metal-organic compounds
Tris(piperazinediium) bis[tris(pyridine-2,6-dicarboxylato)neodymate(III)] 15.33-hydrate
aFaculty of Science, Department of Chemistry, Islamic Azad University, Khorramabad Branch, Iran, bFaculty of Chemistry, Teacher Training University, Tehran, Iran, and cDepartment of Chemistry, Faculty of Science, University of Kurdistan, Sanandaj, Iran
*Correspondence e-mail: haghabozorg@yahoo.com
The title compound, (C4H12N2)3[Nd(C7H3NO4)3]2·15.33H2O or (pipzH2)3[Nd(pydc)3]2·15.33H2O (in which pipz is piperazine and pydcH2 is pyridine-2,6-dicarboxylic acid), was synthesized by the reaction of NdCl3·6H2O with the proton-transfer compound (pipzH2)(pydc) in aqueous solution. The nine donor atoms of the three pydc2− ligands form a distorted tricapped trigonal–prismatic arrangement around the NdIII center. Considerable C—O⋯π stacking interactions between CO groups of carboxylate fragments and aromatic rings of pydc2− with distances of 3.135 (5)–3.255 (5) Å are observed. In the a wide range of hydrogen-bonding [of the types O—H⋯O, N—H⋯O and C—H⋯O, with D⋯A distances ranging from 2.608 (10) to 3.278 (7) Å], ion-pairing and C—O⋯π stacking interactions connect the various components into a supramolecular structure. There is a high degree of solvent disorder in the structure; the occupancies of five water molecules refined to 0.6, 0.5, 0.4, 0.25 and 0.25.
Related literature
For related literature, see: Aghabozorg, Attar Gharamaleki, Ghadermazi et al. (2007); Aghabozorg, Attar Gharamaleki, Ghasemikhah et al. (2007); Aghabozorg, Daneshvar et al. (2007). For synthesis, see: Aghabozorg et al. (2006).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: APEX2; program(s) used to solve structure: SHELXTL (Sheldrick, 1998); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536807068328/bq2054sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536807068328/bq2054Isup2.hkl
The proton transfer compound of (pipzH2)(pydc) was prepared according to our reported procedure (Aghabozorg et al., 2006). A solution of NdCl3.6H2O (320 mg, 1 mmol) in water (15 ml) was added to a solution of a solution of proton transfer compound (pipzH2)(pydc) (500 mg, 2 mmol) in water (10 ml) in a 1:2 molar ratio. Colorless crystals of (I) suitable for X-ray characterization were obtained after a few days at room temperature.
There is a high positive residual density of 4.81 e Å-3 at 0.63 Å near the Nd1 center due to considerable absorption effects which could not be completely corrected.
There is a high solvent disorder in the structure. Occupancies of water molecules O7W, O8W, O9W, O10W and O11W were found out by
of occupation factors for this molecules as free variables and are equal to 0.6, 1/2, 0.4, 0.25 and 1/4, respectively.The hydrogen atoms positions on carbon atoms were found geometrically. The hydrogen atoms on ordered water molecules and nitrogen atoms were found from difference Fourier maps, and for disordered water molecules were not located. All hydrogen atoms were treated in riding model with the Uiso(H) parameters equal to 1.2 Ueq(C), 1.2 Ueq(N) and 1.5 Ueq(O) where Ueq(C), Ueq(N) and Ueq(O) are the equivalent thermal parameters of the atoms to which corresponding H atoms are bonded.
Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: APEX2 (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 1998); program(s) used to refine structure: SHELXTL (Sheldrick, 1998); molecular graphics: SHELXTL (Sheldrick, 1998); software used to prepare material for publication: SHELXTL (Sheldrick, 1998).Fig. 1. The molecular structure of (I), displacement ellipsoids are drawn at the 50% probability level. Water molecules are omitted for clarity. | |
Fig. 2. C—O···π stacking interactions between CO groups of carboxylates with aromatic rings of (pydc)2– units. The C—O···π distances (measured to the center of phenyl ring) are 3.134 (5) Å for C6—O2···Cg1 (1 + x, y, z), 3.245 (5) Å for C21—O10···Cg2 (x, y, z) and 3.255 (5) Å for C13—O6···Cg3, [Cg1, Cg2 and Cg3 are the centroids of N1/C1—C5, N2/C8—C12 and N3/C15—C19 rings, respectively]. | |
Fig. 3. Six membrane cyclic rings with acyclic side chains water clusters in the compound (I). | |
Fig. 4. The crystal packing of the compound (I), hydrogen bonds are shown as dashed lines. |
(C4H12N2)3[Nd(C7H3NO4)3]2·15.33H2O | Dx = 1.603 Mg m−3 |
Mr = 915.24 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, P3 | Cell parameters from 9656 reflections |
