonds in FAP link the molecules into a linear chain lying along the b axis. The in TAP is a disordered molecule containing contributions from two conformers with different orientations of the thiophenyl ring. N—H⋯O hydrogen bonds in TAP link the molecules into a linear chain lying along the a axis. Conformations of the gas-phase isolated conformers were predicted with density functional theory (DFT) calculations at the M06-2X/6-31+G(d) level. The conformers in FAP possess similar twist angles with respect to their calculated isolated conformers. However, the DFT calculations revealed a significant difference (>20°) in the twist angles of the thiophenyl rings–amide plane in TAP relative to the predicted gas-phase conformations. The π-stacking ring interactions between hydrogen-bonded molecules in the two crystal structures are not the same and are related to the difference in the magnitude of the dispersion and electrostatic interactions in the FAP and TAP environments.
1. Introduction
A series of arylamides was synthesized and isolated during the development of a microwave-assisted copper-catalyzed concurrent tandem catalytic methodology for the amidation of aryl chlorides and aryl bromides. Crystal structures for two of these arylamides have been published previously (Pearson et al., 2022
). The current work is a continuation of our investigation of the conformations of arylamides in the crystalline state versus the conformations of the isolated molecules as predicted by density functional theory (DFT) calculations. Analysis of the molecular interaction energies in the crystalline environments was performed to explain differences in the crystal packing. Our approach of comparing the conformational preferences of molecules in isolation to the observed conformations in the crystal state for these small molecules has the potential to yield insights about crystal packing in larger amide-containing systems of relevance in biological or materials chemistry.
2. Synthesis and crystallization
Details of the syntheses of the title compounds TAP and FAP (Scheme 1
) can be found in Chang et al. (2019
) for N-(furan-3-yl)benzamide and in Wood et al. (2022
) for N-(thiophen-3-yl)benzamide. Crystals for the compounds were grown by slow diffusion of hexanes into concentrated solutions of the amides in ethyl acetate. Melting points were determined to be 146–148 °C for FAP and 153–154 °C for TAP. Literature values of 145–147.3 °C for FAP and 154–155 °C for TAP were reported in Yasuhisa et al. (2017
).
3. Database survey
The Cambridge Structural Database (CSD, Version of April 2025, updated February 2025; Groom et al., 2016
) was searched for possible crystal structures of these compounds. No entries were found.
4. X-ray refinement
Ellipsoidal plots of the molecules in the asymmetric units of FAP and TAP are shown in Figs. 1
(FXA and FXB) and 2
(TXA and TXB).
| Figure 1 Displacement ellipsoid plots (50% probability level) of the two independent molecules in the asymmetric unit in FAP, showing (a) FXA and (b) FXB. |
| Figure 2 Displacement ellipsoid plots (50% probability level) of the two conformers in the disordered asymmetric unit in TAP, showing (a) TXA and (b) TXB. |
for FAP resulted in R1 = 0.058 for all data. Initial refinements for TAP converged to R1 = 0.118, with indications of a disordered thiophenyl ring in the asymmetric unit. The disorder is the result of two different conformers occupying the molecular sites, with orientations of the thiophenyl rings differing by ∼180° (179.87°). A similar type of disorder was found in the crystal structure of N′-[(E)-pyridin-2-ylmethylidene]-2-(thiophen-2-yl)ethanohydrazide (Garbutt et al., 2022
). For TAP, conformers TXA [Fig. 2
(a)] and TXB [Fig. 2
(b)] are components of the disordered asymmetric unit. It was decided to use the simplest possible model involving split atoms for C10 and S1. Incorporation of disorder into the TAP model resulted in R1 = 0.044 for all data. Occupancies of the two conformers refined to 0.702 (2) for TXA and 0.298 (2) for TXB. The nature of the disorder and the small amount of electron density associated with the C atoms of conformer B required employing distance restraints and atomic displacement parameter constraints to the disordered atoms. Please see the supporting information for full details.
Difference density maps revealed the presence of H-atom electron densities that could be modeled using unrestrained C—H bond lengths and isotropic displacement parameters. Unrestrained N—H distances refined to very short bonds of approximately 0.85 Å. As a result, the N—H bond lengths in the hydrogen-bonded interactions were refined with a distance restraint of 1.00 Å. This restraint is consistent with the results of the DFT and Molecular energy interaction (MEI) calculations. The H atom associated with the minor component of disorder in TAP (H10B) could not be treated with a direct refinement and was modeled using a riding model. Details of the refinement choices can be found in the supporting information.
Crystal data, data collection and structure refinement details are summarized in Table 1
.
|
5. Features of the FAP and TAP crystal structures
The unit cells for FAP and TAP are shown in Fig. 3
. Hydrogen bonding is present between molecules in both crystals forming linear chains along the b axis in FAP and along the a axis in TAP. The hydrogen-bond geometries are listed in Tables 2
and 3
.
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| Figure 3 The unit cells of (a) FAP and (b) TAP. Hydrogen bonds are shown as black lines. |
An important aspect of the geometries of the conformers in each is the relationship between the chalcogen atoms (O and S) in the amide plane and the five-membered ring. Syn conformers have the chalcogen atoms on the same side of the molecule, while anti conformers have the chalcogen atoms on opposite sides of the molecule. The in FAP [Fig. 3
(a)] contains only syn conformers (FXA and FXB) and inverted forms. Fig. 3
(b) represents the disordered structure of TAP. The disorder in TAP is a result of the ability of both syn and anti conformers (TXA and TXB) to occupy the same crystallographic site in different unit cells.
The bond lengths and angles in these four conformers are typical of those in small organic molecules. Experimental bond lengths and angles are contained in the supporting information.
Twist angles between the the aryl regions of the conformers show similarities and variations in FAP and TAP. Phenyl–amide twist angles range from 26.0 (2) to 30.3 (1)° in both compounds. FAP conformers FXA and FXB exhibit relatively minor twist angles of 1.6 (2)–6.8 (2)° between the amide plane and the furanyl ring. TAP conformers TXA and TXB have fairly large twist angles of 31.1 (1) and 31.0 (2)° between the amide plane and the thiophenyl ring.
6. DFT calculations on molecules in isolation
Quantum-chemical DFT calculations were performed to find the conformations of global minimum energy for the conformers of the two compounds in isolation. Calculations were performed with the GAUSSIAN16 (Frisch et al., 2016
) program suite on Department of Defense High Performance Modernization resources. Initial conformer searching was performed at the molecular mechanics level with the MMFF force field as implemented in Spartan'14 molecular modeling software (Wavefunction Inc., 2014
). Viable structures were then subjected to complete geometry optimizations in GAUSSIAN16 at the M06-2X/6-31+G(d) level (Zhao & Truhlar, 2008
). Frequency calculations were performed at M06-2X/6-31+G(d) to confirm that all stationary points were minima. Calculations of Gibbs free energies at 298.15 K were performed using standard routines in GAUSSIAN16.
