organic compounds
1-Benzylimidazolium hexafluorophosphate–1-benzylimidazole (1/1)
aKey Laboratory of Molecular Structure and Materials Performance, College of Chemistry and Life Science, Tianjin Normal University, Tianjin 300387, People's Republic of China, and bState Key Laboratory of Elemento-Organic Chemistry, Nankai University, Tianjin 300071, People's Republic of China
*Correspondence e-mail: tjnulqx@163.com
In the title compound, C10H11N2+·PF6−·C10H10N2, the H atom involved in protonation is disordered equally between the cation and the neutral molecule. The dihedral angle between the phenyl and imidazole rings is 82.6 (2)°. In the there are head-to-tail π–π stacking interactions between imidazole rings; the interplanar separation is 3.295 (1) Å and the centroid–centroid separation is 3.448 (3) Å. In the centrosymmetric anion, two F atoms are disordered over two positions; the refined site-occupancy factors are 0.855 (11) and 0.145 (11).
Related literature
For background to the chemistry of imidazolium compounds, see: Hunter & Sanders (1990); Sundberg & Martin (1974); Kurdziel & Glowiak (2000). For related literature, see: Liu et al. (2003).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2003); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536807061259/wn2226sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536807061259/wn2226Isup2.hkl
A 1,4-dioxane solution (20 ml) of imidazole (1.420 g, 20.8 mmol) was added to a suspension of oil-free sodium hydride (0.500 g, 20.8 mmol) in 1,4-dioxane (20 ml) and stirred for 1 h at 90°C. A 1,4-dioxane (20 ml) solution of benzyl bromide (3.240 g, 19 mmol) was then added dropwise to the above solution. The mixture was stirred for 22 h at 90°C, and a brown solution was obtained. The solvent was removed with a rotary evaporator and H2O (50 ml) was added to the residue. The solution was then extracted with CH2Cl2 (50 ml), and the solution was dried with anhydrous MgSO4. After removing CH2Cl2, 1-benzylimidazole, as a pale yellow liquid was obtained yield: 2.7 g (89.7%).
1-Benzylimidazole (2.000 g, 12.6 mmol) was reacted with hydrochloric acid (8 ml, 6 mol l-1) to afford 1-benzylimidazolium chloride as a pale yellow solid (2.618 g, 94%). NH4PF6 (5.050 g, 31 mmol) was added to a methanol solution (50 ml) of 1-benzylimidazolium chloride (2.000 g, 10.3 mmol). A pale yellow precipitate formed immediately, which was collected by filtration, washed with small portions of methanol, and dried in a vacuum to give 1-benzylimidazolium hexafluoridophosphate as a pale yellow powder (3.3 g, 95%). m.p. 202–204°C. Crystals suitable for X-ray diffraction were obtained by evaporating slowly a CH3OH solution at room temperature.
All H atoms were initially located in a difference Fourier map. They were then placed in geometrically idealized positions and constrained to ride on their parent atoms, with Csp3—H = 0.97 Å, Csp2—H = 0.93 Å and N—H = 0.86 Å and Uiso(H) = 1.2Ueq(C,N). In the centrosymmetric anion, atoms F2 and F3 are disordered over two positions; the refined site occupancy factors are 0.855 (11) and 0.145 (11). Atom H2 is disordered equally between the cation and the neutral molecule.