Hall symbol: -P 3 | θ = 2.6–31.5° |
a = 25.5045 (9) Å | µ = 1.46 mm−1 |
c = 10.0984 (7) Å | T = 100 K |
V = 5688.7 (5) Å3 | Prism, pink |
Z = 6 | 0.49 × 0.18 × 0.08 mm |
F(000) = 2798 |
Bruker SMART APEXII CCD area-detector diffractometer | 9135 independent reflections |
Radiation source: fine-focus sealed tube | 7444 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.055 |
ω scans | θmax = 28.0°, θmin = 1.6° |
Absorption correction: multi-scan (APEX2; Bruker, 2005) | h = −33→33 |
Tmin = 0.536, Tmax = 0.892 | k = −33→33 |
64426 measured reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.063 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.198 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.12P)2 + 36P] where P = (Fo2 + 2Fc2)/3 |
9135 reflections | (Δ/σ)max = 0.001 |
509 parameters | Δρmax = 4.81 e Å−3 |
18 restraints | Δρmin = −2.19 e Å−3 |
(C4H12N2)3[Nd(C7H3NO4)3]2·15.33H2O | Z = 6 |
Mr = 915.24 | Mo Kα radiation |
Trigonal, P3 | µ = 1.46 mm−1 |
a = 25.5045 (9) Å | T = 100 K |
c = 10.0984 (7) Å | 0.49 × 0.18 × 0.08 mm |
V = 5688.7 (5) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 9135 independent reflections |
Absorption correction: multi-scan (APEX2; Bruker, 2005) | 7444 reflections with I > 2σ(I) |
Tmin = 0.536, Tmax = 0.892 | Rint = 0.055 |
64426 measured reflections |
R[F2 > 2σ(F2)] = 0.063 | 18 restraints |
wR(F2) = 0.198 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.12P)2 + 36P] where P = (Fo2 + 2Fc2)/3 |
9135 reflections | Δρmax = 4.81 e Å−3 |
509 parameters | Δρmin = −2.19 e Å−3 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Nd1 | 0.331570 (11) | −0.005899 (11) | 0.42662 (3) | 0.01072 (12) | |
O1 | 0.38216 (18) | −0.03403 (16) | 0.5997 (4) | 0.0180 (8) | |
O2 | 0.46277 (18) | −0.01274 (17) | 0.7241 (4) | 0.0169 (8) | |
O3 | 0.38330 (17) | 0.07347 (16) | 0.2577 (4) | 0.0148 (7) | |
O4 | 0.46472 (18) | 0.14173 (18) | 0.1487 (4) | 0.0186 (8) | |
O5 | 0.36067 (18) | 0.07296 (17) | 0.5999 (4) | 0.0172 (8) | |
O6 | 0.3421 (2) | 0.13558 (18) | 0.7208 (4) | 0.0222 (9) | |
O7 | 0.25222 (18) | −0.03294 (16) | 0.2577 (4) | 0.0165 (8) | |
O8 | 0.1863 (2) | −0.0172 (2) | 0.1468 (4) | 0.0303 (11) | |
O9 | 0.25092 (18) | −0.05731 (17) | 0.5959 (4) | 0.0178 (8) | |
O10 | 0.1930 (2) | −0.13711 (18) | 0.7233 (4) | 0.0234 (9) | |
O11 | 0.36004 (17) | −0.05794 (17) | 0.2571 (4) | 0.0162 (7) | |
O12 | 0.3501 (2) | −0.13946 (19) | 0.1546 (4) | 0.0297 (10) | |
N1 | 0.4476 (2) | 0.05714 (18) | 0.4369 (4) | 0.0114 (8) | |
N2 | 0.2714 (2) | 0.05001 (18) | 0.4347 (4) | 0.0133 (8) | |
N3 | 0.27787 (19) | −0.12230 (19) | 0.4359 (4) | 0.0126 (8) | |
C1 | 0.4768 (2) | 0.0497 (2) | 0.5382 (5) | 0.0132 (9) | |
C2 | 0.5381 (2) | 0.0882 (2) | 0.5601 (5) | 0.0158 (10) | |
H2A | 0.5577 | 0.0822 | 0.6338 | 0.019* | |
C3 | 0.5706 (3) | 0.1360 (3) | 0.4715 (6) | 0.0195 (11) | |
H3A | 0.6125 | 0.1633 | 0.4843 | 0.023* | |
C4 | 0.5401 (2) | 0.1427 (2) | 0.3642 (5) | 0.0170 (10) | |
H4A | 0.5610 | 0.1741 | 0.3013 | 0.020* | |
C5 | 0.4785 (2) | 0.1026 (2) | 0.3516 (5) | 0.0126 (9) | |
C6 | 0.4374 (3) | −0.0035 (2) | 0.6287 (5) | 0.0144 (10) | |
C7 | 0.4391 (2) | 0.1062 (2) | 0.2437 (5) | 0.0126 (9) | |
C8 | 0.2805 (3) | 0.0888 (2) | 0.5331 (5) | 0.0159 (10) | |
C9 | 0.2451 (3) | 0.1149 (3) | 0.5509 (6) | 0.0232 (12) | |
H9A | 0.2520 | 0.1415 | 0.6229 | 0.028* | |
C10 | 0.1985 (3) | 0.1010 (3) | 0.4598 (6) | 0.0268 (13) | |
H10A | 0.1731 | 0.1181 | 0.4688 | 0.032* | |
C11 | 0.1901 (3) | 0.0619 (3) | 0.3566 (6) | 0.0242 (12) | |
H11A | 0.1592 | 0.0523 | 0.2928 | 0.029* | |
C12 | 0.2269 (3) | 0.0370 (2) | 0.3475 (5) | 0.0164 (10) | |
C13 | 0.3317 (3) | 0.1005 (2) | 0.6274 (5) | 0.0160 (10) | |
C14 | 0.2214 (3) | −0.0082 (2) | 0.2421 (5) | 0.0185 (11) | |
C15 | 0.2920 (2) | −0.1530 (2) | 0.3489 (5) | 0.0150 (10) | |
C16 | 0.2680 (3) | −0.2154 (2) | 0.3588 (6) | 0.0207 (11) | |
H16A | 0.2778 | −0.2366 | 0.2954 | 0.025* | |
C17 | 0.2292 (3) | −0.2458 (2) | 0.4636 (6) | 0.0241 (12) | |
H17A | 0.2127 | −0.2882 | 0.4736 | 0.029* | |
C18 | 0.2145 (3) | −0.2137 (2) | 0.5542 (6) | 0.0208 (11) | |
H18A | 0.1881 | −0.2335 | 0.6265 | 0.025* | |
C19 | 0.2398 (2) | −0.1517 (2) | 0.5348 (5) | 0.0145 (10) | |
C20 | 0.3377 (2) | −0.1140 (2) | 0.2444 (5) | 0.0169 (10) | |
C21 | 0.2260 (2) | −0.1127 (2) | 0.6265 (5) | 0.0144 (10) | |
N2S | 0.3770 (2) | 0.1421 (2) | −0.0182 (5) | 0.0184 (9) | |