7. Comparison of conformers observed in the crystal state and conformers calculated with DFT for molecules in isolation
Comparison of the experimental and DFT-calculated conformers for FAP and TAP are shown in Fig. 4
. The experimental conformers in FAP and TAP are labeled as FXA, FXB, TXA, and TXB. The corresponding isolated molecules, as determined by M06-2X/6-31+G(d) optimization, are labeled FDA, FDB, TDA, and TDB.
| Figure 4 Experimental and DFT conformers in FAP and TAP. The angles between planar regions are given in degrees (°). |
FDA and FDB are isoergic conformers. Conformer FDANTI has no analog in FAP but corresponds to the minimum energy for possible anti conformers of the isolated furanyl compound. FDA and FDB are 7.66 kJ mol−1 lower in internal energy than conformer FDANTI. The FDA and FDB isomers have calculated Gibbs free energies that are 5.94 kJ mol−1 lower than FDANTI. Mole fractions, based upon this free energy difference, would be 0.90 for the syn conformers versus 0.10 for the anti conformer. TDA is the result of M06-2X/6-31+G(d) energy minimization of the syn conformer TXA. TDB is the result of M06-2X/6-31+G(d) energy minimization of the anti conformer TXB. TDA has an internal energy 4.98 kJ mol−1 lower than TDB. After conversion to free energy, TDA is found to be 3.43 kJ mol−1 lower in Gibbs free energy than TDB. This ΔG value corresponds to mole fractions of 0.80 for TDA and 0.20 for TDB, similar to the refined occupancies for TXA (0.70) and TXB (0.30).
Twist angles between the planar regions in the conformers are listed in Table 4
and shown in Fig. 4
. A major difference between the conformers in FAP and TAP involves the twist angles between the five-membered aromatic rings and the amide plane. The experimental furanyl–amide plane twist angles in the FXA and FXB conformers differ from the corresponding angles in FDA and FDB by no more than 5°. The thiophenyl–amide plane angles in TXA and TXB are in excess of 20° greater than the corresponding angles in TDA and TDB. These twist angles will be discussed further in Section 10
.
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The decision for modeling the H-atom positions without using a riding model was guided, in part, by examination of the M06-2X/6-31+G(d) results. The results for FDA, FDB, TDA, and TDB (shown in the supporting information) predict that the C—H bonds do not bisect the interior ring angles of the five-membered rings. Using a riding model in the refinements of FAP and TAP would force the corresponding H atoms in FXA, FXB, TXA, and TXB to bisect the interior ring angles of the five-membered rings. A literature search of recent crystal structures containing furanyl and thiophenyl rings resulted in one report (Majer et al., 2020
) of refined H-atom positions in a furanyl ring. In that study, the C—H bonds do not bisect the interior ring angles. Comparisons of the refined C—H terminal angles in the furanyl rings of FXA and FXB with those in FDA and FDB and the Majer study are shown in Fig. 5
. The results indicate that the experimental H-atom positions in FAP and TAP should be refined and not fixed with a riding model.
| Figure 5 C—H terminal angles (in °) for the furanyl ring in (a) FXA, (b) FXB, (c) FDA, (d) FDB, and (e) Majer et al. (2020 |
Direct of H-atom positions results in some differences in the terminal phenyl ring angles when compared to the M06-2X/6-31+G(d) results. Further discussion of this finding can be found in Section 9
. A full comparison of bond lengths and angles in the X-ray models and M06-2X/6-31+G(d) calculations can be found in the supporting information.
8. Why is FAP an ordered structure while TAP is disordered?
The reason for an ordered structure in FAP versus a disordered structure in TAP appears to involve the nature of the conformers that are present in the unit cells. The results of the syn/anti population analyses from the M06-2X/6-31+G(d) results (FDA/FDANTI 0.90/0.10 and TDA/TDB 0.80/0.20) indicate that if anti conformers were to exist in the crystals, they would need to adapt to an environment that is largely determined by the syn conformers. Disorder in TAP is a reasonable result based upon the structural similarity of the syn and anti conformers. The thiophenyl rings differ by approximately 180° between the syn and anti conformers in both experimental and calculated conformers, while the phenyl–amide twist angles remain relatively unchanged. For the FAP conformers shown in Fig. 4
, the amide–phenyl plane angle in FDANTI (34.6°) is larger than the amide–phenyl plane angles in the calculated and experimentally observed syn conformers FDA (25.7°), FDB (25.6°), FXA (26.0°), and FXB (28.8°). In order to occupy the equivalent crystallographic sites as the syn conformers in FAP, the amide–phenyl twist angle in FDANTI would have to decrease on the order of 6–9°. This amount of twist is much larger than the modest amide–phenyl twist angle differences between the FX and FD syn conformers of no more than 3°. Rather than accommodate this 6–9° twisting of the amide–phenyl angle, the syn conformers in FAP appear to prefer to be in an ordered crystal environment with the exclusion of the anti conformers.
9. Hirshfeld surfaces and close contacts
Hirshfeld surfaces were calculated using CrystalExplorer (Version 21.5; Spackman et al., 2021
). Fig. 6
contains views of the Hirshfeld surfaces with shape index plots for FXA, FXB, and TXA. It is not possible to develop a Hirshfeld surface for TAP using the disordered crystalline environment. As the nearest approximation, a Hirshfeld surface was developed for TXA using a hypothetical crystal environment that was only composed of the major conformer TXA. The shape index plots show the presence of closest contacts as the red indentations in the surface function. Fig. 6
contains isolated views of external hydrogen contacts with internal C, S, and O atoms. Hydrogen bonding, electrophilic association with the ring O and S atoms, and π-stacking contacts are revealed in these surface plots. Fingerprint plots for C⋯H/H⋯C contacts involving both internal and external H atoms are shown in Fig. 7
for FXA, FXB, and TXA. These plots reveal that the packing of these contacts around TXA (35.7%) occupies a larger relative area than in FXA (27.4%) and FXB (28.9%). These close H-atom contacts may be a part of the explanation for the C—H bonds in the experimental phenyl rings having angular deviations from the values predicted by M06-2X/6-31+G(d) calculations on the isolated molecules. Three-dimensional videos and additional fingerprint plots for these Hirshfeld surfaces can be found in the supporting information.
| Figure 6 The Hirshfeld surfaces, with shape index plots. |
| | Figure 7 Fingerprint plots for C⋯H/H⋯C close contacts around (a) FXA, (b) FXB, and (c) TXA. |
10. Molecular interaction energy (MIE) analysis in FAP and TAP
In order to find the underlying reasons for the difference in the five-membered ring–amide plane orientations in FAP and TAP, we investigated the energetics of the packing of the conformers in both crystal structures.