Data collection: APEX2 (Bruker, 2003); cell
SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C10H11N2+·PF6−·C10H10N2 | F(000) = 476 |
Mr = 462.38 | Dx = 1.492 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 6.6459 (4) Å | Cell parameters from 3167 reflections |
b = 6.9825 (4) Å | θ = 3.1–27.8° |
c = 22.3558 (12) Å | µ = 0.20 mm−1 |
β = 97.109 (1)° | T = 296 K |
V = 1029.45 (10) Å3 | Block, colorless |
Z = 2 | 0.25 × 0.24 × 0.22 mm |
Bruker APEXII CCD area-detector diffractometer | 1820 independent reflections |
Radiation source: fine-focus sealed tube | 1585 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −6→7 |
Tmin = 0.951, Tmax = 0.957 | k = −8→8 |
5057 measured reflections | l = −26→21 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
wR(F2) = 0.116 | w = 1/[σ2(Fo2) + (0.0633P)2 + 0.4527P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
1820 reflections | Δρmax = 0.23 e Å−3 |
162 parameters | Δρmin = −0.46 e Å−3 |
2 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.013 (3) |
C10H11N2+·PF6−·C10H10N2 | V = 1029.45 (10) Å3 |
Mr = 462.38 | Z = 2 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.6459 (4) Å | µ = 0.20 mm−1 |
b = 6.9825 (4) Å | T = 296 K |
c = 22.3558 (12) Å | 0.25 × 0.24 × 0.22 mm |
β = 97.109 (1)° |
Bruker APEXII CCD area-detector diffractometer | 1820 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1585 reflections with I > 2σ(I) |
Tmin = 0.951, Tmax = 0.957 | Rint = 0.014 |
5057 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | 2 restraints |
wR(F2) = 0.116 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.23 e Å−3 |
1820 reflections | Δρmin = −0.46 e Å−3 |
162 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
P1 | 0.5000 | 0.5000 | 0.0000 | 0.0381 (3) | |
F1 | 0.25151 (17) | 0.51481 (17) | 0.00618 (6) | 0.0514 (4) | |
F2 | 0.5364 (5) | 0.4064 (5) | 0.06870 (9) | 0.0695 (10) | 0.855 (11) |
F3 | 0.5370 (4) | 0.7209 (3) | 0.02900 (16) | 0.0629 (9) | 0.855 (11) |
F2' | 0.553 (3) | 0.310 (5) | 0.042 (2) | 0.152 (18) | 0.145 (11) |
F3' | 0.542 (3) | 0.648 (6) | 0.0573 (15) | 0.160 (17) | 0.145 (11) |
N1 | 0.0699 (2) | 0.1368 (2) | 0.09486 (6) | 0.0371 (4) | |
N2 | 0.1897 (3) | −0.1141 (3) | 0.05810 (8) | 0.0527 (5) | |
H2 | 0.2730 | −0.1922 | 0.0444 | 0.063* | 0.50 |
C1 | 0.2320 (3) | 0.0610 (3) | 0.07629 (9) | 0.0445 (5) | |
H1 | 0.3564 | 0.1218 | 0.0761 | 0.053* | |
C2 | −0.0066 (4) | −0.1526 (3) | 0.06429 (9) | 0.0550 (6) | |
H2A | −0.0753 | −0.2664 | 0.0543 | 0.066* | |
C3 | −0.0827 (3) | 0.0043 (3) | 0.08755 (10) | 0.0479 (5) | |
H3 | −0.2141 | 0.0202 | 0.0969 | 0.058* | |