H3 | 0.4037 | 0.1313 | 0.0164 | 0.022* | |
H4 | 0.3743 | 0.1348 | −0.1079 | 0.022* | |
N3S | 0.2955 (2) | 0.1879 (2) | 0.0138 (5) | 0.0201 (10) | |
H5 | 0.2980 | 0.1953 | 0.1034 | 0.024* | |
H6 | 0.2688 | 0.1984 | −0.0215 | 0.024* | |
C3S | 0.4008 (3) | 0.2077 (2) | 0.0051 (6) | 0.0184 (11) | |
H3SB | 0.4404 | 0.2315 | −0.0397 | 0.022* | |
H3SC | 0.4071 | 0.2163 | 0.1012 | 0.022* | |
C4S | 0.3567 (3) | 0.2264 (3) | −0.0477 (6) | 0.0191 (11) | |
H4SA | 0.3718 | 0.2695 | −0.0268 | 0.023* | |
H4SB | 0.3536 | 0.2216 | −0.1451 | 0.023* | |
C5S | 0.2722 (3) | 0.1220 (3) | −0.0092 (6) | 0.0228 (12) | |
H5SA | 0.2662 | 0.1133 | −0.1053 | 0.027* | |
H5SB | 0.2326 | 0.0980 | 0.0353 | 0.027* | |
C6S | 0.3159 (3) | 0.1037 (2) | 0.0434 (5) | 0.0190 (11) | |
H6SA | 0.3008 | 0.0605 | 0.0229 | 0.023* | |
H6SB | 0.3190 | 0.1086 | 0.1408 | 0.023* | |
N1S | 0.0447 (2) | 0.4816 (2) | 0.9869 (4) | 0.0171 (9) | |
H1 | 0.0448 | 0.4761 | 0.8969 | 0.020* | |
H2 | 0.0726 | 0.4732 | 1.0242 | 0.020* | |
C1S | 0.0629 (2) | 0.5463 (2) | 1.0145 (5) | 0.0172 (10) | |
H1SB | 0.1030 | 0.5733 | 0.9741 | 0.021* | |
H1SC | 0.0666 | 0.5534 | 1.1113 | 0.021* | |
C2S | −0.0168 (3) | 0.4387 (2) | 1.0410 (5) | 0.0176 (11) | |
H2SB | −0.0161 | 0.4417 | 1.1388 | 0.021* | |
H2SC | −0.0283 | 0.3967 | 1.0169 | 0.021* | |
O1W | 0.2187 (3) | 0.2131 (3) | 0.1999 (5) | 0.0417 (13) | |
H7 | 0.2406 | 0.2202 | 0.2684 | 0.063* | |
H8 | 0.1816 | 0.1861 | 0.2057 | 0.063* | |
O2W | 0.0045 (2) | 0.3336 (2) | 0.8678 (6) | 0.0386 (14) | |
H9 | 0.0120 | 0.3551 | 0.7985 | 0.058* | |
H10 | 0.0048 | 0.3013 | 0.8491 | 0.058* | |
O3W | 0.4578 (3) | 0.1242 (3) | −0.1969 (5) | 0.0473 (15) | |
H11 | 0.4346 | 0.1133 | −0.2640 | 0.071* | |
H12 | 0.4951 | 0.1500 | −0.2075 | 0.071* | |
O4W | 0.1237 (3) | 0.4570 (4) | 0.8062 (5) | 0.0565 (18) | |
H13 | 0.1017 | 0.4500 | 0.7380 | 0.085* | |
H14 | 0.1567 | 0.4893 | 0.7897 | 0.085* | |
O5W | 0.4304 (2) | −0.2332 (2) | 0.9394 (5) | 0.0404 (12) | |
H15 | 0.4638 | −0.2041 | 0.9117 | 0.061* | |
H16 | 0.4247 | −0.2273 | 1.0197 | 0.061* | |
O6W | 0.5887 (4) | 0.2126 (4) | 0.7969 (7) | 0.085 (2) | |
H17 | 0.6117 | 0.2483 | 0.7682 | 0.127* | |
H18 | 0.6059 | 0.1919 | 0.8106 | 0.127* | |
O7W | 0.8981 (4) | −0.0019 (4) | 0.9461 (11) | 0.058 (3) | 0.60 |
H19 | 0.8703 | 0.0043 | 0.9172 | 0.086* | 0.60 |
H20 | 0.9281 | 0.0284 | 0.9818 | 0.086* | 0.60 |
O8W | 0.3286 (5) | −0.2430 (5) | 0.8135 (10) | 0.046 (3) | 0.50 |
H21 | 0.3628 | −0.2401 | 0.8281 | 0.069* | 0.50 |
H22 | 0.2989 | −0.2723 | 0.8528 | 0.069* | 0.50 |
O9W | 0.8626 (7) | −0.0465 (7) | 1.1997 (15) | 0.056 (4) | 0.40 |
H23 | 0.8442 | −0.0845 | 1.1867 | 0.084* | 0.40 |
H24 | 0.8733 | −0.0333 | 1.1214 | 0.084* | 0.40 |
O10W | 0.6667 | 0.3333 | 0.6747 (12) | 0.058 (4) | 0.75 |
O11W | 0.0224 (9) | −0.0463 (9) | 0.403 (2) | 0.041 (5) | 0.25 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Nd1 | 0.01785 (17) | 0.00708 (15) | 0.00477 (18) | 0.00439 (11) | −0.00048 (8) | 0.00019 (8) |
O1 | 0.026 (2) | 0.0124 (17) | 0.0108 (18) | 0.0059 (15) | −0.0037 (15) | 0.0012 (13) |
O2 | 0.025 (2) | 0.0203 (19) | 0.0088 (17) | 0.0144 (16) | −0.0007 (14) | 0.0038 (14) |
O3 | 0.0186 (18) | 0.0156 (17) | 0.0116 (18) | 0.0095 (15) | −0.0020 (14) | 0.0033 (14) |
O4 | 0.025 (2) | 0.0221 (19) | 0.0144 (19) | 0.0157 (17) | 0.0053 (15) | 0.0114 (15) |
O5 | 0.024 (2) | 0.0142 (17) | 0.0122 (18) | 0.0089 (16) | −0.0010 (14) | −0.0033 (14) |
O6 | 0.039 (2) | 0.0194 (19) | 0.0120 (19) | 0.0179 (19) | −0.0076 (17) | −0.0075 (15) |
O7 | 0.025 (2) | 0.0135 (17) | 0.0108 (18) | 0.0096 (15) | −0.0037 (14) | −0.0049 (14) |
O8 | 0.054 (3) | 0.027 (2) | 0.020 (2) | 0.028 (2) | −0.024 (2) | −0.0138 (17) |
O9 | 0.025 (2) | 0.0139 (18) | 0.0133 (18) | 0.0089 (16) | 0.0024 (15) | 0.0012 (14) |
O10 | 0.032 (2) | 0.0157 (19) | 0.0132 (19) | 0.0046 (17) | 0.0092 (16) | −0.0001 (15) |
O11 | 0.0204 (18) | 0.0142 (17) | 0.0110 (18) | 0.0064 (15) | 0.0037 (14) | 0.0014 (13) |
O12 | 0.032 (2) | 0.018 (2) | 0.024 (2) | 0.0018 (18) | 0.0131 (18) | −0.0075 (17) |
N1 | 0.019 (2) | 0.0097 (18) | 0.0068 (19) | 0.0084 (16) | 0.0011 (15) | 0.0001 (15) |
N2 | 0.022 (2) | 0.0080 (18) | 0.009 (2) | 0.0064 (17) | −0.0020 (16) | −0.0013 (15) |
N3 | 0.016 (2) | 0.0105 (19) | 0.008 (2) | 0.0038 (16) | −0.0018 (15) | −0.0013 (15) |
C1 | 0.024 (3) | 0.013 (2) | 0.005 (2) | 0.011 (2) | 0.0002 (18) | −0.0009 (17) |