Images of the nearest-neighbor environments are shown in Figs. 8
(a)–(f). The molecules are color-coded with respect to molecular interaction energy (MIE) with the central molecule. The interaction energies were calculated using Tonto (Jayatilaka & Grimwood, 2003
) using the CE-B3LYP/6-31G(d,p) modeling in CrystalExplorer (Spackman et al., 2021
). The MIE values are very similar in both crystals, with average values of −38 (7) kJ mol−1 for FAP and −35 (8) kJ mol−1 for TAP. For TAP, Figs. 8(c)–(f)
show MIEs for central TXA or TXB molecules surrounded by hypothetical homogeneous environments composed of either TXA or TXB conformers. Fig. 8(g)
summarizes the results for Etot values included in Figs. 8(c)–(f)
. These results demonstrate no significant energy differences for conformer interactions of type A–A, B–B, or A–B. Videos with three-dimensional views of the MIEs can be found in the supporting information.
| Figure 8 Results of MIE calculations (kJ mol−1) for nearest-neighbor packing around (a) FXA, (b) FXB, (c) TXA surrounded by A conformers, (d) TXA surrounded by B conformers, (e) TXB surrounded by A conformers and (f) TXB surrounded by B conformers. R is the separation of molecular centroids in Ångstroms. Etot (total interaction energy) is the sum of Eele (electrostatic), Epol (polarization), Edis (dispersion) and Erep (repulsion) terms. Fig. 8(g) contains the summary of Etot values in Figs. 8(c)–(f). |
There is a significant difference in the π-stacking of aryl rings involved in the hydrogen-bonded molecules. Hydrogen bonds were revealed using SHELXL (Sheldrick, 2015b
) and verified using PLATON (Spek, 2020
). The hydrogen-bond interactions in FAP and TAP are highlighted in Figs. 9
(a) and 9(b). The numbers assigned to molecules are the same as used in Fig. 8
. In FAP, the furanyl–furanyl planar interactions of the central molecule to molecules 1 and 3 are T-shaped with an angle of 57.8 (2)°. In TAP, the thiophenyl–thiophenyl interactions of the central molecule to molecules 1 and 4 are parallel-displaced. The MIE values, shown in Fig. 8
and referenced in Fig. 9
, reveal a larger electrostatic interaction between molecules with hydrogen bonding in FAP, while larger dispersion interactions exist between the hydrogen-bonded molecules in TAP. This observation is consistent with T-shaped π-stacking being driven by electrostatic interactions, while parallel displacement interactions are driven more by dispersion (Banerjee et al., 2019
). It is expected that a ring containing an O atom (FAP) would tend towards harder electrostatic interactions, while a ring containing an S atom (TAP) would tend towards softer dispersive interactions. Rather than maintain a parallel orientation between aryl rings in hydrogen-bonded molecules similar to that in TAP, the two furanyl conformers rotate relative to each other to establish the asymmetric unit with T-shaped furanyl stacking. This arrangement of the hydrogen bond does not require significant tilting of the furanyl ring–amide plane within the FAP conformers. The tilting of the thiophenyl–amide plane in the of TAP allows for the establishment of the hydrogen bond while developing a dispersive interaction between parallel π-clouds of thiophenyl rings in neighboring molecules. The difference in hydrogen-bonding modes is a significant feature that contributes to the difference in the crystal environments of FAP and TAP.
| Figure 9 Electrostatic and dispersion contributions (kJ mol−1) to the interaction energies for hydrogen-bonded molecules in (a) FAP and (b) TAP, with Eele = −42 and Edis = −23 for I, Eele = −45 and Edis = −24 for II, Eele = −36 and Edis = −29 for III, and Eele = −36 and Edis = −29 for IV. Approximate uncertainties are ±1 kJ mol−1. The molecule numbering is the same as in Fig. 8 |
11. Summary
The investigation of the crystal packing in FAP and TAP has revealed similarities and differences in how these two very similar molecules, N-(furan-3-yl)benzamide and N-(thiophen-3-yl)benzamide, form crystalline states. While hydrogen bonding is present in both crystals, the orientations of the molecules in the hydrogen bonding is quite different. In FAP, the furanyl molecules exhibit intermolecular twists while maintaining molecular conformations that are very similar to those of the gas-phase molecules that were predicted by DFT optimization. In TAP, the thiophenyl molecules have amide–thiophenyl twist angles that differ in excess of 20° from the predicted gas-phase molecules. This degree of twisting allows the hydrogen bonding in TAP to form with parallel-displaced molecules. This difference in behavior is correlated with a larger electrostatic interaction energy between the molecules in FAP that favors the T-stacking of the furanyl rings. The disorder in TAP is the result of the similarities between the syn (TXA) and anti (TXB) conformers with coplanar thiophenyl and phenyl rings. These conformers occupy, at random, the same crystallographic site, while the molecular interaction energies between possible conformer pairs vary by less that 1 kJ mol−1. A similar type of disorder involving conformers in FAP is less probable due to the increased phenyl–amide twist angle in the calculated gas-phase anti conformer FDANTI versus the syn conformers FDA or FDB.