C4 | 0.0549 (4) | 0.3309 (3) | 0.11951 (9) | 0.0549 (6) | |
H4A | −0.0577 | 0.3979 | 0.0969 | 0.066* | |
H4B | 0.1780 | 0.4014 | 0.1152 | 0.066* | |
C5 | 0.0237 (3) | 0.3236 (3) | 0.18532 (9) | 0.0456 (5) | |
C6 | −0.1565 (4) | 0.3843 (3) | 0.20279 (10) | 0.0594 (6) | |
H6 | −0.2584 | 0.4301 | 0.1741 | 0.071* | |
C7 | −0.1878 (4) | 0.3780 (4) | 0.26278 (11) | 0.0674 (7) | |
H7 | −0.3096 | 0.4214 | 0.2743 | 0.081* | |
C8 | −0.0405 (4) | 0.3081 (4) | 0.30527 (10) | 0.0619 (7) | |
H8 | −0.0632 | 0.3011 | 0.3454 | 0.074* | |
C9 | 0.1401 (4) | 0.2487 (3) | 0.28843 (10) | 0.0637 (7) | |
H9 | 0.2413 | 0.2030 | 0.3174 | 0.076* | |
C10 | 0.1734 (4) | 0.2560 (3) | 0.22857 (10) | 0.0566 (6) | |
H10 | 0.2967 | 0.2154 | 0.2174 | 0.068* |
U11 | U22 | U33 | U12 | U13 | U23 | |
P1 | 0.0353 (4) | 0.0392 (4) | 0.0410 (4) | −0.0034 (3) | 0.0103 (3) | −0.0044 (3) |
F1 | 0.0343 (7) | 0.0547 (7) | 0.0675 (8) | −0.0048 (5) | 0.0155 (5) | −0.0146 (6) |
F2 | 0.0586 (14) | 0.100 (2) | 0.0487 (13) | −0.0140 (13) | 0.0031 (8) | 0.0211 (12) |
F3 | 0.0463 (10) | 0.0459 (13) | 0.101 (2) | −0.0107 (7) | 0.0257 (14) | −0.0320 (11) |
F2' | 0.055 (8) | 0.13 (2) | 0.28 (4) | 0.032 (11) | 0.052 (16) | 0.16 (3) |
F3' | 0.059 (8) | 0.31 (4) | 0.117 (19) | −0.061 (17) | 0.031 (11) | −0.17 (2) |
N1 | 0.0446 (9) | 0.0352 (8) | 0.0325 (8) | −0.0022 (7) | 0.0089 (6) | −0.0015 (6) |
N2 | 0.0710 (13) | 0.0487 (11) | 0.0388 (9) | 0.0183 (9) | 0.0087 (8) | −0.0018 (8) |
C1 | 0.0425 (11) | 0.0539 (12) | 0.0380 (10) | 0.0016 (9) | 0.0091 (8) | 0.0034 (9) |
C2 | 0.0813 (17) | 0.0370 (11) | 0.0422 (11) | −0.0110 (11) | −0.0107 (10) | 0.0007 (9) |
C3 | 0.0407 (11) | 0.0527 (13) | 0.0506 (12) | −0.0064 (9) | 0.0067 (9) | 0.0048 (9) |
C4 | 0.0907 (17) | 0.0326 (10) | 0.0429 (11) | 0.0006 (10) | 0.0152 (11) | −0.0022 (9) |
C5 | 0.0699 (14) | 0.0296 (9) | 0.0378 (10) | 0.0031 (9) | 0.0084 (9) | −0.0033 (8) |
C6 | 0.0710 (15) | 0.0586 (14) | 0.0474 (12) | 0.0162 (12) | 0.0026 (10) | −0.0073 (10) |
C7 | 0.0746 (17) | 0.0755 (17) | 0.0541 (14) | 0.0086 (13) | 0.0162 (12) | −0.0162 (12) |
C8 | 0.0926 (19) | 0.0541 (13) | 0.0402 (11) | −0.0015 (12) | 0.0132 (11) | −0.0085 (10) |
C9 | 0.0926 (19) | 0.0507 (13) | 0.0441 (12) | 0.0114 (12) | −0.0068 (12) | −0.0023 (10) |
C10 | 0.0686 (15) | 0.0487 (12) | 0.0522 (12) | 0.0126 (11) | 0.0068 (11) | −0.0071 (10) |
P1—F2'i | 1.636 (8) | C2—C3 | 1.338 (3) |
P1—F2' | 1.636 (9) | C2—H2A | 0.9300 |
P1—F3' | 1.641 (9) | C3—H3 | 0.9300 |
P1—F3'i | 1.641 (9) | C4—C5 | 1.512 (3) |
P1—F2i | 1.659 (2) | C4—H4A | 0.9700 |
P1—F2 | 1.659 (2) | C4—H4B | 0.9700 |
P1—F1 | 1.6773 (11) | C5—C6 | 1.372 (3) |
P1—F1i | 1.6773 (11) | C5—C10 | 1.382 (3) |