C2 | 0.019 (2) | 0.019 (2) | 0.009 (2) | 0.010 (2) | −0.0007 (19) | 0.0010 (19) |
C3 | 0.018 (3) | 0.023 (3) | 0.015 (3) | 0.008 (2) | −0.001 (2) | 0.004 (2) |
C4 | 0.021 (3) | 0.016 (2) | 0.015 (3) | 0.010 (2) | 0.001 (2) | 0.0059 (19) |
C5 | 0.022 (3) | 0.011 (2) | 0.009 (2) | 0.011 (2) | 0.0009 (18) | 0.0000 (17) |
C6 | 0.025 (3) | 0.012 (2) | 0.006 (2) | 0.009 (2) | 0.0001 (19) | 0.0001 (17) |
C7 | 0.027 (3) | 0.015 (2) | 0.003 (2) | 0.016 (2) | 0.0022 (18) | 0.0025 (17) |
C8 | 0.027 (3) | 0.011 (2) | 0.007 (2) | 0.007 (2) | −0.0030 (19) | −0.0007 (18) |
C9 | 0.035 (3) | 0.027 (3) | 0.014 (3) | 0.020 (3) | −0.003 (2) | −0.009 (2) |
C10 | 0.035 (3) | 0.031 (3) | 0.021 (3) | 0.022 (3) | −0.006 (2) | −0.009 (2) |
C11 | 0.029 (3) | 0.026 (3) | 0.022 (3) | 0.017 (3) | −0.010 (2) | −0.008 (2) |
C12 | 0.026 (3) | 0.011 (2) | 0.010 (2) | 0.008 (2) | −0.001 (2) | −0.0009 (18) |
C13 | 0.029 (3) | 0.008 (2) | 0.009 (2) | 0.008 (2) | −0.002 (2) | −0.0015 (17) |
C14 | 0.035 (3) | 0.012 (2) | 0.007 (2) | 0.010 (2) | −0.005 (2) | −0.0012 (18) |
C15 | 0.013 (2) | 0.014 (2) | 0.013 (2) | 0.0029 (19) | −0.0017 (18) | −0.0048 (18) |
C16 | 0.023 (3) | 0.012 (2) | 0.021 (3) | 0.004 (2) | 0.003 (2) | −0.006 (2) |
C17 | 0.029 (3) | 0.009 (2) | 0.025 (3) | 0.003 (2) | 0.002 (2) | −0.003 (2) |
C18 | 0.024 (3) | 0.012 (2) | 0.015 (3) | 0.000 (2) | 0.005 (2) | 0.0006 (19) |
C19 | 0.016 (2) | 0.011 (2) | 0.010 (2) | 0.0024 (19) | −0.0008 (18) | −0.0023 (18) |
C20 | 0.017 (2) | 0.015 (2) | 0.009 (2) | 0.002 (2) | −0.0007 (19) | −0.0041 (19) |
C21 | 0.019 (2) | 0.014 (2) | 0.006 (2) | 0.005 (2) | 0.0010 (18) | −0.0004 (18) |
N2S | 0.031 (3) | 0.023 (2) | 0.012 (2) | 0.022 (2) | −0.0039 (18) | −0.0012 (17) |
N3S | 0.029 (3) | 0.029 (3) | 0.013 (2) | 0.023 (2) | −0.0060 (18) | 0.0002 (18) |
C3S | 0.024 (3) | 0.021 (3) | 0.015 (3) | 0.015 (2) | −0.004 (2) | 0.000 (2) |
C4S | 0.028 (3) | 0.023 (3) | 0.015 (3) | 0.019 (2) | −0.005 (2) | 0.000 (2) |
C5S | 0.027 (3) | 0.028 (3) | 0.015 (3) | 0.015 (3) | −0.007 (2) | 0.001 (2) |
C6S | 0.032 (3) | 0.017 (3) | 0.011 (2) | 0.015 (2) | −0.005 (2) | 0.0008 (19) |
N1S | 0.021 (2) | 0.021 (2) | 0.010 (2) | 0.0104 (19) | −0.0030 (17) | 0.0002 (17) |
C1S | 0.021 (3) | 0.014 (2) | 0.012 (2) | 0.005 (2) | −0.0055 (19) | −0.0031 (18) |
C2S | 0.025 (3) | 0.015 (2) | 0.011 (2) | 0.008 (2) | −0.003 (2) | −0.0010 (19) |
O1W | 0.050 (3) | 0.074 (4) | 0.023 (2) | 0.047 (3) | 0.001 (2) | 0.008 (2) |
O2W | 0.055 (3) | 0.063 (4) | 0.015 (3) | 0.042 (3) | 0.0003 (19) | 0.0022 (19) |
O3W | 0.071 (4) | 0.084 (4) | 0.018 (2) | 0.063 (4) | 0.000 (2) | 0.002 (3) |
O4W | 0.064 (4) | 0.115 (6) | 0.027 (3) | 0.072 (4) | −0.004 (3) | −0.002 (3) |
O5W | 0.039 (3) | 0.031 (3) | 0.042 (3) | 0.011 (2) | 0.017 (2) | 0.009 (2) |
O6W | 0.103 (6) | 0.109 (7) | 0.049 (4) | 0.058 (5) | 0.001 (4) | −0.016 (4) |
O7W | 0.042 (5) | 0.038 (5) | 0.091 (8) | 0.020 (4) | −0.022 (5) | 0.005 (5) |
O8W | 0.030 (4) | 0.049 (4) | 0.043 (4) | 0.007 (3) | −0.001 (3) | 0.021 (3) |
O9W | 0.064 (6) | 0.063 (6) | 0.045 (5) | 0.034 (4) | −0.014 (4) | 0.003 (4) |
O10W | 0.076 (6) | 0.076 (6) | 0.022 (6) | 0.038 (3) | 0.000 | 0.000 |
O11W | 0.041 (6) | 0.041 (6) | 0.042 (6) | 0.023 (5) | 0.001 (4) | −0.002 (4) |
Nd1—O3 | 2.465 (4) | C17—H17A | 0.9500 |
Nd1—O7 | 2.467 (4) | C18—C19 | 1.390 (7) |
Nd1—O5 | 2.483 (4) | C18—H18A | 0.9500 |
Nd1—O1 | 2.482 (4) | C19—C21 | 1.524 (7) |
Nd1—O9 | 2.485 (4) | N2S—C3S | 1.487 (7) |
Nd1—O11 | 2.487 (4) | N2S—C6S | 1.501 (8) |
Nd1—N2 | 2.565 (4) | N2S—H3 | 0.9200 |
Nd1—N1 | 2.568 (4) | N2S—H4 | 0.9200 |
Nd1—N3 | 2.575 (4) | N3S—C5S | 1.495 (8) |
O1—C6 | 1.258 (7) | N3S—C4S | 1.501 (8) |
O2—C6 | 1.246 (6) | N3S—H5 | 0.9200 |
O3—C7 | 1.247 (7) | N3S—H6 | 0.9200 |
O4—C7 | 1.255 (6) | C3S—C4S | 1.521 (7) |
O5—C13 | 1.278 (7) | C3S—H3SB | 0.9900 |
O6—C13 | 1.235 (6) | C3S—H3SC | 0.9900 |
O7—C14 | 1.240 (7) | C4S—H4SA | 0.9900 |
O8—C14 | 1.254 (7) | C4S—H4SB | 0.9900 |
O9—C21 | 1.263 (6) | C5S—C6S | 1.503 (8) |
O10—C21 | 1.236 (6) | C5S—H5SA | 0.9900 |
O11—C20 | 1.254 (6) | C5S—H5SB | 0.9900 |
O12—C20 | 1.245 (7) | C6S—H6SA | 0.9900 |
N1—C1 | 1.333 (6) | C6S—H6SB | 0.9900 |
N1—C5 | 1.340 (6) | N1S—C2S | 1.497 (7) |
N2—C8 | 1.338 (6) | N1S—C1S | 1.499 (7) |
N2—C12 | 1.341 (7) | N1S—H1 | 0.9200 |
N3—C19 | 1.332 (7) | N1S—H2 | 0.9200 |
N3—C15 | 1.340 (7) | C1S—C2Si | 1.515 (8) |
C1—C2 | 1.386 (7) | C1S—H1SB | 0.9900 |
C1—C6 | 1.524 (7) | C1S—H1SC | 0.9900 |