Supporting information
contains datablocks TAP, FAP, global. DOI: https://doi.org/10.1107/S2053229625006886/ef3068sup1.cif
Structure factors: contains datablock TAP. DOI: https://doi.org/10.1107/S2053229625006886/ef3068TAPsup2.hkl
Structure factors: contains datablock FAP. DOI: https://doi.org/10.1107/S2053229625006886/ef3068FAPsup3.hkl
Details of models. DOI: https://doi.org/10.1107/S2053229625006886/ef3068sup4.pdf
Comparison of bond lengths and angles. DOI: https://doi.org/10.1107/S2053229625006886/ef3068sup5.pdf
Fingerprint plots, Hirshfeld surfaces and molecular interaction energies. DOI: https://doi.org/10.1107/S2053229625006886/ef3068sup6.docx
Supporting information file. DOI: https://doi.org/10.1107/S2053229625006886/ef3068TAPsup7.cml
Supporting information file. DOI: https://doi.org/10.1107/S2053229625006886/ef3068FAPsup8.cml
| C11H9NOS | F(000) = 212 |
| Mr = 203.25 | Dx = 1.413 Mg m−3 Dm = 1.35 (3) Mg m−3 Dm measured by flotation in potassium carbonate solution |
| Triclinic, P1 | Melting point: 427 K |
| a = 5.2909 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 7.6252 (5) Å | Cell parameters from 6954 reflections |
| c = 12.1529 (8) Å | θ = 2.7–26.4° |
| α = 83.865 (2)° | µ = 0.30 mm−1 |
| β = 78.470 (2)° | T = 173 K |
| γ = 88.762 (2)° | Parallelpiped, colourless |
| V = 477.65 (6) Å3 | 0.41 × 0.23 × 0.11 mm |
| Z = 2 |
| Bruker SMART APEX II CCD diffractometer | 1970 independent reflections |
| Radiation source: sealed X-ray tube | 1674 reflections with I > 2σ(I) |
| Detector resolution: 8.53 pixels mm-1 | Rint = 0.057 |
| rotating crystal scans | θmax = 26.4°, θmin = 1.7° |
| Absorption correction: multi-scan (SADABS; Bruker, 2018) | h = −6→6 |
| Tmin = 0.741, Tmax = 1.000 | k = −9→9 |
| 13278 measured reflections | l = −15→15 |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.042 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.115 | w = 1/[σ2(Fo2) + (0.0493P)2 + 0.2673P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.05 | (Δ/σ)max < 0.001 |
| 1970 reflections | Δρmax = 0.30 e Å−3 |
| 167 parameters | Δρmin = −0.28 e Å−3 |
| 7 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| O1 | −0.1287 (2) | 0.2405 (2) | 0.53846 (12) | 0.0499 (4) | |
| N1 | 0.2795 (3) | 0.2386 (2) | 0.57014 (12) | 0.0330 (4) | |
| C1 | 0.1041 (3) | 0.2499 (2) | 0.50193 (15) | 0.0319 (4) | |
| C2 | 0.2125 (3) | 0.2733 (2) | 0.37796 (14) | 0.0291 (4) | |
| C3 | 0.0703 (4) | 0.2069 (2) | 0.30678 (16) | 0.0346 (4) | |
| C4 | 0.1559 (4) | 0.2293 (3) | 0.19123 (17) | 0.0413 (5) | |
| C5 | 0.3815 (4) | 0.3210 (3) | 0.14528 (17) | 0.0421 (5) | |
| C6 | 0.5229 (4) | 0.3882 (3) | 0.21505 (17) | 0.0400 (5) | |
| C7 | 0.4407 (3) | 0.3640 (2) | 0.33099 (16) | 0.0347 (4) | |
| C8 | 0.2173 (3) | 0.2173 (2) | 0.68901 (14) | 0.0298 (4) | |
| C9 | 0.3833 (4) | 0.1279 (3) | 0.75218 (15) | 0.0378 (4) | |
| C11 | −0.0008 (4) | 0.2800 (3) | 0.75581 (15) | 0.0375 (4) | |
| C10A | 0.2963 (7) | 0.1217 (7) | 0.8636 (3) | 0.0427 (2) | 0.7018 (16) |
| S1A | −0.00570 (18) | 0.23139 (17) | 0.89493 (6) | 0.0427 (2) | 0.7018 (16) |
| C10B | −0.0046 (17) | 0.2407 (18) | 0.8655 (5) | 0.0427 (2) | 0.2982 (16) |
| H10B | −0.140418 | 0.272729 | 0.923742 | 0.051* | 0.2982 (16) |
| S1B | 0.2743 (4) | 0.1213 (4) | 0.89031 (14) | 0.0427 (2) | 0.2982 (16) |
| H1 | 0.462 (2) | 0.235 (3) | 0.5360 (17) | 0.048 (6)* | |
| H9 | 0.543 (4) | 0.080 (3) | 0.7220 (19) | 0.046 (6)* | |
| H11 | −0.139 (4) | 0.344 (3) | 0.7308 (18) | 0.045 (6)* | |
| H10A | 0.385 (6) | 0.067 (4) | 0.935 (3) | 0.051 (9)* | 0.7018 (16) |
| H3 | −0.086 (4) | 0.145 (3) | 0.3390 (17) | 0.038 (5)* | |
| H7 | 0.540 (4) | 0.411 (3) | 0.3815 (19) | 0.046 (6)* | |
| H6 | 0.674 (5) | 0.449 (3) | 0.1854 (19) | 0.051 (6)* | |
| H4 | 0.048 (5) | 0.181 (3) | 0.144 (2) | 0.054 (6)* | |
| H5 | 0.437 (5) | 0.344 (3) | 0.065 (2) | 0.057 (7)* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0274 (7) | 0.0870 (12) | 0.0351 (8) | −0.0041 (7) | −0.0060 (6) | −0.0054 (7) |
| N1 | 0.0261 (7) | 0.0453 (9) | 0.0279 (8) | −0.0009 (6) | −0.0058 (6) | −0.0043 (6) |
| C1 | 0.0275 (8) | 0.0363 (9) | 0.0326 (9) | −0.0023 (7) | −0.0071 (7) | −0.0041 (7) |