P1—F3 | 1.679 (2) | C6—C7 | 1.383 (3) |
P1—F3i | 1.679 (2) | C6—H6 | 0.9300 |
N1—C1 | 1.312 (2) | C7—C8 | 1.367 (4) |
N1—C3 | 1.368 (3) | C7—H7 | 0.9300 |
N1—C4 | 1.471 (3) | C8—C9 | 1.366 (4) |
N2—C1 | 1.308 (3) | C8—H8 | 0.9300 |
N2—C2 | 1.355 (3) | C9—C10 | 1.384 (3) |
N2—H2 | 0.8600 | C9—H9 | 0.9300 |
C1—H1 | 0.9300 | C10—H10 | 0.9300 |
F2'i—P1—F2' | 180.0 (16) | F1—P1—F3i | 89.41 (10) |
F2'i—P1—F3' | 86.7 (15) | F1i—P1—F3i | 90.59 (10) |
F2'—P1—F3' | 93.3 (15) | F3—P1—F3i | 180.0 (2) |
F2'i—P1—F3'i | 93.3 (15) | C1—N1—C3 | 108.37 (18) |
F2'—P1—F3'i | 86.7 (15) | C1—N1—C4 | 125.90 (19) |
F3'—P1—F3'i | 180.0 (11) | C3—N1—C4 | 125.74 (18) |
F2'i—P1—F2i | 32 (2) | C1—N2—C2 | 109.05 (17) |
F2'—P1—F2i | 148 (2) | C1—N2—H2 | 125.5 |
F3'—P1—F2i | 117.8 (19) | C2—N2—H2 | 125.5 |
F3'i—P1—F2i | 62.2 (19) | N2—C1—N1 | 108.78 (18) |
F2'i—P1—F2 | 148 (2) | N2—C1—H1 | 125.6 |
F2'—P1—F2 | 32 (2) | N1—C1—H1 | 125.6 |
F3'—P1—F2 | 62.2 (19) | C3—C2—N2 | 106.97 (19) |
F3'i—P1—F2 | 117.8 (19) | C3—C2—H2A | 126.5 |
F2i—P1—F2 | 180.0 (2) | N2—C2—H2A | 126.5 |
F2'i—P1—F1 | 81.6 (6) | C2—C3—N1 | 106.84 (19) |
F2'—P1—F1 | 98.4 (6) | C2—C3—H3 | 126.6 |
F3'—P1—F1 | 88.3 (7) | N1—C3—H3 | 126.6 |
F3'i—P1—F1 | 91.7 (7) | N1—C4—C5 | 110.92 (16) |
F2i—P1—F1 | 91.13 (12) | N1—C4—H4A | 109.5 |
F2—P1—F1 | 88.87 (12) | C5—C4—H4A | 109.5 |
F2'i—P1—F1i | 98.4 (6) | N1—C4—H4B | 109.5 |
F2'—P1—F1i | 81.6 (6) | C5—C4—H4B | 109.5 |
F3'—P1—F1i | 91.7 (7) | H4A—C4—H4B | 108.0 |
F3'i—P1—F1i | 88.3 (7) | C6—C5—C10 | 119.0 (2) |
F2i—P1—F1i | 88.87 (12) | C6—C5—C4 | 119.8 (2) |
F2—P1—F1i | 91.13 (12) | C10—C5—C4 | 121.3 (2) |
F1—P1—F1i | 180.00 (9) | C5—C6—C7 | 120.5 (2) |
F2'i—P1—F3 | 59 (2) | C5—C6—H6 | 119.8 |
F2'—P1—F3 | 121 (2) | C7—C6—H6 | 119.8 |
F3'—P1—F3 | 28.2 (18) | C8—C7—C6 | 120.3 (2) |
F3'i—P1—F3 | 151.8 (18) | C8—C7—H7 | 119.8 |
F2i—P1—F3 | 89.61 (12) | C6—C7—H7 | 119.8 |
F2—P1—F3 | 90.39 (12) | C9—C8—C7 | 119.7 (2) |
F1—P1—F3 | 90.59 (10) | C9—C8—H8 | 120.2 |
F1i—P1—F3 | 89.41 (10) | C7—C8—H8 | 120.2 |
F2'i—P1—F3i | 121 (2) | C8—C9—C10 | 120.4 (2) |
F2'—P1—F3i | 59 (2) | C8—C9—H9 | 119.8 |
F3'—P1—F3i | 151.8 (18) | C10—C9—H9 | 119.8 |
F3'i—P1—F3i | 28.2 (18) | C5—C10—C9 | 120.1 (2) |
F2i—P1—F3i | 90.39 (12) | C5—C10—H10 | 119.9 |
F2—P1—F3i | 89.61 (12) | C9—C10—H10 | 119.9 |
C2—N2—C1—N1 | 0.8 (2) | N1—C4—C5—C10 | 66.8 (3) |
C3—N1—C1—N2 | −0.6 (2) | C10—C5—C6—C7 | 0.0 (4) |
C4—N1—C1—N2 | 179.22 (17) | C4—C5—C6—C7 | 179.8 (2) |
C1—N2—C2—C3 | −0.7 (2) | C5—C6—C7—C8 | −1.0 (4) |
N2—C2—C3—N1 | 0.3 (2) | C6—C7—C8—C9 | 1.6 (4) |
C1—N1—C3—C2 | 0.2 (2) | C7—C8—C9—C10 | −1.0 (4) |