C2—C3 | 1.401 (7) | C2S—C1Si | 1.515 (8) |
C2—H2A | 0.9500 | C2S—H2SB | 0.9900 |
C3—C4 | 1.393 (7) | C2S—H2SC | 0.9900 |
C3—H3A | 0.9500 | O1W—H7 | 0.8499 |
C4—C5 | 1.386 (7) | O1W—H8 | 0.8500 |
C4—H4A | 0.9500 | O2W—H9 | 0.8501 |
C5—C7 | 1.516 (7) | O2W—H10 | 0.8498 |
C7—O4 | 1.255 (6) | O3W—H11 | 0.8500 |
C8—C9 | 1.375 (8) | O3W—H12 | 0.8501 |
C8—C13 | 1.521 (7) | O4W—H13 | 0.8500 |
C9—C10 | 1.401 (8) | O4W—H14 | 0.8498 |
C9—H9A | 0.9500 | O5W—H15 | 0.8500 |
C10—C11 | 1.383 (8) | O5W—H16 | 0.8502 |
C10—H10A | 0.9500 | O6W—H17 | 0.8499 |
C11—C12 | 1.374 (8) | O6W—H18 | 0.8500 |
C11—H11A | 0.9500 | O7W—H19 | 0.8503 |
C12—C14 | 1.523 (7) | O7W—H20 | 0.8494 |
C15—C16 | 1.393 (7) | O8W—H21 | 0.8501 |
C15—C20 | 1.517 (7) | O8W—H22 | 0.8500 |
C16—C17 | 1.390 (8) | O9W—H23 | 0.8500 |
C16—H16A | 0.9500 | O9W—H24 | 0.8499 |
C17—C18 | 1.398 (8) | ||
O3—Nd1—O7 | 77.20 (13) | O6—C13—C8 | 118.2 (5) |
O3—Nd1—O5 | 90.11 (12) | O5—C13—C8 | 115.6 (4) |
O7—Nd1—O5 | 125.79 (12) | O7—C14—O8 | 125.4 (5) |
O3—Nd1—O1 | 125.64 (12) | O7—C14—C12 | 117.1 (5) |
O7—Nd1—O1 | 151.47 (12) | O8—C14—C12 | 117.6 (5) |
O5—Nd1—O1 | 75.51 (13) | N3—C15—C16 | 121.8 (5) |
O3—Nd1—O9 | 150.59 (12) | N3—C15—C20 | 114.5 (4) |
O7—Nd1—O9 | 88.93 (13) | C16—C15—C20 | 123.6 (5) |
O5—Nd1—O9 | 77.05 (13) | C17—C16—C15 | 118.3 (5) |
O1—Nd1—O9 | 77.04 (13) | C17—C16—H16A | 120.8 |
O3—Nd1—O11 | 77.45 (12) | C15—C16—H16A | 120.8 |
O7—Nd1—O11 | 78.02 (13) | C16—C17—C18 | 119.8 (5) |
O5—Nd1—O11 | 150.31 (13) | C16—C17—H17A | 120.1 |
O1—Nd1—O11 | 89.88 (13) | C18—C17—H17A | 120.1 |
O9—Nd1—O11 | 125.28 (12) | C19—C18—C17 | 117.8 (5) |
O3—Nd1—N2 | 77.80 (13) | C19—C18—H18A | 121.1 |
O7—Nd1—N2 | 62.76 (13) | C17—C18—H18A | 121.1 |
O5—Nd1—N2 | 63.06 (13) | N3—C19—C18 | 122.6 (5) |
O1—Nd1—N2 | 132.85 (13) | N3—C19—C21 | 115.4 (4) |
O9—Nd1—N2 | 72.79 (13) | C18—C19—C21 | 122.0 (5) |
O11—Nd1—N2 | 137.21 (13) | O12—C20—O11 | 125.4 (5) |
O3—Nd1—N1 | 62.48 (12) | O12—C20—C15 | 118.5 (5) |
O7—Nd1—N1 | 136.93 (13) | O11—C20—C15 | 116.0 (5) |
O5—Nd1—N1 | 71.35 (13) | O10—C21—O9 | 126.3 (5) |
O1—Nd1—N1 | 63.23 (13) | O10—C21—C19 | 118.2 (5) |
O9—Nd1—N1 | 133.88 (13) | O9—C21—C19 | 115.5 (4) |
O11—Nd1—N1 | 79.02 (13) | C3S—N2S—C6S | 112.1 (4) |
N2—Nd1—N1 | 118.22 (12) | C3S—N2S—H3 | 109.2 |
O3—Nd1—N3 | 136.85 (13) | C6S—N2S—H3 | 109.2 |
O7—Nd1—N3 | 79.27 (13) | C3S—N2S—H4 | 109.2 |
O5—Nd1—N3 | 132.81 (13) | C6S—N2S—H4 | 109.2 |
O1—Nd1—N3 | 72.23 (13) | H3—N2S—H4 | 107.9 |
O9—Nd1—N3 | 62.87 (13) | C5S—N3S—C4S | 111.7 (4) |
O11—Nd1—N3 | 62.53 (13) | C5S—N3S—H5 | 109.3 |
N2—Nd1—N3 | 121.23 (12) | C4S—N3S—H5 | 109.3 |
N1—Nd1—N3 | 120.15 (12) | C5S—N3S—H6 | 109.3 |
C6—O1—Nd1 | 124.6 (3) | C4S—N3S—H6 | 109.3 |
C7—O3—Nd1 | 126.3 (3) | H5—N3S—H6 | 107.9 |
C13—O5—Nd1 | 125.3 (3) | N2S—C3S—C4S | 110.3 (4) |
C14—O7—Nd1 | 125.8 (3) | N2S—C3S—H3SB | 109.6 |
C21—O9—Nd1 | 125.4 (3) | C4S—C3S—H3SB | 109.6 |
C20—O11—Nd1 | 126.3 (3) | N2S—C3S—H3SC | 109.6 |
C1—N1—C5 | 119.2 (5) | C4S—C3S—H3SC | 109.6 |
C1—N1—Nd1 | 119.5 (3) | H3SB—C3S—H3SC | 108.1 |
C5—N1—Nd1 | 120.7 (3) | N3S—C4S—C3S | 109.9 (4) |
C8—N2—C12 | 118.8 (5) | N3S—C4S—H4SA | 109.7 |
C8—N2—Nd1 | 120.3 (3) | C3S—C4S—H4SA | 109.7 |
C12—N2—Nd1 | 120.7 (3) | N3S—C4S—H4SB | 109.7 |
C19—N3—C15 | 119.7 (4) | C3S—C4S—H4SB | 109.7 |
C19—N3—Nd1 | 119.6 (3) | H4SA—C4S—H4SB | 108.2 |
C15—N3—Nd1 | 120.4 (3) | N3S—C5S—C6S | 110.8 (5) |
N1—C1—C2 | 122.3 (5) | N3S—C5S—H5SA | 109.5 |
N1—C1—C6 | 114.9 (5) | C6S—C5S—H5SA | 109.5 |
C2—C1—C6 | 122.8 (5) | N3S—C5S—H5SB | 109.5 |
C1—C2—C3 | 118.7 (5) | C6S—C5S—H5SB | 109.5 |
C1—C2—H2A | 120.6 | H5SA—C5S—H5SB | 108.1 |
C3—C2—H2A | 120.6 | C5S—C6S—N2S | 109.9 (4) |
C4—C3—C2 | 118.7 (5) | C5S—C6S—H6SA | 109.7 |
C4—C3—H3A | 120.6 | N2S—C6S—H6SA | 109.7 |
C2—C3—H3A | 120.6 | C5S—C6S—H6SB | 109.7 |
C5—C4—C3 | 118.5 (5) | N2S—C6S—H6SB | 109.7 |
C5—C4—H4A | 120.8 | H6SA—C6S—H6SB | 108.2 |
C3—C4—H4A | 120.8 | C2S—N1S—C1S | 111.8 (4) |
N1—C5—C4 | 122.6 (5) | C2S—N1S—H1 | 109.3 |
N1—C5—C7 | 113.2 (4) | C1S—N1S—H1 | 109.3 |
C4—C5—C7 | 124.2 (5) | C2S—N1S—H2 | 109.3 |
O2—C6—O1 | 126.1 (5) | C1S—N1S—H2 | 109.3 |
O2—C6—C1 | 117.3 (5) | H1—N1S—H2 | 107.9 |
O1—C6—C1 | 116.6 (4) | N1S—C1S—C2Si | 110.9 (4) |
O3—C7—O4 | 125.3 (5) | N1S—C1S—H1SB | 109.5 |
O3—C7—O4 | 125.3 (5) | C2Si—C1S—H1SB | 109.5 |
O3—C7—C5 | 116.6 (4) | N1S—C1S—H1SC | 109.5 |
O4—C7—C5 | 118.1 (5) | C2Si—C1S—H1SC | 109.5 |