| C2 | 0.0279 (8) | 0.0300 (8) | 0.0303 (9) | 0.0032 (6) | −0.0083 (7) | −0.0037 (7) |
| C3 | 0.0324 (9) | 0.0362 (10) | 0.0373 (10) | −0.0023 (7) | −0.0100 (8) | −0.0066 (8) |
| C4 | 0.0467 (11) | 0.0454 (11) | 0.0368 (10) | 0.0036 (9) | −0.0162 (9) | −0.0130 (8) |
| C5 | 0.0481 (11) | 0.0485 (12) | 0.0284 (10) | 0.0072 (9) | −0.0052 (8) | −0.0048 (8) |
| C6 | 0.0367 (10) | 0.0402 (11) | 0.0401 (11) | −0.0021 (8) | −0.0024 (8) | 0.0006 (8) |
| C7 | 0.0336 (9) | 0.0361 (10) | 0.0359 (10) | −0.0026 (7) | −0.0098 (7) | −0.0038 (8) |
| C8 | 0.0292 (8) | 0.0314 (9) | 0.0295 (9) | −0.0064 (7) | −0.0067 (7) | −0.0035 (7) |
| C9 | 0.0326 (9) | 0.0426 (11) | 0.0395 (11) | 0.0002 (8) | −0.0113 (8) | −0.0019 (8) |
| C11 | 0.0338 (9) | 0.0445 (11) | 0.0341 (10) | 0.0010 (8) | −0.0059 (8) | −0.0059 (8) |
| C10A | 0.0430 (4) | 0.0572 (4) | 0.0262 (5) | −0.0037 (3) | −0.0037 (3) | −0.0024 (4) |
| S1A | 0.0430 (4) | 0.0572 (4) | 0.0262 (5) | −0.0037 (3) | −0.0037 (3) | −0.0024 (4) |
| C10B | 0.0430 (4) | 0.0572 (4) | 0.0262 (5) | −0.0037 (3) | −0.0037 (3) | −0.0024 (4) |
| S1B | 0.0430 (4) | 0.0572 (4) | 0.0262 (5) | −0.0037 (3) | −0.0037 (3) | −0.0024 (4) |
| O1—C1 | 1.224 (2) | C6—H6 | 0.92 (2) |
| N1—C1 | 1.358 (2) | C7—H7 | 0.98 (2) |
| N1—C8 | 1.408 (2) | C8—C11 | 1.380 (3) |
| N1—H1 | 0.974 (10) | C8—C9 | 1.399 (2) |
| C1—C2 | 1.494 (2) | C9—C10A | 1.336 (4) |
| C2—C7 | 1.392 (2) | C9—S1B | 1.658 (2) |
| C2—C3 | 1.394 (2) | C9—H9 | 0.93 (2) |
| C3—C4 | 1.380 (3) | C11—C10B | 1.331 (5) |
| C3—H3 | 0.95 (2) | C11—S1A | 1.6869 (18) |
| C4—C5 | 1.383 (3) | C11—H11 | 0.95 (2) |
| C4—H4 | 0.98 (2) | C10A—S1A | 1.779 (3) |
| C5—C6 | 1.380 (3) | C10A—H10A | 1.11 (3) |
| C5—H5 | 0.96 (3) | C10B—S1B | 1.777 (4) |
| C6—C7 | 1.383 (3) | C10B—H10B | 0.9500 |
| C1—N1—C8 | 124.73 (15) | C2—C7—H7 | 118.9 (13) |
| C1—N1—H1 | 118.8 (13) | C11—C8—C9 | 112.69 (17) |
| C8—N1—H1 | 116.3 (13) | C11—C8—N1 | 126.24 (16) |
| O1—C1—N1 | 122.79 (17) | C9—C8—N1 | 121.07 (16) |
| O1—C1—C2 | 121.37 (15) | C10A—C9—C8 | 113.2 (2) |
| N1—C1—C2 | 115.84 (15) | C8—C9—S1B | 112.93 (16) |
| C7—C2—C3 | 119.17 (17) | C10A—C9—H9 | 121.6 (14) |
| C7—C2—C1 | 123.18 (15) | C8—C9—H9 | 125.1 (14) |
| C3—C2—C1 | 117.60 (16) | S1B—C9—H9 | 121.9 (14) |
| C4—C3—C2 | 120.38 (18) | C10B—C11—C8 | 112.4 (3) |
| C4—C3—H3 | 120.6 (12) | C8—C11—S1A | 112.60 (14) |
| C2—C3—H3 | 119.0 (12) | C10B—C11—H11 | 120.7 (13) |
| C3—C4—C5 | 120.04 (18) | C8—C11—H11 | 126.9 (13) |
| C3—C4—H4 | 117.5 (14) | S1A—C11—H11 | 120.5 (13) |
| C5—C4—H4 | 122.5 (14) | C9—C10A—S1A | 111.1 (3) |
| C6—C5—C4 | 119.99 (19) | C9—C10A—H10A | 130.9 (17) |
| C6—C5—H5 | 119.2 (15) | S1A—C10A—H10A | 117.9 (17) |
| C4—C5—H5 | 120.8 (15) | C11—S1A—C10A | 90.34 (16) |
| C5—C6—C7 | 120.37 (19) | C11—C10B—S1B | 112.0 (4) |
| C5—C6—H6 | 120.8 (15) | C11—C10B—H10B | 124.0 |
| C7—C6—H6 | 118.8 (15) | S1B—C10B—H10B | 124.0 |
| C6—C7—C2 | 120.04 (17) | C9—S1B—C10B | 89.9 (3) |
| C6—C7—H7 | 121.1 (13) | ||
| C8—N1—C1—O1 | −0.8 (3) | C1—N1—C8—C9 | 149.82 (18) |
| C8—N1—C1—C2 | 179.66 (15) | C11—C8—C9—C10A | 0.0 (3) |
| O1—C1—C2—C7 | 148.68 (19) | N1—C8—C9—C10A | 179.2 (3) |
| N1—C1—C2—C7 | −31.8 (2) | C11—C8—C9—S1B | −0.1 (2) |
| O1—C1—C2—C3 | −28.5 (3) | N1—C8—C9—S1B | 179.08 (17) |
| N1—C1—C2—C3 | 151.03 (17) | C9—C8—C11—C10B | −0.2 (7) |
| C7—C2—C3—C4 | 0.6 (3) | N1—C8—C11—C10B | −179.3 (7) |
| C1—C2—C3—C4 | 177.89 (17) | C9—C8—C11—S1A | 0.1 (2) |
| C2—C3—C4—C5 | −1.2 (3) | N1—C8—C11—S1A | −179.05 (14) |
| C3—C4—C5—C6 | 0.8 (3) | C8—C9—C10A—S1A | −0.1 (4) |
| C4—C5—C6—C7 | 0.2 (3) | C8—C11—S1A—C10A | −0.1 (2) |
| C5—C6—C7—C2 | −0.8 (3) | C9—C10A—S1A—C11 | 0.2 (4) |
| C3—C2—C7—C6 | 0.4 (3) | C8—C11—C10B—S1B | 0.4 (11) |
| C1—C2—C7—C6 | −176.73 (17) | C8—C9—S1B—C10B | 0.3 (6) |
| C1—N1—C8—C11 | −31.1 (3) | C11—C10B—S1B—C9 | −0.4 (10) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···O1i | 0.97 (1) | 2.17 (1) | 3.078 (2) | 154 (2) |
| Symmetry code: (i) x+1, y, z. |
| C11H9NO2 | Z = 4 |
| Mr = 187.19 | F(000) = 392 |
| Triclinic, P1 | Dx = 1.335 Mg m−3 |
| a = 9.0111 (3) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 9.8038 (3) Å | Cell parameters from 9231 reflections |