C4—N1—C3—C2 | −179.65 (18) | C6—C5—C10—C9 | 0.6 (3) |
C1—N1—C4—C5 | −113.5 (2) | C4—C5—C10—C9 | −179.3 (2) |
C3—N1—C4—C5 | 66.3 (3) | C8—C9—C10—C5 | 0.0 (4) |
N1—C4—C5—C6 | −113.0 (2) |
Symmetry code: (i) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C10H11N2+·PF6−·C10H10N2 |
Mr | 462.38 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 6.6459 (4), 6.9825 (4), 22.3558 (12) |
β (°) | 97.109 (1) |
V (Å3) | 1029.45 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.20 |
Crystal size (mm) | 0.25 × 0.24 × 0.22 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.951, 0.957 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5057, 1820, 1585 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.116, 1.05 |
No. of reflections | 1820 |
No. of parameters | 162 |
No. of restraints | 2 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.46 |
Computer programs: APEX2 (Bruker, 2003), SAINT (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
This project was supported by the National Science Foundation of China (Project Grant No. 20672081) and the Natural Science Foundation of Tianjin (07JCYBJC00300).
References
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Some weak interactions in crystal engineering, such as π-π stacking interactions (Hunter & Sanders, 1990), often affect the structure of complexes, and they can link discrete sub-units or low-dimensional entities into high-dimensional supramolecular networks. The imidazole ring is a structural component of many compounds occurring in living organisms (Sundberg & Martin, 1974). In the mechanisms of the majority of enzymatic reactions, an important role is played by the formation of coordination compounds with ions (Kurdziel & Glowiak, 2000.). We are interested in imidazole compounds with π-π stacking interactions and here report the synthesis and crystal structure of 1-benzylimidazolium hexafluoridophosphate.
In the title compound, C10H10N2.C10H11N2+.F6P-, atom H2 is disordered equally between the cation and neutral molecule. The dihedral angle between the phenyl and imidazole rings is 82.6 (2)° (Fig. 1). The N1A—C1A, N1A—C3A, N2A—C1A and N2A—C2A bond distances are 1.312 (2), 1.368 (3), 1.308 (3) and 1.355 (3) Å, respectively, and the N1A—C1A—N2A bond angle is 108.78 (18)°; these values are similar to those observed in 1-(9-anthracenylmethyl)-3-ethylimidazolium iodide (Liu et al., 2003).
In the crystal structure of the title compound (Fig. 2), there are head-to-tail π-π stacking interactions between imidazole rings; the interplanar separation is 3.295 (1) Å and the centroid-to-centroid separation is 3.448 (3) Å.