O4—C7—C5 | 118.1 (5) | H1SB—C1S—H1SC | 108.0 |
N2—C8—C9 | 122.9 (5) | N1S—C2S—C1Si | 110.0 (4) |
N2—C8—C13 | 115.0 (5) | N1S—C2S—H2SB | 109.7 |
C9—C8—C13 | 122.1 (5) | C1Si—C2S—H2SB | 109.7 |
C8—C9—C10 | 118.1 (5) | N1S—C2S—H2SC | 109.7 |
C8—C9—H9A | 120.9 | C1Si—C2S—H2SC | 109.7 |
C10—C9—H9A | 120.9 | H2SB—C2S—H2SC | 108.2 |
C11—C10—C9 | 118.8 (6) | H7—O1W—H8 | 117.6 |
C11—C10—H10A | 120.6 | H9—O2W—H10 | 109.6 |
C9—C10—H10A | 120.6 | H11—O3W—H12 | 118.7 |
C12—C11—C10 | 119.2 (5) | H13—O4W—H14 | 105.9 |
C12—C11—H11A | 120.4 | H15—O5W—H16 | 110.1 |
C10—C11—H11A | 120.4 | H17—O6W—H18 | 115.1 |
N2—C12—C11 | 122.1 (5) | H19—O7W—H20 | 115.6 |
N2—C12—C14 | 113.1 (5) | H21—O8W—H22 | 114.8 |
C11—C12—C14 | 124.8 (5) | H23—O9W—H24 | 101.1 |
O6—C13—O5 | 126.2 (5) | ||
O3—Nd1—O1—C6 | 12.5 (5) | N2—Nd1—N3—C15 | 132.0 (4) |
O7—Nd1—O1—C6 | 150.9 (4) | N1—Nd1—N3—C15 | −55.3 (4) |
O5—Nd1—O1—C6 | −66.9 (4) | C5—N1—C1—C2 | 1.3 (7) |
O9—Nd1—O1—C6 | −146.7 (4) | Nd1—N1—C1—C2 | −170.3 (4) |
O11—Nd1—O1—C6 | 86.9 (4) | C5—N1—C1—C6 | −179.7 (4) |
N2—Nd1—O1—C6 | −95.5 (4) | Nd1—N1—C1—C6 | 8.7 (5) |
N1—Nd1—O1—C6 | 9.2 (4) | N1—C1—C2—C3 | −1.0 (8) |
N3—Nd1—O1—C6 | 148.0 (4) | C6—C1—C2—C3 | −179.8 (5) |
O7—Nd1—O3—C7 | −160.7 (4) | C1—C2—C3—C4 | −0.5 (8) |
O5—Nd1—O3—C7 | 72.5 (4) | C2—C3—C4—C5 | 1.5 (8) |
O1—Nd1—O3—C7 | 0.4 (5) | C1—N1—C5—C4 | −0.2 (7) |
O9—Nd1—O3—C7 | 135.6 (4) | Nd1—N1—C5—C4 | 171.3 (4) |
O11—Nd1—O3—C7 | −80.3 (4) | C1—N1—C5—C7 | −178.7 (4) |
N2—Nd1—O3—C7 | 134.9 (4) | Nd1—N1—C5—C7 | −7.3 (5) |
N1—Nd1—O3—C7 | 3.7 (4) | C3—C4—C5—N1 | −1.2 (8) |
N3—Nd1—O3—C7 | −102.1 (4) | C3—C4—C5—C7 | 177.2 (5) |
O3—Nd1—O5—C13 | 84.2 (4) | Nd1—O1—C6—O2 | 171.7 (4) |
O7—Nd1—O5—C13 | 9.9 (5) | Nd1—O1—C6—C1 | −8.4 (6) |
O1—Nd1—O5—C13 | −148.9 (4) | N1—C1—C6—O2 | 179.2 (4) |
O9—Nd1—O5—C13 | −69.1 (4) | C2—C1—C6—O2 | −1.8 (7) |
O11—Nd1—O5—C13 | 148.4 (4) | N1—C1—C6—O1 | −0.7 (7) |
N2—Nd1—O5—C13 | 7.9 (4) | C2—C1—C6—O1 | 178.3 (5) |
N1—Nd1—O5—C13 | 144.9 (4) | Nd1—O3—C7—O4 | 171.8 (4) |
N3—Nd1—O5—C13 | −100.8 (4) | Nd1—O3—C7—O4 | 171.8 (4) |
O3—Nd1—O7—C14 | −78.3 (5) | Nd1—O3—C7—C5 | −8.8 (6) |
O5—Nd1—O7—C14 | 2.5 (5) | O4—O4—C7—O3 | 0.00 (15) |
O1—Nd1—O7—C14 | 135.3 (4) | O4—O4—C7—C5 | 0.0 (3) |
O9—Nd1—O7—C14 | 75.6 (4) | N1—C5—C7—O3 | 10.1 (6) |
O11—Nd1—O7—C14 | −157.9 (5) | C4—C5—C7—O3 | −168.4 (5) |
N2—Nd1—O7—C14 | 4.5 (4) | N1—C5—C7—O4 | −170.4 (4) |
N1—Nd1—O7—C14 | −98.7 (5) | C4—C5—C7—O4 | 11.1 (7) |
N3—Nd1—O7—C14 | 138.2 (5) | N1—C5—C7—O4 | −170.4 (4) |
O3—Nd1—O9—C21 | 149.9 (4) | C4—C5—C7—O4 | 11.1 (7) |
O7—Nd1—O9—C21 | 88.9 (4) | C12—N2—C8—C9 | 1.7 (8) |
O5—Nd1—O9—C21 | −143.9 (4) | Nd1—N2—C8—C9 | −172.5 (4) |
O1—Nd1—O9—C21 | −66.1 (4) | C12—N2—C8—C13 | 179.7 (5) |
O11—Nd1—O9—C21 | 14.4 (5) | Nd1—N2—C8—C13 | 5.4 (6) |
N2—Nd1—O9—C21 | 150.6 (4) | N2—C8—C9—C10 | −1.5 (9) |
N1—Nd1—O9—C21 | −96.5 (4) | C13—C8—C9—C10 | −179.3 (5) |
N3—Nd1—O9—C21 | 10.4 (4) | C8—C9—C10—C11 | 0.1 (10) |
O3—Nd1—O11—C20 | −161.4 (5) | C9—C10—C11—C12 | 1.0 (10) |
O7—Nd1—O11—C20 | −82.1 (5) | C8—N2—C12—C11 | −0.6 (8) |
O5—Nd1—O11—C20 | 131.3 (4) | Nd1—N2—C12—C11 | 173.7 (4) |
O1—Nd1—O11—C20 | 71.9 (4) | C8—N2—C12—C14 | −179.4 (5) |
O9—Nd1—O11—C20 | −2.1 (5) | Nd1—N2—C12—C14 | −5.1 (6) |
N2—Nd1—O11—C20 | −105.4 (4) | C10—C11—C12—N2 | −0.8 (9) |
N1—Nd1—O11—C20 | 134.6 (4) | C10—C11—C12—C14 | 177.8 (6) |
N3—Nd1—O11—C20 | 1.9 (4) | Nd1—O5—C13—O6 | 172.8 (4) |
O3—Nd1—N1—C1 | 174.1 (4) | Nd1—O5—C13—C8 | −8.2 (6) |
O7—Nd1—N1—C1 | −163.3 (3) | N2—C8—C13—O6 | −179.5 (5) |
O5—Nd1—N1—C1 | 73.8 (4) | C9—C8—C13—O6 | −1.5 (8) |
O1—Nd1—N1—C1 | −9.0 (3) | N2—C8—C13—O5 | 1.4 (7) |
O9—Nd1—N1—C1 | 24.6 (4) | C9—C8—C13—O5 | 179.4 (5) |
O11—Nd1—N1—C1 | −104.4 (4) | Nd1—O7—C14—O8 | 171.0 (5) |
N2—Nd1—N1—C1 | 117.5 (3) | Nd1—O7—C14—C12 | −8.7 (7) |
N3—Nd1—N1—C1 | −55.5 (4) | N2—C12—C14—O7 | 8.7 (7) |
O3—Nd1—N1—C5 | 2.7 (3) | C11—C12—C14—O7 | −170.1 (6) |
O7—Nd1—N1—C5 | 25.3 (4) | N2—C12—C14—O8 | −171.1 (5) |
O5—Nd1—N1—C5 | −97.6 (4) | C11—C12—C14—O8 | 10.1 (9) |
O1—Nd1—N1—C5 | 179.6 (4) | C19—N3—C15—C16 | −0.1 (8) |
O9—Nd1—N1—C5 | −146.8 (3) | Nd1—N3—C15—C16 | 173.9 (4) |
O11—Nd1—N1—C5 | 84.1 (4) | C19—N3—C15—C20 | −177.7 (5) |
N2—Nd1—N1—C5 | −53.9 (4) | Nd1—N3—C15—C20 | −3.6 (6) |
N3—Nd1—N1—C5 | 133.1 (3) | N3—C15—C16—C17 | −1.1 (9) |
O3—Nd1—N2—C8 | −103.0 (4) | C20—C15—C16—C17 | 176.2 (5) |
O7—Nd1—N2—C8 | 175.3 (4) | C15—C16—C17—C18 | 1.1 (9) |
O5—Nd1—N2—C8 | −6.5 (4) | C16—C17—C18—C19 | 0.0 (9) |