| c = 11.3362 (4) Å | θ = 2.2–27.7° |
| α = 109.081 (3)° | µ = 0.09 mm−1 |
| β = 99.580 (3)° | T = 172 K |
| γ = 90.499 (3)° | Parallelpiped, colourless |
| V = 931.11 (6) Å3 | 0.28 × 0.24 × 0.16 mm |
| Rigaku OD SuperNova Dual source diffractometer with an Atlas detector | 4363 independent reflections |
| Radiation source: micro-focus sealed X-ray tube, SuperNova (Mo) X-ray Source | 3580 reflections with I > 2σ(I) |
| Mirror monochromator | Rint = 0.027 |
| Detector resolution: 5.1937 pixels mm-1 | θmax = 27.7°, θmin = 2.2° |
| ω scans | h = −11→11 |
| Absorption correction: gaussian (CrysAlis PRO; Rigaku OD, 2020) | k = −12→12 |
| Tmin = 0.589, Tmax = 1.000 | l = −14→14 |
| 21889 measured reflections |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.047 | All H-atom parameters refined |
| wR(F2) = 0.125 | w = 1/[σ2(Fo2) + (0.0358P)2 + 0.5819P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.09 | (Δ/σ)max < 0.001 |
| 4363 reflections | Δρmax = 0.43 e Å−3 |
| 325 parameters | Δρmin = −0.21 e Å−3 |
| 2 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | ||
| O2B | 0.31100 (15) | 0.92606 (15) | 0.14475 (12) | 0.0433 (3) | |
| O1B | 0.19284 (17) | 1.16489 (13) | 0.48727 (12) | 0.0445 (3) | |
| O1A | 0.26070 (16) | 0.65821 (13) | 0.46386 (12) | 0.0436 (3) | |
| N1B | 0.28195 (16) | 0.94517 (14) | 0.46251 (13) | 0.0304 (3) | |
| O2A | −0.02588 (17) | 0.40167 (16) | 0.13362 (13) | 0.0499 (4) | |
| N1A | 0.17171 (16) | 0.43463 (15) | 0.44552 (14) | 0.0336 (3) | |
| C8B | 0.30352 (18) | 0.91697 (16) | 0.33742 (15) | 0.0295 (3) | |
| C2B | 0.20979 (18) | 1.07866 (16) | 0.66239 (15) | 0.0304 (3) | |
| C1A | 0.25737 (19) | 0.55835 (17) | 0.50642 (16) | 0.0319 (4) | |
| C2A | 0.35395 (19) | 0.56779 (17) | 0.63096 (16) | 0.0323 (4) | |
| C1B | 0.22725 (19) | 1.06763 (16) | 0.53109 (16) | 0.0310 (3) | |
| C8A | 0.08253 (19) | 0.40288 (18) | 0.32530 (16) | 0.0342 (4) | |
| C11B | 0.2766 (2) | 0.9986 (2) | 0.26170 (17) | 0.0362 (4) | |
| C9A | −0.0113 (2) | 0.2719 (2) | 0.26277 (18) | 0.0382 (4) | |
| C9B | 0.3584 (2) | 0.78542 (19) | 0.26439 (18) | 0.0377 (4) | |
| C7A | 0.3157 (2) | 0.49179 (19) | 0.70655 (18) | 0.0380 (4) | |
| C7B | 0.3024 (2) | 1.0114 (2) | 0.73419 (17) | 0.0380 (4) | |
| C3B | 0.0988 (2) | 1.1635 (2) | 0.71490 (18) | 0.0389 (4) | |
| C3A | 0.4849 (2) | 0.65950 (19) | 0.67193 (18) | 0.0390 (4) | |
| C10A | −0.0726 (2) | 0.2780 (2) | 0.14880 (19) | 0.0431 (4) | |
| C11A | 0.0708 (2) | 0.4795 (2) | 0.24367 (18) | 0.0403 (4) | |
| C10B | 0.3605 (2) | 0.7969 (2) | 0.15032 (19) | 0.0439 (4) | |
| C6A | 0.4077 (2) | 0.5072 (2) | 0.82095 (19) | 0.0443 (5) | |
| C6B | 0.2833 (2) | 1.0287 (2) | 0.85718 (19) | 0.0462 (5) | |
| C5B | 0.1717 (2) | 1.1114 (2) | 0.90777 (18) | 0.0479 (5) | |
| C5A | 0.5375 (2) | 0.5977 (2) | 0.86116 (18) | 0.0453 (5) | |
| C4B | 0.0796 (2) | 1.1792 (2) | 0.83709 (19) | 0.0462 (5) | |
| C4A | 0.5761 (2) | 0.6735 (2) | 0.78663 (19) | 0.0456 (5) | |
| H7B | 0.382 (2) | 0.952 (2) | 0.6991 (19) | 0.044 (5)* | |
| H7A | 0.222 (2) | 0.426 (2) | 0.676 (2) | 0.049 (6)* | |
| H3A | 0.514 (2) | 0.716 (2) | 0.616 (2) | 0.052 (6)* | |
| H3B | 0.038 (2) | 1.214 (2) | 0.666 (2) | 0.050 (6)* | |
| H4B | 0.003 (3) | 1.236 (2) | 0.873 (2) | 0.055 (6)* | |
| H5B | 0.155 (3) | 1.123 (2) | 0.993 (2) | 0.056 (6)* | |
| H5A | 0.602 (3) | 0.608 (2) | 0.940 (2) | 0.060 (7)* | |
| H6A | 0.377 (3) | 0.451 (3) | 0.871 (2) | 0.064 (7)* | |
| H6B | 0.350 (3) | 0.980 (3) | 0.904 (2) | 0.062 (7)* | |
| H4A | 0.667 (3) | 0.738 (3) | 0.815 (2) | 0.059 (7)* | |
| H1A | 0.183 (2) | 0.357 (2) | 0.4812 (19) | 0.050 (6)* | |
| H11B | 0.234 (2) | 1.088 (2) | 0.2707 (18) | 0.038 (5)* | |
| H11A | 0.118 (2) | 0.567 (2) | 0.2491 (18) | 0.038 (5)* | |
| H9B | 0.390 (2) | 0.710 (2) | 0.2929 (19) | 0.043 (5)* | |
| H9A | −0.027 (2) | 0.200 (2) | 0.295 (2) | 0.053 (6)* | |
| H10B | 0.388 (3) | 0.736 (2) | 0.073 (2) | 0.057 (6)* | |
| H10A | −0.139 (3) | 0.217 (3) | 0.083 (2) | 0.069 (7)* | |
| H1B | 0.287 (2) | 0.8661 (19) | 0.4924 (19) | 0.047 (6)* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O2B | 0.0514 (8) | 0.0488 (8) | 0.0326 (7) | 0.0048 (6) | 0.0119 (6) | 0.0152 (6) |
| O1B | 0.0734 (10) | 0.0246 (6) | 0.0412 (7) | 0.0117 (6) | 0.0174 (7) | 0.0151 (5) |
| O1A | 0.0629 (9) | 0.0266 (6) | 0.0442 (7) | −0.0006 (6) | 0.0038 (6) | 0.0184 (5) |
| N1B | 0.0407 (8) | 0.0223 (6) | 0.0317 (7) | 0.0040 (5) | 0.0108 (6) | 0.0117 (6) |
| O2A | 0.0573 (9) | 0.0547 (9) | 0.0375 (7) | 0.0109 (7) | 0.0053 (6) | 0.0165 (6) |
| N1A | 0.0394 (8) | 0.0257 (7) | 0.0375 (8) | 0.0034 (6) | 0.0056 (6) | 0.0134 (6) |
| C8B | 0.0315 (8) | 0.0247 (7) | 0.0324 (8) | −0.0007 (6) | 0.0073 (6) | 0.0090 (6) |
| C2B | 0.0346 (8) | 0.0228 (7) | 0.0317 (8) | −0.0043 (6) | 0.0063 (7) | 0.0062 (6) |
| C1A | 0.0394 (9) | 0.0235 (7) | 0.0355 (9) | 0.0053 (6) | 0.0113 (7) | 0.0111 (7) |
| C2A | 0.0386 (9) | 0.0248 (8) | 0.0347 (9) | 0.0075 (6) | 0.0123 (7) | 0.0086 (7) |
| C1B | 0.0375 (9) | 0.0222 (7) | 0.0337 (8) | −0.0001 (6) | 0.0081 (7) | 0.0089 (6) |
| C8A | 0.0346 (9) | 0.0329 (8) | 0.0364 (9) | 0.0107 (7) | 0.0092 (7) | 0.0117 (7) |
| C11B | 0.0432 (10) | 0.0349 (9) | 0.0333 (9) | 0.0041 (7) | 0.0107 (7) | 0.0129 (7) |
| C9A | 0.0399 (10) | 0.0329 (9) | 0.0405 (10) | 0.0035 (7) | 0.0088 (8) | 0.0097 (8) |
| C9B | 0.0437 (10) | 0.0306 (9) | 0.0399 (10) | 0.0052 (7) | 0.0144 (8) | 0.0097 (8) |
| C7A | 0.0440 (10) | 0.0341 (9) | 0.0388 (10) | 0.0061 (8) | 0.0122 (8) | 0.0136 (8) |
| C7B | 0.0360 (9) | 0.0411 (10) | 0.0360 (9) | 0.0005 (8) | 0.0060 (7) | 0.0118 (8) |
| C3B | 0.0423 (10) | 0.0344 (9) | 0.0386 (10) | 0.0026 (7) | 0.0105 (8) | 0.0086 (8) |
| C3A | 0.0434 (10) | 0.0337 (9) | 0.0408 (10) | 0.0015 (7) | 0.0093 (8) | 0.0128 (8) |
| C10A | 0.0422 (11) | 0.0416 (10) | 0.0379 (10) | 0.0026 (8) | 0.0022 (8) | 0.0055 (8) |
| C11A | 0.0457 (11) | 0.0382 (10) | 0.0383 (10) | 0.0090 (8) | 0.0073 (8) | 0.0146 (8) |
| C10B | 0.0507 (11) | 0.0413 (10) | 0.0377 (10) | 0.0044 (8) | 0.0157 (8) | 0.0066 (8) |
| C6A | 0.0573 (12) | 0.0440 (10) | 0.0405 (10) | 0.0131 (9) | 0.0185 (9) | 0.0210 (9) |
| C6B | 0.0438 (11) | 0.0592 (13) | 0.0353 (10) | −0.0038 (9) | 0.0002 (8) | 0.0189 (9) |
| C5B | 0.0491 (11) | 0.0599 (13) | 0.0285 (9) | −0.0131 (9) | 0.0079 (8) | 0.0062 (9) |
| C5A | 0.0502 (12) | 0.0506 (11) | 0.0315 (10) | 0.0145 (9) | 0.0036 (8) | 0.0104 (8) |
| C4B | 0.0470 (11) | 0.0486 (11) | 0.0384 (10) | 0.0013 (9) | 0.0164 (9) | 0.0042 (9) |
| C4A | 0.0420 (11) | 0.0464 (11) | 0.0442 (11) | 0.0001 (9) | 0.0036 (8) | 0.0117 (9) |
| O2B—C10B | 1.363 (2) | C9A—H9A | 0.92 (2) |
| O2B—C11B | 1.372 (2) | C9B—C10B | 1.337 (3) |
| O1B—C1B | 1.2312 (19) | C9B—H9B | 0.93 (2) |
| O1A—C1A | 1.2269 (19) | C7A—C6A | 1.380 (3) |
| N1B—C1B | 1.348 (2) | C7A—H7A | 1.00 (2) |
| N1B—C8B | 1.400 (2) | C7B—C6B | 1.388 (3) |
| N1B—H1B | 0.941 (15) | C7B—H7B | 0.98 (2) |
| O2A—C10A | 1.352 (2) | C3B—C4B | 1.383 (3) |
| O2A—C11A | 1.379 (2) | C3B—H3B | 0.96 (2) |
| N1A—C1A | 1.343 (2) | C3A—C4A | 1.382 (3) |
| N1A—C8A | 1.398 (2) | C3A—H3A | 1.02 (2) |
| N1A—H1A | 0.970 (15) | C10A—H10A | 0.91 (3) |
| C8B—C11B | 1.349 (2) | C11A—H11A | 0.93 (2) |
| C8B—C9B | 1.429 (2) | C10B—H10B | 0.96 (2) |
| C2B—C7B | 1.389 (2) | C6A—C5A | 1.380 (3) |
| C2B—C3B | 1.391 (2) | C6A—H6A | 0.98 (2) |
| C2B—C1B | 1.492 (2) | C6B—C5B | 1.378 (3) |
| C1A—C2A | 1.504 (2) | C6B—H6B | 0.96 (2) |
| C2A—C7A | 1.386 (2) | C5B—C4B | 1.382 (3) |
| C2A—C3A | 1.394 (2) | C5B—H5B | 0.97 (2) |
| C8A—C11A | 1.362 (3) | C5A—C4A | 1.375 (3) |
| C8A—C9A | 1.433 (2) | C5A—H5A | 0.96 (2) |
| C11B—H11B | 0.95 (2) | C4B—H4B | 0.95 (2) |
| C9A—C10A | 1.339 (3) | C4A—H4A | 0.97 (2) |
| C10B—O2B—C11B | 106.20 (14) | C2A—C7A—H7A | 118.8 (12) |
| C1B—N1B—C8B | 123.73 (14) | C6B—C7B—C2B | 119.94 (18) |
| C1B—N1B—H1B | 118.6 (13) | C6B—C7B—H7B | 119.4 (12) |
| C8B—N1B—H1B | 116.3 (13) | C2B—C7B—H7B | 120.7 (12) |
| C10A—O2A—C11A | 107.18 (15) | C4B—C3B—C2B | 120.27 (19) |
| C1A—N1A—C8A | 124.03 (14) | C4B—C3B—H3B | 120.8 (13) |
| C1A—N1A—H1A | 118.0 (13) | C2B—C3B—H3B | 118.9 (13) |
| C8A—N1A—H1A | 117.4 (13) | C4A—C3A—C2A | 120.13 (18) |
| C11B—C8B—N1B | 129.87 (15) | C4A—C3A—H3A | 120.1 (12) |
| C11B—C8B—C9B | 106.75 (15) | C2A—C3A—H3A | 119.7 (12) |
| N1B—C8B—C9B | 123.37 (15) | C9A—C10A—O2A | 111.37 (17) |
| C7B—C2B—C3B | 119.47 (16) | C9A—C10A—H10A | 132.5 (16) |