O1—Nd1—N2—C8 | 24.8 (5) | C15—N3—C19—C18 | 1.4 (8) |
O9—Nd1—N2—C8 | 77.4 (4) | Nd1—N3—C19—C18 | −172.7 (4) |
O11—Nd1—N2—C8 | −158.9 (3) | C15—N3—C19—C21 | −179.0 (5) |
N1—Nd1—N2—C8 | −53.7 (4) | Nd1—N3—C19—C21 | 6.9 (6) |
N3—Nd1—N2—C8 | 119.1 (4) | C17—C18—C19—N3 | −1.3 (9) |
O3—Nd1—N2—C12 | 82.9 (4) | C17—C18—C19—C21 | 179.1 (5) |
O7—Nd1—N2—C12 | 1.1 (4) | Nd1—O11—C20—O12 | 175.9 (4) |
O5—Nd1—N2—C12 | 179.3 (4) | Nd1—O11—C20—C15 | −4.4 (7) |
O1—Nd1—N2—C12 | −149.4 (4) | N3—C15—C20—O12 | −175.2 (5) |
O9—Nd1—N2—C12 | −96.8 (4) | C16—C15—C20—O12 | 7.3 (8) |
O11—Nd1—N2—C12 | 27.0 (5) | N3—C15—C20—O11 | 5.1 (7) |
N1—Nd1—N2—C12 | 132.1 (4) | C16—C15—C20—O11 | −172.4 (5) |
N3—Nd1—N2—C12 | −55.0 (4) | Nd1—O9—C21—O10 | 168.0 (4) |
O3—Nd1—N3—C19 | −160.6 (3) | Nd1—O9—C21—C19 | −10.9 (6) |
O7—Nd1—N3—C19 | −102.7 (4) | N3—C19—C21—O10 | −177.0 (5) |
O5—Nd1—N3—C19 | 26.8 (5) | C18—C19—C21—O10 | 2.7 (8) |
O1—Nd1—N3—C19 | 75.9 (4) | N3—C19—C21—O9 | 2.0 (7) |
O9—Nd1—N3—C19 | −8.4 (4) | C18—C19—C21—O9 | −178.4 (5) |
O11—Nd1—N3—C19 | 175.3 (4) | C6S—N2S—C3S—C4S | −57.2 (6) |
N2—Nd1—N3—C19 | −54.0 (4) | C5S—N3S—C4S—C3S | −56.4 (6) |
N1—Nd1—N3—C19 | 118.7 (4) | N2S—C3S—C4S—N3S | 55.9 (6) |
O3—Nd1—N3—C15 | 25.4 (5) | C4S—N3S—C5S—C6S | 57.1 (6) |
O7—Nd1—N3—C15 | 83.2 (4) | N3S—C5S—C6S—N2S | −56.2 (6) |
O5—Nd1—N3—C15 | −147.3 (4) | C3S—N2S—C6S—C5S | 57.2 (6) |
O1—Nd1—N3—C15 | −98.2 (4) | C2S—N1S—C1S—C2Si | −56.8 (6) |
O9—Nd1—N3—C15 | 177.6 (4) | C1S—N1S—C2S—C1Si | 56.3 (6) |
O11—Nd1—N3—C15 | 1.3 (4) |
Symmetry code: (i) −x, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2S—H3···O4 | 0.92 | 1.97 | 2.804 (6) | 151 |
N2S—H4···O6ii | 0.92 | 1.92 | 2.760 (6) | 151 |
N3S—H5···O10iii | 0.92 | 1.95 | 2.780 (6) | 150 |
N3S—H6···O8iv | 0.92 | 1.99 | 2.836 (6) | 153 |
N1S—H1···O2v | 0.92 | 1.92 | 2.758 (6) | 150 |
N1S—H2···O12vi | 0.92 | 2.03 | 2.874 (6) | 153 |
O1W—H7···O9iii | 0.85 | 2.03 | 2.863 (7) | 167 |
O1W—H8···O9Wvii | 0.85 | 2.01 | 2.838 (17) | 167 |
O2W—H9···O1v | 0.85 | 2.43 | 3.278 (7) | 180 |
O2W—H10···O1Wiii | 0.85 | 2.17 | 3.024 (8) | 180 |
O3W—H11···O5ii | 0.85 | 2.14 | 2.970 (7) | 167 |
O3W—H12···O6Wii | 0.85 | 2.11 | 2.950 (11) | 171 |
O4W—H13···O1v | 0.85 | 2.05 | 2.878 (7) | 166 |
O4W—H14···O8Wv | 0.85 | 2.17 | 2.985 (14) | 162 |
O5W—H15···O4viii | 0.85 | 1.82 | 2.674 (6) | 180 |
O5W—H16···O6Wix | 0.85 | 1.95 | 2.804 (9) | 179 |
O6W—H17···O10W | 0.85 | 2.13 | 2.972 (10) | 174 |
O6W—H18···O12viii | 0.85 | 2.16 | 3.011 (10) | 180 |
O7W—H19···O8viii | 0.85 | 1.76 | 2.608 (10) | 179 |
O7W—H20···O7Wx | 0.85 | 1.95 | 2.797 (11) | 177 |
O8W—H21···O5W | 0.85 | 1.99 | 2.787 (12) | 156 |
O8W—H22···O5Wxi | 0.85 | 1.87 | 2.723 (11) | 180 |
O9W—H23···O8xii | 0.85 | 2.29 | 3.136 (18) | 179 |
O9W—H24···O7W | 0.85 | 1.92 | 2.77 (2) | 179 |
C3S—H3Sc···O10iii | 0.99 | 2.49 | 3.200 (8) | 129 |
C4S—H4SB···O6ii | 0.99 | 2.47 | 3.179 (8) | 128 |
C4S—H4SB···O7iv | 0.99 | 2.51 | 3.076 (9) | 116 |
C5S—H5SA···O6ii | 0.99 | 2.46 | 3.180 (8) | 129 |
C6S—H6SB···O3 | 0.99 | 2.52 | 3.092 (8) | 116 |
C6S—H6SB···O10iii | 0.99 | 2.45 | 3.169 (7) | 129 |
C1S—H1SC···O2xiii | 0.99 | 2.43 | 3.151 (7) | 129 |
C2S—H2SB···O11vi | 0.99 | 2.55 | 3.112 (8) | 116 |
C2S—H2SB···O2xiii | 0.99 | 2.49 | 3.194 (7) | 128 |
Symmetry codes: (ii) x, y, z−1; (iii) x−y, x, −z+1; (iv) x−y, x, −z; (v) −y, x−y, z; (vi) −y, x−y, z+1; (vii) −x+y+1, −x+1, z−1; (viii) −x+1, −y, −z+1; (ix) −x+1, −y, −z+2; (x) y+1, −x+y+1, −z+2; (xi) −y, x−y−1, z; (xii) −x+y+1, −x, z+1; (xiii) y, −x+y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | (C4H12N2)3[Nd(C7H3NO4)3]2·15.33H2O |
Mr | 915.24 |
Crystal system, space group | Trigonal, P3 |
Temperature (K) | 100 |
a, c (Å) | 25.5045 (9), 10.0984 (7) |
V (Å3) | 5688.7 (5) |
Z | 6 |
Radiation type | Mo Kα |
µ (mm−1) | 1.46 |
Crystal size (mm) | 0.49 × 0.18 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (APEX2; Bruker, 2005) |
Tmin, Tmax | 0.536, 0.892 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 64426, 9135, 7444 |
Rint | 0.055 |
(sin θ/λ)max (Å−1) | 0.661 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.063, 0.198, 1.02 |
No. of reflections | 9135 |
No. of parameters | 509 |
No. of restraints | 18 |
H-atom treatment | H-atom parameters constrained |
w = 1/[σ2(Fo2) + (0.12P)2 + 36P] where P = (Fo2 + 2Fc2)/3 | |
Δρmax, Δρmin (e Å−3) | 4.81, −2.19 |
Computer programs: APEX2 (Bruker, 2005), SHELXTL (Sheldrick, 1998).
Nd1—O3 | 2.465 (4) | Nd1—O11 | 2.487 (4) |
Nd1—O7 | 2.467 (4) | Nd1—N2 | 2.565 (4) |
Nd1—O5 | 2.483 (4) | Nd1—N1 | 2.568 (4) |
Nd1—O1 | 2.482 (4) | Nd1—N3 | 2.575 (4) |
Nd1—O9 | 2.485 (4) | ||
N2—Nd1—N1 | 118.22 (12) | N1—Nd1—N3 | 120.15 (12) |
N2—Nd1—N3 | 121.23 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2S—H3···O4 | 0.920 | 1.966 | 2.804 (6) | 150.63 |
N2S—H4···O6i | 0.920 | 1.919 | 2.760 (6) | 151.00 |
N3S—H5···O10ii | 0.920 | 1.945 | 2.780 (6) | 150.04 |
N3S—H6···O8iii | 0.920 | 1.988 | 2.836 (6) | 152.49 |
N1S—H1···O2iv | 0.920 | 1.924 | 2.758 (6) | 149.74 |
N1S—H2···O12v | 0.920 | 2.026 | 2.874 (6) | 152.58 |
O1W—H7···O9ii | 0.850 | 2.028 | 2.863 (7) | 166.81 |
O1W—H8···O9Wvi | 0.850 | 2.005 | 2.838 (17) | 166.45 |
O2W—H9···O1iv | 0.850 | 2.428 | 3.278 (7) | 179.47 |
O2W—H10···O1Wii | 0.850 | 2.174 | 3.024 (8) | 179.64 |
O3W—H11···O5i | 0.850 | 2.136 | 2.970 (7) | 166.80 |
O3W—H12···O6Wi | 0.850 | 2.107 | 2.950 (11) | 171.40 |
O4W—H13···O1iv | 0.850 | 2.045 | 2.878 (7) | 166.36 |
O4W—H14···O8Wiv | 0.850 | 2.165 | 2.985 (14) | 162.29 |
O5W—H15···O4vii | 0.850 | 1.824 | 2.674 (6) | 179.64 |
O5W—H16···O6Wviii | 0.850 | 1.954 | 2.804 (9) | 178.94 |
O6W—H17···O10W | 0.850 | 2.126 | 2.972 (10) | 173.61 |
O6W—H18···O12vii | 0.850 | 2.161 | 3.011 (10) | 179.91 |
O7W—H19···O8vii | 0.850 | 1.757 | 2.608 (10) | 178.50 |
O7W—H20···O7Wix | 0.849 | 1.948 | 2.797 (11) | 176.74 |
O8W—H21···O5W | 0.850 | 1.991 | 2.787 (12) | 155.54 |
O8W—H22···O5Wx | 0.850 | 1.873 | 2.723 (11) | 179.54 |
O9W—H23···O8xi | 0.850 | 2.287 | 3.136 (18) | 178.51 |
O9W—H24···O7W | 0.850 | 1.915 | 2.765 (20) | 178.84 |
C3S—H3Sc···O10ii | 0.99 | 2.49 | 3.200 (8) | 129 |
C4S—H4SB···O6i | 0.99 | 2.47 | 3.179 (8) | 128 |
C4S—H4SB···O7iii | 0.99 | 2.51 | 3.076 (9) | 116 |
C5S—H5SA···O6i | 0.99 | 2.46 | 3.180 (8) | 129 |
C6S—H6SB···O3 | 0.99 | 2.52 | 3.092 (8) | 116 |
C6S—H6SB···O10ii | 0.99 | 2.45 | 3.169 (7) | 129 |
C1S—H1SC···O2xii | 0.99 | 2.43 | 3.151 (7) | 129 |
C2S—H2SB···O11v | 0.99 | 2.55 | 3.112 (8) | 116 |
C2S—H2SB···O2xii | 0.99 | 2.49 | 3.194 (7) | 128 |
Symmetry codes: (i) x, y, z−1; (ii) x−y, x, −z+1; (iii) x−y, x, −z; (iv) −y, x−y, z; (v) −y, x−y, z+1; (vi) −x+y+1, −x+1, z−1; (vii) −x+1, −y, −z+1; (viii) −x+1, −y, −z+2; (ix) y+1, −x+y+1, −z+2; (x) −y, x−y−1, z; (xi) −x+y+1, −x, z+1; (xii) y, −x+y+1, −z+2. |
References
Aghabozorg, H., Attar Gharamaleki, J., Ghadermazi, M., Ghasemikhah, P. & Soleimannejad, J. (2007). Acta Cryst. E63, m1803–m1804. Web of Science CSD CrossRef IUCr Journals Google Scholar
Aghabozorg, H., Attar Gharamaleki, J., Ghasemikhah, P., Ghadermazi, M. & Soleimannejad, J. (2007). Acta Cryst. E63, m1710–m1711. Web of Science CSD CrossRef IUCr Journals Google Scholar
Aghabozorg, H., Daneshvar, S., Motyeian, E., Ghadermazi, M. & Attar Gharamaleki, J. (2007). Acta Cryst. E63, m2468–m2469. Web of Science CSD CrossRef IUCr Journals Google Scholar
Aghabozorg, H., Ghadermazi, M., Manteghi, F. & Nakhjavan, N. (2006). Z. Anorg. Allg. Chem. 632, 2058–2064. Web of Science CSD CrossRef CAS Google Scholar
Bruker (2005). APEX2. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (1998). SHELXTL. Version 5.10. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Recently, we have defined a plan to prepare water soluble proton transfer compounds as novel self assembled systems that can function as suitable ligands in the synthesis of metal complexes. In this regard, we have reported cases in which proton transfers from pyridine-2,6-dicarboxylic acid, pydcH2, and benzene-1,2,4,5-tetracarboxylicacid, btcH4, to propane-1,3-diamine (pn) and 1,10-phenanthroline, (phen), resulted in the formation of novel self-assembled (pnH2)(pydc).(pydcH2).2.5H2O, (pnH2)2(btc).2H2O and (phenH)4(btcH3)2(btcH2) systems, respectively. The resulting compounds with some remaining sites as electron donors can coordinate to metallic ions (Aghabozorg, Attar Gharamaleki, Ghadermazi et al., 2007; Aghabozorg, Attar Gharamaleki, Ghasemikhah et al., 2007; Aghabozorg, Daneshvar et al., 2007, and references therein).
Here, we report on the synthesis and X-ray crystal structure of the title compound. The molecular structure of the title compound (I) is presented in Fig. 1. Selected bond lengths and angles of the structure (I) are presented in Table 1. Hydrogen bond lengths are given separately in Table 2.
In structure (I), NdIII is coordinated by three (pydc)2– groups as tridentate ligands and a nine coordinated complex results. For balancing the anionic complex, protonated piperazine, (pipzH2)2+, exists. The sum of bond angles, N1—Nd1—N2, N1—Nd1—N3 and N2—Nd1—N3 equals to 359.60 (12)° and indicates that Nd1 is located in the center of N1N2N3 plane. The three O atoms O1, O5 and O9 form a triangle and the other three, O3, O7 and O11 form another triangle around the NdIII. So a distorted tricapped prism polyhedron is proposed.
Moreover, there are uncoordinated water molecules which are involved in the formation of hydrogen bonds. These water molecules form six members cyclic rings with acyclic side chains water clusters (Fig. 2).
A noticeable feature of the title compound is the presence of C—O···π stacking interactions between CO group of carboxylates with aromatic rings of (pydc)2– units. The C—O···π distances (measured to the center of phenyl ring) are 3.134 (5) Å for C6—O2···Cg1 (1 + x, y, z), 3.245 (5) for C21—O10···Cg2 (x, y, z) and 3.255 (5) Å for C13—O6···Cg3, [Cg1, Cg2 and Cg3 are the centroids of N1/C1—C5, N2/C8—C12 and N3/C15—C19 rings, respectively] (Fig. 3).
In the crystal structure, a wide range of non-covalent interactions consisting of hydrogen bonding (of the type O—H···O, N—H···O and C—H···O with D···A ranging from 2.608 (10) to 3.278 (7) Å, ion pairing and C—O···π stacking connect the various components into a supramolecular structure (Table 2, Fig. 4).