| C7B—C2B—C1B | 122.54 (16) | O2A—C10A—H10A | 116.1 (16) |
| C3B—C2B—C1B | 117.97 (16) | C8A—C11A—O2A | 108.58 (17) |
| O1A—C1A—N1A | 123.10 (16) | C8A—C11A—H11A | 132.0 (12) |
| O1A—C1A—C2A | 120.84 (15) | O2A—C11A—H11A | 119.3 (12) |
| N1A—C1A—C2A | 116.04 (14) | C9B—C10B—O2B | 111.16 (17) |
| C7A—C2A—C3A | 119.44 (17) | C9B—C10B—H10B | 135.3 (14) |
| C7A—C2A—C1A | 122.55 (16) | O2B—C10B—H10B | 113.5 (14) |
| C3A—C2A—C1A | 118.00 (15) | C5A—C6A—C7A | 120.76 (18) |
| O1B—C1B—N1B | 121.65 (15) | C5A—C6A—H6A | 122.4 (14) |
| O1B—C1B—C2B | 121.83 (15) | C7A—C6A—H6A | 116.9 (15) |
| N1B—C1B—C2B | 116.52 (14) | C5B—C6B—C7B | 120.2 (2) |
| C11A—C8A—N1A | 129.48 (17) | C5B—C6B—H6B | 122.6 (14) |
| C11A—C8A—C9A | 107.04 (17) | C7B—C6B—H6B | 117.3 (14) |
| N1A—C8A—C9A | 123.42 (16) | C6B—C5B—C4B | 120.23 (18) |
| C8B—C11B—O2B | 109.84 (16) | C6B—C5B—H5B | 121.3 (14) |
| C8B—C11B—H11B | 133.9 (12) | C4B—C5B—H5B | 118.5 (14) |
| O2B—C11B—H11B | 116.1 (12) | C4A—C5A—C6A | 119.81 (19) |
| C10A—C9A—C8A | 105.83 (17) | C4A—C5A—H5A | 119.2 (14) |
| C10A—C9A—H9A | 127.4 (14) | C6A—C5A—H5A | 121.0 (14) |
| C8A—C9A—H9A | 126.7 (14) | C5B—C4B—C3B | 119.93 (19) |
| C10B—C9B—C8B | 106.05 (17) | C5B—C4B—H4B | 119.3 (14) |
| C10B—C9B—H9B | 127.8 (13) | C3B—C4B—H4B | 120.7 (14) |
| C8B—C9B—H9B | 126.1 (13) | C5A—C4A—C3A | 120.15 (19) |
| C6A—C7A—C2A | 119.72 (18) | C5A—C4A—H4A | 120.2 (14) |
| C6A—C7A—H7A | 121.4 (12) | C3A—C4A—H4A | 119.6 (14) |
| C1B—N1B—C8B—C11B | −0.2 (3) | C3A—C2A—C7A—C6A | −0.3 (3) |
| C1B—N1B—C8B—C9B | −178.55 (16) | C1A—C2A—C7A—C6A | −178.81 (16) |
| C8A—N1A—C1A—O1A | 3.0 (3) | C3B—C2B—C7B—C6B | 0.2 (3) |
| C8A—N1A—C1A—C2A | −175.73 (15) | C1B—C2B—C7B—C6B | 178.28 (16) |
| O1A—C1A—C2A—C7A | 153.91 (17) | C7B—C2B—C3B—C4B | −0.8 (3) |
| N1A—C1A—C2A—C7A | −27.4 (2) | C1B—C2B—C3B—C4B | −178.96 (16) |
| O1A—C1A—C2A—C3A | −24.6 (2) | C7A—C2A—C3A—C4A | 0.4 (3) |
| N1A—C1A—C2A—C3A | 154.10 (16) | C1A—C2A—C3A—C4A | 179.01 (17) |
| C8B—N1B—C1B—O1B | −0.4 (3) | C8A—C9A—C10A—O2A | −0.1 (2) |
| C8B—N1B—C1B—C2B | 179.22 (14) | C11A—O2A—C10A—C9A | 0.0 (2) |
| C7B—C2B—C1B—O1B | −150.48 (18) | N1A—C8A—C11A—O2A | 176.97 (16) |
| C3B—C2B—C1B—O1B | 27.6 (2) | C9A—C8A—C11A—O2A | −0.1 (2) |
| C7B—C2B—C1B—N1B | 29.9 (2) | C10A—O2A—C11A—C8A | 0.0 (2) |
| C3B—C2B—C1B—N1B | −152.06 (16) | C8B—C9B—C10B—O2B | 0.0 (2) |
| C1A—N1A—C8A—C11A | 5.0 (3) | C11B—O2B—C10B—C9B | 0.1 (2) |
| C1A—N1A—C8A—C9A | −178.37 (16) | C2A—C7A—C6A—C5A | 0.1 (3) |
| N1B—C8B—C11B—O2B | −178.43 (16) | C2B—C7B—C6B—C5B | 0.6 (3) |
| C9B—C8B—C11B—O2B | 0.2 (2) | C7B—C6B—C5B—C4B | −0.9 (3) |
| C10B—O2B—C11B—C8B | −0.2 (2) | C7A—C6A—C5A—C4A | −0.1 (3) |
| C11A—C8A—C9A—C10A | 0.1 (2) | C6B—C5B—C4B—C3B | 0.3 (3) |
| N1A—C8A—C9A—C10A | −177.17 (16) | C2B—C3B—C4B—C5B | 0.6 (3) |
| C11B—C8B—C9B—C10B | −0.1 (2) | C6A—C5A—C4A—C3A | 0.2 (3) |
| N1B—C8B—C9B—C10B | 178.60 (16) | C2A—C3A—C4A—C5A | −0.4 (3) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1B—H1B···O1A | 0.94 (2) | 1.96 (2) | 2.8234 (17) | 151 (2) |
| N1A—H1A···O1Bi | 0.97 (2) | 1.91 (2) | 2.8374 (18) | 159 (2) |
| Symmetry code: (i) x, y−1, z. |
| Conformer | Phenyl/Amide | Amide/Heterocycle | Phenyl/Heterocycle |
| FXA | 26.0 (2) | 6.8 (2) | 22.5 (1) |
| FXB | 28.8 (2) | 1.6 (2) | 29.5 (1) |
| FDA | 25.7 | 2.0 | 27.3 |
| FDB | 25.6 | 1.9 | 27.1 |
| FDANTI | 34.6 | 5.1 | 38.5 |
| TXA | 30.3 (1) | 31.1 (1) | 61.3 (1) |
| TXB | 30.3 (1) | 31.0 (2) | 61.2 (2) |
| TDA | 26.5 | 3.1 | 28.8 |
| TDB | 27.1 | 9.0 | 35.4 |
| Calculations performed in Mercury (Macrae et al., 2020) |
Footnotes
‡Retired
Acknowledgements
The authors acknowledge Dr Chip Nataro of Lafayette College for performing the CSD search. The views expressed in this document are those of the authors and do not reflect the official policy or position of the U.S. Naval Academy, Department of the Navy, the Department of Defense, or the U.S. Government.
Funding information
Funding for this research was provided by: Department of Defense HPC Modernization Program (award to Joseph Urban); Office of Naval Research (award to Shirley Lin and Amy H. Roy MacArthur).
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